CmoCh06G014460 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G014460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(AWPM-19-like protein) (Plasma membrane associated protein-like)
Location	Cmo_Chr06 : 10462404 .. 10463956 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATGTCCCTTTATATCCATCTATCTTATGAGCTCAGGGCAAGGAGGTGACTTTCATTCTCTCTCGTTCTCTTTCTTGGCTTCTCTAAGCTCCAAAAATCCATGGCTACTCAAGTGCGATCTGCAGTTTCCGTCCTTCTAGTTCTTAATCTCGTACTCTACTTCATCATCACTGTCATTGCTTCGTGGGCGGTAAATCACGCGTTGGAGAAGTCTTTCGAATCAGGTAACTTTCGACTCACGTCTCCAACTTTATCAACCATATACAACAAATCAGAATGTTAGTAGTAAGTTTGGGTCTCTCTAAATGTTCTTTTTGTATGAATTTGTAGCATCGACGTTGGCACTGCCAGCCCACTTGTTTCCGATGTACTTCCCCATCGGAAACATGGCGACGGGATTCTTTATTATCTTCTCTTTGATTGCTGGGATTGTTGGAATGGCAACATCAGCCACAGGTATCACCAATGTCTCAAAATGGAATGCCTCAAACGTACACACAGCATCTGCTTCCTCTCTTGCAACTTGGGCAGTCACTGTTCTTGCTATGGGGTAATTTTTATACACTTCTTTTTTCCCTCTCTGTTCTCTTTACAGTAAATCAGTTTTCCAATGGTAATTTGATTATGAACTTCGTATTTAATAATTTACTGTTTTCTTTACTCTGTTTTCCAGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAAATGGAAACTTGGTAAGACAGGCATTGTCTGGAACAGTTCCCACTTTTTAACTTTTCTCTTACTTTCATTCTTGAAGAAGCTTGTTGGGTAATGTTTGTTAAATTCCAATTTCAAGTCTTCAAGCTAGAAGCTTTTCAAGTACATAAGTGTCTAGACCCTAAAGAAGGAAGGGTTTTTTAATGACTTGTTTTTCCTTTTTGGTACTTTCTATATCGCTATACGATCTCGTAGTTGCATACGTGGTTCATATACATTATTCTACTTTATCAATCCACGTAATACGAACTAATAAAACTAGAAATAAAACGACAATTCAAAGGCCAAGACTACTTTATAGAACTAGAAATCACATGGTTCTATATATGGTTGTACGACTGAAAGATTGAAATGTGGAATATTTGTATTTGTACACAGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAATTGTTATGCACAGGCGCTATCCAAGTTGGGGTTGAAGAGATGATTGTTAGTAGCAACCGAATTGGCGGAAGGGTTTGAACCAAACATGCATGAATACATGTACAAACCAATAGCTTGGAACTTCAAACACCCTTTTGATTTCTTTTTCTGTAATTTTTTAATTTTCTAATTGTGTTCTTTCATGTATTGATTCCGTGTGGATTTGATGTTGAGGTGATGATATGTCACCTGTATTTGTTTTCCTTTTTCTTTTTAAATCTTATAACATGTGAGCTTGAAAATACAAAATTAAATAAAAAAAAAAGGCTTGGATAATTGTTGTTTATAAGTTCATGGTGATTGTCTAGACGACTGCCCTGAAAAGGGATCTATCTTCAAGTGTTATAC

mRNA sequence

TGTATGTCCCTTTATATCCATCTATCTTATGAGCTCAGGGCAAGGAGGTGACTTTCATTCTCTCTCGTTCTCTTTCTTGGCTTCTCTAAGCTCCAAAAATCCATGGCTACTCAAGTGCGATCTGCAGTTTCCGTCCTTCTAGTTCTTAATCTCGTACTCTACTTCATCATCACTGTCATTGCTTCGTGGGCGGTAAATCACGCGTTGGAGAAGTCTTTCGAATCAGCATCGACGTTGGCACTGCCAGCCCACTTGTTTCCGATGTACTTCCCCATCGGAAACATGGCGACGGGATTCTTTATTATCTTCTCTTTGATTGCTGGGATTGTTGGAATGGCAACATCAGCCACAGGTATCACCAATGTCTCAAAATGGAATGCCTCAAACGTACACACAGCATCTGCTTCCTCTCTTGCAACTTGGGCAGTCACTGTTCTTGCTATGGGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAAATGGAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAATTGTTATGCACAGGCGCTATCCAAGTTGGGGTTGAAGAGATGATTGTTAGTAGCAACCGAATTGGCGGAAGGGTTTGAACCAAACATGCATGAATACATGTACAAACCAATAGCTTGGAACTTCAAACACCCTTTTGATTTCTTTTTCTGTAATTTTTTAATTTTCTAATTGTGTTCTTTCATGTATTGATTCCGTGTGGATTTGATGTTGAGGTGATGATATGTCACCTGTATTTGTTTTCCTTTTTCTTTTTAAATCTTATAACATGTGAGCTTGAAAATACAAAATTAAATAAAAAAAAAAGGCTTGGATAATTGTTGTTTATAAGTTCATGGTGATTGTCTAGACGACTGCCCTGAAAAGGGATCTATCTTCAAGTGTTATAC

Coding sequence (CDS)

ATGGCTACTCAAGTGCGATCTGCAGTTTCCGTCCTTCTAGTTCTTAATCTCGTACTCTACTTCATCATCACTGTCATTGCTTCGTGGGCGGTAAATCACGCGTTGGAGAAGTCTTTCGAATCAGCATCGACGTTGGCACTGCCAGCCCACTTGTTTCCGATGTACTTCCCCATCGGAAACATGGCGACGGGATTCTTTATTATCTTCTCTTTGATTGCTGGGATTGTTGGAATGGCAACATCAGCCACAGGTATCACCAATGTCTCAAAATGGAATGCCTCAAACGTACACACAGCATCTGCTTCCTCTCTTGCAACTTGGGCAGTCACTGTTCTTGCTATGGGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAAATGGAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAATTGTTATGCACAGGCGCTATCCAAGTTGGGGTTGAAGAGATGATTGTTAGTAGCAACCGAATTGGCGGAAGGGTTTGA

Homology

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BLAST of CmoCh06G014460 vs. TrEMBL
Match: A0A0A0L8V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150170 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.6e-71
Identity = 141/169 (83.43%), Postives = 161/169 (95.27%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MATQ +SAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTL LPA LFP+YFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG++GMA+SATGITNV+KW++SN+HTAS SSLAT+AVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLEV+TIITSATQLLCTGA+Q+GVEEM+V+  ++GGRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of CmoCh06G014460 vs. TrEMBL
Match: A0A0B2P0X7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009897 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.9e-54
Identity = 111/169 (65.68%), Postives = 140/169 (82.84%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PA +FP+YFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           M TGFF+IFSL+AG+VG  TS TG+ N+ +WNA N+H A+ SSL TWA+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLE +TII SATQLLCTG I VGV E++  + R+GGRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

[Close]

BLAST of CmoCh06G014460 vs. TrEMBL
Match: K7L3U1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G255100 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.9e-54
Identity = 111/169 (65.68%), Postives = 140/169 (82.84%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PA +FP+YFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           M TGFF+IFSL+AG+VG  TS TG+ N+ +WNA N+H A+ SSL TWA+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLE +TII SATQLLCTG I VGV E++  + R+GGRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

[Close]

BLAST of CmoCh06G014460 vs. TrEMBL
Match: A0A0B2P247_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004452 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-53
Identity = 109/169 (64.50%), Postives = 138/169 (81.66%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PA +FP+YFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           M TGFF+I SL+AG+VG  TS TG+ N+ +WNA N+H A+ SSL TWA+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLE +TII SATQLLCTG I VGV E++  + R+GGRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

[Close]

BLAST of CmoCh06G014460 vs. TrEMBL
Match: I1MRA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G019200 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-53
Identity = 109/169 (64.50%), Postives = 138/169 (81.66%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PA +FP+YFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           M TGFF+I SL+AG+VG  TS TG+ N+ +WNA N+H A+ SSL TWA+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLE +TII SATQLLCTG I VGV E++  + R+GGRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

[Close]

BLAST of CmoCh06G014460 vs. TAIR10
Match: AT5G18970.1 (AT5G18970.1 AWPM-19-like family protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55
Identity = 107/159 (67.30%), Postives = 135/159 (84.91%), Query Frame = 1


Query: 6   RSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGNMATGF 65
           +SA  +LL+LNL LYF+IT+IASWAVNH +E++ ESASTL+LPA +FP+YFP+GNMATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 66  FIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIELGW 125
           F+IF+LIAG+VGMATS TGI NV +W++ N+H+A+ASSL +W++T+LAMG A KEI +GW
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACKEINIGW 126

Query: 126 TNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNR 165
           T  NLRTLEV+TII SATQLLCTGAI  GV E + S  R
Sbjct: 127 TEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGER 165

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BLAST of CmoCh06G014460 vs. TAIR10
Match: AT1G29520.1 (AT1G29520.1 AWPM-19-like family protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.0e-33
Identity = 70/148 (47.30%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 4   QVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I  WA+N A++  FE    L LPAH  P+YFP+GN AT
Sbjct: 5   QIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAAT 64

Query: 64  GFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIEL 123
           GFF+IF+L+AG+VG A++ +G++++  W   ++  A+ ++   W +TVLAMGFAWKEIEL
Sbjct: 65  GFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIEL 124

Query: 124 GWTNGNLRTLEVMTIITSATQLLCTGAI 152
              N  LRT+E   II S TQL+   A+
Sbjct: 125 QGRNAKLRTMEAFLIILSVTQLIYIAAV 152

[Close]

BLAST of CmoCh06G014460 vs. TAIR10
Match: AT5G46530.1 (AT5G46530.1 AWPM-19-like family protein)

HSP 1 Score: 127.5 bits (319), Expect = 7.9e-30
Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1


Query: 4   QVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I +W++N A+   F   +  +LPAH  P++FP+GN AT
Sbjct: 5   QMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAAT 64

Query: 64  GFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIEL 123
           GFFI+F+LIAG+ G A+  +GI+++  W  +++  A +++   W++T+LAMGF  KEIEL
Sbjct: 65  GFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIEL 124

Query: 124 GWTNGNLRTLEVMTIITSATQLLCTGAI 152
           G  N  LRT+E   II SATQLL   AI
Sbjct: 125 GMRNARLRTMEAFLIILSATQLLYIAAI 152

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BLAST of CmoCh06G014460 vs. TAIR10
Match: AT1G04560.1 (AT1G04560.1 AWPM-19-like family protein)

HSP 1 Score: 81.3 bits (199), Expect = 6.5e-16
Identity = 58/156 (37.18%), Postives = 81/156 (51.92%), Query Frame = 1


Query: 1   MATQV-RSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIG 60
           MAT V R+  + LL LNLV+Y I+   ASW +N  +       S               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFG-------------G 60

Query: 61  NMATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWK 120
           N AT FF+ FS++A +VG+A+   G  ++  W   ++  A ASS+  WA+T LAMG A K
Sbjct: 61  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 120

Query: 121 EIEL-GWTNGNLRTLEVMTIITSATQLLCTGAIQVG 155
           +I + GW    L+ +E   II + TQLL    I  G
Sbjct: 121 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAG 143

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BLAST of CmoCh06G014460 vs. NCBI nr
Match: gi|659076548|ref|XP_008438739.1| (PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 6.0e-72
Identity = 145/169 (85.80%), Postives = 161/169 (95.27%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MATQV+SAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTL LPA LFP+YFP GN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG+VGMA+SATGITNV+KWN+SN+HTAS SSLAT+AVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLEV+TIITSATQLLCTGA+Q+GVEEMIV+  R+ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 169

[Close]

BLAST of CmoCh06G014460 vs. NCBI nr
Match: gi|449432761|ref|XP_004134167.1| (PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 6.6e-71
Identity = 141/169 (83.43%), Postives = 161/169 (95.27%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MATQ +SAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTL LPA LFP+YFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           MATGFF+IFSLIAG++GMA+SATGITNV+KW++SN+HTAS SSLAT+AVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLEV+TIITSATQLLCTGA+Q+GVEEM+V+  ++GGRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of CmoCh06G014460 vs. NCBI nr
Match: gi|955332466|ref|XP_014633734.1| (PREDICTED: uncharacterized protein LOC100779785 [Glycine max])

HSP 1 Score: 219.2 bits (557), Expect = 5.6e-54
Identity = 111/169 (65.68%), Postives = 140/169 (82.84%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PA +FP+YFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           M TGFF+IFSL+AG+VG  TS TG+ N+ +WNA N+H A+ SSL TWA+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLE +TII SATQLLCTG I VGV E++  + R+GGRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

[Close]

BLAST of CmoCh06G014460 vs. NCBI nr
Match: gi|356563662|ref|XP_003550080.1| (PREDICTED: uncharacterized protein LOC100808359 [Glycine max])

HSP 1 Score: 215.3 bits (547), Expect = 8.1e-53
Identity = 109/169 (64.50%), Postives = 138/169 (81.66%), Query Frame = 1


Query: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PA +FP+YFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120
           M TGFF+I SL+AG+VG  TS TG+ N+ +WNA N+H A+ SSL TWA+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           IELGWT+ NLRTLE +TII SATQLLCTG I VGV E++  + R+GGRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVV--AQRMGGRV 167

[Close]

BLAST of CmoCh06G014460 vs. NCBI nr
Match: gi|567175506|ref|XP_006400451.1| (hypothetical protein EUTSA_v10014847mg [Eutrema salsugineum])

HSP 1 Score: 212.6 bits (540), Expect = 5.3e-52
Identity = 109/164 (66.46%), Postives = 136/164 (82.93%), Query Frame = 1


Query: 6   RSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGNMATGF 65
           +SA  +LL+LNL LYF++TVIASWAVNH +E++ ESAS L+LPA +FP++FP+GNMATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVVTVIASWAVNHGIERARESASVLSLPAKIFPIFFPVGNMATGF 66

Query: 66  FIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKEIELGW 125
           F+IFSLIAG+VGMATS TG+ NV +W++ N+H+A+ASSL +WA+T+LAMG A KEI +GW
Sbjct: 67  FVIFSLIAGVVGMATSLTGVMNVLQWDSPNLHSAAASSLISWALTLLAMGLACKEINIGW 126

Query: 126 TNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 170
           T  NLRTLEVMTII SATQLLCTGAI VGV E +       GRV
Sbjct: 127 TEANLRTLEVMTIIVSATQLLCTGAIHVGVGETVAGERPHVGRV 170

The following BLAST results are available for this feature:

BLAST of CmoCh06G014460 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G014460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8V6_CUCSA	4.6e-71	83.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150170 PE=4 SV=1	[more]
A0A0B2P0X7_GLYSO	3.9e-54	65.68	Uncharacterized protein OS=Glycine soja GN=glysoja_009897 PE=4 SV=1	[more]
K7L3U1_SOYBN	3.9e-54	65.68	Uncharacterized protein OS=Glycine max GN=GLYMA_07G255100 PE=4 SV=1	[more]
A0A0B2P247_GLYSO	5.7e-53	64.50	Uncharacterized protein OS=Glycine soja GN=glysoja_004452 PE=4 SV=1	[more]
I1MRA6_SOYBN	5.7e-53	64.50	Uncharacterized protein OS=Glycine max GN=GLYMA_17G019200 PE=4 SV=1	[more]

BLAST of CmoCh06G014460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18970.1	1.9e-55	67.30	AWPM-19-like family protein	[more]
AT1G29520.1	2.0e-33	47.30	AWPM-19-like family protein	[more]
AT5G46530.1	7.9e-30	45.95	AWPM-19-like family protein	[more]
AT1G04560.1	6.5e-16	37.18	AWPM-19-like family protein	[more]

BLAST of CmoCh06G014460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076548\|ref\|XP_008438739.1\|	6.0e-72	85.80	PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo]	[more]
gi\|449432761\|ref\|XP_004134167.1\|	6.6e-71	83.43	PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus]	[more]
gi\|955332466\|ref\|XP_014633734.1\|	5.6e-54	65.68	PREDICTED: uncharacterized protein LOC100779785 [Glycine max]	[more]
gi\|356563662\|ref\|XP_003550080.1\|	8.1e-53	64.50	PREDICTED: uncharacterized protein LOC100808359 [Glycine max]	[more]
gi\|567175506\|ref\|XP_006400451.1\|	5.3e-52	66.46	hypothetical protein EUTSA_v10014847mg [Eutrema salsugineum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G014460.1	CmoCh06G014460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 14..154 score: 1.6
None	No IPR available	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..164 score: 2.9
None	No IPR available	PANTHER	PTHR33294:SF3	AWPM-19-LIKE PROTEIN	coord: 1..164 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G014460	Cucsa.253870	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G014460	Cla021676	Watermelon (97103) v1	cmowmB793
CmoCh06G014460	Csa3G150170	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G014460	MELO3C006578	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G014460	ClCG05G005530	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G014460	Cp4.1LG08g04400	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G014460	MELO3C006578.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G014460	CsaV3_3G013850	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G014460	Cla97C05G086900	Watermelon (97103) v2	cmowmbB833
CmoCh06G014460	Carg17389	Silver-seed gourd	carcmoB0825

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G014460	Cucurbita pepo (Zucchini)	cmocpeB765
CmoCh06G014460	Cucurbita pepo (Zucchini)	cmocpeB777
CmoCh06G014460	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G014460	Bottle gourd (USVL1VR-Ls)	cmolsiB733
CmoCh06G014460	Bottle gourd (USVL1VR-Ls)	cmolsiB742
CmoCh06G014460	Bottle gourd (USVL1VR-Ls)	cmolsiB752
CmoCh06G014460	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G014460	Cucumber (Gy14) v2	cgybcmoB839
CmoCh06G014460	Cucumber (Gy14) v2	cgybcmoB840
CmoCh06G014460	Melon (DHL92) v3.6.1	cmomedB840
CmoCh06G014460	Silver-seed gourd	carcmoB0102
CmoCh06G014460	Silver-seed gourd	carcmoB0313
CmoCh06G014460	Silver-seed gourd	carcmoB0448
CmoCh06G014460	Cucumber (Chinese Long) v3	cmocucB0986
CmoCh06G014460	Cucumber (Chinese Long) v3	cmocucB0984
CmoCh06G014460	Watermelon (97103) v2	cmowmbB837
CmoCh06G014460	Watermelon (97103) v2	cmowmbB847
CmoCh06G014460	Wax gourd	cmowgoB0999
CmoCh06G014460	Wax gourd	cmowgoB1005
CmoCh06G014460	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G014460	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh06G014460	Cucurbita moschata (Rifu)	cmocmoB309
CmoCh06G014460	Cucurbita moschata (Rifu)	cmocmoB484
CmoCh06G014460	Cucurbita moschata (Rifu)	cmocmoB485
CmoCh06G014460	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G014460	Cucurbita maxima (Rimu)	cmacmoB362
CmoCh06G014460	Cucurbita maxima (Rimu)	cmacmoB364
CmoCh06G014460	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G014460	Cucurbita maxima (Rimu)	cmacmoB910
CmoCh06G014460	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G014460	Melon (DHL92) v3.5.1	cmomeB738
CmoCh06G014460	Watermelon (Charleston Gray)	cmowcgB721
CmoCh06G014460	Watermelon (Charleston Gray)	cmowcgB746
CmoCh06G014460	Watermelon (97103) v1	cmowmB772
CmoCh06G014460	Watermelon (97103) v1	cmowmB802