CmoCh06G008700 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G008700
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUbiquitin family protein
LocationCmo_Chr06 : 4960566 .. 4966137 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAAAAAAAAAACTAGGTGAAATATAAAGAAAAACATTTCAGCTGGATCCGGTTTGAAGGGATTGCAGACTCTGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTTGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTACGGAAACCTTTCTTCTTCTTCTTCTTCTTCGATATTGATTGATTTTGTTTCATCAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGGTATAATTGCGGTATTCTGCTGATTGCGGGATATTTCTTTCTGTTGTTTGTATCACGGTCGTCTGAAATACTATATGTAGTCTAGGTTTATACTTTCTCTATTGCTTTTCTGTATATACCGCCCTTTTCATGGTGATGCTGGCCCTTTTGATGACTATACATGCTTCAGCTTTCAAAATGTCGTTGTGATGCATGTTTCTCCATATTACACATTTCTTGCTTCGATCTTCTAGGTTCTGGACTATCATTTTTCATATGCTAGTACCTGCTTGGATTCTAGTTACAAATAAAAGCAAGAAAATGTCCCACTGCTGAAAATTGAATCATGATTCTTGCTTATTGATCTTGTTTTTTTTTTTTGTCTAATCGACCTGTCTTGTGTTGTTCGTGGTACTTTGGCTTCTTGTTGCACAGTATCTGTTTCTTTGTTGTTCTGATGCTTTCTATACTGTTCTGAATGGTTTGAGTTTCTATGGGCTTATCATTTGACAATTCAGTTTGAAATCAGTAATTGGATGCCTCCGTTTCTTGTGTAGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGGTATGAACCATTAAGTATTTCAATTGTTGTTCTTAGACAGGAAGCTTAGCTTGAAGCTGTTCTCAATTATCTGTTTCGCATCAATGGTTACATTTTCAGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGGTAATAATCATATACTAAATTATGCCAAGAAGTTCTATGTACGAATTTTCTAATTTCATTTTGGTTCTTTGTTCTGTGAATAGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATGTAAGTAATAATGTTCTGTTAGTTACTAGATTTTGAATTTTGGTGCCATTATTTTCGGTAGTTGACATTTTATGGCAACCTTAGGAGCTGTTTCTTAAACAGTTCTGCAAATCAGTTTTTCAAAAATATTTTTAGTATTGCAACATAATTAACAAGTGTCTTAGAATATGGTTTCACTGTGTTTGATCATTGTTATCCCATTGTGTGGTCTGAAAAAACCAATTTCAATTGTTCTTAAAAAATCAACACATTTTGCAGATAATAAAGCAAGAGAAAACAATTTTTAGCACACAATTACTTCAAAATGTTATCAAATTGGAGTATTTGGTGCGGAAAATTACTGTTTTTCAATTTGACTTTCGTAAATCCTCTCATTTTTTTGGGTAGTGTCTTCTCTCAGCAAGTGACAATTTCTATTCTCCATATACTTTTTTGAAGCTGAAGTACCTTATTCTAGTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTGCTACGTTTGAGTAATTTTTGCAGATACTTGGCACTGGCTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGGTAAGTAGTATTTGAGAGAAACTCTCATCCCATTCATGTCCAGCTGAGTTGTAGAAGGACTTTTGTATGCTTTAGATAAACTAAGTCAAGGCATGATTGTGTGTTTATACATTCTCCAATCTCATGGCTTGTCCAGTTGTTTGTTCTTAAATGTGTTCGGTCCCTACACATTTGTGGAAAAGGAAAAGTATGCGGTTAAAGGGTAACAATAAGAATGGGTGACGATGCAAATTGATTAGTAGAGGTGGGAATTAGAAAGAATAAGAACCTAGGAAGCTGGTGAGAACTATAGCATAATGAAATACTTATAGCTAGGGGTGTCAAAAGAGAAGATGTTATTCTTTAGGTGGTGCTCGGAAGTCTCAATTTCTCCCTCTTGTTTGTGCAACTTTCCACTATTTTTCAATTACATATCTACTGAGTAGTGGTACTCGAATAATCGGTTCCTAGGACTTGATGGTTGCAAATAGGAAAATAGAGAATCGCTTGGAAGCAATTGAGGAGAAGTTACTATAATGTTTAAATAGACTTGTCGGTAATGCATTGGGCAGGGGATGCAGGAAATGCACAAGGAGATGAGCCATTTGATGGAATACTATATGGAAAATATAATGAATATTGAGTTTGGGGCTAATCTTGTGCCAACCTCAGAAAATAAGGATAAGGTTCCAATCATACAAGCAAAGTATGGCATCAATTAAGTGCTAGATTAAGGAAGGGGGAAGGCTTCGATAGGATCATCATCTAGAACAAGGGGGAAGGGCATCATAGAGAACTAATGAGGATCCAAAGTGGAGATTTGAAATGGAAATTTCTAGTGACCCGCTGTGACCTGCTATCCTTAGCTGAGTGATACTTGAACGATCATAAATTGATTGAGAAGATTGTGGTAGCAACACTTCAATGTTAATAAATTGGTTGAGGAGAAGCTTGAGCGGGCAACAATGTATATGAAGGGAGAGGCATTGAAATGGTTTTAGCAGGAGGAAAGATGCAAGTCTTTCAAAAATTGGATTGGGTAGCAAGGAAAAAGATAGTTGCTAAGGCTACTTTGGAAATTGCAAGAGGAATCACACTCGAGAGATTTCGAGCTGTGTAATTAGAGACTACCATGAGGGAGTATGAAAGGCATTTCAGCATCATTGATTGGCATAACATGATGGGTTCTGGATGGTGAAGTAAGAATTATTCCATAGGCACTTGTGTCAGCTGCCAGTGATGCTCATCTATGGTCAAGAACCTGGCATAGAGGAAGAATAATATCTAACAGAGGAGGATATGGTGGTACATACAGAATATCTAATAGCTGATATGGTGCCATAGATACAATAAAAAAGAGATTCGTTAAAAAATGGAGTGGAGTAGAGAGGTGCATTGTGATGAAATTGTTGATGGGGTTGTCATTGATTTCAATGGTGGGCTTTGATATATACATACATATATATTAGTTCAACCAACAACAATGGTGGAGTGGAGATTCGAATCTATGATGGTAGAAGATATACTTAATTAGTTGAGCTAAGTTCAGATTGGATGGGTTTGATATATATTTTAGTATGATGAAGAACTACGGGATGGATATGAGGAGAGGTGATAGATATAGTATTTTAATCAGTTGAATTATGCTCACGTTGGTTGGACTTCGATATATTTTCTAGGACGATAGAGATCGAGGGATAACTATGAGCAAAGGTGATTGATATAATATATTAACCAGTTGAGTTATACTCAGGTTGGGTTTGATATATTTTCTAGGATGTTGAAGATCACGGGATGAATATAAGGAGAGGCGATAGCGTTAACTGTTTGTGGTGAGACAATTTTATTTCGAAGAAATTGTAGAACCCTTAGGATTGCCAACGACCGAAACTTCAAGTTATGGAGTAGTAATGAATGGGCAGAATATTTGTTCAAGGGGGTAATACAAATGTGTGACAAGAGGAGCTGATGCTTTCAGATTCAAGACTGGGGGTTTTCTTGAGGGTCATTAACGATAAGTTAAGGATTATGACACAAGTCTTTGACAAAAGCAGATAGATGAGGAAATTGATAAATAATGTATCAAGGAGAAGCTGTGACAAGGTACCTCTTCCATTTCAGGTACTTGATGCATCATGCTTCATTATGTCACAATAATAATTGCATGAGCTCAAGCTGAGAATGTAGTCAATAATTTCTTTCGTGGAGTTGCTTGTTTACGTGGGGTTCCTGGAAGTACTGTCCCCGATCATGATCGTAGTTAGACTAGTAATATTTTGTCAAAACTATTTAAATGGCAAGGCATGTTCTCCTTGTCATCCAATTTGAGGTGATTAGTTGAGGACAAGGATCGTAATTTGCTCTAACGAAACCCGAACCATAAGCTTGTTTGCAACTTGTGATAACTTGCGTAGATAGTGCTTCAGTTGCGTAGTTTAACATTTGTGATGGGTATGTGTAAGCGGACCACATAAGTACTGATTCAATGGAAAGGGATGTGTGCTGATGATGTCACATGGGATCCAGCCATCACATAATATCCATTTGTAACCTCTCTTTGCCTCGAGGGCAGCGTTGCTATTTGAGGTCGGGGGTACTGGACGGCCCCTGACCCAAACAAAATGCAATGGAAGGAGATGGAAGATGATTGGGCAATGCATCTGCACAGTGATGTAAACTGATTAGAGGAAGCCCACCGTTAGCAGATCTTGTCCGCTTAGATTCATTACATATTACCATCAGTCTCACTCTTTTAAAATGCGTCTACTAGGGAGAAGTTTCCACGCTCCTATAAAAAAATATTTTGTTCTTCTCTCCACCTGACGTGGGATCTTACATAGGAATTAATAGGAATCTAGGAGGTTCATTAGGGAACACCAACATGTAAATACATATAGCAAGACGGTAACAGAAAGAGTGATTAACGGGATACTAGAGCAATTGAAAGTTCTTGAATTCTCCCTATTATAAGAATAACGTCCAAATAGTTTTCATCAACATTTCCACGTCAGGTGTATTAAAAATGTTGTGTGAATGCAATCTCTTTCAGCCTCTATATGGGCTCATTAATTACAGGTTTTATGTGCATGGTAGCTTGCATGATGACACTGTTATATTGCGAACATTATTCTGAGGTGTGAATGTCGAATTTTTGCAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGTAAAATGATTGATTGGCATTTGTTGTGTTGTGTTGTGTTTGATGAAAGACCAACAACACATTTAGAAGGGAAAACCATGATTATAAATTGGTCCA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAACTAGGTGAAATATAAAGAAAAACATTTCAGCTGGATCCGGTTTGAAGGGATTGCAGACTCTGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTTGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATATACTTGGCACTGGCTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGTAAAATGATTGATTGGCATTTGTTGTGTTGTGTTGTGTTTGATGAAAGACCAACAACACATTTAGAAGGGAAAACCATGATTATAAATTGGTCCA

Coding sequence (CDS)

ATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATATACTTGGCACTGGCTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGA
Homology
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BLAST of CmoCh06G008700 vs. TrEMBL
Match: A0A0A0L1Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011840 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 2.3e-116
Identity = 209/240 (87.08%), Postives = 226/240 (94.17%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNR+I+GG +SSI+   PP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE ++LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILLMV+FSLSLK WAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

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BLAST of CmoCh06G008700 vs. TrEMBL
Match: B9N2Q0_POPTR (Ubiquitin family protein OS=Populus trichocarpa GN=POPTR_0003s08770g PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.7e-82
Identity = 152/211 (72.04%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 30  NTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDD 89
           N  EIT++TIGP+ PSRLL+PSPIKV DLRKLVAE   LPI NL+LILRG +L D +++D
Sbjct: 22  NMAEITVKTIGPSPPSRLLLPSPIKVRDLRKLVAENRHLPIENLRLILRGNVLHDSRDED 81

Query: 90  DVFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLK 149
           D+  RLN+GDSL VAVKPKPPA+HLRD  DDD+DDLKF+LP+S+SR K+++Y FL +KLK
Sbjct: 82  DI--RLNNGDSLIVAVKPKPPAKHLRDGFDDDDDDLKFQLPQSASRWKRRLYFFLHDKLK 141

Query: 150 FPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEM 209
            PDILLM +FSLSLKAWA  ++WFI+APVAH WDLGP+YI+GTGF IILLNLG R++G++
Sbjct: 142 LPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQAGDL 201

Query: 210 SAYSIFNEGFRELPGTLNADRLDRDVRLGQF 241
           SAYSIFNE FRELPGTLNADRLDRD+R GQF
Sbjct: 202 SAYSIFNEDFRELPGTLNADRLDRDIRAGQF 230

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BLAST of CmoCh06G008700 vs. TrEMBL
Match: A0A067K112_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19318 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.0e-80
Identity = 154/239 (64.44%), Postives = 193/239 (80.75%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  + N++ SG  +S I   +  +N +EIT++TIGP+ PSRLLVPS IKV DLRK
Sbjct: 1   MAEIVE-EDINQSTSGSTSSEIDKYDDKKNLVEITLKTIGPSPPSRLLVPSRIKVHDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           L++E + LPI  L+LILRGK+L D +++DD+ ++L + DSL VAVKP PPA+HLRD  DD
Sbjct: 61  LISENNHLPIEKLRLILRGKVLHDSRDEDDIQIQLKNSDSLIVAVKPNPPAKHLRDGFDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           D DDLKF+LP+S+SR K+++Y FL +KLK P ILLM +FSLSLK W  I++WFI+APVAH
Sbjct: 121 D-DDLKFQLPQSTSRWKRRLYFFLHDKLKLPGILLMALFSLSLKVWILIILWFILAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
            WDLGPLYILGTGF II  NLG R++G++SAYSIFNE FRELPGTLNADRLDRD+R GQ
Sbjct: 181 RWDLGPLYILGTGFSIIFFNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 237

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BLAST of CmoCh06G008700 vs. TrEMBL
Match: B9S1H9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0865190 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79
Identity = 147/214 (68.69%), Postives = 180/214 (84.11%), Query Frame = 1 

Query: 26  NPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDC 85
           N  +N +EIT++TIGP+  SRLLVPSPIKV DLRKL+AE   LPI NL+LILRG +L D 
Sbjct: 16  NNKQNLVEITLKTIGPSPSSRLLVPSPIKVRDLRKLIAEDHHLPIQNLRLILRGNVLQDS 75

Query: 86  KNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLR 145
           K+DDD +++L++ DSL VAVKPKPPA+HL D  D D+DDLKF+LP+S+SR K++IY+FL 
Sbjct: 76  KHDDDAYIKLSNSDSLIVAVKPKPPAKHLHDGFDFDDDDLKFQLPQSTSRWKRRIYSFLH 135

Query: 146 EKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRR 205
           +KLK  DILLM +FSLSLKAWA I++WF +APVAH WDLGPLY+LGTGF II  NLG R+
Sbjct: 136 DKLKISDILLMALFSLSLKAWAVIVLWFGLAPVAHRWDLGPLYMLGTGFSIIFFNLGRRQ 195

Query: 206 SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           +G++SAYSIFNE FRELPGTLNADRLDRD+R GQ
Sbjct: 196 AGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 229

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BLAST of CmoCh06G008700 vs. TrEMBL
Match: A0A059CIA7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02180 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.0e-79
Identity = 151/215 (70.23%), Postives = 176/215 (81.86%), Query Frame = 1 

Query: 27  PPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCK 86
           P    + I +RTIGPARPSRL VPSP+KV DLRKL+AE+S LPIG+L+LILRGK+LDD K
Sbjct: 9   PERKEVVIVLRTIGPARPSRLPVPSPVKVHDLRKLIAEKSHLPIGDLRLILRGKVLDDTK 68

Query: 87  NDDDVFVRLNHGDSLTVAVKPKPPAEHLRD--DSDDDEDDLKFRLPESSSRLKKKIYNFL 146
           + DD+ V L  GDSL  AVKPK P +   D  D+DDDEDDLKF LP+SSS  K+K++N L
Sbjct: 69  DGDDMCVELIDGDSLIAAVKPKSPVKRSHDGVDTDDDEDDLKFHLPQSSSWWKRKMFNLL 128

Query: 147 REKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHR 206
            +KLK PDILLM IFSLSLK W  I++WFI+APVA+ WDLGPLYIL TGF IILLNLG R
Sbjct: 129 HDKLKLPDILLMAIFSLSLKTWVLIILWFILAPVAYRWDLGPLYILATGFMIILLNLGQR 188

Query: 207 RSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           +SG++SAYSIFNEGFRELPGTLNADRLDRD+R GQ
Sbjct: 189 QSGDLSAYSIFNEGFRELPGTLNADRLDRDIRTGQ 223

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BLAST of CmoCh06G008700 vs. TAIR10
Match: AT2G35360.1 (AT2G35360.1 ubiquitin family protein)

HSP 1 Score: 265.4 bits (677), Expect = 3.4e-71
Identity = 130/209 (62.20%), Postives = 163/209 (77.99%), Query Frame = 1 

Query: 31  TIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDDD 90
           T+EIT +TIGPARPS++ V S IK+ DLR  +AE+ + P+  L++ILRGK L D ++ DD
Sbjct: 17  TVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGKFPVSTLRMILRGKALQDEEDGDD 76

Query: 91  VFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLKF 150
           ++V L   DS  VAV P PPA  +    DDD+DDLKF+LP S+SR K+K+Y FLR KLK 
Sbjct: 77  LYVTLKDQDSFIVAVIPNPPAG-VESFDDDDDDDLKFKLPPSASRWKRKLYYFLRNKLKL 136

Query: 151 PDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEMS 210
           PDI+LM +FSLSLK W  I +WFI+AP+AH WDLGP++ILGTGF IILLNLG R+ G++S
Sbjct: 137 PDIILMGLFSLSLKMWVIITLWFILAPIAHRWDLGPIFILGTGFSIILLNLGKRQPGDVS 196

Query: 211 AYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           AYSIFNE FRELPGT NADR+DRD+R GQ
Sbjct: 197 AYSIFNEDFRELPGTYNADRIDRDIRAGQ 224

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BLAST of CmoCh06G008700 vs. NCBI nr
Match: gi|449461997|ref|XP_004148728.1| (PREDICTED: uncharacterized protein LOC101223066 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 3.3e-116
Identity = 209/240 (87.08%), Postives = 226/240 (94.17%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNR+I+GG +SSI+   PP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE ++LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILLMV+FSLSLK WAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]
BLAST of CmoCh06G008700 vs. NCBI nr
Match: gi|659095689|ref|XP_008448715.1| (PREDICTED: uncharacterized protein LOC103490803 [Cucumis melo])

HSP 1 Score: 414.5 bits (1064), Expect = 1.3e-112
Identity = 206/240 (85.83%), Postives = 220/240 (91.67%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNIS          NPP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRNISNR--------NPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE S+LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESSRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILL+V+FSLSLK WAAIL+WFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLVVVFSLSLKGWAAILLWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 232

[Close]
BLAST of CmoCh06G008700 vs. NCBI nr
Match: gi|566161650|ref|XP_006385626.1| (ubiquitin family protein [Populus trichocarpa])

HSP 1 Score: 312.8 bits (800), Expect = 5.3e-82
Identity = 152/211 (72.04%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 30  NTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDD 89
           N  EIT++TIGP+ PSRLL+PSPIKV DLRKLVAE   LPI NL+LILRG +L D +++D
Sbjct: 22  NMAEITVKTIGPSPPSRLLLPSPIKVRDLRKLVAENRHLPIENLRLILRGNVLHDSRDED 81

Query: 90  DVFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLK 149
           D+  RLN+GDSL VAVKPKPPA+HLRD  DDD+DDLKF+LP+S+SR K+++Y FL +KLK
Sbjct: 82  DI--RLNNGDSLIVAVKPKPPAKHLRDGFDDDDDDLKFQLPQSASRWKRRLYFFLHDKLK 141

Query: 150 FPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEM 209
            PDILLM +FSLSLKAWA  ++WFI+APVAH WDLGP+YI+GTGF IILLNLG R++G++
Sbjct: 142 LPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQAGDL 201

Query: 210 SAYSIFNEGFRELPGTLNADRLDRDVRLGQF 241
           SAYSIFNE FRELPGTLNADRLDRD+R GQF
Sbjct: 202 SAYSIFNEDFRELPGTLNADRLDRDIRAGQF 230

[Close]
BLAST of CmoCh06G008700 vs. NCBI nr
Match: gi|743848373|ref|XP_011028216.1| (PREDICTED: uncharacterized protein LOC105128309 isoform X1 [Populus euphratica])

HSP 1 Score: 312.4 bits (799), Expect = 6.9e-82
Identity = 152/212 (71.70%), Postives = 184/212 (86.79%), Query Frame = 1 

Query: 30  NTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDD 89
           N  EIT++TIGP+ PSRLL+PSPIKVCDLRKLVAE   LPI NL+LILRG +L D +++D
Sbjct: 22  NMAEITVKTIGPSPPSRLLLPSPIKVCDLRKLVAENRHLPIENLRLILRGNVLHDSRDED 81

Query: 90  DVFVRLNHGDSLTVAVKPKPPAEHLRDD-SDDDEDDLKFRLPESSSRLKKKIYNFLREKL 149
           D++  LN+GDSL VAVKPKPPA+HLRD   DDD+DDLKF+LP+S+SR K+++Y FL +KL
Sbjct: 82  DIW--LNNGDSLIVAVKPKPPAKHLRDGFDDDDDDDLKFQLPQSASRWKRRLYFFLHDKL 141

Query: 150 KFPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGE 209
           K PDILLM +FSLSLKAWA  ++WFI+APVAH WDLGP+YI+GTGF IILLNLG R++G+
Sbjct: 142 KLPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQAGD 201

Query: 210 MSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 241
           +SAYSIFNE FRELPGTLNADRLDRD+R GQF
Sbjct: 202 LSAYSIFNEDFRELPGTLNADRLDRDIRAGQF 231

[Close]
BLAST of CmoCh06G008700 vs. NCBI nr
Match: gi|802673341|ref|XP_012081589.1| (PREDICTED: uncharacterized protein LOC105641613 [Jatropha curcas])

HSP 1 Score: 307.0 bits (785), Expect = 2.9e-80
Identity = 154/239 (64.44%), Postives = 193/239 (80.75%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  + N++ SG  +S I   +  +N +EIT++TIGP+ PSRLLVPS IKV DLRK
Sbjct: 1   MAEIVE-EDINQSTSGSTSSEIDKYDDKKNLVEITLKTIGPSPPSRLLVPSRIKVHDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           L++E + LPI  L+LILRGK+L D +++DD+ ++L + DSL VAVKP PPA+HLRD  DD
Sbjct: 61  LISENNHLPIEKLRLILRGKVLHDSRDEDDIQIQLKNSDSLIVAVKPNPPAKHLRDGFDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           D DDLKF+LP+S+SR K+++Y FL +KLK P ILLM +FSLSLK W  I++WFI+APVAH
Sbjct: 121 D-DDLKFQLPQSTSRWKRRLYFFLHDKLKLPGILLMALFSLSLKVWILIILWFILAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
            WDLGPLYILGTGF II  NLG R++G++SAYSIFNE FRELPGTLNADRLDRD+R GQ
Sbjct: 181 RWDLGPLYILGTGFSIIFFNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 237

The following BLAST results are available for this feature:
BLAST of CmoCh06G008700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh06G008700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1Y1_CUCSA2.3e-11687.08Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011840 PE=4 SV=1[more]
B9N2Q0_POPTR3.7e-8272.04Ubiquitin family protein OS=Populus trichocarpa GN=POPTR_0003s08770g PE=4 SV=1[more]
A0A067K112_JATCU2.0e-8064.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19318 PE=4 SV=1[more]
B9S1H9_RICCO1.3e-7968.69Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0865190 PE=4 SV=1[more]
A0A059CIA7_EUCGR5.0e-7970.23Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02180 PE=4 SV=1[more]
BLAST of CmoCh06G008700 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35360.13.4e-7162.20 ubiquitin family protein[more]
BLAST of CmoCh06G008700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461997|ref|XP_004148728.1|3.3e-11687.08PREDICTED: uncharacterized protein LOC101223066 [Cucumis sativus][more]
gi|659095689|ref|XP_008448715.1|1.3e-11285.83PREDICTED: uncharacterized protein LOC103490803 [Cucumis melo][more]
gi|566161650|ref|XP_006385626.1|5.3e-8272.04ubiquitin family protein [Populus trichocarpa][more]
gi|743848373|ref|XP_011028216.1|6.9e-8271.70PREDICTED: uncharacterized protein LOC105128309 isoform X1 [Populus euphratica][more]
gi|802673341|ref|XP_012081589.1|2.9e-8064.44PREDICTED: uncharacterized protein LOC105641613 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR019387Uncharacterised_SAYSvFN
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G008700.1CmoCh06G008700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 32..84
score: 11
IPR019387Uncharacterised domain SAYSvFNPFAMPF10260SAYSvFNcoord: 169..234
score: 7.4
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 24..108
score: 1.
NoneNo IPR availablePANTHERPTHR13527UNCHARACTERIZEDcoord: 18..240
score: 8.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G008700Cucsa.321680Cucumber (Gy14) v1cgycmoB0893
CmoCh06G008700CmaCh06G008450Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G008700Csa3G011840Cucumber (Chinese Long) v2cmocuB815
CmoCh06G008700MELO3C013865Melon (DHL92) v3.5.1cmomeB756
CmoCh06G008700ClCG10G001830Watermelon (Charleston Gray)cmowcgB730
CmoCh06G008700CSPI03G01870Wild cucumber (PI 183967)cmocpiB823
CmoCh06G008700Lsi07G012190Bottle gourd (USVL1VR-Ls)cmolsiB766
CmoCh06G008700Cp4.1LG00g02710Cucurbita pepo (Zucchini)cmocpeB756
CmoCh06G008700MELO3C013865.2Melon (DHL92) v3.6.1cmomedB861
CmoCh06G008700CsaV3_3G001910Cucumber (Chinese Long) v3cmocucB0961
CmoCh06G008700Cla97C10G186440Watermelon (97103) v2cmowmbB819
CmoCh06G008700Bhi11G000115Wax gourdcmowgoB0973
CmoCh06G008700CsGy3G001740Cucumber (Gy14) v2cgybcmoB409
CmoCh06G008700Carg12078Silver-seed gourdcarcmoB0770
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G008700Watermelon (97103) v2cmowmbB848
CmoCh06G008700Cucurbita moschata (Rifu)cmocmoB294
CmoCh06G008700Cucurbita moschata (Rifu)cmocmoB438
CmoCh06G008700Cucumber (Gy14) v1cgycmoB0875
CmoCh06G008700Cucurbita maxima (Rimu)cmacmoB343
CmoCh06G008700Cucurbita maxima (Rimu)cmacmoB623
CmoCh06G008700Wild cucumber (PI 183967)cmocpiB828
CmoCh06G008700Cucumber (Chinese Long) v2cmocuB820
CmoCh06G008700Melon (DHL92) v3.5.1cmomeB746
CmoCh06G008700Watermelon (97103) v1cmowmB777
CmoCh06G008700Cucurbita pepo (Zucchini)cmocpeB770
CmoCh06G008700Cucurbita pepo (Zucchini)cmocpeB792
CmoCh06G008700Cucumber (Gy14) v2cgybcmoB414
CmoCh06G008700Silver-seed gourdcarcmoB0963
CmoCh06G008700Silver-seed gourdcarcmoB1059
CmoCh06G008700Cucumber (Chinese Long) v3cmocucB0966