ClCG05G005530 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G005530
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	AWPM-19-like membrane family protein
Location	CG_Chr05 : 5409626 .. 5411426 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTAATTTCATCCTCTCCCATTCCCTTTCCTTCCTTCTCTAAGCTTCAAAAATCCATGGCTACTCAGGTGCAATCTGCAGTTTCTGTCCTTTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATTGCTTCGTGGGCAGTCAACCACGCGATGGAGAAATCTTTCGAATCAGGTAACATTCAACTCTAATCTCAAACTTTATTAACCTATTTAGAGCGTTGAGTGTTTTATAAGTTTTTCAGATCTCTAAGTGTTCTACTACTTTGTATGAATTTGTAGCATCAACATTGACGTTGCCAGCTCGGTTGTTTCCGATCTACTTCCCGATTGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGGTTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGAATGCTTCAAACATTCACACAGCATCTGTTTCCTCTCTTGCAACATTTGCAGTCACTATACTTGCTATGGGGTAATTCTTATACACATTTATCTTTTTTCTTTGCCTTTTGTTGTTTTTGTTAAAAAATTTCAGTTTATTTTCATTTTCCAATAGTAATTTGATTATGAACTGATCATTTTCCAATGTTTTATTTATTCTATTTTTCAGGTTTGCGTGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGGTAAGGCATATTATTTGGCACATTTCCCATTTTTAACTTTTCTTATTTTCATTATTGGAAAAGTATGAGGGGTGATGTTAGTTATGTTCCAATTCCAAGTCTTCTGGTTAGAATATTTTCAAGGACATTACTTTTTTTAGACAGTAAACAAAGAAGGGCTTTCAGTGACTTTACTTTTCTATTAAAACATGATTCTAAAACTTTTATTAGTAAAAATACTTAAATGCATTTCGGAATACACCATATTTGTACATCTCATCAAATTATCCAATCATAGTTTGTCACATGACAAATTATCCAATCATAGTTAATTTTAAAACACTCTTCTTTCGTTCAAATCTGATCTCTAATCACCATCGTTATATACGTAAGAAGAAATTACATTTGTTCATGGAAAAGAAAAAAAGAAAAGGGTGTCACTTGCCCTTTTTTAAAATAAGTTGGAGTGGCAATGCCTTCAAATTTAATGATTCCTTAACTTAATCATCACTGACAAAAATATTGTAAAGTCATGAATTTTACTTATAAAAAGAAAGTAATAGAGTAATTGTCCAATAGTGAATAAAGATTACTACTCTGTATCATTAAAAACTAACCCCATCAATACATAGTTTTTATTTTAAAGAAACCCATTAATATATAACTACACAAATAGTTGATATCCTATTTCATTATATAATTCCATGTCTTTCTTGAATCCTAATAATATGGCCAGAAACAAAGAAAAAAACTATGAATATTTTTCTTGTCCTTTGATCTTGTTCTAATTTCTTTTTTGAGATTGAATAATTGAAAAGTGAAAATTTTGTAAACAGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGCACAGGTGCTGTTCAAATTGGAGTTGAAGAGATGATTGTTGCTCACAACCGACTTGCTGGAAGGGTTTGAATCAAACTTAAATCTTTCATTCTTTCTTTCTTTCTTTTTGATTCTTTTTTCAAGATTTCGTGTGTTAATTTCGTGTGGATTGATGTTTAGATGATATGGCAAATGTCGTCTATCACACTTGAATTTGTTTTCCTTCTTCCTGTTTAATTTTTTACATGTGAGCTTGAAAATAGA

mRNA sequence

CAGGTAATTTCATCCTCTCCCATTCCCTTTCCTTCCTTCTCTAAGCTTCAAAAATCCATGGCTACTCAGGTGCAATCTGCAGTTTCTGTCCTTTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATTGCTTCGTGGGCAGTCAACCACGCGATGGAGAAATCTTTCGAATCAGCATCAACATTGACGTTGCCAGCTCGGTTGTTTCCGATCTACTTCCCGATTGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGGTTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGAATGCTTCAAACATTCACACAGCATCTGTTTCCTCTCTTGCAACATTTGCAGTCACTATACTTGCTATGGGGTTTGCGTGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGCACAGGTGCTGTTCAAATTGGAGTTGAAGAGATGATTGTTGCTCACAACCGACTTGCTGGAAGGGTTTGAATCAAACTTAAATCTTTCATTCTTTCTTTCTTTCTTTTTGATTCTTTTTTCAAGATTTCGTGTGTTAATTTCGTGTGGATTGATGTTTAGATGATATGGCAAATGTCGTCTATCACACTTGAATTTGTTTTCCTTCTTCCTGTTTAATTTTTTACATGTGAGCTTGAAAATAGA

Coding sequence (CDS)

ATGGCTACTCAGGTGCAATCTGCAGTTTCTGTCCTTTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATTGCTTCGTGGGCAGTCAACCACGCGATGGAGAAATCTTTCGAATCAGCATCAACATTGACGTTGCCAGCTCGGTTGTTTCCGATCTACTTCCCGATTGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGGTTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGAATGCTTCAAACATTCACACAGCATCTGTTTCCTCTCTTGCAACATTTGCAGTCACTATACTTGCTATGGGGTTTGCGTGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGCACAGGTGCTGTTCAAATTGGAGTTGAAGAGATGATTGTTGCTCACAACCGACTTGCTGGAAGGGTTTGA

Protein sequence

MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKEIELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV

Homology

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BLAST of ClCG05G005530 vs. TrEMBL
Match: A0A0A0L8V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150170 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.2e-80
Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQ QSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           MATGFFVIFSLIAGV+GMASSATGITN+TKW++SNIHTASVSSLATFAVTILAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQIGVEEM+VA  ++ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of ClCG05G005530 vs. TrEMBL
Match: K7L3U1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G255100 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVIFSL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of ClCG05G005530 vs. TrEMBL
Match: A0A0B2P0X7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_009897 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVIFSL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of ClCG05G005530 vs. TrEMBL
Match: I1MRA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G019200 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 111/169 (65.68%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of ClCG05G005530 vs. TrEMBL
Match: A0A0B2P247_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004452 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.9e-57
Identity = 111/169 (65.68%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of ClCG05G005530 vs. TAIR10
Match: AT5G18970.1 (AT5G18970.1 AWPM-19-like family protein)

HSP 1 Score: 220.7 bits (561), Expect = 6.8e-58
Identity = 104/159 (65.41%), Postives = 135/159 (84.91%), Query Frame = 1


Query: 6   QSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMATGF 65
           +SA  +LL+LNL LYF+IT+IASWAVNH +E++ ESASTL+LPA++FPIYFP+GNMATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 66  FVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKEIELGW 125
           FVIF+LIAGVVGMA+S TGI N+ +W++ N+H+A+ SSL ++++T+LAMG A KEI +GW
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACKEINIGW 126

Query: 126 TDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNR 165
           T++NLRTLEV+TII SATQLLCTGA+  GV E + +  R
Sbjct: 127 TEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGER 165

[Close]

BLAST of ClCG05G005530 vs. TAIR10
Match: AT1G29520.1 (AT1G29520.1 AWPM-19-like family protein)

HSP 1 Score: 147.9 bits (372), Expect = 5.6e-36
Identity = 72/148 (48.65%), Postives = 97/148 (65.54%), Query Frame = 1


Query: 4   QVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I  WA+N A++  FE    L LPA   PIYFP+GN AT
Sbjct: 5   QIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAAT 64

Query: 64  GFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKEIEL 123
           GFFVIF+L+AGVVG AS+ +G+++I  W   ++  A+ ++   + +T+LAMGFAWKEIEL
Sbjct: 65  GFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIEL 124

Query: 124 GWTDSNLRTLEVMTIITSATQLLCTGAV 152
              ++ LRT+E   II S TQL+   AV
Sbjct: 125 QGRNAKLRTMEAFLIILSVTQLIYIAAV 152

[Close]

BLAST of ClCG05G005530 vs. TAIR10
Match: AT5G46530.1 (AT5G46530.1 AWPM-19-like family protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 66/148 (44.59%), Postives = 96/148 (64.86%), Query Frame = 1


Query: 4   QVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I +W++N A+   F   +  +LPA   PI+FP+GN AT
Sbjct: 5   QMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAAT 64

Query: 64  GFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKEIEL 123
           GFF++F+LIAGV G AS  +GI+++  W  +++  A  ++   +++T+LAMGF  KEIEL
Sbjct: 65  GFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIEL 124

Query: 124 GWTDSNLRTLEVMTIITSATQLLCTGAV 152
           G  ++ LRT+E   II SATQLL   A+
Sbjct: 125 GMRNARLRTMEAFLIILSATQLLYIAAI 152

[Close]

BLAST of ClCG05G005530 vs. TAIR10
Match: AT1G04560.1 (AT1G04560.1 AWPM-19-like family protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 57/156 (36.54%), Postives = 78/156 (50.00%), Query Frame = 1


Query: 1   MATQV-QSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIG 60
           MAT V ++  + LL LNLV+Y I+   ASW +N  +       S               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFG-------------G 60

Query: 61  NMATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWK 120
           N AT FF+ FS++A VVG+AS   G  +I  W   ++  A  SS+  +A+T LAMG A K
Sbjct: 61  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 120

Query: 121 EIEL-GWTDSNLRTLEVMTIITSATQLLCTGAVQIG 155
           +I + GW    L+ +E   II + TQLL    +  G
Sbjct: 121 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAG 143

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BLAST of ClCG05G005530 vs. NCBI nr
Match: gi|659076548|ref|XP_008438739.1| (PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 8.3e-82
Identity = 160/169 (94.67%), Postives = 165/169 (97.63%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           MATGFFVIFSLIAGVVGMASSATGITN+TKWN+SNIHTASVSSLATFAVTILAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQIGVEEMIVA  R+ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 169

[Close]

BLAST of ClCG05G005530 vs. NCBI nr
Match: gi|449432761|ref|XP_004134167.1| (PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 6.0e-80
Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQ QSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           MATGFFVIFSLIAGV+GMASSATGITN+TKW++SNIHTASVSSLATFAVTILAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQIGVEEM+VA  ++ GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of ClCG05G005530 vs. NCBI nr
Match: gi|955332466|ref|XP_014633734.1| (PREDICTED: uncharacterized protein LOC100779785 [Glycine max])

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-58
Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LLVLNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLVLNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVIFSL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVIFSLVAGVVGFTTSLTGLQNILQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of ClCG05G005530 vs. NCBI nr
Match: gi|356563662|ref|XP_003550080.1| (PREDICTED: uncharacterized protein LOC100808359 [Glycine max])

HSP 1 Score: 229.6 bits (584), Expect = 4.2e-57
Identity = 111/169 (65.68%), Postives = 139/169 (82.25%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SL+AGVVG  +S TG+ NI +WNA N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLVAGVVGFTTSLTGLQNIFQWNAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVAHNRLAGRV 170
           IELGWTDSNLRTLE +TII SATQLLCTG + +GV E++    R+ GRV
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGVSEVVA--QRMGGRV 167

[Close]

BLAST of ClCG05G005530 vs. NCBI nr
Match: gi|920689608|gb|KOM33591.1| (hypothetical protein LR48_Vigan01g314700 [Vigna angularis])

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 106/159 (66.67%), Postives = 134/159 (84.28%), Query Frame = 1


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA+  +S  S+LL LNLVLYFI+ VIASWAVNH +++S E+AS L++PAR+FPIYFP+GN
Sbjct: 1   MASGSKSVASILLALNLVLYFIVLVIASWAVNHGIQRSGETASVLSIPARIFPIYFPMGN 60

Query: 61  MATGFFVIFSLIAGVVGMASSATGITNITKWNASNIHTASVSSLATFAVTILAMGFAWKE 120
           M TGFFVI SLIAGVVG  +S TG+ NI +W+A N+H A++SSL T+A+T+LAMGFA KE
Sbjct: 61  MTTGFFVILSLIAGVVGFTTSLTGLNNIFQWDAPNLHAAAMSSLTTWALTLLAMGFACKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQIGVEEMI 160
           IELGWTDSNLRTLE +TII SATQLLCTG + +G+ E++
Sbjct: 121 IELGWTDSNLRTLETITIIVSATQLLCTGVIHVGISEVV 159

The following BLAST results are available for this feature:

BLAST of ClCG05G005530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8V6_CUCSA	4.2e-80	91.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150170 PE=4 SV=1	[more]
K7L3U1_SOYBN	1.5e-58	66.86	Uncharacterized protein OS=Glycine max GN=GLYMA_07G255100 PE=4 SV=1	[more]
A0A0B2P0X7_GLYSO	1.5e-58	66.86	Uncharacterized protein OS=Glycine soja GN=glysoja_009897 PE=4 SV=1	[more]
I1MRA6_SOYBN	2.9e-57	65.68	Uncharacterized protein OS=Glycine max GN=GLYMA_17G019200 PE=4 SV=1	[more]
A0A0B2P247_GLYSO	2.9e-57	65.68	Uncharacterized protein OS=Glycine soja GN=glysoja_004452 PE=4 SV=1	[more]

BLAST of ClCG05G005530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18970.1	6.8e-58	65.41	AWPM-19-like family protein	[more]
AT1G29520.1	5.6e-36	48.65	AWPM-19-like family protein	[more]
AT5G46530.1	1.1e-31	44.59	AWPM-19-like family protein	[more]
AT1G04560.1	1.2e-17	36.54	AWPM-19-like family protein	[more]

BLAST of ClCG05G005530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076548\|ref\|XP_008438739.1\|	8.3e-82	94.67	PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo]	[more]
gi\|449432761\|ref\|XP_004134167.1\|	6.0e-80	91.72	PREDICTED: uncharacterized protein LOC101213723 [Cucumis sativus]	[more]
gi\|955332466\|ref\|XP_014633734.1\|	2.2e-58	66.86	PREDICTED: uncharacterized protein LOC100779785 [Glycine max]	[more]
gi\|356563662\|ref\|XP_003550080.1\|	4.2e-57	65.68	PREDICTED: uncharacterized protein LOC100808359 [Glycine max]	[more]
gi\|920689608\|gb\|KOM33591.1\|	1.3e-55	66.67	hypothetical protein LR48_Vigan01g314700 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G005530.1	ClCG05G005530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 14..153 score: 2.3
None	No IPR available	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..160 score: 8.9
None	No IPR available	PANTHER	PTHR33294:SF3	AWPM-19-LIKE PROTEIN	coord: 1..160 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G005530	Csa3G150170	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G005530	MELO3C006578	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G005530	Cla021676	Watermelon (97103) v1	wcgwmB286
ClCG05G005530	Cla97C05G086900	Watermelon (97103) v2	wcgwmbB229
ClCG05G005530	Bhi01G000644	Wax gourd	wcgwgoB426
ClCG05G005530	CSPI03G13630	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G005530	Cucsa.253870	Cucumber (Gy14) v1	cgywcgB451
ClCG05G005530	CmoCh06G014460	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G005530	Lsi05G014680	Bottle gourd (USVL1VR-Ls)	lsiwcgB333
ClCG05G005530	Cp4.1LG08g04400	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G005530	MELO3C006578.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G005530	Carg17389	Silver-seed gourd	carwcgB0588
ClCG05G005530	CsaV3_3G013850	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G005530	Cucurbita pepo (Zucchini)	cpewcgB139
ClCG05G005530	Cucurbita pepo (Zucchini)	cpewcgB293
ClCG05G005530	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G005530	Bottle gourd (USVL1VR-Ls)	lsiwcgB017
ClCG05G005530	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G005530	Cucumber (Gy14) v2	cgybwcgB433
ClCG05G005530	Melon (DHL92) v3.6.1	medwcgB115
ClCG05G005530	Silver-seed gourd	carwcgB0072
ClCG05G005530	Silver-seed gourd	carwcgB0317
ClCG05G005530	Cucumber (Chinese Long) v3	cucwcgB492
ClCG05G005530	Watermelon (97103) v2	wcgwmbB238
ClCG05G005530	Wax gourd	wcgwgoB415
ClCG05G005530	Watermelon (Charleston Gray)	wcgwcgB160
ClCG05G005530	Cucumber (Gy14) v1	cgywcgB618
ClCG05G005530	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G005530	Cucurbita maxima (Rimu)	cmawcgB320
ClCG05G005530	Cucurbita maxima (Rimu)	cmawcgB737
ClCG05G005530	Cucurbita maxima (Rimu)	cmawcgB796
ClCG05G005530	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G005530	Cucurbita moschata (Rifu)	cmowcgB316
ClCG05G005530	Cucurbita moschata (Rifu)	cmowcgB792
ClCG05G005530	Wild cucumber (PI 183967)	cpiwcgB496
ClCG05G005530	Cucumber (Chinese Long) v2	cuwcgB472
ClCG05G005530	Melon (DHL92) v3.5.1	mewcgB121
ClCG05G005530	Watermelon (97103) v1	wcgwmB311