CSPI04G03390 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G03390
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Far-red impaired responsive (FAR1) family protein
Location	Chr4 : 2075615 .. 2078218 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGGAGAGGGTCCGTAATTTCTCTTAAACTGACACTGAACACAACCACTCATTCCCTCTCACCTTTTCCCTTCTTCTCGCCGGCGATCTTCTTCCCCATCAACCTCCGGCCTCCACGCCCGCAAAGCTTCAAGATTCCCTCACCCGTTTCTCCATCATGCACTTTCTGTTCTAGGGTTCCTTTCCTTTCCTTTCCTTTCCCCTCTTCTCTGTTTCCTGGTGAGTGACTTCACTGATTCTCCTCTCATTGTTTTGTTTGTTTCTCTCCACAATGCCTTGCTTTCTGCCAACGTTAAATGGTCCCCATGTTCGTAACGCTCTTGTAGAAGTACGTTTTCGGGTCTAATTCGTTATCAGGTCTCGCTTTACTATGCCCAATTTTGCGGAATGGAATGTTATCCAATTTTGTCTCTTTTTTAATTTTATTCTCATTTCTCTTGGGCAATGTGCGTCTGTTGTGGGATGGGAAATGTTGATAAAACCTTCTCCCGGTAGTTTTATGTCTTGGAATTTCAATCTTTTCTTCATTTCTTGTAACTTTTGATGGGTTGTTGAGATAGAACATTGAGGCATTTGATATTTGCGGATCTGCTCTGTATAATTCACTCATATAGTTCGTTTACTCTTTCCTGCTGTTTCCATTGACTTGTATACTTTTGTAGGTGATTAATGGACTGCCAATCTAGTCACACATTTGATTCAGATGAAAGTGATATTGATATTCAGACTGAAATTTATGAGAAGGGTGGGAGTATAGACGATATTCGTAATGACTTGGATTTTTGCTTGCGTGACGATGATAAGGTAGCAGAACAATCTGTTGTTGATTTGCCTATGGATGGAGTAGAACCATACATAGGTATGGAGTTCAGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTTGGATTCACCGTTCGAATACATCATAATCGTCGTTCCCGTGTAAACAATCAGGTGATTGGTCAGGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCTAAGAAGTATGTATGCAGAAAAGACAGGATACTTCCAGCACCACCAATTACTCGAGAGGGATGTCAAGCAATGATGAGATTGGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACTAAATTTGTTAAAGATCATAATCATCTGTTACTGAGTCCTAGTAAAGTCCCATGGAAAGGATCTGGAAAAAACTTGAGCGAGGTATGTTTTAGGCTTGTTTGTTTTAATAACTAATATACTCTCCCATATGCATTTCTATGGATTATTGCCTGTCTTGTTATAATTCAGGGTGTATTGGTTTTGTTTCCTATCTTGTTGGTTATCAAACTTGCTTTATCATGACCTTACTTGAACAAGATTTGTCAATAATTTGTACAACTATGTCCTTGAGTTCAAGCTTTGCTTTGTCAGTTTGCATTAGAAAACTATTAAATCATCAAACCCTAGAATCGAACTTTTGGTTTGACAATTGTCTTTTGTGTAGAAAGAAAAGGCATTGAGGACCTTGTGGTTCTTGCTTCTTTTTTCCAACATGCTTGATGGGGTACCTTGAATTGGATTTTTCTTTGAAATTCAGATGTTGTCATCGCTACTACAGCTGCAAGATTTAGAATGAATAATTGAAATTCTAGTTTGTGTTCCTTTCCCTTTAAGTGGTAGAGTTTCTTTTATCATCAATTTTATGTTGTGTATTCTATAATACTGCCATTGTCACTTGTCGGTTGGTTAATGTAATATAAAATATCAACTTTAGGGTCAACATTTTATCAATGATTTTACATCTAACATATTTCGTGTCGAGAGGAAGCCATCTCTAGTCTATTCCCATGGTTTTGCCATAGTTTGACAGCACTATTCATTCATCTAATTGTCTAGCCAAAACCATCTTTTTCTTAAATGGATCTTCAGTTTATGTTTCTATATCAATATGATTATCTGGCATGCACCCAAACGTGTTTATTATTCTACCTTTTGACTAAATTGGTAAGAGTTAACCTTCCAGCTTTTCAGTTTGAATGGTTATGATTCTTCATTTTCTTCATATCTGGAATTCTTATTTGAAAGCATTAATGTAACCATTCTCTTGAAGCCTTTAGCTTTTATCATCTTTTATCATCTTTTATCATCTTTTATCATCTTTAGCTTTTCATCCTGCGCTTGTTCTTTCGCAGGATGAAAAGGATAAGCGGATTCGAGAGTTATCTCTGGAGTTGTACAATGAGAGGCAGAAATATAAGAGAAAATGTGCTGCATATGAAGAACAATTGAAAACAATTTGGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTAAAAAGCATTAGAGAAGTTGAGGAGGAAGAAGAATCAAAAGGTTCGAATGAAAGGTGGATTTAAATTATCATAACTGCACTAACTTATCATATATTATTATATCTTAGGTATGGGTTTTTGGTATCCAAAATTTAACTCTCATTGTAGATGGATAATGACTTCTTTGAGAAGCATTTTAGTGTATAAAGTATTTATCCATATGGCATGCTGCTTGAAATCTGGAAACTTGTGTGACCTGGCAATGACGTGGATTTTGTCA

mRNA sequence

ATGGACTGCCAATCTAGTCACACATTTGATTCAGATGAAAGTGATATTGATATTCAGACTGAAATTTATGAGAAGGGTGGGAGTATAGACGATATTCGTAATGACTTGGATTTTTGCTTGCGTGACGATGATAAGGTAGCAGAACAATCTGTTGTTGATTTGCCTATGGATGGAGTAGAACCATACATAGGTATGGAGTTCAGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTTGGATTCACCGTTCGAATACATCATAATCGTCGTTCCCGTGTAAACAATCAGGTGATTGGTCAGGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCTAAGAAGTATGTATGCAGAAAAGACAGGATACTTCCAGCACCACCAATTACTCGAGAGGGATGTCAAGCAATGATGAGATTGGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACTAAATTTGTTAAAGATCATAATCATCTGTTACTGAGTCCTAGTAAAGTCCCATGGAAAGGATCTGGAAAAAACTTGAGCGAGGATGAAAAGGATAAGCGGATTCGAGAGTTATCTCTGGAGTTGTACAATGAGAGGCAGAAATATAAGAGAAAATGTGCTGCATATGAAGAACAATTGAAAACAATTTGGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTAAAAAGCATTAGAGAAGTTGAGGAGGAAGAAGAATCAAAAGGTTCGAATGAAAGGTGGATTTAA

Coding sequence (CDS)

ATGGACTGCCAATCTAGTCACACATTTGATTCAGATGAAAGTGATATTGATATTCAGACTGAAATTTATGAGAAGGGTGGGAGTATAGACGATATTCGTAATGACTTGGATTTTTGCTTGCGTGACGATGATAAGGTAGCAGAACAATCTGTTGTTGATTTGCCTATGGATGGAGTAGAACCATACATAGGTATGGAGTTCAGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTTGGATTCACCGTTCGAATACATCATAATCGTCGTTCCCGTGTAAACAATCAGGTGATTGGTCAGGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCTAAGAAGTATGTATGCAGAAAAGACAGGATACTTCCAGCACCACCAATTACTCGAGAGGGATGTCAAGCAATGATGAGATTGGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACTAAATTTGTTAAAGATCATAATCATCTGTTACTGAGTCCTAGTAAAGTCCCATGGAAAGGATCTGGAAAAAACTTGAGCGAGGATGAAAAGGATAAGCGGATTCGAGAGTTATCTCTGGAGTTGTACAATGAGAGGCAGAAATATAAGAGAAAATGTGCTGCATATGAAGAACAATTGAAAACAATTTGGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTAAAAAGCATTAGAGAAGTTGAGGAGGAAGAAGAATCAAAAGGTTCGAATGAAAGGTGGATTTAA

Homology

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BLAST of CSPI04G03390 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 69/196 (35.20%), Postives = 104/196 (53.06%), Query Frame = 1


Query: 10  DSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDL--------------- 69
           D++  D DI   +   GG +DD   D++    DDD + +  ++                 
Sbjct: 3   DNEVLDFDIGVGV-SSGGDVDDDAIDIEHHALDDDDMLDSPIMPCGNGLVGNSGNYFPNQ 62

Query: 70  -----PMDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVC 129
                 +  +EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC
Sbjct: 63  EEEACDLLDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVC 122

Query: 130 SKEGFRAKKYVCRKDRILPAP-PITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPS 185
           +KEGFR       KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P 
Sbjct: 123 AKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPD 182

[Close]

BLAST of CSPI04G03390 vs. Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.4e-18
Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = 1


Query: 58  GVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 117
           GVEPY+G+EF + +EAREFY  Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 40  GVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 99

Query: 118 KYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLL 165
                          +R GC A +R+  RD GKW + +  K+HNH L
Sbjct: 100 ---------------SRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

[Close]

BLAST of CSPI04G03390 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.7e-17
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 1


Query: 58  GVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 117
           G+EPY+G+EF + +EAR++Y +Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 25  GLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 84

Query: 118 KYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNH 163
                          +R GC A +R+  RD GKW + +  K+HNH
Sbjct: 85  ---------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNH 114

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BLAST of CSPI04G03390 vs. Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-13
Identity = 41/123 (33.33%), Postives = 58/123 (47.15%), Query Frame = 1


Query: 59  VEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGF---- 118
           +EP  GMEF S  EA  FY  Y R +GF   I ++RRS+   + I   F CS+ G     
Sbjct: 68  LEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREY 127

Query: 119 -------RAKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSP 171
                  RA++     + +       +  C+A M +  R  GKW +  FV++HNH LL  
Sbjct: 128 DKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPA 187

[Close]

BLAST of CSPI04G03390 vs. Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-13
Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 1


Query: 35  DLDFCLRDDDKVAEQSV----------VDLPMDGVEPYIGMEFSSRDEAREFYVNYGRRV 94
           D+ FC  ++ K  E+++          VD   +   P +GMEF S D+A  +Y  Y   V
Sbjct: 49  DVGFCQNEERKSEEETMGGFDEQSGLLVDERKEFDAPAVGMEFESYDDAYNYYNCYASEV 108

Query: 95  GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCRKDRILPAPPITREGCQAMMRLA 154
           GF VR+ ++   R + +  G    CS +GF+    V R  +       TR GC AM+R+ 
Sbjct: 109 GFRVRVKNSWFKRRSKEKYGAVLCCSSQGFKRINDVNRVRK------ETRTGCPAMIRMR 168

Query: 155 LRDGGKWAVTKFVKDHNHLL 165
             D  +W V +   DHNHLL
Sbjct: 169 QVDSKRWRVVEVTLDHNHLL 182

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BLAST of CSPI04G03390 vs. TrEMBL
Match: A0A0A0KW49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015740 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 1.8e-143
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60
           MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE
Sbjct: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60

Query: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120
           PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV
Sbjct: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120

Query: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS 180
           CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS
Sbjct: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS 180

Query: 181 EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE 240
           EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE
Sbjct: 181 EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE 240

Query: 241 VEEEEESKGSNERWI 256
           VEEEEESKGSNERWI
Sbjct: 241 VEEEEESKGSNERWI 255

[Close]

BLAST of CSPI04G03390 vs. TrEMBL
Match: A0A067L5V8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20856 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.3e-98
Identity = 185/247 (74.90%), Postives = 213/247 (86.23%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSV-VDLPMDGV 60
           MD QS H FDSDESD++IQ E YE G   DD+ N+LDFC+ ++D V+EQ V + +  +G+
Sbjct: 1   MDDQSGHGFDSDESDLEIQAESYEYGRIEDDLPNNLDFCVSEEDNVSEQYVGLTINAEGL 60

Query: 61  EPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 120
           EPYIGMEF++RDEAREFY++YGR  GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY
Sbjct: 61  EPYIGMEFNTRDEAREFYISYGRCAGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 120

Query: 121 VCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNL 180
           V RKDR+LP PPITREGCQAM+RLALRDG KW VTKFVK+H H L+SPSKVPW+GSGK+L
Sbjct: 121 VYRKDRVLPPPPITREGCQAMIRLALRDGVKWVVTKFVKEHTHKLMSPSKVPWRGSGKHL 180

Query: 181 -SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSI 240
            SEDEKDKRIRELSLELYNERQK KR+CAAYEEQL  I K+LE HTE IS KV +VV+SI
Sbjct: 181 ISEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHISKKVNDVVQSI 240

Query: 241 REVEEEE 246
           RE+EEE+
Sbjct: 241 REIEEEQ 247

[Close]

BLAST of CSPI04G03390 vs. TrEMBL
Match: A0A0L9UP09_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g205300 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-95
Identity = 179/248 (72.18%), Postives = 207/248 (83.47%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMD--G 60
           MD +S   FDSD+SD+++Q EI EK   ID+   DL+ C  +D+K  E    ++P D   
Sbjct: 1   MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVEPPATEIPTDIEA 60

Query: 61  VEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120
           VEP+IGMEF+SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 121 YVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKN 180
           YV RKDR+LP PP TREGCQAM+RLALRDGGKW VTKFVK+HNH L+SPSKVPW+GSGK+
Sbjct: 121 YVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKH 180

Query: 181 L-SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKS 240
           L SEDEKD+RIRELSLELYNERQK KR+CAAYEEQL  I  +LE HTE IS KVA VV+S
Sbjct: 181 LVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRS 240

Query: 241 IREVEEEE 246
           IRE+EEE+
Sbjct: 241 IREIEEEK 248

[Close]

BLAST of CSPI04G03390 vs. TrEMBL
Match: A0A0S3SG33_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G040200 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-95
Identity = 179/248 (72.18%), Postives = 207/248 (83.47%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMD--G 60
           MD +S   FDSD+SD+++Q EI EK   ID+   DL+ C  +D+K  E    ++P D   
Sbjct: 1   MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVEPPATEIPTDIEA 60

Query: 61  VEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120
           VEP+IGMEF+SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 121 YVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKN 180
           YV RKDR+LP PP TREGCQAM+RLALRDGGKW VTKFVK+HNH L+SPSKVPW+GSGK+
Sbjct: 121 YVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKH 180

Query: 181 L-SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKS 240
           L SEDEKD+RIRELSLELYNERQK KR+CAAYEEQL  I  +LE HTE IS KVA VV+S
Sbjct: 181 LVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRS 240

Query: 241 IREVEEEE 246
           IRE+EEE+
Sbjct: 241 IREIEEEK 248

[Close]

BLAST of CSPI04G03390 vs. TrEMBL
Match: M5XFI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010254mg PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-95
Identity = 186/258 (72.09%), Postives = 216/258 (83.72%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRND-LDFCLRDDDKVAEQSVVDLPM--D 60
           MD QS H FDSDESD+D+  E YE    ++D+ ++ LD CL + + +AE S  DLPM  +
Sbjct: 1   MDHQSVHGFDSDESDLDMHAETYENNEGMEDVLSENLDLCLDEKEGIAEPSA-DLPMNIE 60

Query: 61  GVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120
            +EP IGMEF+SRDEAREFYV YGRR GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK
Sbjct: 61  ALEPNIGMEFNSRDEAREFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120

Query: 121 KYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGK 180
           KYV RKDR+LP PP+TREGCQAM+RLALRDG KW VTKFVK+HNH L+SPSKVPW+GSGK
Sbjct: 121 KYVHRKDRVLPPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLMSPSKVPWRGSGK 180

Query: 181 NL-SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVK 240
           +L SEDEKDKRIRELSLELYNERQK KR+CAAYEEQL  I K+LE HTE +S KVA++V+
Sbjct: 181 HLASEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHMSKKVADIVQ 240

Query: 241 SIREVEEEEESKGSNERW 255
           SIRE+ EEE+S+ S+  W
Sbjct: 241 SIREI-EEEQSEDSDSGW 256

[Close]

BLAST of CSPI04G03390 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-32
Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = 1


Query: 49  QSVVDLPMDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFV 108
           ++V D     VEP+IGMEF S + A+ FY NY   +GF +R+   RRS  +  V+ +  V
Sbjct: 21  KTVTDEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLV 80

Query: 109 CSKEGFRAKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPS 168
           C+KEGFR  +   R+        ITREGC+A++ +     G W VTKF K+HNH LL  S
Sbjct: 81  CNKEGFRRSRP--RRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLS 140

Query: 169 KVPWKGSGKNLSEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECIS 228
               +      + DEKD +IRELS EL  ER    R+C A ++QL  + KE+E H+  ++
Sbjct: 141 PNVRRNFQLPQTPDEKDAKIRELSAELSRER----RRCTALQQQLDMVLKEMEEHSNHLT 200

Query: 229 NKVAEVVKSIREVEEEEESK 249
             +  V++S+R++E    +K
Sbjct: 201 ININSVIQSVRDIESNTFTK 214

[Close]

BLAST of CSPI04G03390 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 134.8 bits (338), Expect = 7.5e-32
Identity = 84/213 (39.44%), Postives = 123/213 (57.75%), Query Frame = 1


Query: 40  LRDDDKVAEQSVVDLPMDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVN 99
           + D+D    ++  +     +EP  G+ F S D A+ FY +Y RR+GF +R+   RRS  +
Sbjct: 1   MEDEDDPTTKNSNNTDDFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKD 60

Query: 100 NQVIGQDFVCSKEG----FRAKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTK 159
            +++ + F C+KEG     R K    RK R     P TREGC+AM+ +     GKW +TK
Sbjct: 61  GRILARRFGCNKEGHCVSIRGKFGSVRKPR-----PSTREGCKAMIHVKYDRSGKWVITK 120

Query: 160 FVKDHNH-LLLSPSKVPWKGSGKNLSEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLK 219
           FVK+HNH L++SP +          + DEKDKRI+EL++EL N+    KR CAAY+EQL 
Sbjct: 121 FVKEHNHPLVVSPREA-------RHTLDEKDKRIQELTIELRNK----KRLCAAYKEQLD 180

Query: 220 TIWKELEMHTECISNKVAEVVKSIREVEEEEES 248
              K +E H+  I+ KV  VV +++E E  E +
Sbjct: 181 AFAKIVEEHSNQIAKKVENVVNNLKEFEHLEHA 197

[Close]

BLAST of CSPI04G03390 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 125.2 bits (313), Expect = 5.9e-29
Identity = 80/237 (33.76%), Postives = 130/237 (54.85%), Query Frame = 1


Query: 13  ESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLP-MDGVEPYIGMEFSSRD 72
           E D D   E+ E  G  D+ + DLD            +V D+    G EPY+G EF S  
Sbjct: 30  EQDDDNHNELGENSGEQDE-KVDLDSI--------PLAVADMTEAQGDEPYVGQEFESEA 89

Query: 73  EAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCRKDRILPAPP 132
            A  FY  Y  +VGF +R+    RSR +   IG+  VC+KEG+R      ++D+++    
Sbjct: 90  AAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPS---KRDKVIRQRA 149

Query: 133 ITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLSEDEKDKRIREL 192
            TR GC+AM+ +   + GKW +TKFVK+HNH L+ P +V  +G   +   +E DK I+EL
Sbjct: 150 ETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM-PGRVR-RGCIYDQYPNEHDK-IQEL 209

Query: 193 SLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIREVEEEEESK 249
             +L  E    K++ A Y+  L+ +++++E H E +S ++  +V ++R +E+ +  +
Sbjct: 210 MQQLAAE----KKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLEQRDHQQ 247

[Close]

BLAST of CSPI04G03390 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 119.4 bits (298), Expect = 3.2e-27
Identity = 69/196 (35.20%), Postives = 104/196 (53.06%), Query Frame = 1


Query: 10  DSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDL--------------- 69
           D++  D DI   +   GG +DD   D++    DDD + +  ++                 
Sbjct: 3   DNEVLDFDIGVGV-SSGGDVDDDAIDIEHHALDDDDMLDSPIMPCGNGLVGNSGNYFPNQ 62

Query: 70  -----PMDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVC 129
                 +  +EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC
Sbjct: 63  EEEACDLLDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVC 122

Query: 130 SKEGFRAKKYVCRKDRILPAP-PITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPS 185
           +KEGFR       KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P 
Sbjct: 123 AKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPD 182

[Close]

BLAST of CSPI04G03390 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 64/190 (33.68%), Postives = 113/190 (59.47%), Query Frame = 1


Query: 53  DLPMDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKE 112
           DL +D  EPY+G++F S +EA++FYV Y +R+GF VR+   RRS ++ + + +   C+K+
Sbjct: 4   DLKLD--EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQ 63

Query: 113 GFRAKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPW 172
           GF          R   +   +REGC+A + + +   GKW VT+F+K+HNH L       +
Sbjct: 64  GFGP-----NNQRSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL------QF 123

Query: 173 KGSGKNLSEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVA 232
            GS    S  +K+++I+EL+ E+    +   R C  Y ++L +    +E +TE +S KV 
Sbjct: 124 IGSSSYDSFADKERKIKELTEEI----ECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVR 176

Query: 233 EVVKSIREVE 243
           ++V++++++E
Sbjct: 184 DIVENVKKLE 176

[Close]

BLAST of CSPI04G03390 vs. NCBI nr
Match: gi|449468782|ref|XP_004152100.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 516.5 bits (1329), Expect = 2.6e-143
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60
           MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE
Sbjct: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60

Query: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120
           PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV
Sbjct: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120

Query: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS 180
           CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS
Sbjct: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS 180

Query: 181 EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE 240
           EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE
Sbjct: 181 EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE 240

Query: 241 VEEEEESKGSNERWI 256
           VEEEEESKGSNERWI
Sbjct: 241 VEEEEESKGSNERWI 255

[Close]

BLAST of CSPI04G03390 vs. NCBI nr
Match: gi|659108020|ref|XP_008453975.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo])

HSP 1 Score: 506.5 bits (1303), Expect = 2.7e-140
Identity = 251/255 (98.43%), Postives = 252/255 (98.82%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60
           MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVD PMDGVE
Sbjct: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDFPMDGVE 60

Query: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120
           PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV
Sbjct: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120

Query: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS 180
           CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS
Sbjct: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLS 180

Query: 181 EDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIRE 240
           EDEKDKRIR+LSLELYNERQKYKRKCAAYEEQLKTI KELEMHTECISNKVAEVVKSIRE
Sbjct: 181 EDEKDKRIRDLSLELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEVVKSIRE 240

Query: 241 VEEEEESKGSNERWI 256
           VEEEEESKG NERWI
Sbjct: 241 VEEEEESKGLNERWI 255

[Close]

BLAST of CSPI04G03390 vs. NCBI nr
Match: gi|1009139170|ref|XP_015886981.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ziziphus jujuba])

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 190/258 (73.64%), Postives = 218/258 (84.50%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDD-IRNDLDFCLRDDDKVAEQSVVDLPMDG- 60
           MD QS H FDSDESD+DIQ E ++K   IDD +  +L  C+ D +K AEQS+ +L M+  
Sbjct: 1   MDNQSGHEFDSDESDLDIQAETFKKHEEIDDPLSQNLGLCIGDGEKAAEQSIGNLAMNAE 60

Query: 61  -VEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120
            +EPYIGMEF+SRDEAREFYV YGRR GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK
Sbjct: 61  TLEPYIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120

Query: 121 KYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGK 180
           KYV RKDR+LP PPITREGCQAM+RLALRDG KW VTKFVK+HNH L+SPSKVPW+GSGK
Sbjct: 121 KYVYRKDRVLPPPPITREGCQAMIRLALRDGMKWVVTKFVKEHNHKLMSPSKVPWRGSGK 180

Query: 181 NL-SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVK 240
           +L SEDEKDKRIRELSLELYNERQK KR+CAAYEEQL  I K+LE HTE ISNKVA++V+
Sbjct: 181 HLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNAILKDLEKHTEHISNKVADIVQ 240

Query: 241 SIREVEEEEESKGSNERW 255
           SI+ + EEE+S+ S+  W
Sbjct: 241 SIKTI-EEEQSEDSDSGW 257

[Close]

BLAST of CSPI04G03390 vs. NCBI nr
Match: gi|802554950|ref|XP_012065173.1| (PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Jatropha curcas])

HSP 1 Score: 366.7 bits (940), Expect = 3.3e-98
Identity = 185/247 (74.90%), Postives = 213/247 (86.23%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSV-VDLPMDGV 60
           MD QS H FDSDESD++IQ E YE G   DD+ N+LDFC+ ++D V+EQ V + +  +G+
Sbjct: 1   MDDQSGHGFDSDESDLEIQAESYEYGRIEDDLPNNLDFCVSEEDNVSEQYVGLTINAEGL 60

Query: 61  EPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 120
           EPYIGMEF++RDEAREFY++YGR  GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY
Sbjct: 61  EPYIGMEFNTRDEAREFYISYGRCAGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 120

Query: 121 VCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNL 180
           V RKDR+LP PPITREGCQAM+RLALRDG KW VTKFVK+H H L+SPSKVPW+GSGK+L
Sbjct: 121 VYRKDRVLPPPPITREGCQAMIRLALRDGVKWVVTKFVKEHTHKLMSPSKVPWRGSGKHL 180

Query: 181 -SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSI 240
            SEDEKDKRIRELSLELYNERQK KR+CAAYEEQL  I K+LE HTE IS KV +VV+SI
Sbjct: 181 ISEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHISKKVNDVVQSI 240

Query: 241 REVEEEE 246
           RE+EEE+
Sbjct: 241 REIEEEQ 247

[Close]

BLAST of CSPI04G03390 vs. NCBI nr
Match: gi|645263482|ref|XP_008237257.1| (PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Prunus mume])

HSP 1 Score: 358.6 bits (919), Expect = 9.0e-96
Identity = 187/258 (72.48%), Postives = 216/258 (83.72%), Query Frame = 1


Query: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRND-LDFCLRDDDKVAEQSVVDLPM--D 60
           MD QS H FDSDESD+D+  E YE    ++D+ ++ LD CL + D +AE S  DLPM  +
Sbjct: 1   MDHQSVHGFDSDESDLDMHAETYENNEGMEDVLSENLDLCLDEKDGIAEPSA-DLPMNIE 60

Query: 61  GVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120
            +EP IGMEF+SRDEAREFYV YGRR GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK
Sbjct: 61  ALEPNIGMEFNSRDEAREFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120

Query: 121 KYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGK 180
           KYV RKDR+LP PP+TREGCQAM+RLALRDG KW VTKFVK+HNH L+SPSKVPW+GSGK
Sbjct: 121 KYVHRKDRVLPPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLMSPSKVPWRGSGK 180

Query: 181 NL-SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVK 240
           +L SEDEKDKRIRELSLELYNERQK KR+CAAYEEQL  I K+LE HTE +S KVA++V+
Sbjct: 181 HLASEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHMSKKVADIVQ 240

Query: 241 SIREVEEEEESKGSNERW 255
           SIRE+ EEE+S+ S+  W
Sbjct: 241 SIREI-EEEQSEDSDSGW 256

The following BLAST results are available for this feature:

BLAST of CSPI04G03390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FRS5_ARATH	5.8e-26	35.20	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	[more]
FRS12_ARATH	4.4e-18	43.93	Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1	[more]
FRS7_ARATH	3.7e-17	40.95	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1	[more]
FHY3_ARATH	3.3e-13	33.33	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1	[more]
FRS6_ARATH	5.6e-13	32.86	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1	[more]

BLAST of CSPI04G03390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW49_CUCSA	1.8e-143	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015740 PE=4 SV=1	[more]
A0A067L5V8_JATCU	2.3e-98	74.90	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20856 PE=4 SV=1	[more]
A0A0L9UP09_PHAAN	1.8e-95	72.18	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g205300 PE=4 SV=1	[more]
A0A0S3SG33_PHAAN	1.8e-95	72.18	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G040200 PE=...	[more]
M5XFI8_PRUPE	1.8e-95	72.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010254mg PE=4 SV=1	[more]

BLAST of CSPI04G03390 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07500.1	3.4e-32	39.00	Far-red impaired responsive (FAR1) family protein	[more]
AT2G43280.1	7.5e-32	39.44	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	5.9e-29	33.76	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	3.2e-27	35.20	FAR1-related sequence 5	[more]
AT4G12850.1	1.2e-26	33.68	Far-red impaired responsive (FAR1) family protein	[more]

BLAST of CSPI04G03390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468782\|ref\|XP_004152100.1\|	2.6e-143	100.00	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus]	[more]
gi\|659108020\|ref\|XP_008453975.1\|	2.7e-140	98.43	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo]	[more]
gi\|1009139170\|ref\|XP_015886981.1\|	1.1e-98	73.64	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ziziphus jujuba]	[more]
gi\|802554950\|ref\|XP_012065173.1\|	3.3e-98	74.90	PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Jatropha curcas]	[more]
gi\|645263482\|ref\|XP_008237257.1\|	9.0e-96	72.48	PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004330	FAR1_DNA_bnd_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G03390.1	CSPI04G03390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 75..165 score: 2.9
None	No IPR available	unknown	Coil	Coil	coord: 192..212 scor
None	No IPR available	PANTHER	PTHR31669:SF31	SUBFAMILY NOT NAMED	coord: 1..245 score: 9.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G03390	Cla010840	Watermelon (97103) v1	cpiwmB310
CSPI04G03390	Csa4G015740	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G03390	ClCG07G015710	Watermelon (Charleston Gray)	cpiwcgB346
CSPI04G03390	CsaV3_4G003380	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G03390	Cla97C07G142740	Watermelon (97103) v2	cpiwmbB336
CSPI04G03390	Bhi01G002095	Wax gourd	cpiwgoB374
CSPI04G03390	Bhi01G002050	Wax gourd	cpiwgoB377
CSPI04G03390	Cucsa.094760	Cucumber (Gy14) v1	cgycpiB103
CSPI04G03390	CmaCh06G016440	Cucurbita maxima (Rimu)	cmacpiB849
CSPI04G03390	CmoCh06G016460	Cucurbita moschata (Rifu)	cmocpiB832
CSPI04G03390	Cp4.1LG08g05830	Cucurbita pepo (Zucchini)	cpecpiB871
CSPI04G03390	CsGy4G003280	Cucumber (Gy14) v2	cgybcpiB168

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G03390	Watermelon (97103) v2	cpiwmbB327
CSPI04G03390	Wax gourd	cpiwgoB379
CSPI04G03390	Cucurbita moschata (Rifu)	cmocpiB250
CSPI04G03390	Cucurbita maxima (Rimu)	cmacpiB263
CSPI04G03390	Cucurbita maxima (Rimu)	cmacpiB268
CSPI04G03390	Cucurbita maxima (Rimu)	cmacpiB850
CSPI04G03390	Cucurbita moschata (Rifu)	cmocpiB833
CSPI04G03390	Cucumber (Chinese Long) v2	cpicuB185
CSPI04G03390	Melon (DHL92) v3.5.1	cpimeB302
CSPI04G03390	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G03390	Melon (DHL92) v3.5.1	cpimeB321
CSPI04G03390	Watermelon (Charleston Gray)	cpiwcgB337
CSPI04G03390	Watermelon (97103) v1	cpiwmB316
CSPI04G03390	Cucurbita pepo (Zucchini)	cpecpiB617
CSPI04G03390	Bottle gourd (USVL1VR-Ls)	cpilsiB303
CSPI04G03390	Bottle gourd (USVL1VR-Ls)	cpilsiB313
CSPI04G03390	Melon (DHL92) v3.6.1	cpimedB296
CSPI04G03390	Melon (DHL92) v3.6.1	cpimedB301
CSPI04G03390	Silver-seed gourd	carcpiB0223
CSPI04G03390	Silver-seed gourd	carcpiB0730
CSPI04G03390	Cucumber (Chinese Long) v3	cpicucB218