CmoCh06G008720 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G008720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr06 : 4974220 .. 4976358 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTCTCCCATGGCGCCTCCTCTTTCTTCCCCTCTCGATGTCAAACCAACTCACATGTTCTTCATTTCCCCACTGCGCCCCAACAATTTCACCAAACCCTTAACAGTCCTCTGTACCTCCTCCAAATCCCCTCCAAAACCTTCTCAAATTTCCTCAGAATCAAATGACAGAAAAACCCCATCTCTATCCGAGCAGCTCAAGAATCTCTCCACGACCACGCTTCCCAATGCACCCAAAGACGAATCCCCTCTCCTGTCGAAGCCTAAATCCACCTGGGTGAACCCCACCAAGCCCAAGCGCTCGGTTCTAGCTCTCCAAAGGCAGAAACGCTCTTCTTACTCATATAACCCCAAACGCCGAGACCTTAAAACCTTTGCCCACAAGCTCAACGCCTGTGAATCCTCTGAAAGTGCTTTCATCGCGGCTCTTGAGGAAATCCCACATCCACCCACTAAAGAAAATGCCCTTCTGATTCTCAATAGCTTGAAGCCATGGCAGAAAACTCATCTGTTCTTCAATTGGATCAAGACCCAGAATCTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAGCTTATTGAAGATCTTGCAAATGAGATGATTAGTAGTGGGATTGAGCTTGATAACATTACTTATTCTACCATAATCACTTCTGCTAAAAAGTGTAGTAGATTTGATAAGGCTATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTGACTTACTCTGCTATTTTAGATGTTTATGCTCATTTAGGCAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGGGCTAGTGGTTGGAAGCCTGACACTGTCACATTCTCTTTGTTGGCGAAGATGTTTGGGGAAGCAGGGAATTATGATGGGATTATGTATGTTCTTCAAGAAATGAAGTCTCTAGAGGTGCAGCCTAATCTTGTGGTGTATAACACTCTGTTGGAAGCAATGGGGAAGGCTGGGAAGCCTGGTTTTGCAAGGAGCCTGTTCAACGAAATGATTGAATCGGGGATAACGCCGAATGCGAAGACGTTGACTGCATTGGTTAAGATTTATGGGAAGGCGAGGTGGGCTCGAGATGCTTTAGACTTATGGGAGCGGATGAGGTCGAACGGGTGGCCAATGGACTTCATTTTGTATAATACATTGTTGAGTATGTGTGCTGACCTTGGTTTGGCGGAGGAAGCTGAGAAGCTCTTTGAAGAGATGAAGAGGTCGGAGCAATGTCGACCAGATAGCTGGAGTTACACGGCGATGTTGAATATATATGGTAGCGGAGGTAACGTCGAAAGAGCCATGGAGTTGTTCGAAGAAATGCTGGAGTTGGGTGTTGAGGTTAATGTGATGGGCTGCACTTGTTTGATTCAGTGCTTGGGGAAAGCTGGGAGAATTGATGATCTTGCAAGAGTGTTCGATGTTTTGGTACAAAAAGGGATCAAGCCAGATGACAGACTTTGTGGCTGTTTGCTGTCTGTTGTGTCTTTGTGTGACAATAGTGAAGACATTAACAAGGTATTCGCTTGTCTGCAACAAGCTAACCCAAACTTAGTTGCCTTCATAAACCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAGACGAATTCAGGAACATTCTCGGCAACACTGCAACAGAAGCGCGACGACCTTTCTGCAATTGCCTAATTGATATATGTCGAAACCAAAATCTTCATAAGAGAGCTCATGAGTTGCTTTACTTAGGAAGTATGTATGGATTGTACCCTGGGTTACACAACAAAACCGATGCTGAATGGTGCTTAGATGTTCGATCGCTATCAGTAGGCGCAGCTCAGACTGCACTCGAAGAATGGATGATAACTCTAACGAAGATCGTTCAACGAGAAGAAGCATTGCCAGAATTGTTATCAGCTCAAACCGGTGTAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTTATCTAGAAAAACTTGCTGCTCCATTTCAAATGCAAGAAGACCGGGCTGGGTGGTTTGTAGCCACAAGGGAGGATTTAGTTGCATGGGTGCGTTCAAGTGAACCATCTGTGGCTGCCACAACAGCTTAA

mRNA sequence

ATGCCCTCTCCCATGGCGCCTCCTCTTTCTTCCCCTCTCGATGTCAAACCAACTCACATGTTCTTCATTTCCCCACTGCGCCCCAACAATTTCACCAAACCCTTAACAGTCCTCTGTACCTCCTCCAAATCCCCTCCAAAACCTTCTCAAATTTCCTCAGAATCAAATGACAGAAAAACCCCATCTCTATCCGAGCAGCTCAAGAATCTCTCCACGACCACGCTTCCCAATGCACCCAAAGACGAATCCCCTCTCCTGTCGAAGCCTAAATCCACCTGGGTGAACCCCACCAAGCCCAAGCGCTCGGTTCTAGCTCTCCAAAGGCAGAAACGCTCTTCTTACTCATATAACCCCAAACGCCGAGACCTTAAAACCTTTGCCCACAAGCTCAACGCCTGTGAATCCTCTGAAAGTGCTTTCATCGCGGCTCTTGAGGAAATCCCACATCCACCCACTAAAGAAAATGCCCTTCTGATTCTCAATAGCTTGAAGCCATGGCAGAAAACTCATCTGTTCTTCAATTGGATCAAGACCCAGAATCTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAGCTTATTGAAGATCTTGCAAATGAGATGATTAGTAGTGGGATTGAGCTTGATAACATTACTTATTCTACCATAATCACTTCTGCTAAAAAGTGTAGTAGATTTGATAAGGCTATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTGACTTACTCTGCTATTTTAGATGTTTATGCTCATTTAGGCAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGGGCTAGTGGTTGGAAGCCTGACACTGTCACATTCTCTTTGTTGGCGAAGATGTTTGGGGAAGCAGGGAATTATGATGGGATTATGTATGTTCTTCAAGAAATGAAGTCTCTAGAGGTGCAGCCTAATCTTGTGGTGTATAACACTCTGTTGGAAGCAATGGGGAAGGCTGGGAAGCCTGGTTTTGCAAGGAGCCTGTTCAACGAAATGATTGAATCGGGGATAACGCCGAATGCGAAGACGTTGACTGCATTGGTTAAGATTTATGGGAAGGCGAGGTGGGCTCGAGATGCTTTAGACTTATGGGAGCGGATGAGGTCGAACGGGTGGCCAATGGACTTCATTTTGTATAATACATTGTTGAGTATGTGTGCTGACCTTGGTTTGGCGGAGGAAGCTGAGAAGCTCTTTGAAGAGATGAAGAGGTCGGAGCAATGTCGACCAGATAGCTGGAGTTACACGGCGATGTTGAATATATATGGTAGCGGAGGTAACGTCGAAAGAGCCATGGAGTTGTTCGAAGAAATGCTGGAGTTGGGTGTTGAGGTTAATGTGATGGGCTGCACTTGTTTGATTCAGTGCTTGGGGAAAGCTGGGAGAATTGATGATCTTGCAAGAGTGTTCGATGTTTTGGTACAAAAAGGGATCAAGCCAGATGACAGACTTTGTGGCTGTTTGCTGTCTGTTGTGTCTTTGTGTGACAATAGTGAAGACATTAACAAGGTATTCGCTTGTCTGCAACAAGCTAACCCAAACTTAGTTGCCTTCATAAACCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAGACGAATTCAGGAACATTCTCGGCAACACTGCAACAGAAGCGCGACGACCTTTCTGCAATTGCCTAATTGATATATGTCGAAACCAAAATCTTCATAAGAGAGCTCATGAGTTGCTTTACTTAGGAAGTATGTATGGATTGTACCCTGGGTTACACAACAAAACCGATGCTGAATGGTGCTTAGATGTTCGATCGCTATCAGTAGGCGCAGCTCAGACTGCACTCGAAGAATGGATGATAACTCTAACGAAGATCGTTCAACGAGAAGAAGCATTGCCAGAATTGTTATCAGCTCAAACCGGTGTAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTTATCTAGAAAAACTTGCTGCTCCATTTCAAATGCAAGAAGACCGGGCTGGGTGGTTTGTAGCCACAAGGGAGGATTTAGTTGCATGGGTGCGTTCAAGTGAACCATCTGTGGCTGCCACAACAGCTTAA

Coding sequence (CDS)

ATGCCCTCTCCCATGGCGCCTCCTCTTTCTTCCCCTCTCGATGTCAAACCAACTCACATGTTCTTCATTTCCCCACTGCGCCCCAACAATTTCACCAAACCCTTAACAGTCCTCTGTACCTCCTCCAAATCCCCTCCAAAACCTTCTCAAATTTCCTCAGAATCAAATGACAGAAAAACCCCATCTCTATCCGAGCAGCTCAAGAATCTCTCCACGACCACGCTTCCCAATGCACCCAAAGACGAATCCCCTCTCCTGTCGAAGCCTAAATCCACCTGGGTGAACCCCACCAAGCCCAAGCGCTCGGTTCTAGCTCTCCAAAGGCAGAAACGCTCTTCTTACTCATATAACCCCAAACGCCGAGACCTTAAAACCTTTGCCCACAAGCTCAACGCCTGTGAATCCTCTGAAAGTGCTTTCATCGCGGCTCTTGAGGAAATCCCACATCCACCCACTAAAGAAAATGCCCTTCTGATTCTCAATAGCTTGAAGCCATGGCAGAAAACTCATCTGTTCTTCAATTGGATCAAGACCCAGAATCTGTTTCCTATGGAGACTATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAGCTTATTGAAGATCTTGCAAATGAGATGATTAGTAGTGGGATTGAGCTTGATAACATTACTTATTCTACCATAATCACTTCTGCTAAAAAGTGTAGTAGATTTGATAAGGCTATGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAGGTGACTTACTCTGCTATTTTAGATGTTTATGCTCATTTAGGCAAAGTTGAGGAGGTTCTTAGTTTGTATGAAAGAGGGAGGGCTAGTGGTTGGAAGCCTGACACTGTCACATTCTCTTTGTTGGCGAAGATGTTTGGGGAAGCAGGGAATTATGATGGGATTATGTATGTTCTTCAAGAAATGAAGTCTCTAGAGGTGCAGCCTAATCTTGTGGTGTATAACACTCTGTTGGAAGCAATGGGGAAGGCTGGGAAGCCTGGTTTTGCAAGGAGCCTGTTCAACGAAATGATTGAATCGGGGATAACGCCGAATGCGAAGACGTTGACTGCATTGGTTAAGATTTATGGGAAGGCGAGGTGGGCTCGAGATGCTTTAGACTTATGGGAGCGGATGAGGTCGAACGGGTGGCCAATGGACTTCATTTTGTATAATACATTGTTGAGTATGTGTGCTGACCTTGGTTTGGCGGAGGAAGCTGAGAAGCTCTTTGAAGAGATGAAGAGGTCGGAGCAATGTCGACCAGATAGCTGGAGTTACACGGCGATGTTGAATATATATGGTAGCGGAGGTAACGTCGAAAGAGCCATGGAGTTGTTCGAAGAAATGCTGGAGTTGGGTGTTGAGGTTAATGTGATGGGCTGCACTTGTTTGATTCAGTGCTTGGGGAAAGCTGGGAGAATTGATGATCTTGCAAGAGTGTTCGATGTTTTGGTACAAAAAGGGATCAAGCCAGATGACAGACTTTGTGGCTGTTTGCTGTCTGTTGTGTCTTTGTGTGACAATAGTGAAGACATTAACAAGGTATTCGCTTGTCTGCAACAAGCTAACCCAAACTTAGTTGCCTTCATAAACCTTCTGCAACAAAACGACATTACCTTTGAAGTTGTCAAAGACGAATTCAGGAACATTCTCGGCAACACTGCAACAGAAGCGCGACGACCTTTCTGCAATTGCCTAATTGATATATGTCGAAACCAAAATCTTCATAAGAGAGCTCATGAGTTGCTTTACTTAGGAAGTATGTATGGATTGTACCCTGGGTTACACAACAAAACCGATGCTGAATGGTGCTTAGATGTTCGATCGCTATCAGTAGGCGCAGCTCAGACTGCACTCGAAGAATGGATGATAACTCTAACGAAGATCGTTCAACGAGAAGAAGCATTGCCAGAATTGTTATCAGCTCAAACCGGTGTAGGAACTCACAGGTTTTCTCAAGGACTAGCCAATTCATTTGCTTCTTATCTAGAAAAACTTGCTGCTCCATTTCAAATGCAAGAAGACCGGGCTGGGTGGTTTGTAGCCACAAGGGAGGATTTAGTTGCATGGGTGCGTTCAAGTGAACCATCTGTGGCTGCCACAACAGCTTAA
BLAST of CmoCh06G008720 vs. Swiss-Prot
Match: PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 973.4 bits (2515), Expect = 1.3e-282
Identity = 480/718 (66.85%), Postives = 587/718 (81.75%), Query Frame = 1

Query: 5   MAPPLSSPLDV--------KPTHMFFISP-LRPNNFTKPLTVLCTSSKSPPKPSQISSES 64
           MA  L++ +DV           H  F+ P L   + ++ L + C+S K   +P  +  E 
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLK---QPKTLEEEP 60

Query: 65  NDRKTPSLSEQLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYS 124
              KTPSLSEQLK LS TTL    ++++ +LSKPKS WVNPT+PKRSVL+LQRQKRS+YS
Sbjct: 61  ITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYS 120

Query: 125 YNPKRRDLKTFAHKLNACESSE-SAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFN 184
           YNP+ +DL+ FA KLN+   +E S F++ L+EIPHPP ++NALL+LNSL+ WQKTH FFN
Sbjct: 121 YNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFN 180

Query: 185 WIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKC 244
           W+K+++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIIT AK+C
Sbjct: 181 WVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRC 240

Query: 245 SRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTF 304
           + ++KA+EWFERMYKTGLMPDEVTYSAILDVY+  GKVEEVLSLYER  A+GWKPD + F
Sbjct: 241 NLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAF 300

Query: 305 SLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIE 364
           S+L KMFGEAG+YDGI YVLQEMKS++V+PN+VVYNTLLEAMG+AGKPG ARSLFNEM+E
Sbjct: 301 SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 360

Query: 365 SGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEE 424
           +G+TPN KTLTALVKIYGKARWARDAL LWE M++  WPMDFILYNTLL+MCAD+GL EE
Sbjct: 361 AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEE 420

Query: 425 AEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLI 484
           AE+LF +MK S QCRPD++SYTAMLNIYGSGG  E+AMELFEEML+ GV+VNVMGCTCL+
Sbjct: 421 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLV 480

Query: 485 QCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPN 544
           QCLGKA RIDD+  VFD+ +++G+KPDDRLCGCLLSV++LC++SED  KV ACL++AN  
Sbjct: 481 QCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKK 540

Query: 545 LVAFINLLQQNDITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYL 604
           LV F+NL+      +E VK+EF+ ++  T  EARRPFCNCLIDICR  N H+RAHELLYL
Sbjct: 541 LVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYL 600

Query: 605 GSMYGLYPGLHNKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTG 664
           G+++GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL  I++R+E LPEL  AQTG
Sbjct: 601 GTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTG 660

Query: 665 VGTHRFSQGLANSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAATTA 713
            GTHRFSQGLANSFA +L++L+APF+ Q DR G FVAT+EDLV+W+ S  P +  + A
Sbjct: 661 TGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTSQA 711

BLAST of CmoCh06G008720 vs. Swiss-Prot
Match: PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=3)

HSP 1 Score: 456.4 bits (1173), Expect = 5.5e-127
Identity = 240/613 (39.15%), Postives = 370/613 (60.36%), Query Frame = 1

Query: 93  WVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKTFAHKLNACESSESAFIAALEEIPHPPT 152
           WVNP  P+ S L   R+K    SY+ +   L   A  L+AC+ +E+     +        
Sbjct: 89  WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLF 148

Query: 153 KENALLILNSLKPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEM 212
           +++A++ LN++   +   L  N +        E I YNV MK  R  +  +  E L +EM
Sbjct: 149 EQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEM 208

Query: 213 ISSGIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKV 272
           +  GI+ DN T++TII+ A++     +A+EWFE+M   G  PD VT +A++D Y   G V
Sbjct: 209 LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV 268

Query: 273 EEVLSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTL 332
           +  LSLY+R R   W+ D VTFS L +++G +GNYDG + + +EMK+L V+PNLV+YN L
Sbjct: 269 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRL 328

Query: 333 LEAMGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGW 392
           +++MG+A +P  A+ ++ ++I +G TPN  T  ALV+ YG+AR+  DAL ++  M+  G 
Sbjct: 329 IDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 388

Query: 393 PMDFILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAM 452
            +  ILYNTLLSMCAD    +EA ++F++MK  E C PDSW++++++ +Y   G V  A 
Sbjct: 389 SLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAE 448

Query: 453 ELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVV 512
               +M E G E  +   T +IQC GKA ++DD+ R FD +++ GI PDDR CGCLL+V+
Sbjct: 449 AALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVM 508

Query: 513 SLCDNSEDINKVFACLQQANPNLVAFINLL-QQNDITFEVVKDEFRNILGNTATEARRPF 572
           +    SE+I K+  C+++A P L   + +L ++ +    V K E   ++ +  ++ ++ +
Sbjct: 509 TQTP-SEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAY 568

Query: 573 CNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLHNKTDAEWCLDVRSLSVGAAQTALEEW 632
            NCLID+C N N  +RA E+L LG  Y +Y GL +K+  +W L ++SLS+GAA TAL  W
Sbjct: 569 LNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVW 628

Query: 633 MITLTK-IVQREEALPELLSAQTGVGTHRFS-QGLANSFASYLEKLAAPFQMQEDRAGWF 692
           M  L++  ++  E  P LL   TG G H++S +GLA  F S+L++L APF    D+ GWF
Sbjct: 629 MNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWF 688

Query: 693 VATREDLVAWVRS 703
           + T     AW+ S
Sbjct: 689 LTTSVAAKAWLES 693

BLAST of CmoCh06G008720 vs. Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-46
Identity = 120/497 (24.14%), Postives = 233/497 (46.88%), Query Frame = 1

Query: 216 GIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEV 275
           G + D  TY+T++ +  +  +F    +  + M + G  P+ VTY+ ++  Y     + E 
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418

Query: 276 LSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEA 335
           ++++ + + +G KPD VT+  L  +  +AG  D  M + Q M++  + P+   Y+ ++  
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478

Query: 336 MGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMD 395
           +GKAG    A  LF EM++ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538

Query: 396 FILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELF 455
            + Y+ ++ +    G  EEAE +F EM++     PD   Y  +++++G  GNVE+A + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWY 598

Query: 456 EEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLC 515
           + ML  G+  NV  C  L+    +  +I +   +   ++  G++P  +    LLS  +  
Sbjct: 599 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT-- 658

Query: 516 DNSEDINKVFACLQQANPNLVAFINLLQQ-----NDITFEVVKDEFRNILGNTATEARRP 575
           D    ++  F     A+    A + LL+      +        + F +++ +   E++R 
Sbjct: 659 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 718

Query: 576 FCNCLIDICRNQNLHKRAHELLYLGSMYGLYP-GLHNKTDAEWCLDVRSLSVGAAQTALE 635
             + ++D        + A  +  + +   ++P  L  K+ + W +++  +S G A TAL 
Sbjct: 719 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALS 778

Query: 636 EWMITLTKIVQREEALPELLSAQTGVGTHRFSQG---LANSFASYLEKLAAPFQMQEDRA 695
             +    K +      P  +   TG G      G   +  +    L    +PF  +   +
Sbjct: 779 RTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNS 838

Query: 696 GWFVATREDLVAWVRSS 704
           G FV + E L  W+  S
Sbjct: 839 GCFVGSGEPLNRWLLQS 852

BLAST of CmoCh06G008720 vs. Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.4e-45
Identity = 119/495 (24.04%), Postives = 228/495 (46.06%), Query Frame = 1

Query: 216 GIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEV 275
           G + D  TY+T++ +  +  +F +  +  + M + G  P+ VTY+ ++  Y     ++E 
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413

Query: 276 LSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEA 335
           ++++ + + +G +PD VT+  L  +  +AG  D  M + Q M+   + P+   Y+ ++  
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473

Query: 336 MGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMD 395
           +GKAG    A  LF EM+  G TPN  T   ++ ++ KAR    AL L+  M++ G+  D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533

Query: 396 FILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELF 455
            + Y+ ++ +    G  EEAE +F EM+R     PD   Y  +++++G  GNV++A + +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQWY 593

Query: 456 EEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLC 515
           + ML+ G+  NV  C  L+    +  R+ +   +   ++  G+ P  +    LLS  +  
Sbjct: 594 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 653

Query: 516 DNSEDINKVFACLQQANPNLVAFINLLQQNDITFEVVKDEFRNILG---NTATEARRPFC 575
            ++ D+      +  +      F+  +       + V+D   N L    +   E++R   
Sbjct: 654 RSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLM 713

Query: 576 NCLIDICRNQNLHKRAHELLYLGSMYGLYP-GLHNKTDAEWCLDVRSLSVGAAQTALEEW 635
           + ++D      L + A  +  + +   +YP  L  K+ + W +++  +S G A  AL   
Sbjct: 714 DAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRT 773

Query: 636 MITLTKIVQREEALPELLSAQTGVGTHRFSQG---LANSFASYLEKLAAPFQMQEDRAGW 695
           +    K +      P  +   TG G      G   +  +    L     PF  +   +G 
Sbjct: 774 LAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGC 833

Query: 696 FVATREDLVAWVRSS 704
           FV + E L  W+  S
Sbjct: 834 FVGSGEPLKNWLLES 847

BLAST of CmoCh06G008720 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-41
Identity = 105/409 (25.67%), Postives = 191/409 (46.70%), Query Frame = 1

Query: 182 FPMETIFYNVAMKSLRYGRQFQLIEDLA--NEMISSGIELDNITYSTIITSAKKCSRFDK 241
           F  + + YN  +    YG+  +  E +   NEM+ +G     +TY+++I++  +    D+
Sbjct: 310 FSYDKVTYNALLDV--YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 369

Query: 242 AMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAK 301
           AME   +M + G  PD  TY+ +L  +   GKVE  +S++E  R +G KP+  TF+   K
Sbjct: 370 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 429

Query: 302 MFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITP 361
           M+G  G +  +M +  E+    + P++V +NTLL   G+ G       +F EM  +G  P
Sbjct: 430 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 489

Query: 362 NAKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLF 421
             +T   L+  Y +      A+ ++ RM   G   D   YNT+L+  A  G+ E++EK+ 
Sbjct: 490 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 549

Query: 422 EEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGK 481
            EM+   +C+P+  +Y ++L+ Y +G  +     L EE+    +E   +    L+    K
Sbjct: 550 AEME-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 609

Query: 482 AGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQA--NPNLVA 541
              + +  R F  L ++G  PD      ++S+          N V   +++    P++  
Sbjct: 610 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 669

Query: 542 FINLLQQNDITFEVVKDE--FRNILGNTATEARRPFCNCLIDICRNQNL 585
           + +L+  +  + +  K E   R IL          +   +   CRN  +
Sbjct: 670 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715

BLAST of CmoCh06G008720 vs. TrEMBL
Match: A0A0A0L6K8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011820 PE=4 SV=1)

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 621/709 (87.59%), Postives = 663/709 (93.51%), Query Frame = 1

Query: 5   MAPPLSSPLDVK--PTHMFFISPLRPNNFTKPLTVLCTSSKSPPKPSQISSESNDRKTPS 64
           MA PLSS LD+K  PT +FF SPLR  N TK LT+LC+SSKSP KPS +SS+S D K PS
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60

Query: 65  LSEQLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRD 124
           LSEQLKNLSTTTL NAP DE+ LLSKPKSTWVNPTKPKRSVL+LQRQKRSSYSYNPK RD
Sbjct: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 125 LKTFAHKLNACESSESA-FIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNL 184
           LK+FAHKLNAC+SS+ A FIAALEEIPHPPTKENALLILNSL+PWQKTHLFFNWIK+QNL
Sbjct: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180

Query: 185 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAM 244
           FPMETIFYNVAMKSLRYGRQFQLIEDLANEMIS+GIELDNITYSTIIT AKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 245 EWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMF 304
           EWFERMYKTGLMPDEVTYSAILDVYA+LGKVEEVLSLYERGRASGW PD  TFS+L KMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300

Query: 305 GEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNA 364
           GEAG+YDGIMYVLQEMKS+E+QPNLVVYNTLL+AMGKAGKPGFARSLF+EM+ESGITPN 
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 365 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEE 424
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLL+MCADLGL EEAE LFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420

Query: 425 MKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAG 484
           MK+S+  RPDSWSYTAMLNIYGSGGNV+R+MELFEEMLELGVE+NVM CTCLIQCLGK+G
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480

Query: 485 RIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINL 544
           RIDDL RVF+V VQKGIKPDDRLCGCLLSV+SLC NSEDINKVF CLQQANP LV+FINL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540

Query: 545 LQQNDITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLY 604
           LQQNDITFEVVK+EFRNILG TA EARRPFCNCLIDICRNQNL +RAHELLYLGS+YGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 605 PGLHNKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFS 664
           PGLHNKT+ EWCLDVRSLSVGAAQTALEEWMITL+KIVQREEALPELLSAQTG GTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660

Query: 665 QGLANSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAAT 711
           QGLANSFAS+++KLAAPFQ++EDRAGWFVATREDLV WV S  PSVAAT
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 709

BLAST of CmoCh06G008720 vs. TrEMBL
Match: M5WQE9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002049mg PE=4 SV=1)

HSP 1 Score: 1067.0 bits (2758), Expect = 1.0e-308
Identity = 525/705 (74.47%), Postives = 603/705 (85.53%), Query Frame = 1

Query: 20  MFFISPLRPNNFTKPLTVLCTSSKSPPKP------------SQISSESNDRKTPSLS--E 79
           +FF SP R    TK   + C S+KSPPK             ++ + ++N++K PSLS  E
Sbjct: 20  IFFTSPFRQIP-TKRFNLSCRSTKSPPKSPPDLAEPNSKNNNKKNDDNNNKKNPSLSLSE 79

Query: 80  QLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKT 139
           QL+ L++TTL N PKD+S LLSKPKS WVNP KPKRSVL+LQRQKRS YSYNP+ RDL+ 
Sbjct: 80  QLQPLTSTTLSNPPKDQSQLLSKPKSIWVNPAKPKRSVLSLQRQKRSLYSYNPQVRDLRQ 139

Query: 140 FAHKLNACESSESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNLFPME 199
           FAHKLN C++S++AF+AALEEIPHPPT+ENALLILNSLKPWQKTH+FFNW+K QN FPM+
Sbjct: 140 FAHKLNDCDASQNAFLAALEEIPHPPTRENALLILNSLKPWQKTHMFFNWVKAQNSFPMD 199

Query: 200 TIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAMEWFE 259
           TIFYNV MKSLR+GRQFQLIE+LA EM+S+ IELDNITYSTIIT AK+   FDKA+EWFE
Sbjct: 200 TIFYNVTMKSLRFGRQFQLIEELAEEMVSNEIELDNITYSTIITCAKRSKLFDKAVEWFE 259

Query: 260 RMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMFGEAG 319
           RMYKTGLMPDEVTYSAILDVYA LGKVEEVLSLYERGRASGWKPD + FS+L KMFGEAG
Sbjct: 260 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAG 319

Query: 320 NYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNAKTLT 379
           +YDGI YVLQEM +L VQPNLVVYNTLLEAMGKAGKPG ARSLF EM+ SG+ PN KTLT
Sbjct: 320 DYDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGLKPNEKTLT 379

Query: 380 ALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEEMKRS 439
           ALVKIYGKARWARDAL+LWERMRSN WPMDFILYNTLL+MCADLGL EEA+KLFE+MK+S
Sbjct: 380 ALVKIYGKARWARDALELWERMRSNEWPMDFILYNTLLNMCADLGLEEEAKKLFEDMKQS 439

Query: 440 EQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDD 499
           E CRPDSWSYTAMLNI+GSGGNV+ AM LFEEM ELG+E+NVMGCTCLIQCLGKA R  D
Sbjct: 440 EHCRPDSWSYTAMLNIFGSGGNVDGAMGLFEEMSELGIELNVMGCTCLIQCLGKARRFSD 499

Query: 500 LARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINLLQQN 559
           + RVF V V++G+KPDDRLCGCLLSVVSLC+ +ED +KV +CLQQANP LV  + +LQ  
Sbjct: 500 MVRVFGVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDKVLSCLQQANPKLVTLVKVLQDK 559

Query: 560 DITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLH 619
            + FE +KDEFR+++  T+ E+RRPFCNCLIDICRN+N H+RAHELLYLG++YGLYPGLH
Sbjct: 560 KLGFETIKDEFRDVISGTSVESRRPFCNCLIDICRNKNNHERAHELLYLGTLYGLYPGLH 619

Query: 620 NKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFSQGLA 679
           NKT  EWCLDVRSLS+GAA TALEEWM TL KIVQREEALPEL SAQTG GTH+FSQGLA
Sbjct: 620 NKTSREWCLDVRSLSIGAAHTALEEWMGTLYKIVQREEALPELFSAQTGTGTHKFSQGLA 679

Query: 680 NSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAAT 711
           +SFAS++EKLAAPF+  E++AG FVATREDLV+WV+S  PS A T
Sbjct: 680 HSFASHVEKLAAPFRKSEEKAGRFVATREDLVSWVQSQAPSTAIT 723

BLAST of CmoCh06G008720 vs. TrEMBL
Match: F6HTA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01090 PE=4 SV=1)

HSP 1 Score: 1058.1 bits (2735), Expect = 4.6e-306
Identity = 525/697 (75.32%), Postives = 600/697 (86.08%), Query Frame = 1

Query: 28  PNNFTKP-------LTVLCTSS-------KSPPKPSQISSESNDRKTPSLSEQLKNLSTT 87
           PN F+K         T+ C SS       K  PKP+   SE  + + PSLSEQLK LS T
Sbjct: 26  PNLFSKSTKFSSNTFTIRCNSSSRSPPKPKPKPKPTSSDSEQTNHQNPSLSEQLKPLSKT 85

Query: 88  TLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKTFAHKLNAC 147
            L      ++ L+SKPKSTW+NPTKPK SVL+LQR KR +YSYNP+ RDLK FA K+N  
Sbjct: 86  ILTRDHSGQTHLVSKPKSTWINPTKPKPSVLSLQRHKRHNYSYNPQIRDLKLFAKKINES 145

Query: 148 ESS-ESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNLFPMETIFYNVA 207
           ESS ES F+A LE+IPHPPT++NALL+LNSLKPW KT+LFFNWIKTQNLFPMETIFYNV 
Sbjct: 146 ESSDESEFLAVLEQIPHPPTRDNALLLLNSLKPWPKTYLFFNWIKTQNLFPMETIFYNVT 205

Query: 208 MKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGL 267
           MKSLR+GRQFQLIE+LANEMIS+G+ELDNITYSTIIT AK+C+ FDKA++WFERMYKTGL
Sbjct: 206 MKSLRFGRQFQLIEELANEMISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGL 265

Query: 268 MPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMY 327
           MPDEVTYSAILDVYA LGKVEEVLSLYERGRASGWKPD + F++L KMFGEAG+YDGI Y
Sbjct: 266 MPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRY 325

Query: 328 VLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYG 387
           VLQEMKSL VQPNLVVYNTLLEAMGKAGKPG ARSLF EM+ SG+ P+AKTLTALVKIYG
Sbjct: 326 VLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYG 385

Query: 388 KARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDS 447
           KARWARDAL+LWERMRSNGWPMDFILYNTLLSMCADLGL EEAEKLFE+MK+SE CRPDS
Sbjct: 386 KARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDS 445

Query: 448 WSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDV 507
           WSYTAMLNIYGSGGNV+RAM+LF+EM ELGV++NVMGCTCL QCLG+A RIDDL +VF+V
Sbjct: 446 WSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFEV 505

Query: 508 LVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINLLQQNDITFEVV 567
            +++G+KPDDRLCGCLLSVVS C+ +ED NKV ACLQQANP LVAF+NLL++  I+FE +
Sbjct: 506 SLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQQANPKLVAFVNLLEEK-ISFEAL 565

Query: 568 KDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLHNKTDAEW 627
           K+EFR IL +TA EARRPFCNCLIDICRN++LH+RAHELLYLG++YGLYPGLHN+T  EW
Sbjct: 566 KEEFRGILTDTAVEARRPFCNCLIDICRNRSLHERAHELLYLGTLYGLYPGLHNRTADEW 625

Query: 628 CLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFSQGLANSFASYL 687
           CLDVRSLSVGAA TALEEWM TL+KIVQREEALPE  SA TG GTH+FSQGLA++FAS++
Sbjct: 626 CLDVRSLSVGAAHTALEEWMGTLSKIVQREEALPEAFSANTGTGTHKFSQGLASAFASHV 685

Query: 688 EKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAA 710
           +KLAAPF   E++AG FVATREDLV+WV+S   S AA
Sbjct: 686 KKLAAPFTQSEEKAGCFVATREDLVSWVQSRILSPAA 721

BLAST of CmoCh06G008720 vs. TrEMBL
Match: A0A067KLE7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10617 PE=4 SV=1)

HSP 1 Score: 1043.5 bits (2697), Expect = 1.2e-301
Identity = 507/688 (73.69%), Postives = 593/688 (86.19%), Query Frame = 1

Query: 20  MFFISPLRPNNFTKPLTVLCTSSKSPPKPSQISSES-NDRKTPSLSEQLKNLSTTTLPNA 79
           +FF +PLR ++  + LT+   S +SPP+ SQ   ES N +K PSLS+QLK LS TTL   
Sbjct: 25  IFFTAPLRQSHTRRRLTISSNSFQSPPRTSQNVKESANPKKNPSLSDQLKPLSATTLSTV 84

Query: 80  PKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKTFAHKLNACESSES 139
             +++ LLSKPKSTWVNPT+PKRSVL+LQRQKRS YS NP+ ++L+ FA KLN C+SSES
Sbjct: 85  KSNQTQLLSKPKSTWVNPTRPKRSVLSLQRQKRSPYSLNPEVKELRLFAQKLNECDSSES 144

Query: 140 AFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRY 199
           AF++ LE+IP+PPT+ENALLILNSLKPWQK +LFFNWIKTQNLFPMETIFYNV MKSLR+
Sbjct: 145 AFVSLLEQIPYPPTRENALLILNSLKPWQKAYLFFNWIKTQNLFPMETIFYNVIMKSLRF 204

Query: 200 GRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVT 259
           GRQF+LIE+LA EM+S+ IELDNITYSTIIT AK+C+ FDKA+EWFERMYKTGLMPDEVT
Sbjct: 205 GRQFELIENLAYEMVSNKIELDNITYSTIITCAKRCNLFDKALEWFERMYKTGLMPDEVT 264

Query: 260 YSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMK 319
           YSA LDVYA LGKVEEVLSLYERG ASGWKPD VTFS+LA+MFGEAG+YDGI YVLQEM+
Sbjct: 265 YSATLDVYAKLGKVEEVLSLYERGVASGWKPDPVTFSVLARMFGEAGDYDGIRYVLQEME 324

Query: 320 SLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWAR 379
           SL VQPN+VVYNTLLEA+GKAGKPG ARSLF EM++SG+TPN KT+TA+ KIYGKARWA+
Sbjct: 325 SLGVQPNVVVYNTLLEALGKAGKPGLARSLFEEMVDSGLTPNEKTITAMAKIYGKARWAK 384

Query: 380 DALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAM 439
           DA++LWERMR N WPMDFILYNTLLSMCADLGL EEAE+LFE+MK S+ CRPDSWSYTAM
Sbjct: 385 DAIELWERMRLNNWPMDFILYNTLLSMCADLGLEEEAERLFEDMKGSKHCRPDSWSYTAM 444

Query: 440 LNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGI 499
           LNIYGSGGN  +AMELFEEM  LG+++NVMGCTCLIQCLGKA RIDDL +VF + V++G+
Sbjct: 445 LNIYGSGGNAIKAMELFEEMSGLGIDLNVMGCTCLIQCLGKAKRIDDLVKVFTISVERGV 504

Query: 500 KPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINLLQQNDITFEVVKDEFRN 559
           K DDRLCGCLLSVVSLC+ S D +KV  CLQQANP LVAF+ L+++   +F+ VK++F+ 
Sbjct: 505 KTDDRLCGCLLSVVSLCEESGDADKVITCLQQANPKLVAFVKLIEEEKTSFDTVKEDFKA 564

Query: 560 ILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLHNKTDAEWCLDVRS 619
           ++ NTA EARRPFCNCLIDICR +NL+ RAHELLYLG++YGLYP LHNKT  EW LDVRS
Sbjct: 565 VVSNTAVEARRPFCNCLIDICRKRNLYARAHELLYLGTLYGLYPDLHNKTIDEWSLDVRS 624

Query: 620 LSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFSQGLANSFASYLEKLAAP 679
           LS+GAA TALEEWM TLTK VQR EALP+L SA TG GTH+FSQGLAN+FAS+++KLAAP
Sbjct: 625 LSIGAAHTALEEWMETLTKFVQRNEALPKLFSAHTGTGTHKFSQGLANAFASHVDKLAAP 684

Query: 680 FQMQEDRAGWFVATREDLVAWVRSSEPS 707
           F   E+RAG FVATREDLV WV+S  PS
Sbjct: 685 FTKSEERAGCFVATREDLVTWVQSRSPS 712

BLAST of CmoCh06G008720 vs. TrEMBL
Match: W9RN90_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023300 PE=4 SV=1)

HSP 1 Score: 1043.1 bits (2696), Expect = 1.5e-301
Identity = 517/708 (73.02%), Postives = 598/708 (84.46%), Query Frame = 1

Query: 9   LSSPLDVKPTH-------MFFISPL--RPNNFTKPLTVLCTSSKSPPKPSQISSESNDRK 68
           +S+PLDV  T        +FF SPL  +    T+  T L  S  + PKP        ++K
Sbjct: 6   ISTPLDVHLTKHSDQNKSLFFTSPLFRQIPTTTRTRTTLTISCCTSPKP-------RNKK 65

Query: 69  TPSLSEQLKNLSTTTLPNAPKDES-PLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNP 128
           T SLSEQLK L+TTTL N  + ++  LLSKPKSTWVNPT+PKRSV++LQRQKRS +SYNP
Sbjct: 66  TSSLSEQLKPLTTTTLSNDQEQQNNTLLSKPKSTWVNPTRPKRSVISLQRQKRSPHSYNP 125

Query: 129 KRRDLKTFAHKLNACESSESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKT 188
           + RDL+ FA KLN    SE AF+A L+EIPHPP++ENALLILNSLKPWQ T LFFNW+KT
Sbjct: 126 QVRDLRRFAQKLNNSGDSEEAFMATLKEIPHPPSRENALLILNSLKPWQNTRLFFNWLKT 185

Query: 189 QNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFD 248
           QN FPMETIFYNV MKSLR+GRQFQLIE+LANEMI + IELDNITYSTIIT AK+C  FD
Sbjct: 186 QNSFPMETIFYNVTMKSLRFGRQFQLIEELANEMIRNDIELDNITYSTIITCAKRCKDFD 245

Query: 249 KAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLA 308
           KA+EWFERMYKTG+MPDEVTYSAILDVYA L KVEEVLSLYERGRASGWKPD +TF++L 
Sbjct: 246 KAVEWFERMYKTGMMPDEVTYSAILDVYAQLRKVEEVLSLYERGRASGWKPDAITFAVLG 305

Query: 309 KMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGIT 368
           KMFGEAG++DGI YVLQEM SL V+PNL+VYNTLLEAMGKAGKPG ARSLF EMIESG+T
Sbjct: 306 KMFGEAGDFDGIRYVLQEMGSLGVEPNLIVYNTLLEAMGKAGKPGMARSLFEEMIESGLT 365

Query: 369 PNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKL 428
           PN KTLTALVK+YGKARW RDAL+LWERMRSN WP+DFILYNTLL+MCADLGL EEAE+L
Sbjct: 366 PNEKTLTALVKVYGKARWGRDALELWERMRSNSWPVDFILYNTLLNMCADLGLEEEAERL 425

Query: 429 FEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLG 488
           FE+MKRSE  RPDSWSYTAMLNIYGSGG VE+AME+F+EM ELGVE+NVMGCTCL+QCLG
Sbjct: 426 FEDMKRSESSRPDSWSYTAMLNIYGSGGKVEKAMEMFDEMSELGVELNVMGCTCLVQCLG 485

Query: 489 KAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAF 548
           KA R+DD+ RVF  +V+KG++PDDRLCGCLLSVVS+CD+  D  KV ACLQQANP LV F
Sbjct: 486 KAKRVDDMVRVFSFVVEKGVRPDDRLCGCLLSVVSMCDDVGDEEKVLACLQQANPKLVVF 545

Query: 549 INLLQQNDITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMY 608
           + LLQ  + +F+ VKDEFR+++ +T+ EARRPFCNCLID+CRN+  H+RAHELLYLG++Y
Sbjct: 546 VRLLQGEETSFKTVKDEFRSVISDTSIEARRPFCNCLIDMCRNRGHHERAHELLYLGTLY 605

Query: 609 GLYPGLHNKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTH 668
           GLYPGLHNKT  EWCLDVRSLS+GAAQTALEEWM TL +IVQR+E LPEL SAQTGVGTH
Sbjct: 606 GLYPGLHNKTAKEWCLDVRSLSIGAAQTALEEWMGTLYRIVQRKEELPELFSAQTGVGTH 665

Query: 669 RFSQGLANSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPS 707
           +FSQGLANSFAS+ EKLAAPF+  E++AG FVATREDLV+W +S  P+
Sbjct: 666 KFSQGLANSFASHAEKLAAPFRQSEEKAGCFVATREDLVSWAQSRAPT 706

BLAST of CmoCh06G008720 vs. TAIR10
Match: AT5G46580.1 (AT5G46580.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 973.4 bits (2515), Expect = 7.6e-284
Identity = 480/718 (66.85%), Postives = 587/718 (81.75%), Query Frame = 1

Query: 5   MAPPLSSPLDV--------KPTHMFFISP-LRPNNFTKPLTVLCTSSKSPPKPSQISSES 64
           MA  L++ +DV           H  F+ P L   + ++ L + C+S K   +P  +  E 
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLK---QPKTLEEEP 60

Query: 65  NDRKTPSLSEQLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYS 124
              KTPSLSEQLK LS TTL    ++++ +LSKPKS WVNPT+PKRSVL+LQRQKRS+YS
Sbjct: 61  ITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYS 120

Query: 125 YNPKRRDLKTFAHKLNACESSE-SAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFN 184
           YNP+ +DL+ FA KLN+   +E S F++ L+EIPHPP ++NALL+LNSL+ WQKTH FFN
Sbjct: 121 YNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFN 180

Query: 185 WIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKC 244
           W+K+++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIIT AK+C
Sbjct: 181 WVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRC 240

Query: 245 SRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTF 304
           + ++KA+EWFERMYKTGLMPDEVTYSAILDVY+  GKVEEVLSLYER  A+GWKPD + F
Sbjct: 241 NLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAF 300

Query: 305 SLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIE 364
           S+L KMFGEAG+YDGI YVLQEMKS++V+PN+VVYNTLLEAMG+AGKPG ARSLFNEM+E
Sbjct: 301 SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 360

Query: 365 SGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEE 424
           +G+TPN KTLTALVKIYGKARWARDAL LWE M++  WPMDFILYNTLL+MCAD+GL EE
Sbjct: 361 AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEE 420

Query: 425 AEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLI 484
           AE+LF +MK S QCRPD++SYTAMLNIYGSGG  E+AMELFEEML+ GV+VNVMGCTCL+
Sbjct: 421 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLV 480

Query: 485 QCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPN 544
           QCLGKA RIDD+  VFD+ +++G+KPDDRLCGCLLSV++LC++SED  KV ACL++AN  
Sbjct: 481 QCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKK 540

Query: 545 LVAFINLLQQNDITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYL 604
           LV F+NL+      +E VK+EF+ ++  T  EARRPFCNCLIDICR  N H+RAHELLYL
Sbjct: 541 LVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYL 600

Query: 605 GSMYGLYPGLHNKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTG 664
           G+++GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL  I++R+E LPEL  AQTG
Sbjct: 601 GTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTG 660

Query: 665 VGTHRFSQGLANSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAATTA 713
            GTHRFSQGLANSFA +L++L+APF+ Q DR G FVAT+EDLV+W+ S  P +  + A
Sbjct: 661 TGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTSQA 711

BLAST of CmoCh06G008720 vs. TAIR10
Match: AT4G16390.1 (AT4G16390.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 456.4 bits (1173), Expect = 3.1e-128
Identity = 240/613 (39.15%), Postives = 370/613 (60.36%), Query Frame = 1

Query: 93  WVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKTFAHKLNACESSESAFIAALEEIPHPPT 152
           WVNP  P+ S L   R+K    SY+ +   L   A  L+AC+ +E+     +        
Sbjct: 89  WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLF 148

Query: 153 KENALLILNSLKPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEM 212
           +++A++ LN++   +   L  N +        E I YNV MK  R  +  +  E L +EM
Sbjct: 149 EQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEM 208

Query: 213 ISSGIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKV 272
           +  GI+ DN T++TII+ A++     +A+EWFE+M   G  PD VT +A++D Y   G V
Sbjct: 209 LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV 268

Query: 273 EEVLSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTL 332
           +  LSLY+R R   W+ D VTFS L +++G +GNYDG + + +EMK+L V+PNLV+YN L
Sbjct: 269 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRL 328

Query: 333 LEAMGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGW 392
           +++MG+A +P  A+ ++ ++I +G TPN  T  ALV+ YG+AR+  DAL ++  M+  G 
Sbjct: 329 IDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 388

Query: 393 PMDFILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAM 452
            +  ILYNTLLSMCAD    +EA ++F++MK  E C PDSW++++++ +Y   G V  A 
Sbjct: 389 SLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAE 448

Query: 453 ELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVV 512
               +M E G E  +   T +IQC GKA ++DD+ R FD +++ GI PDDR CGCLL+V+
Sbjct: 449 AALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVM 508

Query: 513 SLCDNSEDINKVFACLQQANPNLVAFINLL-QQNDITFEVVKDEFRNILGNTATEARRPF 572
           +    SE+I K+  C+++A P L   + +L ++ +    V K E   ++ +  ++ ++ +
Sbjct: 509 TQTP-SEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAY 568

Query: 573 CNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLHNKTDAEWCLDVRSLSVGAAQTALEEW 632
            NCLID+C N N  +RA E+L LG  Y +Y GL +K+  +W L ++SLS+GAA TAL  W
Sbjct: 569 LNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVW 628

Query: 633 MITLTK-IVQREEALPELLSAQTGVGTHRFS-QGLANSFASYLEKLAAPFQMQEDRAGWF 692
           M  L++  ++  E  P LL   TG G H++S +GLA  F S+L++L APF    D+ GWF
Sbjct: 629 MNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWF 688

Query: 693 VATREDLVAWVRS 703
           + T     AW+ S
Sbjct: 689 LTTSVAAKAWLES 693

BLAST of CmoCh06G008720 vs. TAIR10
Match: AT1G18900.3 (AT1G18900.3 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 189.5 bits (480), Expect = 7.1e-48
Identity = 120/497 (24.14%), Postives = 233/497 (46.88%), Query Frame = 1

Query: 216 GIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEV 275
           G + D  TY+T++ +  +  +F    +  + M + G  P+ VTY+ ++  Y     + E 
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418

Query: 276 LSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEA 335
           ++++ + + +G KPD VT+  L  +  +AG  D  M + Q M++  + P+   Y+ ++  
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478

Query: 336 MGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMD 395
           +GKAG    A  LF EM++ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538

Query: 396 FILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELF 455
            + Y+ ++ +    G  EEAE +F EM++     PD   Y  +++++G  GNVE+A + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWY 598

Query: 456 EEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLC 515
           + ML  G+  NV  C  L+    +  +I +   +   ++  G++P  +    LLS  +  
Sbjct: 599 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT-- 658

Query: 516 DNSEDINKVFACLQQANPNLVAFINLLQQ-----NDITFEVVKDEFRNILGNTATEARRP 575
           D    ++  F     A+    A + LL+      +        + F +++ +   E++R 
Sbjct: 659 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 718

Query: 576 FCNCLIDICRNQNLHKRAHELLYLGSMYGLYP-GLHNKTDAEWCLDVRSLSVGAAQTALE 635
             + ++D        + A  +  + +   ++P  L  K+ + W +++  +S G A TAL 
Sbjct: 719 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALS 778

Query: 636 EWMITLTKIVQREEALPELLSAQTGVGTHRFSQG---LANSFASYLEKLAAPFQMQEDRA 695
             +    K +      P  +   TG G      G   +  +    L    +PF  +   +
Sbjct: 779 RTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNS 838

Query: 696 GWFVATREDLVAWVRSS 704
           G FV + E L  W+  S
Sbjct: 839 GCFVGSGEPLNRWLLQS 852

BLAST of CmoCh06G008720 vs. TAIR10
Match: AT1G74750.1 (AT1G74750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-46
Identity = 119/495 (24.04%), Postives = 228/495 (46.06%), Query Frame = 1

Query: 216 GIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEV 275
           G + D  TY+T++ +  +  +F +  +  + M + G  P+ VTY+ ++  Y     ++E 
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413

Query: 276 LSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEA 335
           ++++ + + +G +PD VT+  L  +  +AG  D  M + Q M+   + P+   Y+ ++  
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473

Query: 336 MGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYGKARWARDALDLWERMRSNGWPMD 395
           +GKAG    A  LF EM+  G TPN  T   ++ ++ KAR    AL L+  M++ G+  D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533

Query: 396 FILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELF 455
            + Y+ ++ +    G  EEAE +F EM+R     PD   Y  +++++G  GNV++A + +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQWY 593

Query: 456 EEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLC 515
           + ML+ G+  NV  C  L+    +  R+ +   +   ++  G+ P  +    LLS  +  
Sbjct: 594 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 653

Query: 516 DNSEDINKVFACLQQANPNLVAFINLLQQNDITFEVVKDEFRNILG---NTATEARRPFC 575
            ++ D+      +  +      F+  +       + V+D   N L    +   E++R   
Sbjct: 654 RSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLM 713

Query: 576 NCLIDICRNQNLHKRAHELLYLGSMYGLYP-GLHNKTDAEWCLDVRSLSVGAAQTALEEW 635
           + ++D      L + A  +  + +   +YP  L  K+ + W +++  +S G A  AL   
Sbjct: 714 DAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRT 773

Query: 636 MITLTKIVQREEALPELLSAQTGVGTHRFSQG---LANSFASYLEKLAAPFQMQEDRAGW 695
           +    K +      P  +   TG G      G   +  +    L     PF  +   +G 
Sbjct: 774 LAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGC 833

Query: 696 FVATREDLVAWVRSS 704
           FV + E L  W+  S
Sbjct: 834 FVGSGEPLKNWLLES 847

BLAST of CmoCh06G008720 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-42
Identity = 105/409 (25.67%), Postives = 191/409 (46.70%), Query Frame = 1

Query: 182 FPMETIFYNVAMKSLRYGRQFQLIEDLA--NEMISSGIELDNITYSTIITSAKKCSRFDK 241
           F  + + YN  +    YG+  +  E +   NEM+ +G     +TY+++I++  +    D+
Sbjct: 310 FSYDKVTYNALLDV--YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 369

Query: 242 AMEWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAK 301
           AME   +M + G  PD  TY+ +L  +   GKVE  +S++E  R +G KP+  TF+   K
Sbjct: 370 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 429

Query: 302 MFGEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITP 361
           M+G  G +  +M +  E+    + P++V +NTLL   G+ G       +F EM  +G  P
Sbjct: 430 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 489

Query: 362 NAKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLF 421
             +T   L+  Y +      A+ ++ RM   G   D   YNT+L+  A  G+ E++EK+ 
Sbjct: 490 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 549

Query: 422 EEMKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGK 481
            EM+   +C+P+  +Y ++L+ Y +G  +     L EE+    +E   +    L+    K
Sbjct: 550 AEME-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 609

Query: 482 AGRIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQA--NPNLVA 541
              + +  R F  L ++G  PD      ++S+          N V   +++    P++  
Sbjct: 610 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 669

Query: 542 FINLLQQNDITFEVVKDE--FRNILGNTATEARRPFCNCLIDICRNQNL 585
           + +L+  +  + +  K E   R IL          +   +   CRN  +
Sbjct: 670 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715

BLAST of CmoCh06G008720 vs. NCBI nr
Match: gi|449462001|ref|XP_004148730.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sativus])

HSP 1 Score: 1244.2 bits (3218), Expect = 0.0e+00
Identity = 621/709 (87.59%), Postives = 663/709 (93.51%), Query Frame = 1

Query: 5   MAPPLSSPLDVK--PTHMFFISPLRPNNFTKPLTVLCTSSKSPPKPSQISSESNDRKTPS 64
           MA PLSS LD+K  PT +FF SPLR  N TK LT+LC+SSKSP KPS +SS+S D K PS
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPS 60

Query: 65  LSEQLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRD 124
           LSEQLKNLSTTTL NAP DE+ LLSKPKSTWVNPTKPKRSVL+LQRQKRSSYSYNPK RD
Sbjct: 61  LSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 125 LKTFAHKLNACESSESA-FIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNL 184
           LK+FAHKLNAC+SS+ A FIAALEEIPHPPTKENALLILNSL+PWQKTHLFFNWIK+QNL
Sbjct: 121 LKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNL 180

Query: 185 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAM 244
           FPMETIFYNVAMKSLRYGRQFQLIEDLANEMIS+GIELDNITYSTIIT AKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 245 EWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMF 304
           EWFERMYKTGLMPDEVTYSAILDVYA+LGKVEEVLSLYERGRASGW PD  TFS+L KMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMF 300

Query: 305 GEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNA 364
           GEAG+YDGIMYVLQEMKS+E+QPNLVVYNTLL+AMGKAGKPGFARSLF+EM+ESGITPN 
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 365 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEE 424
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLL+MCADLGL EEAE LFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEE 420

Query: 425 MKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAG 484
           MK+S+  RPDSWSYTAMLNIYGSGGNV+R+MELFEEMLELGVE+NVM CTCLIQCLGK+G
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSG 480

Query: 485 RIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINL 544
           RIDDL RVF+V VQKGIKPDDRLCGCLLSV+SLC NSEDINKVF CLQQANP LV+FINL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFINL 540

Query: 545 LQQNDITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLY 604
           LQQNDITFEVVK+EFRNILG TA EARRPFCNCLIDICRNQNL +RAHELLYLGS+YGLY
Sbjct: 541 LQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 605 PGLHNKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFS 664
           PGLHNKT+ EWCLDVRSLSVGAAQTALEEWMITL+KIVQREEALPELLSAQTG GTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRFS 660

Query: 665 QGLANSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAAT 711
           QGLANSFAS+++KLAAPFQ++EDRAGWFVATREDLV WV S  PSVAAT
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 709

BLAST of CmoCh06G008720 vs. NCBI nr
Match: gi|659095679|ref|XP_008448710.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis melo])

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 615/709 (86.74%), Postives = 662/709 (93.37%), Query Frame = 1

Query: 5   MAPPLSSPLD--VKPTHMFFISPLRPNNFTKPLTVLCTSSKSPPKPSQISSESNDRKTPS 64
           MA PLSS LD  +KPT +FF S LR     K LT+LC+SSKSP KPS ISSES D K PS
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLCSSSKSPRKPSSISSESIDNKNPS 60

Query: 65  LSEQLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRD 124
           LS+QLKNLSTTTL NAP DE+ LLSKPKSTWVNPTKPKRSVL+LQRQKRSSYSYNPK RD
Sbjct: 61  LSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRD 120

Query: 125 LKTFAHKLNACESS-ESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNL 184
           LK+FAHKLNAC+SS E++FIAALEEIPHPPTKENALLILNSL+PWQKTHLFFNWIKTQNL
Sbjct: 121 LKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNL 180

Query: 185 FPMETIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAM 244
           FPMETIFYNVAMKSLRYGRQFQLIEDLAN+M+S+GIELDNITYSTIIT AKKCSRFDKAM
Sbjct: 181 FPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKAM 240

Query: 245 EWFERMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMF 304
           EWFERMYKTGLMPDEVTYSAILDVYA+LGKVEEVLSLYERGRASGWKPD  TFS+L KMF
Sbjct: 241 EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKMF 300

Query: 305 GEAGNYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNA 364
           GEAG+YDGIMYVLQEMKS+E+QPNLVVYNTLL+AMGKAGKPGFARSLF+EM+ESGITPN 
Sbjct: 301 GEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNE 360

Query: 365 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEE 424
           KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLL+MCADLGL EEAEKLFEE
Sbjct: 361 KTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEE 420

Query: 425 MKRSEQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAG 484
           MK+S+  RPDSWSYTAMLNIYGSGGNV+R+MELFEEML+LGVE+NVM CTCLIQCLGK+G
Sbjct: 421 MKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKSG 480

Query: 485 RIDDLARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINL 544
           RIDDL RVF+V VQKGIKPDDRLCGCLLSVVSLCDNSEDINKVF CLQQANP LV+F+NL
Sbjct: 481 RIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVNL 540

Query: 545 LQQNDITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLY 604
           LQQN ITFEV+K+EFRNIL  TA+EARRPFCNCLIDICRNQNL +RAHELLYLGS+YGLY
Sbjct: 541 LQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLY 600

Query: 605 PGLHNKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFS 664
           PGLHNKT+ EWCLDVRSLSVGAAQTALEEWMITL+KIVQR+EALPELLSAQTG GTHRFS
Sbjct: 601 PGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRFS 660

Query: 665 QGLANSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAAT 711
           QGLANSFAS+++KLAAPFQ++EDRAGWFVATREDLV WV S  PSV AT
Sbjct: 661 QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPAT 709

BLAST of CmoCh06G008720 vs. NCBI nr
Match: gi|595852519|ref|XP_007210329.1| (hypothetical protein PRUPE_ppa002049mg [Prunus persica])

HSP 1 Score: 1067.0 bits (2758), Expect = 1.4e-308
Identity = 525/705 (74.47%), Postives = 603/705 (85.53%), Query Frame = 1

Query: 20  MFFISPLRPNNFTKPLTVLCTSSKSPPKP------------SQISSESNDRKTPSLS--E 79
           +FF SP R    TK   + C S+KSPPK             ++ + ++N++K PSLS  E
Sbjct: 20  IFFTSPFRQIP-TKRFNLSCRSTKSPPKSPPDLAEPNSKNNNKKNDDNNNKKNPSLSLSE 79

Query: 80  QLKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKT 139
           QL+ L++TTL N PKD+S LLSKPKS WVNP KPKRSVL+LQRQKRS YSYNP+ RDL+ 
Sbjct: 80  QLQPLTSTTLSNPPKDQSQLLSKPKSIWVNPAKPKRSVLSLQRQKRSLYSYNPQVRDLRQ 139

Query: 140 FAHKLNACESSESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNLFPME 199
           FAHKLN C++S++AF+AALEEIPHPPT+ENALLILNSLKPWQKTH+FFNW+K QN FPM+
Sbjct: 140 FAHKLNDCDASQNAFLAALEEIPHPPTRENALLILNSLKPWQKTHMFFNWVKAQNSFPMD 199

Query: 200 TIFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAMEWFE 259
           TIFYNV MKSLR+GRQFQLIE+LA EM+S+ IELDNITYSTIIT AK+   FDKA+EWFE
Sbjct: 200 TIFYNVTMKSLRFGRQFQLIEELAEEMVSNEIELDNITYSTIITCAKRSKLFDKAVEWFE 259

Query: 260 RMYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMFGEAG 319
           RMYKTGLMPDEVTYSAILDVYA LGKVEEVLSLYERGRASGWKPD + FS+L KMFGEAG
Sbjct: 260 RMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAG 319

Query: 320 NYDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNAKTLT 379
           +YDGI YVLQEM +L VQPNLVVYNTLLEAMGKAGKPG ARSLF EM+ SG+ PN KTLT
Sbjct: 320 DYDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGLKPNEKTLT 379

Query: 380 ALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEEMKRS 439
           ALVKIYGKARWARDAL+LWERMRSN WPMDFILYNTLL+MCADLGL EEA+KLFE+MK+S
Sbjct: 380 ALVKIYGKARWARDALELWERMRSNEWPMDFILYNTLLNMCADLGLEEEAKKLFEDMKQS 439

Query: 440 EQCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDD 499
           E CRPDSWSYTAMLNI+GSGGNV+ AM LFEEM ELG+E+NVMGCTCLIQCLGKA R  D
Sbjct: 440 EHCRPDSWSYTAMLNIFGSGGNVDGAMGLFEEMSELGIELNVMGCTCLIQCLGKARRFSD 499

Query: 500 LARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINLLQQN 559
           + RVF V V++G+KPDDRLCGCLLSVVSLC+ +ED +KV +CLQQANP LV  + +LQ  
Sbjct: 500 MVRVFGVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDKVLSCLQQANPKLVTLVKVLQDK 559

Query: 560 DITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLH 619
            + FE +KDEFR+++  T+ E+RRPFCNCLIDICRN+N H+RAHELLYLG++YGLYPGLH
Sbjct: 560 KLGFETIKDEFRDVISGTSVESRRPFCNCLIDICRNKNNHERAHELLYLGTLYGLYPGLH 619

Query: 620 NKTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFSQGLA 679
           NKT  EWCLDVRSLS+GAA TALEEWM TL KIVQREEALPEL SAQTG GTH+FSQGLA
Sbjct: 620 NKTSREWCLDVRSLSIGAAHTALEEWMGTLYKIVQREEALPELFSAQTGTGTHKFSQGLA 679

Query: 680 NSFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAAT 711
           +SFAS++EKLAAPF+  E++AG FVATREDLV+WV+S  PS A T
Sbjct: 680 HSFASHVEKLAAPFRKSEEKAGRFVATREDLVSWVQSQAPSTAIT 723

BLAST of CmoCh06G008720 vs. NCBI nr
Match: gi|645265732|ref|XP_008238288.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Prunus mume])

HSP 1 Score: 1060.4 bits (2741), Expect = 1.3e-306
Identity = 523/704 (74.29%), Postives = 601/704 (85.37%), Query Frame = 1

Query: 20  MFFISPLRPNNFTKPLTVLCTSSKSPPKP----SQISSESNDRKTP---------SLSEQ 79
           +FF SP R    TK   + C S+KSPPK     ++ +S+ N++K           SLSEQ
Sbjct: 20  IFFTSPFRQIP-TKRFNLSCRSTKSPPKSPPDLAEPNSKHNNKKNDNNNKKNSSLSLSEQ 79

Query: 80  LKNLSTTTLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKTF 139
           L+ L++TTL N PK++S LLSKPKS WVNP KPKRSVL+LQRQKRS YSYNP+ RDL+ F
Sbjct: 80  LQPLTSTTLSNPPKEQSQLLSKPKSIWVNPAKPKRSVLSLQRQKRSLYSYNPQVRDLRQF 139

Query: 140 AHKLNACESSESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNLFPMET 199
           AHKLN C++S+SAF+AALEEIPHPPT+ENALLILNSLKPWQKTH+FFNW+K QN FPM+T
Sbjct: 140 AHKLNDCDASQSAFLAALEEIPHPPTRENALLILNSLKPWQKTHMFFNWVKAQNSFPMDT 199

Query: 200 IFYNVAMKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAMEWFER 259
           IFYNV MKSLR+GRQFQLIE+LA EM+S+ IELDNITYSTIIT AK+   FDKA+EWFER
Sbjct: 200 IFYNVTMKSLRFGRQFQLIEELAEEMVSNEIELDNITYSTIITCAKRSKLFDKAVEWFER 259

Query: 260 MYKTGLMPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMFGEAGN 319
           MYKTGLMPDEVTYSAILDVYA LGKVEEVLSLYERGRASGWKPD + FS+L KMFGEAG+
Sbjct: 260 MYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGD 319

Query: 320 YDGIMYVLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNAKTLTA 379
           YDGI YVLQEM +L VQPNLVVYNTLLEAMGKAGKPG ARSLF EM+ SG+ PN KTLTA
Sbjct: 320 YDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGLKPNEKTLTA 379

Query: 380 LVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEEMKRSE 439
           LVKIYGKARWARDAL+LWERMRSN WPMDFILYNTLL+MCADLGL EEA+KLF +MK+SE
Sbjct: 380 LVKIYGKARWARDALELWERMRSNEWPMDFILYNTLLNMCADLGLEEEAKKLFGDMKQSE 439

Query: 440 QCRPDSWSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDDL 499
            CRPDSWSYTAMLNI+GSGGNV+ AM LFEEM ELG+E+NVMGCTCLIQCLGKA R  D+
Sbjct: 440 HCRPDSWSYTAMLNIFGSGGNVDEAMGLFEEMSELGIELNVMGCTCLIQCLGKARRFGDM 499

Query: 500 ARVFDVLVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINLLQQND 559
            RVF V V++G+KPDDRLCGCLLSVVSLC+ +ED +KV +CLQQANP LV  + +LQ   
Sbjct: 500 VRVFGVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDKVLSCLQQANPKLVTLVKVLQDKK 559

Query: 560 ITFEVVKDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLHN 619
           + FE +KDEFR+++  T+ E+RRPFCNCLIDICRN++ H+RAHELLYLG++YGLYPGLHN
Sbjct: 560 LGFETIKDEFRDVISGTSVESRRPFCNCLIDICRNKSNHERAHELLYLGTLYGLYPGLHN 619

Query: 620 KTDAEWCLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFSQGLAN 679
           KT  EWCLDVRSLS+GAA TALEEWM TL KIVQREEALPEL SAQTG GTH+FSQGLA+
Sbjct: 620 KTSKEWCLDVRSLSIGAAHTALEEWMGTLYKIVQREEALPELFSAQTGTGTHKFSQGLAH 679

Query: 680 SFASYLEKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAAT 711
           SFAS++EKLAAPF+  E++AG FVATREDLV+WV+S  PS A T
Sbjct: 680 SFASHVEKLAAPFRKSEEKAGRFVATREDLVSWVQSQAPSTAIT 722

BLAST of CmoCh06G008720 vs. NCBI nr
Match: gi|225427240|ref|XP_002278451.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Vitis vinifera])

HSP 1 Score: 1058.1 bits (2735), Expect = 6.6e-306
Identity = 525/697 (75.32%), Postives = 600/697 (86.08%), Query Frame = 1

Query: 28  PNNFTKP-------LTVLCTSS-------KSPPKPSQISSESNDRKTPSLSEQLKNLSTT 87
           PN F+K         T+ C SS       K  PKP+   SE  + + PSLSEQLK LS T
Sbjct: 26  PNLFSKSTKFSSNTFTIRCNSSSRSPPKPKPKPKPTSSDSEQTNHQNPSLSEQLKPLSKT 85

Query: 88  TLPNAPKDESPLLSKPKSTWVNPTKPKRSVLALQRQKRSSYSYNPKRRDLKTFAHKLNAC 147
            L      ++ L+SKPKSTW+NPTKPK SVL+LQR KR +YSYNP+ RDLK FA K+N  
Sbjct: 86  ILTRDHSGQTHLVSKPKSTWINPTKPKPSVLSLQRHKRHNYSYNPQIRDLKLFAKKINES 145

Query: 148 ESS-ESAFIAALEEIPHPPTKENALLILNSLKPWQKTHLFFNWIKTQNLFPMETIFYNVA 207
           ESS ES F+A LE+IPHPPT++NALL+LNSLKPW KT+LFFNWIKTQNLFPMETIFYNV 
Sbjct: 146 ESSDESEFLAVLEQIPHPPTRDNALLLLNSLKPWPKTYLFFNWIKTQNLFPMETIFYNVT 205

Query: 208 MKSLRYGRQFQLIEDLANEMISSGIELDNITYSTIITSAKKCSRFDKAMEWFERMYKTGL 267
           MKSLR+GRQFQLIE+LANEMIS+G+ELDNITYSTIIT AK+C+ FDKA++WFERMYKTGL
Sbjct: 206 MKSLRFGRQFQLIEELANEMISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGL 265

Query: 268 MPDEVTYSAILDVYAHLGKVEEVLSLYERGRASGWKPDTVTFSLLAKMFGEAGNYDGIMY 327
           MPDEVTYSAILDVYA LGKVEEVLSLYERGRASGWKPD + F++L KMFGEAG+YDGI Y
Sbjct: 266 MPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRY 325

Query: 328 VLQEMKSLEVQPNLVVYNTLLEAMGKAGKPGFARSLFNEMIESGITPNAKTLTALVKIYG 387
           VLQEMKSL VQPNLVVYNTLLEAMGKAGKPG ARSLF EM+ SG+ P+AKTLTALVKIYG
Sbjct: 326 VLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYG 385

Query: 388 KARWARDALDLWERMRSNGWPMDFILYNTLLSMCADLGLAEEAEKLFEEMKRSEQCRPDS 447
           KARWARDAL+LWERMRSNGWPMDFILYNTLLSMCADLGL EEAEKLFE+MK+SE CRPDS
Sbjct: 386 KARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDS 445

Query: 448 WSYTAMLNIYGSGGNVERAMELFEEMLELGVEVNVMGCTCLIQCLGKAGRIDDLARVFDV 507
           WSYTAMLNIYGSGGNV+RAM+LF+EM ELGV++NVMGCTCL QCLG+A RIDDL +VF+V
Sbjct: 446 WSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFEV 505

Query: 508 LVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFACLQQANPNLVAFINLLQQNDITFEVV 567
            +++G+KPDDRLCGCLLSVVS C+ +ED NKV ACLQQANP LVAF+NLL++  I+FE +
Sbjct: 506 SLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQQANPKLVAFVNLLEEK-ISFEAL 565

Query: 568 KDEFRNILGNTATEARRPFCNCLIDICRNQNLHKRAHELLYLGSMYGLYPGLHNKTDAEW 627
           K+EFR IL +TA EARRPFCNCLIDICRN++LH+RAHELLYLG++YGLYPGLHN+T  EW
Sbjct: 566 KEEFRGILTDTAVEARRPFCNCLIDICRNRSLHERAHELLYLGTLYGLYPGLHNRTADEW 625

Query: 628 CLDVRSLSVGAAQTALEEWMITLTKIVQREEALPELLSAQTGVGTHRFSQGLANSFASYL 687
           CLDVRSLSVGAA TALEEWM TL+KIVQREEALPE  SA TG GTH+FSQGLA++FAS++
Sbjct: 626 CLDVRSLSVGAAHTALEEWMGTLSKIVQREEALPEAFSANTGTGTHKFSQGLASAFASHV 685

Query: 688 EKLAAPFQMQEDRAGWFVATREDLVAWVRSSEPSVAA 710
           +KLAAPF   E++AG FVATREDLV+WV+S   S AA
Sbjct: 686 KKLAAPFTQSEEKAGCFVATREDLVSWVQSRILSPAA 721

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP420_ARATH1.3e-28266.85Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... [more]
PP314_ARATH5.5e-12739.15Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... [more]
PPR49_ARATH1.3e-4624.14Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN... [more]
PP123_ARATH2.4e-4524.04Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN... [more]
PP362_ARATH2.7e-4125.67Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0L6K8_CUCSA0.0e+0087.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011820 PE=4 SV=1[more]
M5WQE9_PRUPE1.0e-30874.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002049mg PE=4 SV=1[more]
F6HTA5_VITVI4.6e-30675.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01090 PE=4 SV=... [more]
A0A067KLE7_JATCU1.2e-30173.69Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10617 PE=4 SV=1[more]
W9RN90_9ROSA1.5e-30173.02Uncharacterized protein OS=Morus notabilis GN=L484_023300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G46580.17.6e-28466.85 pentatricopeptide (PPR) repeat-containing protein[more]
AT4G16390.13.1e-12839.15 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G18900.37.1e-4824.14 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74750.11.3e-4624.04 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G02860.11.5e-4225.67 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449462001|ref|XP_004148730.1|0.0e+0087.59PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... [more]
gi|659095679|ref|XP_008448710.1|0.0e+0086.74PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... [more]
gi|595852519|ref|XP_007210329.1|1.4e-30874.47hypothetical protein PRUPE_ppa002049mg [Prunus persica][more]
gi|645265732|ref|XP_008238288.1|1.3e-30674.29PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... [more]
gi|225427240|ref|XP_002278451.1|6.6e-30675.32PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G008720.1CmoCh06G008720.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainPROFILEPS50828SMRcoord: 614..697
score: 11
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 292..320
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 324..369
score: 5.7E-11coord: 397..440
score: 1.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 454..500
score: 4.3E-5coord: 209..266
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 257..291
score: 2.7E-5coord: 292..325
score: 0.0015coord: 363..395
score: 3.3E-5coord: 327..361
score: 6.3E-9coord: 470..501
score: 9.5E-6coord: 222..256
score: 1.9E-5coord: 434..467
score: 5.3E-8coord: 398..431
score: 9.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 220..254
score: 11.093coord: 290..324
score: 9.668coord: 185..219
score: 6.763coord: 325..359
score: 12.441coord: 395..425
score: 10.665coord: 255..289
score: 11.301coord: 431..465
score: 12.057coord: 466..500
score: 10.205coord: 360..394
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 379..531
score: 1.1E-6coord: 228..378
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 574..675
score: 4.1E-254coord: 55..100
score: 4.1E-254coord: 116..506
score: 4.1E
NoneNo IPR availablePANTHERPTHR24015:SF357SUBFAMILY NOT NAMEDcoord: 116..506
score: 4.1E-254coord: 55..100
score: 4.1E-254coord: 574..675
score: 4.1E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 233..464
score: 8.1

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G008720CmoCh16G011170Cucurbita moschata (Rifu)cmocmoB294