Cla021676 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021676
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Plasma membrane associated protein (AHRD V1 **-- B6UGF3_MAIZE); contains Interpro domain(s) IPR008390 AWPM-19-like
Location	Chr5 : 5189759 .. 5191328 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCAGGTGCAATCTGCAGTTTCTGTCCTTTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATTGCTTCGTGGGCAGTCAACCACGCGATGGAGAAATCTTTCGAATCAGGTAACATTCAACTCTAATCTCAAACTTTATTAACCTATTTAGAGCGTTGAGTGTTTTATAAGTTTTTCAGATCTCTAAGTGTTCTACTACTTTGTATGAATTTGTAGCATCAACATTGACGTTGCCAGCTCGGTTGTTTCCGATCTACTTCCCGATTGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGGTTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGAATGCTTCAAACATTCACACAGCATCTGTTTCCTCTCTTGCAACATTTGCAGTCACTATACTTGCTATGGGGTAATTCTTATACACATTTATCTTTTTTCTTTGCCTTTTGTTGTTTTTGTTAAAAAATTTCAGTTTATTTTCATTTTCCAATAGTAATTTGATTATGAACTGATCATTTTCCAATGTTTTATTTATTCTATTTTTCAGGTTTGCGTGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGGTAAGGCATATTATTTGGCACATTTCCCATTTTTAACTTTTCTTATTTTCATTATTGGAAAAGTATGAGGGGTGATGTTAGTTATGTTCCAATTCCAAGTCTTCTGGTTAGAATATTTTCAAGGACATTACTTTTTTTAGACAGTAAACAAAGAAGGGCTTTCAGTGACTTTACTTTTCTATTAAAACATGATTCTAAAACTTTTATTAGTAAAAATACTTAAATGCATTTCGGAATACACCATATTTGTACATCTCATCAAATTATCCAATCATAGTTTGTCACATGACAAATTATCCAATCATAGTTAATTTTAAAACACTCTTCTTTCGTTCAAATCTGATCTCTAATCACCATCGTTATATACGTAAGAAGAAATTACATTTGTTCATGGAAAAGAAAAAAAGAAAAGGGTGTCACTTGCCCTTTTTTAAAATAAGTTGGAGTGGCAATGCCTTCAAATTTAATGATTCCTTAACTTAATCATCACTGACAAAAATATTGTAAAGTCATGAATTTTACTTATAAAAAGAAAGTAATAGAGTAATTGTCCAATAGTGAATAAAGATTACTACTCTGTATCATTAAAAACTAACCCCATCAATACATAGTTTTTATTTTAAAGAAACCCATTAATATATAACTACACAAATAGTTGATATCCTATTTCATTATATAATTCCATGTCTTTCTTGAATCCTAATAATATGGCCAGAAACAAAGAAAAAAACTATGAATATTTTTCTTGTCCTTTGATCTTGTTCTAATTTCTTTTTTGAGATTGAATAATTGAAAAGTGAAAATTTTGTAAACAGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGCACAGGTGCTGTTCAAATTGGAGTTGAAGAGATGATTGTTGCTCACAACCGACTTGCTGGAAGGGTTTGA

mRNA sequence

ATGGCTACTCAGGTGCAATCTGCAGTTTCTGTCCTTTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATTGCTTCGTGGGCAGTCAACCACGCGATGGAGAAATCTTTCGAATCAGCATCAACATTGACGTTGCCAGCTCGGTTGTTTCCGATCTACTTCCCGATTGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGGTTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGAATGCTTCAAACATTCACACAGCATCTGTTTCCTCTCTTGCAACATTTGCAGTCACTATACTTGCTATGGGGTTTGCGTGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGCACAGGTGCTGTTCAAATTGGAGTTGAAGAGATGATTGTTGCTCACAACCGACTTGCTGGAAGGGTTTGA

Coding sequence (CDS)

ATGGCTACTCAGGTGCAATCTGCAGTTTCTGTCCTTTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATTGCTTCGTGGGCAGTCAACCACGCGATGGAGAAATCTTTCGAATCAGCATCAACATTGACGTTGCCAGCTCGGTTGTTTCCGATCTACTTCCCGATTGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGGTTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGAATGCTTCAAACATTCACACAGCATCTGTTTCCTCTCTTGCAACATTTGCAGTCACTATACTTGCTATGGGGTTTGCGTGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGCACAGGTGCTGTTCAAATTGGAGTTGAAGAGATGATTGTTGCTCACAACCGACTTGCTGGAAGGGTTTGA

Protein sequence

MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKEIELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV

Homology

[Close]

BLAST of Cla021676 vs. TrEMBL
Match: A0A0A0L8V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150170 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.2e-80
Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQ QSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           MATGFFVIFSLIAGV+GMASSATGITN+TKW++SNIHTASVSSLATFAVTILAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQIGVEEM+VA  ++ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of Cla021676 vs. TrEMBL
Match: K7L3U1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G255100 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVIFSL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of Cla021676 vs. TrEMBL
Match: A0A0B2P0X7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009897 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVIFSL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of Cla021676 vs. TrEMBL
Match: I1MRA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G019200 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 111/169 (65.68%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of Cla021676 vs. TrEMBL
Match: A0A0B2P247_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004452 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 111/169 (65.68%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of Cla021676 vs. NCBI nr
Match: gi|659076548|ref|XP_008438739.1| (PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 8.3e-82
Identity = 160/169 (94.67%), Postives = 165/169 (97.63%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           MATGFFVIFSLIAGVVGMASSATGITN+TKWN+SNIHTASVSSLATFAVTILAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQIGVEEMIVA  R+ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 169

[Close]

BLAST of Cla021676 vs. NCBI nr
Match: gi|449432761|ref|XP_004134167.1| (PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 6.0e-80
Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQ QSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           MATGFFVIFSLIAGV+GMASSATGITN+TKW++SNIHTASVSSLATFAVTILAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQIGVEEM+VA  ++ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of Cla021676 vs. NCBI nr
Match: gi|955332466|ref|XP_014633734.1| (PREDICTED: uncharacterized protein LOC100779785 [Glycine max])

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-58
Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVIFSL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of Cla021676 vs. NCBI nr
Match: gi|356563662|ref|XP_003550080.1| (PREDICTED: uncharacterized protein LOC100808359 [Glycine max])

HSP 1 Score: 229.6 bits (584), Expect = 4.2e-57
Identity = 111/169 (65.68%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of Cla021676 vs. NCBI nr
Match: gi|920689608|gb|KOM33591.1| (hypothetical protein LR48_Vigan01g314700 [Vigna angularis])

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 106/159 (66.67%), Postives = 134/159 (84.28%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SLIAGVVG  +S TG+ NI +W+A N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLIAGVVGFTTSLTGLNNIFQWDAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMI 160
           IELGWTDSNLRTLE +TII SATQLLCTG + +G+ E++
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGISEVV 159

The following BLAST results are available for this feature:

BLAST of Cla021676 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8V6_CUCSA	4.2e-80	91.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150170 PE=4 SV=1	[more]
K7L3U1_SOYBN	1.5e-58	66.86	Uncharacterized protein OS=Glycine max GN=GLYMA_07G255100 PE=4 SV=1	[more]
A0A0B2P0X7_GLYSO	1.5e-58	66.86	Uncharacterized protein OS=Glycine soja GN=glysoja_009897 PE=4 SV=1	[more]
I1MRA6_SOYBN	2.9e-57	65.68	Uncharacterized protein OS=Glycine max GN=GLYMA_17G019200 PE=4 SV=1	[more]
A0A0B2P247_GLYSO	2.9e-57	65.68	Uncharacterized protein OS=Glycine soja GN=glysoja_004452 PE=4 SV=1	[more]

BLAST of Cla021676 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076548\|ref\|XP_008438739.1\|	8.3e-82	94.67	PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo]	[more]
gi\|449432761\|ref\|XP_004134167.1\|	6.0e-80	91.72	PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus]	[more]
gi\|955332466\|ref\|XP_014633734.1\|	2.2e-58	66.86	PREDICTED: uncharacterized protein LOC100779785 [Glycine max]	[more]
gi\|356563662\|ref\|XP_003550080.1\|	4.2e-57	65.68	PREDICTED: uncharacterized protein LOC100808359 [Glycine max]	[more]
gi\|920689608\|gb\|KOM33591.1\|	1.3e-55	66.67	hypothetical protein LR48_Vigan01g314700 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU55974	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021676	Cla021676.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU55974	WMU55974	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 14..153 score: 2.3
None	No IPR available	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..160 score: 8.9
None	No IPR available	PANTHER	PTHR33294:SF3	AWPM-19-LIKE PROTEIN	coord: 1..160 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021676	Cla97C05G086900	Watermelon (97103) v2	wmwmbB206
Cla021676	Csa3G150170	Cucumber (Chinese Long) v2	cuwmB233
Cla021676	MELO3C006578	Melon (DHL92) v3.5.1	mewmB461
Cla021676	ClCG05G005530	Watermelon (Charleston Gray)	wcgwmB286
Cla021676	CSPI03G13630	Wild cucumber (PI 183967)	cpiwmB231
Cla021676	Cucsa.253870	Cucumber (Gy14) v1	cgywmB479
Cla021676	CmoCh06G014460	Cucurbita moschata (Rifu)	cmowmB793
Cla021676	Lsi05G014680	Bottle gourd (USVL1VR-Ls)	lsiwmB362
Cla021676	Cp4.1LG08g04400	Cucurbita pepo (Zucchini)	cpewmB845
Cla021676	MELO3C006578.2	Melon (DHL92) v3.6.1	medwmB447
Cla021676	Carg17389	Silver-seed gourd	carwmB0603
Cla021676	CsaV3_3G013850	Cucumber (Chinese Long) v3	cucwmB239
Cla021676	Bhi01G000644	Wax gourd	wgowmB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021676	Cucumber (Gy14) v1	cgywmB664
Cla021676	Cucurbita maxima (Rimu)	cmawmB242
Cla021676	Cucurbita maxima (Rimu)	cmawmB344
Cla021676	Cucurbita maxima (Rimu)	cmawmB798
Cla021676	Cucurbita maxima (Rimu)	cmawmB869
Cla021676	Cucurbita moschata (Rifu)	cmowmB231
Cla021676	Cucurbita moschata (Rifu)	cmowmB341
Cla021676	Cucurbita moschata (Rifu)	cmowmB856
Cla021676	Melon (DHL92) v3.5.1	mewmB096
Cla021676	Watermelon (Charleston Gray)	wcgwmB332
Cla021676	Cucumber (Chinese Long) v2	cuwmB494
Cla021676	Cucurbita pepo (Zucchini)	cpewmB152
Cla021676	Cucurbita pepo (Zucchini)	cpewmB331
Cla021676	Cucurbita pepo (Zucchini)	cpewmB613
Cla021676	Bottle gourd (USVL1VR-Ls)	lsiwmB017
Cla021676	Cucumber (Gy14) v2	cgybwmB217
Cla021676	Cucumber (Gy14) v2	cgybwmB461
Cla021676	Melon (DHL92) v3.6.1	medwmB094
Cla021676	Melon (DHL92) v3.6.1	medwmB228
Cla021676	Silver-seed gourd	carwmB0070
Cla021676	Silver-seed gourd	carwmB0211
Cla021676	Silver-seed gourd	carwmB0316
Cla021676	Cucumber (Chinese Long) v3	cucwmB519
Cla021676	Watermelon (97103) v2	wmwmbB217
Cla021676	Wax gourd	wgowmB068
Cla021676	Watermelon (97103) v1	wmwmB138