Cp4.1LG00g02710 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g02710
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin family protein
LocationCp4.1LG00 : 8547766 .. 8553402 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTTGGTGAAATATAAAGAAAAACATTTCAGCTGGATCCGGTTTGAAGGGATTGCAGACTCTGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTGGAAGGCGTAGCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGCACCCAATTCGAGCGTCAGCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTACGGAAACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTATATCGATTGGTTTTGTTTCATCAGGTGTGCGACTTGCGGAAGCTGGTCGCGGAGCGCAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGATGACTCTAAAAATGACGATGATGTCTTTGTGCGGCTCAATCATGGCGGTATAATTGCGGTATTCTGCTGATTGCGGGATATTTCATTCTGTTGTTTGTATCATGGTCGTATGAAATACTATTTGTAGTCTAGGTTTTTACTTTCTCTATTGCTTTTCTTTCGGCATGACCCGATGAAAAAACGATCTTATTTTAATGTGCTTGCTGTTTATATTTCTATATAAACCGCACTTTTCATGGTGATGCTGGCCCCTTTGATGACTATACATGCTTCAGCTTTCAAAATGTCATTGTGGTGCATGTTTCTCCATATTACACATTTCTTGCTTCGATCTTCTAGGTTCTGGACTATCATTTTTCATATGCTAGTACCTGCTTGGATTCTAGTTACAAATAAAAGCAAGAAAATGTCTCCACCGCTGAAAATTGAATCATGATTCTTGCTTATTGATCTTGTTTTTTTTTTTTTTTTGTCTAATCGACCTGTCTTCTGTTGTTCGTGGTACTTTGGCCTCTTGTTGCACAATATCTGTTTCTTCGTTGTTCTGAATGATTTGAGTTTCTATGGGCTCTCATTTGACAATTCAGTTTGAAATCAGTAATTGGATGCCTCCGTTTCTTGTGTAGATTCATTGACTGTTGCTGTGAAACCAAGGCCCCCAGCCGAACATCTTCGTGATGATTCTGATGATGAGGAGGATGATCTGGTATGAACCATTAAGTATTTCAATTGTTGTTCTTAGACAGGAAGCTTAGCTTGAAGCTGTTCTCAATTATCTGTTTCGCATCAATGGTTACATTTTCAGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGTGAGAAGTTGAAGTTTCCTGGTAATAATCATACTAAATTATGCCAAGAAGTTCAATGTATGAATTTTCTAATTGCATTTTCGTTCTTTGTTCTGTGAATAGATATCCTTTTGATGGTGATTTTCTCTCTTAGTCTAAAGGCTTGGGTTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGACCTTGGACCTTTATATGTAAGTAACAATGTTCTGTTAGTTACTAGATTTTGAATTTTGGCGCCATTATTTTCGGTAGTTGACATTTTATGGCAACCTTAGGAGCTGTTGCTTAAAAAGTTCTGCAAATCAGTTTTCCAAAAATATTTTTAGTTTGTAACATAATTAACAAGTGTCTTAGAATATGGTTTAACTGTGTTTGATCATTGTTATCCAATTGTGTTGTCTGAAAAAACCAATTTCAATTGTTCTTAAAAAAATCAACACATTTTGCAGATAATAAAGCAAGAGAAAACAATTTTTAGCACACAATTACTTCAAAATGTTATCAAATTAGAGTATTGATGCGGAAAATTACTGTTTTTAAATTTGACTTTCGTAAATCCTCTCATTTTTTTGAGTAGTGTCTTCTCTCAGCAAGTGACAAAATTTCTATTCTCCCTATACTTTTTTGAAACTGAAGTACCTTATTCTAGTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTGCTATGTTTGAGTAATTTTTGCAGATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGGTAAGTAGTATTTGAGAGAAACTCTCATCCCATTCATGTCCAGCTGATTTGTAGCAGGACTTTTGTATGCTTTAGATAAACTAAGTCAAGGCATGATTGTGTGTTTATACATTCTCCTATCTCATGGCTTGTCCAGTTGTTTGTTCTTAAATGTGTTAGGTTCCTACATATTTGTGGAAAAGGAAAAGTATGGGGTTAAAGGGTAATAATAAGAATGGGTGACAATGCAAATTGATTAGTAGGGGTGGGAATCAGAAAGAATAAGAACCTAGGAAGCTTGTGAGAACTAAGCATAATGAAATACTTATAGCTAGGGGGGGTCAAAAGAGAAGATGTTATTCTTTAGGCGGTGCTGGGAACTCTCAATTTCTCCCTCTTATTCGTGCAACTTTCCAATAGTTTTCAATTACTAAGTAGTGGTACTGGAACAATCGGGTCCTAGGACTTGATGGTTGCAAATAGGAAAAGAGAGGATTGCTTGGAAGCAATTTAGGAGAAGTTACTATAATGTTTAAATAGACTTGTCGGTAATGCATTGTCAGGAAATGCACAAGGAGATGAGCCATTTGATGGAGTACTATATGGAAAATATAATGAATGCTGAGTGTGGGGCTAATCTTGTGCCAACCTCAGAAAATAAGGATAAGGTTCCAATCATACAAGCAAAGTATGTTATATAAGTGGTAGATTAAGGAAGGGGGAAGGCTTCGATAGGATCATCATCTAGTAGACCAAGGGGGAAGGGCATCATAGAGAACTAATGAGGATCCAAATTTGAGATTTGAAATGGAATTTTCTGGTGACCCGCTGTGGCCTAATATCCTTAGCTGAGTGATACTTGAACGATCATAAATTGATTGAGGAGAAGTTTGTGGTAGCAACACTTGAATGTTAATAAATTAGTTGAGGAGAAGCTTGAGCGGGCAGCAATGTATATGAAAGGAGAGGCATTGAAATGGTTTTAGCAGGAGGAAAGATGCAAGTCTTTCAAAAATTGGATTGGGTAGCAAGGAAAAAGATAGTTGCTAAGGCTACTTTTGCAATTGCAAGAGGAATCACACTCAAGAGATTTCAAGCTGTGTAATAAGAGACTACCATGAGGGAGTATGAAAGGCATTTCAGCATCATTGATTGGCATAAATGATGGGTTCTGGATGGTGAAGTAAGAATTATTCCGTAGGCACTTGTGTCAACTGCCAGTGATGCTCATCTATGATCAAGAACCTGGCATAGAGGAAGAATAATATCTAACAGAGGAGGATATGGTGGTACATACAGAATATCTAATAGCTGAAATGGTGCCATAGATACAATAAAAAAGAGATTCGTTAAAAAATGGAGTGGAGTAGAGAGGTGAGTTGTGATGGAATTGTTGATGGGGTTGTCTTTGATTTCAATGATGGGCTTTGATATATACGTACATATATATTAGTTCAACAATGGTGGAGCGGAGATTCGAATCTATGATGGTAAAAGATATACTTAACTAGTTGAGCTAAGTTCAGATTGGATGGGTTTGATATATTTTTTAGTATGATGAAGAACTAAGGGATAGATACGAGGAGAGGTGAGATATAGTATTTTAATCTGTTGAATTATGCTCACGTTGGTTGGACTTCGATATATTTTCTAGGACGATAGAGATCGAGGGATAACTATGAGCAAAGGTGATTGATATAATATATTAACCAGTTGAGTTATACTCAGGTTGGTTGGTTGGGTTTGATATATTTTCTAGGATGTTGAAGATCAAGGGACGGATATAAGGATAGGTGATAGCGTTAATTGTCTGTGGTGAGACACAATTTTATTTCAAAGAAATTGTAGAAGCCTTAGCATTGCCAACGACCAAAACTTCAAGTTATGGAGTAGTAATGAATGGACAGAATATTTGTTCAAGGGGGTAATACAAATGTGTGAACAAGAGGAGCTGATGCTTTCAGATTCAGGACTGGGGGTTTTCTTGAGGGTCATTAACGATAAGTTAAGGACTATGACACAAGTCTTTGACAAAAGCAGATAGATGTGGAAATTGATAAATAATGTATCAAGGAGAAGTTGTGACAAGGTACCTCTTCCATTTCAGGTACTTGATGCACCATGCTTCATTATGTCACAATAATAATTGCACGAGCTCAAGCTGAGAATGTAGCCAATATTTTCTTTCGTGGAGTTGCTTGTTTACGTGGGATTCCTGGAAGTACTGTCCCCGATCATGATCGTAGTTAGACTAGTAATGTTTTTTTAGAACTATTTAAATGGCAAGGCATGTTCTCCTTGTCATCCAATTTGAGGTGATTAGTTGAGGACAAGGATCGTAATTTGCTCTAGCAAAACCCGAACAATAAGCTTGTTCGCAACTTGTGTAGATAGTCCTTCAGTTGCGTAGTTTAACATTTGTGATGGGTCTGTGTAAGCGGACCACATAAGTACTGATTCAATGGAAAGGGATGTGTGCTGATAATGTCACATGGGATCCAGCCATCACATAATATCCATCTGTAACCTCTCTTTGCCTCGAGGGCAGCGTTGCTATTTGAGGCCGGGGGTACTGGACGGCCCCTGACCCAACCAAAATGCAATGGAAGGAGATGGAAGAGGATTGGGCAATGTGTTTGTAAACTGATTAGAGGCTGGATGTAACAATCCAAGCCTACTGCTAGCAGATATTGTCTGCTTTGGCCCGTTACGTATTACCATCAGCCTCACTGCTTTAAAACGCGTCTACTAGGGAGAAGTTTCCACACCTTTATAAAAAATGTTTTGTTTTCCTCTCCACCTGATGTGAGATCTCACATAGGAATTAATAGAGGAGGTTCATTAGGAACACCAACATGTAAATACGTATAGCAAGACGGTAACAGAAAGAGTGATTAACGGGATACTGTAGCAATTGAAAGTTCTTGAATTCTCCCTAACATAAGAATAACGTCCAAATAGTTTTGATCAACATTTCCACGTCAGGTCTATTAAAAAGGTTGTGTGAATGCAATCTCTTTCAGCCTCTATATGGGCTCATTAATTACAGGTTATATGTGCATGGTAGCTTGCATGATGACACTGTTATATTGCGAATATTATTCTGCGCTCTAAATGTCGAATTTTTGCAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTCGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTCGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAACACTCCTGTTCTGTTCACTTACGTGTATAAAAGTTCCATCTTCAGTAAAATGATTGATTGGCATTTGTTGTGTTTGATTAAAGACCAACAACACATTTAGAAGGGAAAACCATAATNAA

mRNA sequence

CATTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTTGGTGAAATATAAAGAAAAACATTTCAGCTGGATCCGGTTTGAAGGGATTGCAGACTCTGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTGGAAGGCGTAGCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGCACCCAATTCGAGCGTCAGCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGCGACTTGCGGAAGCTGGTCGCGGAGCGCAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGATGACTCTAAAAATGACGATGATGTCTTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAACCAAGGCCCCCAGCCGAACATCTTCGTGATGATTCTGATGATGAGGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGTGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTTAGTCTAAAGGCTTGGGTTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGACCTTGGACCTTTATATATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTCGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTCGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAACACTCCTGTTCTGTTCACTTACGTGTATAAAAGTTCCATCTTCAGTAAAATGATTGATTGGCATTTGTTGTGTTTGATTAAAGACCAACAACACATTTAGAAGGGAAAACCATAATNAA

Coding sequence (CDS)

ATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGCACCCAATTCGAGCGTCAGCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGCGACTTGCGGAAGCTGGTCGCGGAGCGCAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGATGACTCTAAAAATGACGATGATGTCTTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAACCAAGGCCCCCAGCCGAACATCTTCGTGATGATTCTGATGATGAGGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGTGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTTAGTCTAAAGGCTTGGGTTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGACCTTGGACCTTTATATATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTCGGCTGGGTCAGTTCTGA

Protein sequence

MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDDEEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Homology
[Close]
BLAST of Cp4.1LG00g02710 vs. TrEMBL
Match: A0A0A0L1Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011840 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 5.3e-113
Identity = 204/240 (85.00%), Postives = 223/240 (92.92%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNR+I+G  +SS+S   PP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120
           LVAE ++LPIGNLKLILRGKILDD KN+DDV+VRLNHGDSLTVAVKP+PPAEHLRD+ D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKK+Y FLREKLKFPDILLMV+FSLSLK W AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]
BLAST of Cp4.1LG00g02710 vs. TrEMBL
Match: B9N2Q0_POPTR (Ubiquitin family protein OS=Populus trichocarpa GN=POPTR_0003s08770g PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.1e-81
Identity = 150/211 (71.09%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 30  NTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDSKNDD 89
           N  EIT++TIGP+ PSRLL+PSPIKV DLRKLVAE   LPI NL+LILRG +L DS+++D
Sbjct: 22  NMAEITVKTIGPSPPSRLLLPSPIKVRDLRKLVAENRHLPIENLRLILRGNVLHDSRDED 81

Query: 90  DVFVRLNHGDSLTVAVKPRPPAEHLRDDSDDEEDDLKFRLPESSSRLKKKIYNFLREKLK 149
           D+  RLN+GDSL VAVKP+PPA+HLRD  DD++DDLKF+LP+S+SR K+++Y FL +KLK
Sbjct: 82  DI--RLNNGDSLIVAVKPKPPAKHLRDGFDDDDDDLKFQLPQSASRWKRRLYFFLHDKLK 141

Query: 150 FPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEM 209
            PDILLM +FSLSLKAW   ++WFI+APVAH WDLGP+YI+GTGF IILLNLG R++G++
Sbjct: 142 LPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQAGDL 201

Query: 210 SAYSIFNEGFRELPGTLNADRLDRDVRLGQF 241
           SAYSIFNE FRELPGTLNADRLDRD+R GQF
Sbjct: 202 SAYSIFNEDFRELPGTLNADRLDRDIRAGQF 230

[Close]
BLAST of Cp4.1LG00g02710 vs. TrEMBL
Match: A0A067K112_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19318 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 9.1e-81
Identity = 153/239 (64.02%), Postives = 196/239 (82.01%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  + N++ SG+ +S +   +  +N +EIT++TIGP+ PSRLLVPS IKV DLRK
Sbjct: 1   MAEIVE-EDINQSTSGSTSSEIDKYDDKKNLVEITLKTIGPSPPSRLLVPSRIKVHDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120
           L++E + LPI  L+LILRGK+L DS+++DD+ ++L + DSL VAVKP PPA+HLRD  DD
Sbjct: 61  LISENNHLPIEKLRLILRGKVLHDSRDEDDIQIQLKNSDSLIVAVKPNPPAKHLRDGFDD 120

Query: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           + DDLKF+LP+S+SR K+++Y FL +KLK P ILLM +FSLSLK W+ I++WFI+APVAH
Sbjct: 121 D-DDLKFQLPQSTSRWKRRLYFFLHDKLKLPGILLMALFSLSLKVWILIILWFILAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
            WDLGPLYILGTGF II  NLG R++G++SAYSIFNE FRELPGTLNADRLDRD+R GQ
Sbjct: 181 RWDLGPLYILGTGFSIIFFNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 237

[Close]
BLAST of Cp4.1LG00g02710 vs. TrEMBL
Match: B9S1H9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0865190 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 145/214 (67.76%), Postives = 180/214 (84.11%), Query Frame = 1 

Query: 26  NPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDS 85
           N  +N +EIT++TIGP+  SRLLVPSPIKV DLRKL+AE   LPI NL+LILRG +L DS
Sbjct: 16  NNKQNLVEITLKTIGPSPSSRLLVPSPIKVRDLRKLIAEDHHLPIQNLRLILRGNVLQDS 75

Query: 86  KNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDDEEDDLKFRLPESSSRLKKKIYNFLR 145
           K+DDD +++L++ DSL VAVKP+PPA+HL D  D ++DDLKF+LP+S+SR K++IY+FL 
Sbjct: 76  KHDDDAYIKLSNSDSLIVAVKPKPPAKHLHDGFDFDDDDLKFQLPQSTSRWKRRIYSFLH 135

Query: 146 EKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRR 205
           +KLK  DILLM +FSLSLKAW  I++WF +APVAH WDLGPLY+LGTGF II  NLG R+
Sbjct: 136 DKLKISDILLMALFSLSLKAWAVIVLWFGLAPVAHRWDLGPLYMLGTGFSIIFFNLGRRQ 195

Query: 206 SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           +G++SAYSIFNE FRELPGTLNADRLDRD+R GQ
Sbjct: 196 AGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 229

[Close]
BLAST of Cp4.1LG00g02710 vs. TrEMBL
Match: A0A059CIA7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02180 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 150/215 (69.77%), Postives = 178/215 (82.79%), Query Frame = 1 

Query: 27  PPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDSK 86
           P    + I +RTIGPARPSRL VPSP+KV DLRKL+AE+S LPIG+L+LILRGK+LDD+K
Sbjct: 9   PERKEVVIVLRTIGPARPSRLPVPSPVKVHDLRKLIAEKSHLPIGDLRLILRGKVLDDTK 68

Query: 87  NDDDVFVRLNHGDSLTVAVKPRPPAEHLRD--DSDDEEDDLKFRLPESSSRLKKKIYNFL 146
           + DD+ V L  GDSL  AVKP+ P +   D  D+DD+EDDLKF LP+SSS  K+K++N L
Sbjct: 69  DGDDMCVELIDGDSLIAAVKPKSPVKRSHDGVDTDDDEDDLKFHLPQSSSWWKRKMFNLL 128

Query: 147 REKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHR 206
            +KLK PDILLM IFSLSLK WV I++WFI+APVA+ WDLGPLYIL TGF IILLNLG R
Sbjct: 129 HDKLKLPDILLMAIFSLSLKTWVLIILWFILAPVAYRWDLGPLYILATGFMIILLNLGQR 188

Query: 207 RSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           +SG++SAYSIFNEGFRELPGTLNADRLDRD+R GQ
Sbjct: 189 QSGDLSAYSIFNEGFRELPGTLNADRLDRDIRTGQ 223

[Close]
BLAST of Cp4.1LG00g02710 vs. TAIR10
Match: AT2G35360.1 (AT2G35360.1 ubiquitin family protein)

HSP 1 Score: 266.2 bits (679), Expect = 2.0e-71
Identity = 130/209 (62.20%), Postives = 164/209 (78.47%), Query Frame = 1 

Query: 31  TIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDSKNDDD 90
           T+EIT +TIGPARPS++ V S IK+ DLR  +AE+ + P+  L++ILRGK L D ++ DD
Sbjct: 17  TVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGKFPVSTLRMILRGKALQDEEDGDD 76

Query: 91  VFVRLNHGDSLTVAVKPRPPAEHLRDDSDDEEDDLKFRLPESSSRLKKKIYNFLREKLKF 150
           ++V L   DS  VAV P PPA  +    DD++DDLKF+LP S+SR K+K+Y FLR KLK 
Sbjct: 77  LYVTLKDQDSFIVAVIPNPPA-GVESFDDDDDDDLKFKLPPSASRWKRKLYYFLRNKLKL 136

Query: 151 PDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEMS 210
           PDI+LM +FSLSLK WV I +WFI+AP+AH WDLGP++ILGTGF IILLNLG R+ G++S
Sbjct: 137 PDIILMGLFSLSLKMWVIITLWFILAPIAHRWDLGPIFILGTGFSIILLNLGKRQPGDVS 196

Query: 211 AYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
           AYSIFNE FRELPGT NADR+DRD+R GQ
Sbjct: 197 AYSIFNEDFRELPGTYNADRIDRDIRAGQ 224

[Close]
BLAST of Cp4.1LG00g02710 vs. NCBI nr
Match: gi|449461997|ref|XP_004148728.1| (PREDICTED: uncharacterized protein LOC101223066 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 7.6e-113
Identity = 204/240 (85.00%), Postives = 223/240 (92.92%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNR+I+G  +SS+S   PP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120
           LVAE ++LPIGNLKLILRGKILDD KN+DDV+VRLNHGDSLTVAVKP+PPAEHLRD+ D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKK+Y FLREKLKFPDILLMV+FSLSLK W AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]
BLAST of Cp4.1LG00g02710 vs. NCBI nr
Match: gi|659095689|ref|XP_008448715.1| (PREDICTED: uncharacterized protein LOC103490803 [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 6.0e-110
Identity = 202/240 (84.17%), Postives = 218/240 (90.83%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNIS          NPP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRNISNR--------NPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120
           LVAE S+LPIGNLKLILRGKILDD KN+DDV+VRLNHGDSLTVAVKP+PPAEHLRD+ D+
Sbjct: 61  LVAESSRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKK+Y FLREKLKFPDILL+V+FSLSLK W AIL+WFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLVVVFSLSLKGWAAILLWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 240
           SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 232

[Close]
BLAST of Cp4.1LG00g02710 vs. NCBI nr
Match: gi|566161650|ref|XP_006385626.1| (ubiquitin family protein [Populus trichocarpa])

HSP 1 Score: 309.7 bits (792), Expect = 4.5e-81
Identity = 150/211 (71.09%), Postives = 183/211 (86.73%), Query Frame = 1 

Query: 30  NTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDSKNDD 89
           N  EIT++TIGP+ PSRLL+PSPIKV DLRKLVAE   LPI NL+LILRG +L DS+++D
Sbjct: 22  NMAEITVKTIGPSPPSRLLLPSPIKVRDLRKLVAENRHLPIENLRLILRGNVLHDSRDED 81

Query: 90  DVFVRLNHGDSLTVAVKPRPPAEHLRDDSDDEEDDLKFRLPESSSRLKKKIYNFLREKLK 149
           D+  RLN+GDSL VAVKP+PPA+HLRD  DD++DDLKF+LP+S+SR K+++Y FL +KLK
Sbjct: 82  DI--RLNNGDSLIVAVKPKPPAKHLRDGFDDDDDDLKFQLPQSASRWKRRLYFFLHDKLK 141

Query: 150 FPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGEM 209
            PDILLM +FSLSLKAW   ++WFI+APVAH WDLGP+YI+GTGF IILLNLG R++G++
Sbjct: 142 LPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQAGDL 201

Query: 210 SAYSIFNEGFRELPGTLNADRLDRDVRLGQF 241
           SAYSIFNE FRELPGTLNADRLDRD+R GQF
Sbjct: 202 SAYSIFNEDFRELPGTLNADRLDRDIRAGQF 230

[Close]
BLAST of Cp4.1LG00g02710 vs. NCBI nr
Match: gi|743848373|ref|XP_011028216.1| (PREDICTED: uncharacterized protein LOC105128309 isoform X1 [Populus euphratica])

HSP 1 Score: 308.9 bits (790), Expect = 7.7e-81
Identity = 150/212 (70.75%), Postives = 184/212 (86.79%), Query Frame = 1 

Query: 30  NTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDSKNDD 89
           N  EIT++TIGP+ PSRLL+PSPIKVCDLRKLVAE   LPI NL+LILRG +L DS+++D
Sbjct: 22  NMAEITVKTIGPSPPSRLLLPSPIKVCDLRKLVAENRHLPIENLRLILRGNVLHDSRDED 81

Query: 90  DVFVRLNHGDSLTVAVKPRPPAEHLRDD-SDDEEDDLKFRLPESSSRLKKKIYNFLREKL 149
           D++  LN+GDSL VAVKP+PPA+HLRD   DD++DDLKF+LP+S+SR K+++Y FL +KL
Sbjct: 82  DIW--LNNGDSLIVAVKPKPPAKHLRDGFDDDDDDDLKFQLPQSASRWKRRLYFFLHDKL 141

Query: 150 KFPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRRSGE 209
           K PDILLM +FSLSLKAW   ++WFI+APVAH WDLGP+YI+GTGF IILLNLG R++G+
Sbjct: 142 KLPDILLMGLFSLSLKAWAVFILWFILAPVAHRWDLGPIYIIGTGFVIILLNLGRRQAGD 201

Query: 210 MSAYSIFNEGFRELPGTLNADRLDRDVRLGQF 241
           +SAYSIFNE FRELPGTLNADRLDRD+R GQF
Sbjct: 202 LSAYSIFNEDFRELPGTLNADRLDRDIRAGQF 231

[Close]
BLAST of Cp4.1LG00g02710 vs. NCBI nr
Match: gi|802673341|ref|XP_012081589.1| (PREDICTED: uncharacterized protein LOC105641613 [Jatropha curcas])

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-80
Identity = 153/239 (64.02%), Postives = 196/239 (82.01%), Query Frame = 1 

Query: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  + N++ SG+ +S +   +  +N +EIT++TIGP+ PSRLLVPS IKV DLRK
Sbjct: 1   MAEIVE-EDINQSTSGSTSSEIDKYDDKKNLVEITLKTIGPSPPSRLLVPSRIKVHDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120
           L++E + LPI  L+LILRGK+L DS+++DD+ ++L + DSL VAVKP PPA+HLRD  DD
Sbjct: 61  LISENNHLPIEKLRLILRGKVLHDSRDEDDIQIQLKNSDSLIVAVKPNPPAKHLRDGFDD 120

Query: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           + DDLKF+LP+S+SR K+++Y FL +KLK P ILLM +FSLSLK W+ I++WFI+APVAH
Sbjct: 121 D-DDLKFQLPQSTSRWKRRLYFFLHDKLKLPGILLMALFSLSLKVWILIILWFILAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 240
            WDLGPLYILGTGF II  NLG R++G++SAYSIFNE FRELPGTLNADRLDRD+R GQ
Sbjct: 181 RWDLGPLYILGTGFSIIFFNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAGQ 237

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g02710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG00g02710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1Y1_CUCSA5.3e-11385.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011840 PE=4 SV=1[more]
B9N2Q0_POPTR3.1e-8171.09Ubiquitin family protein OS=Populus trichocarpa GN=POPTR_0003s08770g PE=4 SV=1[more]
A0A067K112_JATCU9.1e-8164.02Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19318 PE=4 SV=1[more]
B9S1H9_RICCO1.5e-7867.76Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0865190 PE=4 SV=1[more]
A0A059CIA7_EUCGR1.5e-7869.77Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02180 PE=4 SV=1[more]
BLAST of Cp4.1LG00g02710 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35360.12.0e-7162.20 ubiquitin family protein[more]
BLAST of Cp4.1LG00g02710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461997|ref|XP_004148728.1|7.6e-11385.00PREDICTED: uncharacterized protein LOC101223066 [Cucumis sativus][more]
gi|659095689|ref|XP_008448715.1|6.0e-11084.17PREDICTED: uncharacterized protein LOC103490803 [Cucumis melo][more]
gi|566161650|ref|XP_006385626.1|4.5e-8171.09ubiquitin family protein [Populus trichocarpa][more]
gi|743848373|ref|XP_011028216.1|7.7e-8170.75PREDICTED: uncharacterized protein LOC105128309 isoform X1 [Populus euphratica][more]
gi|802673341|ref|XP_012081589.1|1.3e-8064.02PREDICTED: uncharacterized protein LOC105641613 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR019387Uncharacterised_SAYSvFN
IPR000626Ubiquitin_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g02710.1Cp4.1LG00g02710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 32..86
score: 11
IPR019387Uncharacterised domain SAYSvFNPFAMPF10260SAYSvFNcoord: 169..234
score: 7.4
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 22..110
score: 3.
NoneNo IPR availablePANTHERPTHR13527UNCHARACTERIZEDcoord: 18..240
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g02710CmaCh06G008450Cucurbita maxima (Rimu)cmacpeB803
Cp4.1LG00g02710CmoCh06G008700Cucurbita moschata (Rifu)cmocpeB756
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g02710Cucumber (Chinese Long) v3cpecucB0008
Cp4.1LG00g02710Bottle gourd (USVL1VR-Ls)cpelsiB006