Carg15479 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15479
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein FAR1-RELATED SEQUENCE like
Location	Cucurbita_argyrosperma_scaffold_069 : 369122 .. 371840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTACTCACTAATTCCTTCTTCATTCTCACCCTCTCCCTTCTTCCCGCCGATCGATCAACCGCTTCTGCCGACGACCTTCTTCCCCTTCATTTTCCGGCACCCATGGCCCAAGACCTTCCGGATTCCCCCACCCATTTCTCCATCATGCGCCCTCTGATCTAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGTAAGCGTCTTCATTCATTCCTTTCTTTTCTCTTTTTTTACACAATGCCTTACTCTCTGCCAACATAAATGCCGCACATTTTCGTAACGCTCTTGTAGAAGTGGGTTTTCGAGTCTAAATCGTCATTGGGTCTCGCTTTACTATGCCCAATTTGGCAGAGTGTTATCTTTTTTTGTCTTTTTTGTGCTTTCATTTCATTTCCCTATATATTTTGGCACAATGTGCGTCTGTTGGTGGGTGGGATACGTTGATGCCTTGAAAGTTTTTGAAATTTTTCTTCATTTCTTGCAATTTTTTATGGGTTATTGACATGGAACAACGACGCTCTTGATATTTGGGGATCTTCTGTGTATAATTCCTTCATATAGTTTGGTGTTTACTTTGATTGAAGCTTGGCTATATACTTCCTGTAGGAGAGTAATGGATTGTCCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGTATGTTTGAGACTTGTTTTGTTCTTTTTTACATAACTAATATGCATTTCTATAGACAATGTCCATACTTGTCATAGTTCATGGTTTTCTATAGACAATATCAGGCTTGCTTTGTCAGATTGCATCAGAATACTTTTCAATCATCAAACTCTAGTGTCGAGTTTTTGGTTTGATAATTTCTGTTCATGTTGAAAGAAGGGATGTTCACTTTTAAGCCCATGTGTAATAGCCCAAGCCTACCTCTAGTAGATATTGTTCGTTTTGATTCGTTACATAGCACCGTCAACCTCATGGTTTTAAAATACGTATACTAGGGAGAGGTTTCCATACCCTTATGAAGGACGATTCGTTCCCTTCTCCAACTGATATGGGATCTCACAATCCACCCCCCTTCGAGGCCCAGCTTCTTTGTTGGCATTCGTTCCCTTCTTCAACTGATGTGAGATCTCACAATCCACCCTCCTTCGGAGTCTAGCATCCTCGCTGGCACACCACCTGATGTCTAGTTTTTATACCATTTGTAACAACCCAAACCCACCGCTAGCAGATATTATTCGCTTTGGCTCCTTATGTATCGTCGTCAGCCTGACGATTTTAAAACGTGTCTTCTTGGGAGAGGTTTCCACTCCCTTATAAAAAATGATGTGTTCCCCTATCTAACCGATATGGGATCACACAATGTATGGTACATTCCTTTTAGTTCTTACTCATTTTCTCCATCATGCTTGATGGGGTACCATGAATTGGATTTTCTTTCTGCAATTTACTTGTTGTCAAGGCTATTACGACTGCACGACGTAGAACGAACAATTACCATTCTAGTTTGTGTTCTTTTCGCCTCAACTGGTGAATTTATGCAATCATCAACTTTTTGGTGGGTGTGCTATAATATAGCCATGGTCGTCCGTGGGCAATTGTATTCGGAAACATCAAGTTTAGTCAAAAGAAATAGATAGATAGCATTCCATCTTCAGTTTAAATGGTTTTCATTTTCTTCATATCTGGAATTCTTATTCGAAACCTATCAAATTTGTTGTGTTTACAACCACATTCTTGATGCACGTAGCTTTGATCATTTTTCGGATACACATGAATTCATTCGAGTTGATAAGTTGGCATCGGCCGTGCGTTCGTTTTGTTTTGCAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAGATTGTCACAACTGCACTAACTTATTTTAGATGGGATAATGACTTTGAAGCTTTCATTTTTTTTTGTTCAAGGAGCCAAATGTTAACTCACATATTGTAGATGGATATTGACTTCTTTGAGGAGAATTTCAGTGTATAAAGTATTTATCCTTGTTGGAATGACACTTGGCATTTGAAAACTT

mRNA sequence

TCAGTACTCACTAATTCCTTCTTCATTCTCACCCTCTCCCTTCTTCCCGCCGATCGATCAACCGCTTCTGCCGACGACCTTCTTCCCCTTCATTTTCCGGCACCCATGGCCCAAGACCTTCCGGATTCCCCCACCCATTTCTCCATCATGCGCCCTCTGATCTAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGAGAGTAATGGATTGTCCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAGATTGTCACAACTGCACTAACTTATTTTAGATGGGATAATGACTTTGAAGCTTTCATTTTTTTTTGTTCAAGGAGCCAAATGTTAACTCACATATTGTAGATGGATATTGACTTCTTTGAGGAGAATTTCAGTGTATAAAGTATTTATCCTTGTTGGAATGACACTTGGCATTTGAAAACTT

Coding sequence (CDS)

ATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAG

Protein sequence

MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSIREVEDEEHSGGLNQGWV

Homology

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BLAST of Carg15479 vs. NCBI nr
Match: XP_022932719.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 1.4e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGGLNQGWV
Sbjct: 236 VKSIREVEDEEHSGGLNQGWV 256

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BLAST of Carg15479 vs. NCBI nr
Match: XP_023539030.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 6.8e-111
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVEDEEHSGG NQGWV
Sbjct: 236 VKSIREVEDEEHSGGWNQGWV 256

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BLAST of Carg15479 vs. NCBI nr
Match: XP_022972112.1 (protein FAR1-RELATED SEQUENCE 5-like [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-110
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDGAEPYIGMEFGSRDEAREFYVNYGR VGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGAEPYIGMEFGSRDEAREFYVNYGRHVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV
Sbjct: 176 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           +KSIREVEDEEHSGGLNQGWV
Sbjct: 236 MKSIREVEDEEHSGGLNQGWV 256

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BLAST of Carg15479 vs. NCBI nr
Match: XP_022145121.1 (protein FAR1-RELATED SEQUENCE 5-like [Momordica charantia] >XP_022145122.1 protein FAR1-RELATED SEQUENCE 5-like [Momordica charantia])

HSP 1 Score: 393.3 bits (1009), Expect = 5.0e-106
Identity = 188/201 (93.53%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           +DG EPYIGMEFGSRDEAREFYVNYGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  VDGVEPYIGMEFGSRDEAREFYVNYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKNLL EDEKDKRIRELS+ELYNE+QKCKRKCAAYEEQLKA+LKELE HTECISNKVAEV
Sbjct: 176 GKNLLGEDEKDKRIRELSVELYNERQKCKRKCAAYEEQLKAILKELETHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIRE+E+EE SGGLNQGW+
Sbjct: 236 VKSIREIEEEEESGGLNQGWI 256

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BLAST of Carg15479 vs. NCBI nr
Match: XP_008453975.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 1.4e-100
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDG EPYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKN L+EDEKDKRIR+LSLELYNE+QK KRKCAAYEEQLK +LKELEMHTECISNKVAEV
Sbjct: 176 GKN-LSEDEKDKRIRDLSLELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVE+EE S GLN+ W+
Sbjct: 236 VKSIREVEEEEESKGLNERWI 255

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BLAST of Carg15479 vs. TAIR10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33
Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEG----FR 64
           EP  G+ F S D A+ FY +Y RR+GF +R+   RRS  + +++ + F C+KEG     R
Sbjct: 21  EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80

Query: 65  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNH-LLLSPSKVPWRG 124
            K    RK R     P TREGC+AMI +     GKW +TKFVK+HNH L++SP +     
Sbjct: 81  GKFGSVRKPR-----PSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARH-- 140

Query: 125 SGKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAE 184
                 T DEKDKRI+EL++EL N+    KR CAAY+EQL A  K +E H+  I+ KV  
Sbjct: 141 ------TLDEKDKRIQELTIELRNK----KRLCAAYKEQLDAFAKIVEEHSNQIAKKVEN 197

Query: 185 VVKSIREVEDEEHS 194
           VV +++E E  EH+
Sbjct: 201 VVNNLKEFEHLEHA 197

[Close]

BLAST of Carg15479 vs. TAIR10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 137.9 bits (346), Expect = 6.9e-33
Identity = 81/187 (43.32%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGF---RA 64
           EP+IGMEF S + A+ FY NY   +GF +R+   RRS  +  V+ +  VC+KEGF   R 
Sbjct: 32  EPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRSRP 91

Query: 65  KKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSG 124
           ++  SRK R      ITREGC+A+I +     G W VTKF K+HNH LL P     R + 
Sbjct: 92  RRSESRKPR-----AITREGCKALIVVKREKSGTWLVTKFEKEHNHPLL-PLSPNVRRNF 151

Query: 125 KNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVV 184
           +   T DEKD +IRELS EL  E    +R+C A ++QL  VLKE+E H+  ++  +  V+
Sbjct: 152 QLPQTPDEKDAKIRELSAELSRE----RRRCTALQQQLDMVLKEMEEHSNHLTININSVI 208

Query: 185 KSIREVE 189
           +S+R++E
Sbjct: 212 QSVRDIE 208

[Close]

BLAST of Carg15479 vs. TAIR10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-29
Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G EF S   A  FY  Y  +VGF +R+    RSR +   IG+  VC+KEG+R  
Sbjct: 67  GDEPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLP 126

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGK 122
              S++D+++     TR GC+AMI +   + GKW +TKFVK+HNH L+ P +V  RG   
Sbjct: 127 ---SKRDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM-PGRVR-RGCIY 186

Query: 123 NLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVK 182
           +    +E DK I+EL  +L  E    K++ A Y+  L+ + +++E H E +S ++  +V 
Sbjct: 187 DQY-PNEHDK-IQELMQQLAAE----KKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVD 245

Query: 183 SIREVEDEEH 193
           ++R +E  +H
Sbjct: 247 NVRNLEQRDH 245

[Close]

BLAST of Carg15479 vs. TAIR10
Match: AT4G38180.1 (FAR1-related sequence 5)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 64
           EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC+KEGFR    
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 65  VSRKDRILPAP-PITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKV 116
              KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P +V
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQV 183

[Close]

BLAST of Carg15479 vs. TAIR10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 112.1 bits (279), Expect = 4.1e-25
Identity = 62/185 (33.51%), Postives = 108/185 (58.38%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 64
           EPY+G++F S +EA++FYV Y +R+GF VR+   RRS ++ + + +   C+K+GF     
Sbjct: 9   EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFG---- 68

Query: 65  VSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNL 124
                         REGC+A I + +   GKW VT+F+K+HNH L       + GS    
Sbjct: 69  -PNNQXXXXXXXXXREGCKATILVKMEKSGKWVVTRFIKEHNHSL------QFIGSSSYD 128

Query: 125 LTEDEKDKRIRELSLELYNEKQKCK-RKCAAYEEQLKAVLKELEMHTECISNKVAEVVKS 184
              D K+++I+EL+ E+     +C+ R C  Y ++L + +  +E +TE +S KV ++V++
Sbjct: 129 SFAD-KERKIKELTEEI-----ECQDRLCDVYRDRLVSFIDNVEHYTEELSLKVRDIVEN 176

Query: 185 IREVE 189
           ++++E
Sbjct: 189 VKKLE 176

[Close]

BLAST of Carg15479 vs. Swiss-Prot
Match: sp|Q9SZL8|FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.9e-25
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 64
           EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC+KEGFR    
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 65  VSRKDRILPAP-PITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKV 116
              KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P +V
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQV 183

[Close]

BLAST of Carg15479 vs. Swiss-Prot
Match: sp|Q3E7I5|FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-18
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G+EF + +EAREFY  Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 40  GVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 99

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLL 110
                          +R GC A IR+  RD GKW + +  K+HNH L
Sbjct: 100 ---------------SRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

[Close]

BLAST of Carg15479 vs. Swiss-Prot
Match: sp|Q9M8J3|FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 3   GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 62
           G EPY+G+EF + +EAR++Y +Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 25  GLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 84

Query: 63  KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNH 108
                          +R GC A IR+  RD GKW + +  K+HNH
Sbjct: 85  ---------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNH 114

[Close]

BLAST of Carg15479 vs. Swiss-Prot
Match: sp|Q9ZVC9|FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-15
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 4   AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 63
           AEP +GMEF S  EA+ FY  Y R++GFT ++      R +  V  ++FVCS    R+K+
Sbjct: 47  AEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL----LPRTDGSVSVREFVCSSSSKRSKR 106

Query: 64  YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLS 112
            +S             E C AM+R+ L+   KW VTKFVK+H H L S
Sbjct: 107 RLS-------------ESCDAMVRIELQGHEKWVVTKFVKEHTHGLAS 137

[Close]

BLAST of Carg15479 vs. Swiss-Prot
Match: sp|Q9LIE5|FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13
Identity = 40/122 (32.79%), Postives = 57/122 (46.72%), Query Frame = 0


Query: 5   EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGF----- 64
           EP  GMEF S  EA  FY  Y R +GF   I ++RRS+   + I   F CS+ G      
Sbjct: 69  EPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYD 128

Query: 65  ------RAKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPS 116
                 RA++     + +       +  C+A + +  R  GKW +  FV++HNH LL   
Sbjct: 129 KSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPAQ 188

[Close]

BLAST of Carg15479 vs. TrEMBL
Match: tr|A0A1S3BX14|A0A1S3BX14_CUCME (protein FAR1-RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103494535 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 9.4e-101
Identity = 183/201 (91.04%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDG EPYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKN L+EDEKDKRIR+LSLELYNE+QK KRKCAAYEEQLK +LKELEMHTECISNKVAEV
Sbjct: 176 GKN-LSEDEKDKRIRDLSLELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVE+EE S GLN+ W+
Sbjct: 236 VKSIREVEEEEESKGLNERWI 255

[Close]

BLAST of Carg15479 vs. TrEMBL
Match: tr|A0A0A0KW49|A0A0A0KW49_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015740 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.0e-99
Identity = 182/201 (90.55%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           MDG EPYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 56  MDGVEPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 115

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GS
Sbjct: 116 AKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGS 175

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GKN L+EDEKDKRIRELSLELYNE+QK KRKCAAYEEQLK + KELEMHTECISNKVAEV
Sbjct: 176 GKN-LSEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEV 235

Query: 181 VKSIREVEDEEHSGGLNQGWV 202
           VKSIREVE+EE S G N+ W+
Sbjct: 236 VKSIREVEEEEESKGSNERWI 255

[Close]

BLAST of Carg15479 vs. TrEMBL
Match: tr|A0A2C9VZJ4|A0A2C9VZJ4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G043100 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.5e-87
Identity = 154/190 (81.05%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 2   DGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRA 61
           +G EPY+GMEF SRDEAREFY++YGRR GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRA
Sbjct: 58  EGLEPYVGMEFKSRDEAREFYISYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRA 117

Query: 62  KKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSG 121
           KKYV RKDR+LP PP+TREGCQAMIRLALRDG KW VTKFVK+H H L+SP+KVPWRGSG
Sbjct: 118 KKYVYRKDRVLPPPPVTREGCQAMIRLALRDGVKWVVTKFVKEHTHKLMSPNKVPWRGSG 177

Query: 122 KNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVV 181
           K+L++EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL  +LK+LE HTE +S KVA+VV
Sbjct: 178 KHLISEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILKDLEQHTEHVSKKVADVV 237

Query: 182 KSIREVEDEE 192
           +SIRE+E+E+
Sbjct: 238 QSIREIEEEQ 247

[Close]

BLAST of Carg15479 vs. TrEMBL
Match: tr|V7BZ97|V7BZ97_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G152800g PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.9e-87
Identity = 155/191 (81.15%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           ++  EP+IGMEF SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 58  IEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 117

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDR+LP PP TREGCQAMIRLALRDGGKW VTKFVK+HNH L+SPSKVPWRGS
Sbjct: 118 AKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGS 177

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GK+L++EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL  +L +LE HTE IS KVA V
Sbjct: 178 GKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVAAV 237

Query: 181 VKSIREVEDEE 192
           V+SIRE+E+E+
Sbjct: 238 VRSIREIEEEK 248

[Close]

BLAST of Carg15479 vs. TrEMBL
Match: tr|M5XFI8|M5XFI8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G195700 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 159/200 (79.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 60
           ++  EP IGMEF SRDEAREFYV YGRR GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR
Sbjct: 58  IEALEPNIGMEFNSRDEAREFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFR 117

Query: 61  AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGS 120
           AKKYV RKDR+LP PP+TREGCQAMIRLALRDG KW VTKFVK+HNH L+SPSKVPWRGS
Sbjct: 118 AKKYVHRKDRVLPPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLMSPSKVPWRGS 177

Query: 121 GKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEV 180
           GK+L +EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL  +LK+LE HTE +S KVA++
Sbjct: 178 GKHLASEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHMSKKVADI 237

Query: 181 VKSIREVEDEEHSGGLNQGW 201
           V+SIRE+E EE S   + GW
Sbjct: 238 VQSIREIE-EEQSEDSDSGW 256

The following BLAST results are available for this feature:

BLAST of Carg15479 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932719.1	1.4e-111	100.00	protein FAR1-RELATED SEQUENCE 5-like [Cucurbita moschata]	[more]
XP_023539030.1	6.8e-111	99.50	protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972112.1	1.2e-110	99.00	protein FAR1-RELATED SEQUENCE 5-like [Cucurbita maxima]	[more]
XP_022145121.1	5.0e-106	93.53	protein FAR1-RELATED SEQUENCE 5-like [Momordica charantia] >XP_022145122.1 prote...	[more]
XP_008453975.1	1.4e-100	91.04	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo]	[more]

BLAST of Carg15479 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43280.1	1.4e-33	44.33	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	6.9e-33	43.32	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	2.1e-29	37.89	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	2.2e-26	48.21	FAR1-related sequence 5	[more]
AT4G12850.1	4.1e-25	33.51	Far-red impaired responsive (FAR1) family protein	[more]

BLAST of Carg15479 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZL8\|FRS5_ARATH	3.9e-25	48.21	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=...	[more]
sp\|Q3E7I5\|FRS12_ARATH	6.0e-18	43.93	Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 S...	[more]
sp\|Q9M8J3\|FRS7_ARATH	2.3e-17	41.90	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=...	[more]
sp\|Q9ZVC9\|FRS3_ARATH	2.8e-15	40.74	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana OX=3702 GN=FRS3 PE=1 SV=...	[more]
sp\|Q9LIE5\|FHY3_ARATH	5.8e-13	32.79	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]

BLAST of Carg15479 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BX14\|A0A1S3BX14_CUCME	9.4e-101	91.04	protein FAR1-RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103494535 PE=...	[more]
tr\|A0A0A0KW49\|A0A0A0KW49_CUCSA	1.0e-99	90.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015740 PE=4 SV=1	[more]
tr\|A0A2C9VZJ4\|A0A2C9VZJ4_MANES	3.5e-87	81.05	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G043100 PE=4 SV=...	[more]
tr\|V7BZ97\|V7BZ97_PHAVU	5.9e-87	81.15	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G152800g PE=4 ...	[more]
tr\|M5XFI8\|M5XFI8_PRUPE	1.3e-86	79.50	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G195700 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR031052	FHY3/FAR1
IPR004330	FAR1_DNA_bnd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15479-RA	Carg15479-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	PANTHER	PTHR31669:SF83	SUBFAMILY NOT NAMED	coord: 3..192
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 20..110 e-value: 1.4E-26 score: 92.9
IPR031052	FHY3/FAR1 family	PANTHER	PTHR31669	FAMILY NOT NAMED	coord: 3..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15479	Cla010840	Watermelon (97103) v1	carwmB0690
Carg15479	ClCG07G015710	Watermelon (Charleston Gray)	carwcgB0670
Carg15479	Cucsa.094760	Cucumber (Gy14) v1	carcgyB0774
Carg15479	CmaCh06G016440	Cucurbita maxima (Rimu)	carcmaB0974
Carg15479	CmoCh06G016460	Cucurbita moschata (Rifu)	carcmoB0947
Carg15479	Lsi07G000530	Bottle gourd (USVL1VR-Ls)	carlsiB634
Carg15479	Cp4.1LG08g05830	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15479	Cla97C07G142740	Watermelon (97103) v2	carwmbB0722
Carg15479	Bhi01G002095	Wax gourd	carwgoB0816

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15479	Silver-seed gourd	carcarB231
Carg15479	Cucumber (Gy14) v2	carcgybB0693
Carg15479	Cucumber (Gy14) v1	carcgyB0775
Carg15479	Cucurbita maxima (Rimu)	carcmaB0972
Carg15479	Cucurbita moschata (Rifu)	carcmoB0946
Carg15479	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15479	Wild cucumber (PI 183967)	carcpiB0730
Carg15479	Cucumber (Chinese Long) v2	carcuB0716
Carg15479	Cucumber (Chinese Long) v3	carcucB0733
Carg15479	Melon (DHL92) v3.5.1	carmeB0694
Carg15479	Melon (DHL92) v3.6.1	carmedB0707