CmoCh06G002890 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G002890
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionFar-red elongated hypocotyl protein, putative
LocationCmo_Chr06 : 1439861 .. 1443552 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGGTTTGGCATCTGGGTTTTTAAAGATTCTTGCTCTAATCGACTCATTTATCAGTTTTCGAATCTGTTTCTTGTACTGTTTGATGTCTGTTTAATGTCGGTCTAGTGCTAAAACGGTGGATGTGAATCGAGATGGGGTTTTTGATTCATTTCTGTTGCTTAATCTTTTTAGCGTCTGATCATTGGATTTCACTTATTCCCCGTTCTAGAACTTCCCTCAACCCTATATTCATTAAGTAATTTTGTGAGAGATTGAAGCATTTTCTCTTGTAGTTCCTGTCTTGCATCTTTTATCCTGTCTCTTGTCTGATGAATTATGTTGTTTTTTGTTAAACTTTTGCAGTTTCTATGAGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGATGGCCTACCCGAAACAGAGCTTATGACTGTACAATTCTCAAAGGGTAATCCAAATGTAATTTGTATCGACGAGGGGTTGACGCCTGAATCGGTAAAAGACAGCAATAGCTTCAGCGACGAGTCCAATTCTGCGACGTCCGTGTTCTGTGGAGCAAAATTGGAACTGAACCAGGCTTTATCTTGCACACGTGATAGTTCTGAAAGCACCCATTTCTGTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACCAAATGGAAGCAATTCACAAAATTCAGGAGCATATGCTAGTATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGCAGGAACTTGAGGATCTTTTCCGTTCGAATGGGTTGAACCCGAATACATATGTTCTTTCGTCTGGTAGATGGACAGTAAACCACGGTAATAAACACATGATCCATAAGAATTTTGATCCGTTCCATGTGCATTCATATTTATCCATTTACTAAATCACACTCTTCTCTTGATTCAGAAGCTCAATCAAGAGATAGAACACCGACGATCGATCGAGAATTCGAGCAGTTCTTTTCTATGTTGATGCTATAATCGTGAATGCTCGTTTGACTACGAGGTAACAATATGTATATAGTTCAAATGCCATAGTCTTTATGAATTATATGGATATCAATTCCATGTTGTTGCTGTAACTCTGAAGTTTACAGAAACAACAAAATGAAGAATCGAAGCGAGAAAAGAGGAGAGATTCATGAAGAGTTTATACAACAACAGGTTTTATTTGTTCTACAGAAAACAGAGTAAAGGAAGCCCACTCTGTTTCCTTAAAACAGAGCACACACGACGAAGAGGGATAAAGAAAGGAATCTGGGGATGTTTTAAGTTTACAAAGATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTGATTTAAAAATGGAACATTTTGGATGGTGAAAGACAAGTTGTTCCCTCACCTGGGTTATCGGCGAAGAAACGGAAAGCCAACCAGCCGCCGGAGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACAATAAAGAAATTATATCCATGAAGATGGAGTGGATGACTCTCCGCCCCCAAAATACTCGTCCCCTGCAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAAGGAAAAACCGGCTTGGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGAGCAAAAGAGACATTATTAACAGAGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGCGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTGGCAAGAGACCGGAATTTTCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGCCGGAGTTTGGGTGGTGGGTGGGTCGCCGTACTGGAGGATTCCGACGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGCCGTTGGTGAAATTGGGATTTGTTTTAAGAAGAACATTGGAGGTTTGGCCGGGAGTGAGTAATATCACGTCGGTTTGAAAGGGCTTGACGTAAACGGCGTCGGCTTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATCAACCGGAGTAGGTACGTTTTTCCAGGCTTCACTTTTAGCTTAAATGTATCTGAAAATCAAAATATAATCATTTTTAGTGTTAATTAAACAAGATTAATAGAGAGATTAAAGTGATTACCATTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCGGAAACATTCGGCGCTGCTCCGGTCTGAAGCGCCTGCTGAATCACACTCTCCGGCCTCACATTGAACCACTCACCCAAAATGATTGGGACTTCTCTGTGGGGCTTCTCGAACGGATATGACTCATTCCGGCGAGGGAGGATGATAATGGCGCCGTGAACTGTGGCTCTCAGCCACGAGATATGGCCGTGCCAAAGCAGAGTCCCTCTTTGGCCGTTGAGTGAAAAATTATAGGTGTAAGCTTGGCCGGTCTGGATCGGACATTGGGTCACATAAGCCGGTCCGTCGGCCCAACCGGTTCGGATCTGCCGGACGCCGTGCCAGTGGATGGTGACGTTCTCAGCCACGTGGTTGATGACCTTGATCAAGACTCTGTCGCCTTCTCTGGCCACCACTGGCGGCCCGGGGAGCTGCCGGTTGACGGTTAGAAGGTTCACCGTATGGCACAGCCTCGTCACGTTCTGGTACCCTATCTGTAAAACCCGCCGCCAGTCATTATTCCACGCTGTTCCGGTGACCTTTTTTTAAATTTTTTTATTTTAAATTTAAAAATAAATAAATAAAAAGAAAAGAAAAACGGCCATACATTGAAAGTGTAGTGTCTGGTTACCCCGAACGCAAGCTCCGGCAAGAAACACGACAGAAGTGAGAGAAAAACAGTCAGTGCCGCCATTGATGAAGGCTCTGAAAGGCGGAAGGCGGCCATGGAAATTCAGTACCTGTGGAAGAAGATGAATAAATGGGGGTTAATAAATAGAGAAAATTTGATTTTTATTTTTAATTTTATAATTTCACACAGTTTAATTTGAACAACCATGATTATGATTTATATTTCTTTAAAATTAAGGAATTTCTTGTTGAATTGTTTCATTTCATCACACTGTTCTTCTTTTTGTCCCTTGTTCTTTTGTAGTTATACATTTAAGTTTAAGTCAAGTTAATTATAGAATATATTTCAT

mRNA sequence

ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGTTTCTATGAGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGATGGCCTACCCGAAACAGAGCTTATGACTGTACAATTCTCAAAGGGTAATCCAAATGTAATTTGTATCGACGAGGGGTTGACGCCTGAATCGGTAAAAGACAGCAATAGCTTCAGCGACGAGTCCAATTCTGCGACGTCCGTGTTCTGTGGAGCAAAATTGGAACTGAACCAGGCTTTATCTTGCACACGTGATAGTTCTGAAAGCACCCATTTCTGTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACCAAATGGAAGCAATTCACAAAATTCAGGAGCATATGCTAGTATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGCAGGAACTTGAGGATCTTTTCCGTTCGAATGGGTTGAACCCGAATACATATGTTCTTTCGTCTGGTAGATGGACAGTAAACCACGAAGCTCAATCAAGAGATAGAACACCGACGATCGATCGAGAATTCGAGCAGTTCTTTTCTATGTTGATGCTATAATCGTGAATGCTCGTTTGACTACGAGTTTACAGAAACAACAAAATGAAGAATCGAAGCGAGAAAAGAGGAGAGATTCATGAAGAGTTTATACAACAACAGGTTTTATTTGTTCTACAGAAAACAGAGTAAAGGAAGCCCACTCTGTTTCCTTAAAACAGAGCACACACGACGAAGAGGGATAAAGAAAGGAATCTGGGGATGTTTTAAGTTTACAAAGATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTGATTTAAAAATGGAACATTTTGGATGGTGAAAGACAAGTTGTTCCCTCACCTGGGTTATCGGCGAAGAAACGGAAAGCCAACCAGCCGCCGGAGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACAATAAAGAAATTATATCCATGAAGATGGAGTGGATGACTCTCCGCCCCCAAAATACTCGTCCCCTGCAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAAGGAAAAACCGGCTTGGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGAGCAAAAGAGACATTATTAACAGAGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGCGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTGGCAAGAGACCGGAATTTTCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGCCGGAGTTTGGGTGGTGGGTGGGTCGCCGTACTGGAGGATTCCGACGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGCCGTTGGTGAAATTGGGATTTGTTTTAAGAAGAACATTGGAGGTTTGGCCGGGAGTGAGTAATATCACGTCGGTTTGAAAGGGCTTGACGTAAACGGCGTCGGCTTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATCAACCGGAGTAGGTACGTTTTTCCAGGCTTCACTTTTAGCTTAAATGTATCTGAAAATCAAAATATAATCATTTTTAGTGTTAATTAAACAAGATTAATAGAGAGATTAAAGTGATTACCATTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCGGAAACATTCGGCGCTGCTCCGGTCTGAAGCGCCTGCTGAATCACACTCTCCGGCCTCACATTGAACCACTCACCCAAAATGATTGGGACTTCTCTGTGGGGCTTCTCGAACGGATATGACTCATTCCGGCGAGGGAGGATGATAATGGCGCCGTGAACTGTGGCTCTCAGCCACGAGATATGGCCGTGCCAAAGCAGAGTCCCTCTTTGGCCGTTGAGTGAAAAATTATAGGTGTAAGCTTGGCCGGTCTGGATCGGACATTGGGTCACATAAGCCGGTCCGTCGGCCCAACCGGTTCGGATCTGCCGGACGCCGTGCCAGTGGATGGTGACGTTCTCAGCCACGTGGTTGATGACCTTGATCAAGACTCTGTCGCCTTCTCTGGCCACCACTGGCGGCCCGGGGAGCTGCCGGTTGACGGTTAGAAGGTTCACCGTATGGCACAGCCTCGTCACGTTCTGGTACCCTATCTGTAAAACCCGCCGCCAGTCATTATTCCACGCTGTTCCGGTGACCTTTTTTTAAATTTTTTTATTTTAAATTTAAAAATAAATAAATAAAAAGAAAAGAAAAACGGCCATACATTGAAAGTGTAGTGTCTGGTTACCCCGAACGCAAGCTCCGGCAAGAAACACGACAGAAGTGAGAGAAAAACAGTCAGTGCCGCCATTGATGAAGGCTCTGAAAGGCGGAAGGCGGCCATGGAAATTCAGTACCTGTGGAAGAAGATGAATAAATGGGGGTTAATAAATAGAGAAAATTTGATTTTTATTTTTAATTTTATAATTTCACACAGTTTAATTTGAACAACCATGATTATGATTTATATTTCTTTAAAATTAAGGAATTTCTTGTTGAATTGTTTCATTTCATCACACTGTTCTTCTTTTTGTCCCTTGTTCTTTTGTAGTTATACATTTAAGTTTAAGTCAAGTTAATTATAGAATATATTTCAT

Coding sequence (CDS)

ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGTTTCTATGAGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGATGGCCTACCCGAAACAGAGCTTATGACTGTACAATTCTCAAAGGGTAATCCAAATGTAATTTGTATCGACGAGGGGTTGACGCCTGAATCGGTAAAAGACAGCAATAGCTTCAGCGACGAGTCCAATTCTGCGACGTCCGTGTTCTGTGGAGCAAAATTGGAACTGAACCAGGCTTTATCTTGCACACGTGATAGTTCTGAAAGCACCCATTTCTGTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACCAAATGGAAGCAATTCACAAAATTCAGGAGCATATGCTAGTATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGCAGGAACTTGAGGATCTTTTCCGTTCGAATGGGTTGAACCCGAATACATATGTTCTTTCGTCTGGTAGATGGACAGTAAACCACGAAGCTCAATCAAGAGATAGAACACCGACGATCGATCGAGAATTCGAGCAGTTCTTTTCTATGTTGATGCTATAA
BLAST of CmoCh06G002890 vs. Swiss-Prot
Match: FHY1_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana GN=FHY1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.7e-09
Identity = 68/235 (28.94%), Postives = 99/235 (42.13%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEI---SKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPETE 60
           ++     P+EINSF+ +   S K  L  E + + S K K   + S            E  
Sbjct: 6   VDNNNEKPSEINSFHHMIISSSKNVLKMEEVEV-SKKRKFQTDQSD-----------ELS 65

Query: 61  LMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQALSCTRDSS 120
           L+ +       NV C +       +    S S   NS TS+ C   +E+ +  S      
Sbjct: 66  LLPLSKHTCFANVACSENTNGNSEIDTEYSMSSYVNSTTSMECNNDIEMKEESS------ 125

Query: 121 ESTHFCVGSSTAMESSSTEQEVAFARGENQMEAI-HKIQEHMLVLDSHEEHVNDDLEQCT 180
                  GS    +  S E  + +  G   +E    K+ E++L LD  EE   +D + C+
Sbjct: 126 -------GSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEE-EEDAKGCS 185

Query: 181 EQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRT--PTIDREFEQFFSMLML 230
                        N   +VLSSGRWTVN +  +   T  PTID+EFEQ+FS LML
Sbjct: 186 S------------NAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLML 202

BLAST of CmoCh06G002890 vs. TrEMBL
Match: A0A0A0LFJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734140 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.5e-82
Identity = 173/256 (67.58%), Postives = 191/256 (74.61%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEISK----------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           MEEKE NP EINSFY ISK          KRKLPAEHLGLPSPKHKH +E   SKS FL+
Sbjct: 92  MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLY 151

Query: 61  DGLPETELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQAL 120
            GLPETE M VQF K N NV+C DE   PESVKDSNS S+ES+SATSVF GAK ELNQA+
Sbjct: 152 GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 211

Query: 121 SCTRD------------SSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHM 180
           +CT D            SSES HF V SSTAMESSSTEQE AF  GEN+ME I K+QE +
Sbjct: 212 TCTHDTSTTRSMSFGGASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 271

Query: 181 LVLDSHE-----EHVNDDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRT 230
           L LDSHE     E+ NDD +QCT+QELE+LF SNGLNPNTY+LSSGRW +NHEAQSR R 
Sbjct: 272 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARA 331

BLAST of CmoCh06G002890 vs. TrEMBL
Match: B9HBT1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s08760g PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.2e-27
Identity = 92/261 (35.25%), Postives = 140/261 (53.64%), Query Frame = 1

Query: 1   MEEKEHNPTEINSF----------YEISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           M+E   +P+EINSF          + ++KKRKL  E +GLP  KHK  +   P ++  ++
Sbjct: 1   MDEDSGDPSEINSFQFKEAPNSKLFCLNKKRKLQDEQVGLPISKHKCWDHRLPLETSTIY 60

Query: 61  DGLPETELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQAL 120
           +   E + +     K N     IDEG  PES KDSNSF  +S+SA SV   AKLE+  + 
Sbjct: 61  EENQEEKDLITHIIKENAERRAIDEGSDPESAKDSNSFVGDSDSAMSVSGEAKLEMEVSK 120

Query: 121 SCTRDSSESTHFCVGSS----------TAMESSSTEQEVAFARGENQ-------MEAIHK 180
             + D   ++ +  G+S           A    + ++E+ F  G++        ++    
Sbjct: 121 IWSPDRPSTSSYNWGNSLKDTQYSPDNAAAPRHAGKEELVFVEGKDDHCCHYDGLQVYQN 180

Query: 181 IQEHMLVLDSH-----EEHVNDDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQ 230
           ++E +L ++S       E   D++E CT++E++D+  SN LN N YV SS  W VN +AQ
Sbjct: 181 LEEPILEIESPLNYSCSEFGTDNIEPCTDKEVDDILYSNELNLNGYVHSSEGWAVNQDAQ 240

BLAST of CmoCh06G002890 vs. TrEMBL
Match: D7THL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g00610 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 93/255 (36.47%), Postives = 132/255 (51.76%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFY----------EISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           M+E   NP+E++S +          ++ KKRKL AE L LP PKHK    +  S+ V+  
Sbjct: 1   MDETNKNPSELHSSHVCKELNTNIMDLKKKRKLQAELLDLPLPKHKCCGRSFSSQIVYPL 60

Query: 61  DGLPETELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQAL 120
           D   E E +  Q  K   N   ID+G  P+S KDSNS +  S+S  SV+  AK E     
Sbjct: 61  DEDTEIEDLHAQIVKEETNGETIDDGSEPDSAKDSNSLAGYSDSVISVYGEAKFEPECEK 120

Query: 121 SCTRDSSESTHFCVGS-----------STAMESSSTEQEVAFARGENQMEAIHKIQEHML 180
           +C  +   S+    G            ST M    ++ ++ F  GE+       ++E +L
Sbjct: 121 TCPYNYPYSSSVNWGGNSSRDDLYSLKSTRMTPDVSKDKMTFFSGEHNPLVSQNLEEQLL 180

Query: 181 VLDSH-----EEHVNDDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTP 230
              +       E+ +   E  T++EL D+  S+G+ PN YVLSSGRW+VN +AQ   R P
Sbjct: 181 EFGNDIDFMCSEYRDGMAEHSTDKELADMPYSSGMKPNNYVLSSGRWSVNQDAQIGTRKP 240

BLAST of CmoCh06G002890 vs. TrEMBL
Match: A0A0D2NDW2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G249600 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.0e-25
Identity = 96/245 (39.18%), Postives = 139/245 (56.73%), Query Frame = 1

Query: 6   HNPTEINSFYE-------ISKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPETEL 65
           +NP++I SF E       ++KKRKL AE LGLP  KH+   ++S  K       + + E 
Sbjct: 8   NNPSQIKSFLEKSINIVDLNKKRKLEAEQLGLPLSKHQCWKQSSSLKPPTF-GSITQVEG 67

Query: 66  MTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLEL-NQALSCTR--- 125
            +    +G    +C  + L   S KDSNSF+D+S++A SV   AK  L N+A S +    
Sbjct: 68  FSPCTFQGKTWAVC--DVLETGSAKDSNSFADDSDTAISVHVDAKYLLYNRASSSSSPNW 127

Query: 126 -DSSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHM---LV-----LDS-H 185
             SS+ +H      T + SSS E+EV  + G+    A  K+ E++   LV     +D  +
Sbjct: 128 GSSSQHSH---SDGTTVASSSVEKEVVSSPGDEPEPADAKLAENLDESLVEYGSDIDYIY 187

Query: 186 EEHVNDDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQFF 230
            ++ N   EQ  ++E+E++   +G NPN Y+LSSGRW+VN EAQ   R PTID+EFEQ+F
Sbjct: 188 SQYGNYTREQHQDKEIEEILNCDGANPNVYILSSGRWSVNQEAQQTKRKPTIDQEFEQYF 246

BLAST of CmoCh06G002890 vs. TrEMBL
Match: W9S766_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009441 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 76/172 (44.19%), Postives = 108/172 (62.79%), Query Frame = 1

Query: 70  VICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQA-------LSCTRDSSESTHF 129
           V+ +D G   ES+KDSNS++++SNS+TS++  AK+E   A       +SC  D SE+T  
Sbjct: 3   VLAMDGGSELESMKDSNSYTEDSNSSTSIYGEAKMEAEYATTPHYSLVSCGADISENTR- 62

Query: 130 CVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSHEEHVN-----DDLEQCTE 189
             G    M  ++  +EV       + +A   ++E +L   +HE ++      D+LEQ T+
Sbjct: 63  SQGDGLNMAKANCSEEV-------ESQAFLNLEEQLLEFGNHENYIASEYGADNLEQWTD 122

Query: 190 QELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQFFSMLML 230
           +ELED+  +NGLNPN YV+SSGR TVN E QS  R PTID+EFEQ+FSMLML
Sbjct: 123 KELEDILYANGLNPNEYVISSGRRTVNQEDQSGSRKPTIDQEFEQYFSMLML 166

BLAST of CmoCh06G002890 vs. TAIR10
Match: AT2G37678.1 (AT2G37678.1 far-red elongated hypocotyl 1)

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10
Identity = 68/235 (28.94%), Postives = 99/235 (42.13%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEI---SKKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPETE 60
           ++     P+EINSF+ +   S K  L  E + + S K K   + S            E  
Sbjct: 6   VDNNNEKPSEINSFHHMIISSSKNVLKMEEVEV-SKKRKFQTDQSD-----------ELS 65

Query: 61  LMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQALSCTRDSS 120
           L+ +       NV C +       +    S S   NS TS+ C   +E+ +  S      
Sbjct: 66  LLPLSKHTCFANVACSENTNGNSEIDTEYSMSSYVNSTTSMECNNDIEMKEESS------ 125

Query: 121 ESTHFCVGSSTAMESSSTEQEVAFARGENQMEAI-HKIQEHMLVLDSHEEHVNDDLEQCT 180
                  GS    +  S E  + +  G   +E    K+ E++L LD  EE   +D + C+
Sbjct: 126 -------GSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQEEE-EEDAKGCS 185

Query: 181 EQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRT--PTIDREFEQFFSMLML 230
                        N   +VLSSGRWTVN +  +   T  PTID+EFEQ+FS LML
Sbjct: 186 S------------NAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLML 202

BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|778683509|ref|XP_004137783.2| (PREDICTED: uncharacterized protein LOC101207650 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 5.1e-82
Identity = 173/256 (67.58%), Postives = 191/256 (74.61%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEISK----------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLH 60
           MEEKE NP EINSFY ISK          KRKLPAEHLGLPSPKHKH +E   SKS FL+
Sbjct: 92  MEEKEQNPAEINSFYVISKLRSNPFDLNKKRKLPAEHLGLPSPKHKHCSEEFASKSAFLY 151

Query: 61  DGLPETELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQAL 120
            GLPETE M VQF K N NV+C DE   PESVKDSNS S+ES+SATSVF GAK ELNQA+
Sbjct: 152 GGLPETEHMNVQFIKENANVLCFDEVSRPESVKDSNSLSEESDSATSVFHGAKFELNQAI 211

Query: 121 SCTRD------------SSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHM 180
           +CT D            SSES HF V SSTAMESSSTEQE AF  GEN+ME I K+QE +
Sbjct: 212 TCTHDTSTTRSMSFGGASSESIHFSVESSTAMESSSTEQETAFPSGENRMETIQKLQEQL 271

Query: 181 LVLDSHE-----EHVNDDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRT 230
           L LDSHE     E+ NDD +QCT+QELE+LF SNGLNPNTY+LSSGRW +NHEAQSR R 
Sbjct: 272 LELDSHEDYNCAEYENDDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARA 331

BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|659083774|ref|XP_008442533.1| (PREDICTED: uncharacterized protein LOC103486380 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.6e-80
Identity = 168/250 (67.20%), Postives = 187/250 (74.80%), Query Frame = 1

Query: 5   EHNPTEINSFYEISK--------KRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPET 64
           E NPTEINSFY ISK        KRKLPAEHLGLPSPKHKH +E   SKS FL+ GLPET
Sbjct: 2   EENPTEINSFYIISKLNPYDLNKKRKLPAEHLGLPSPKHKHCSEGFASKSAFLYGGLPET 61

Query: 65  ELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQALSCTRD- 124
             M VQF K N NV+C DEG  PESVKDSNS S+ES+SATSVF GAK ELNQA++CT D 
Sbjct: 62  GHMNVQFIKENANVLCFDEGSRPESVKDSNSLSEESDSATSVFHGAKFELNQAITCTHDT 121

Query: 125 -----------SSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSH 184
                      SSESTHF V SSTAME  STEQE AF  GEN++E IHK+QEH+L LD H
Sbjct: 122 STTQSMSFGGASSESTHFSVESSTAMELISTEQETAFPSGENRIETIHKLQEHLLELDGH 181

Query: 185 E-----EHVNDDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDRE 230
           E     E+ N D +QCT+QELE+LF SNGLNPNTY+LSSGRW +NHEAQSR R PTID+E
Sbjct: 182 EDYDCAEYENGDTKQCTDQELEELFYSNGLNPNTYILSSGRWAINHEAQSRARAPTIDQE 241

BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|1009157861|ref|XP_015896979.1| (PREDICTED: uncharacterized protein LOC107430630 [Ziziphus jujuba])

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 95/246 (38.62%), Postives = 148/246 (60.16%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEIS-----KKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPE 60
           M++   +P+EINSF  +      KKRKL AE L LP  KHK    +  ++SV +    P+
Sbjct: 1   MDDDNKSPSEINSFRVVDVIRTIKKRKLQAEQLELPMAKHKCWQSSPSNESVSMSIENPD 60

Query: 61  TELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQ------- 120
            + +      G      +++    +S KDSNSF  +S+S TS++  AK+E          
Sbjct: 61  VQSLHSSIIGGKTEEHVLEDRSEHDSGKDSNSFFGDSDSPTSIYVEAKVEPEYVKTYLYD 120

Query: 121 --ALSCTRDSSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSHEE 180
             + S   +S +  ++ + S T +++SS ++E+AF++ ++ +      +EH++   +H +
Sbjct: 121 MPSTSSGTESCKDANYPLDSLTVVKASSGKEELAFSQHDDGIHLFQNHEEHLIEFSNHVD 180

Query: 181 HVN---DDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQF 230
           ++N   +D+EQCT++ELEDL  SN LNPNTYVLSSGRW+VN + QS  R PTID+EFEQ+
Sbjct: 181 YINCEYEDIEQCTDKELEDLLYSNRLNPNTYVLSSGRWSVNQDTQSGARKPTIDQEFEQY 240

BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|1009157679|ref|XP_015896885.1| (PREDICTED: uncharacterized protein LOC107430554 [Ziziphus jujuba])

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 94/246 (38.21%), Postives = 148/246 (60.16%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEIS-----KKRKLPAEHLGLPSPKHKHSNEASPSKSVFLHDGLPE 60
           M++   +P+EINSF  +      KKRKL AE L LP  KHK    +  ++SV +    P+
Sbjct: 1   MDDDNKSPSEINSFRVVDVIRTIKKRKLQAEQLELPMAKHKCWQSSPSNESVSMSIENPD 60

Query: 61  TELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQ------- 120
            + +      G      +++    +S KDSNSF  +S+S TS++  AK+E          
Sbjct: 61  VQSLHSSIIGGKTEEHVLEDRSEHDSGKDSNSFFGDSDSPTSIYVEAKVEPEYVKTYLYD 120

Query: 121 --ALSCTRDSSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSHEE 180
             + S   +S +  ++ + S T +++SS ++E+AF++ ++ +      +EH++   +H +
Sbjct: 121 MPSTSSGTESCKDANYPLDSLTVVKASSGKEELAFSQHDDGIHLFQNHEEHLIEFSNHVD 180

Query: 181 HVN---DDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHEAQSRDRTPTIDREFEQF 230
           ++N   +D+EQCT++ELEDL  SN LNPNTYVLSSGRW++N + QS  R PTID+EFEQ+
Sbjct: 181 YINCEYEDIEQCTDKELEDLLYSNRLNPNTYVLSSGRWSINQDTQSGARKPTIDQEFEQY 240

BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|645220546|ref|XP_008240727.1| (PREDICTED: uncharacterized protein LOC103339227 [Prunus mume])

HSP 1 Score: 130.6 bits (327), Expect = 3.6e-27
Identity = 91/244 (37.30%), Postives = 134/244 (54.92%), Query Frame = 1

Query: 1   MEEKEHNPTEINSFYEIS-----KKRKLPAEHLGLPSPKHKHSNEASPS-KSVFLHDGLP 60
           ME  E NP++I+S + +S     KKRK  AE LGLP PKHK      PS + V + D  P
Sbjct: 1   METYEENPSQIDSSHVMSVLKRIKKRKFQAEQLGLPIPKHKCWERIFPSDEPVSMFDENP 60

Query: 61  ETELMTVQFSKGNPNVICIDEGLTPESVKDSNSFSDESNSATSVFCGAKLELNQALSCTR 120
           E + M    +KG    + +D G   ES K SNSF+ +S+SATSV+  AKLE   A +C  
Sbjct: 61  EVKNMQTCATKGKVEGVILDGGSESESGKGSNSFAGDSDSATSVYVEAKLEPVYARACLN 120

Query: 121 DSSESTHFCVGSSTAMESSSTEQEVAFARGENQMEAIHKIQEHMLVLDSHEEHV-----N 180
           D   +++           ++   + A+  GE  ++A     EH+    +  +++      
Sbjct: 121 DRPSTSY-----------ANEVHQPAYPDGE--IQAFENYDEHLQEFGNQVDYIFSEYGE 180

Query: 181 DDLEQCTEQELEDLFRSNGLNPNTYVLSSGRWTVNHE----AQSRDRTPTIDREFEQFFS 230
           D ++QC ++E+ED+    G N N Y+LSSGRW+VN +      + +R PTID+EFEQ+FS
Sbjct: 181 DCIDQCKDKEIEDVIYPIGSNTNKYILSSGRWSVNQDNSDVQSASNRKPTIDQEFEQYFS 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FHY1_ARATH5.7e-0928.94Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana GN=FHY1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LFJ8_CUCSA3.5e-8267.58Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734140 PE=4 SV=1[more]
B9HBT1_POPTR7.2e-2735.25Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s08760g PE=4 SV=1[more]
D7THL8_VITVI2.1e-2636.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g00610 PE=4 SV=... [more]
A0A0D2NDW2_GOSRA3.0e-2539.18Uncharacterized protein OS=Gossypium raimondii GN=B456_001G249600 PE=4 SV=1[more]
W9S766_9ROSA1.5e-2444.19Uncharacterized protein OS=Morus notabilis GN=L484_009441 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G37678.13.2e-1028.94 far-red elongated hypocotyl 1[more]
Match NameE-valueIdentityDescription
gi|778683509|ref|XP_004137783.2|5.1e-8267.58PREDICTED: uncharacterized protein LOC101207650 [Cucumis sativus][more]
gi|659083774|ref|XP_008442533.1|1.6e-8067.20PREDICTED: uncharacterized protein LOC103486380 [Cucumis melo][more]
gi|1009157861|ref|XP_015896979.1|1.0e-3438.62PREDICTED: uncharacterized protein LOC107430630 [Ziziphus jujuba][more]
gi|1009157679|ref|XP_015896885.1|1.4e-3438.21PREDICTED: uncharacterized protein LOC107430554 [Ziziphus jujuba][more]
gi|645220546|ref|XP_008240727.1|3.6e-2737.30PREDICTED: uncharacterized protein LOC103339227 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009639 response to red or far red light
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G002890.1CmoCh06G002890.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37723FAMILY NOT NAMEDcoord: 1..229
score: 1.3
NoneNo IPR availablePANTHERPTHR37723:SF1FHL-3coord: 1..229
score: 1.3

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G002890CmoCh14G001310Cucurbita moschata (Rifu)cmocmoB222
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G002890Wax gourdcmowgoB1026
CmoCh06G002890Wax gourdcmowgoB1033
CmoCh06G002890Cucurbita moschata (Rifu)cmocmoB189
CmoCh06G002890Cucurbita moschata (Rifu)cmocmoB375
CmoCh06G002890Cucurbita moschata (Rifu)cmocmoB422
CmoCh06G002890Cucurbita moschata (Rifu)cmocmoB436
CmoCh06G002890Cucurbita moschata (Rifu)cmocmoB453
CmoCh06G002890Cucurbita moschata (Rifu)cmocmoB483
CmoCh06G002890Cucumber (Gy14) v1cgycmoB0101
CmoCh06G002890Cucurbita maxima (Rimu)cmacmoB488
CmoCh06G002890Cucurbita maxima (Rimu)cmacmoB568
CmoCh06G002890Cucurbita maxima (Rimu)cmacmoB624
CmoCh06G002890Cucurbita maxima (Rimu)cmacmoB664
CmoCh06G002890Cucurbita maxima (Rimu)cmacmoB873
CmoCh06G002890Wild cucumber (PI 183967)cmocpiB811
CmoCh06G002890Wild cucumber (PI 183967)cmocpiB834
CmoCh06G002890Wild cucumber (PI 183967)cmocpiB841
CmoCh06G002890Cucumber (Chinese Long) v2cmocuB804
CmoCh06G002890Cucumber (Chinese Long) v2cmocuB825
CmoCh06G002890Cucumber (Chinese Long) v2cmocuB831
CmoCh06G002890Melon (DHL92) v3.5.1cmomeB741
CmoCh06G002890Melon (DHL92) v3.5.1cmomeB742
CmoCh06G002890Melon (DHL92) v3.5.1cmomeB764
CmoCh06G002890Watermelon (Charleston Gray)cmowcgB738
CmoCh06G002890Watermelon (Charleston Gray)cmowcgB741
CmoCh06G002890Watermelon (Charleston Gray)cmowcgB742
CmoCh06G002890Watermelon (97103) v1cmowmB787
CmoCh06G002890Watermelon (97103) v1cmowmB797
CmoCh06G002890Watermelon (97103) v1cmowmB798
CmoCh06G002890Cucurbita pepo (Zucchini)cmocpeB763
CmoCh06G002890Cucurbita pepo (Zucchini)cmocpeB775
CmoCh06G002890Cucurbita pepo (Zucchini)cmocpeB782
CmoCh06G002890Cucurbita pepo (Zucchini)cmocpeB793
CmoCh06G002890Bottle gourd (USVL1VR-Ls)cmolsiB738
CmoCh06G002890Bottle gourd (USVL1VR-Ls)cmolsiB739
CmoCh06G002890Bottle gourd (USVL1VR-Ls)cmolsiB743
CmoCh06G002890Bottle gourd (USVL1VR-Ls)cmolsiB747
CmoCh06G002890Bottle gourd (USVL1VR-Ls)cmolsiB751
CmoCh06G002890Cucumber (Gy14) v2cgybcmoB131
CmoCh06G002890Cucumber (Gy14) v2cgybcmoB536
CmoCh06G002890Cucumber (Gy14) v2cgybcmoB677
CmoCh06G002890Cucumber (Gy14) v2cgybcmoB838
CmoCh06G002890Melon (DHL92) v3.6.1cmomedB843
CmoCh06G002890Melon (DHL92) v3.6.1cmomedB844
CmoCh06G002890Melon (DHL92) v3.6.1cmomedB868
CmoCh06G002890Silver-seed gourdcarcmoB0794
CmoCh06G002890Silver-seed gourdcarcmoB1248
CmoCh06G002890Cucumber (Chinese Long) v3cmocucB0973
CmoCh06G002890Cucumber (Chinese Long) v3cmocucB0977
CmoCh06G002890Cucumber (Chinese Long) v3cmocucB0983
CmoCh06G002890Watermelon (97103) v2cmowmbB828
CmoCh06G002890Watermelon (97103) v2cmowmbB830
CmoCh06G002890Watermelon (97103) v2cmowmbB831
CmoCh06G002890Watermelon (97103) v2cmowmbB843