CmoCh06G002890 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGGTTTGGCATCTGGGTTTTTAAAGATTCTTGCTCTAATCGACTCATTTATCAGTTTTCGAATCTGTTTCTTGTACTGTTTGATGTCTGTTTAATGTCGGTCTAGTGCTAAAACGGTGGATGTGAATCGAGATGGGGTTTTTGATTCATTTCTGTTGCTTAATCTTTTTAGCGTCTGATCATTGGATTTCACTTATTCCCCGTTCTAGAACTTCCCTCAACCCTATATTCATTAAGTAATTTTGTGAGAGATTGAAGCATTTTCTCTTGTAGTTCCTGTCTTGCATCTTTTATCCTGTCTCTTGTCTGATGAATTATGTTGTTTTTTGTTAAACTTTTGCAGTTTCTATGAGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGATGGCCTACCCGAAACAGAGCTTATGACTGTACAATTCTCAAAGGGTAATCCAAATGTAATTTGTATCGACGAGGGGTTGACGCCTGAATCGGTAAAAGACAGCAATAGCTTCAGCGACGAGTCCAATTCTGCGACGTCCGTGTTCTGTGGAGCAAAATTGGAACTGAACCAGGCTTTATCTTGCACACGTGATAGTTCTGAAAGCACCCATTTCTGTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACCAAATGGAAGCAATTCACAAAATTCAGGAGCATATGCTAGTATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGCAGGAACTTGAGGATCTTTTCCGTTCGAATGGGTTGAACCCGAATACATATGTTCTTTCGTCTGGTAGATGGACAGTAAACCACGGTAATAAACACATGATCCATAAGAATTTTGATCCGTTCCATGTGCATTCATATTTATCCATTTACTAAATCACACTCTTCTCTTGATTCAGAAGCTCAATCAAGAGATAGAACACCGACGATCGATCGAGAATTCGAGCAGTTCTTTTCTATGTTGATGCTATAATCGTGAATGCTCGTTTGACTACGAGGTAACAATATGTATATAGTTCAAATGCCATAGTCTTTATGAATTATATGGATATCAATTCCATGTTGTTGCTGTAACTCTGAAGTTTACAGAAACAACAAAATGAAGAATCGAAGCGAGAAAAGAGGAGAGATTCATGAAGAGTTTATACAACAACAGGTTTTATTTGTTCTACAGAAAACAGAGTAAAGGAAGCCCACTCTGTTTCCTTAAAACAGAGCACACACGACGAAGAGGGATAAAGAAAGGAATCTGGGGATGTTTTAAGTTTACAAAGATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTGATTTAAAAATGGAACATTTTGGATGGTGAAAGACAAGTTGTTCCCTCACCTGGGTTATCGGCGAAGAAACGGAAAGCCAACCAGCCGCCGGAGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACAATAAAGAAATTATATCCATGAAGATGGAGTGGATGACTCTCCGCCCCCAAAATACTCGTCCCCTGCAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAAGGAAAAACCGGCTTGGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGAGCAAAAGAGACATTATTAACAGAGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGCGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTGGCAAGAGACCGGAATTTTCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGCCGGAGTTTGGGTGGTGGGTGGGTCGCCGTACTGGAGGATTCCGACGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGCCGTTGGTGAAATTGGGATTTGTTTTAAGAAGAACATTGGAGGTTTGGCCGGGAGTGAGTAATATCACGTCGGTTTGAAAGGGCTTGACGTAAACGGCGTCGGCTTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATCAACCGGAGTAGGTACGTTTTTCCAGGCTTCACTTTTAGCTTAAATGTATCTGAAAATCAAAATATAATCATTTTTAGTGTTAATTAAACAAGATTAATAGAGAGATTAAAGTGATTACCATTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCGGAAACATTCGGCGCTGCTCCGGTCTGAAGCGCCTGCTGAATCACACTCTCCGGCCTCACATTGAACCACTCACCCAAAATGATTGGGACTTCTCTGTGGGGCTTCTCGAACGGATATGACTCATTCCGGCGAGGGAGGATGATAATGGCGCCGTGAACTGTGGCTCTCAGCCACGAGATATGGCCGTGCCAAAGCAGAGTCCCTCTTTGGCCGTTGAGTGAAAAATTATAGGTGTAAGCTTGGCCGGTCTGGATCGGACATTGGGTCACATAAGCCGGTCCGTCGGCCCAACCGGTTCGGATCTGCCGGACGCCGTGCCAGTGGATGGTGACGTTCTCAGCCACGTGGTTGATGACCTTGATCAAGACTCTGTCGCCTTCTCTGGCCACCACTGGCGGCCCGGGGAGCTGCCGGTTGACGGTTAGAAGGTTCACCGTATGGCACAGCCTCGTCACGTTCTGGTACCCTATCTGTAAAACCCGCCGCCAGTCATTATTCCACGCTGTTCCGGTGACCTTTTTTTAAATTTTTTTATTTTAAATTTAAAAATAAATAAATAAAAAGAAAAGAAAAACGGCCATACATTGAAAGTGTAGTGTCTGGTTACCCCGAACGCAAGCTCCGGCAAGAAACACGACAGAAGTGAGAGAAAAACAGTCAGTGCCGCCATTGATGAAGGCTCTGAAAGGCGGAAGGCGGCCATGGAAATTCAGTACCTGTGGAAGAAGATGAATAAATGGGGGTTAATAAATAGAGAAAATTTGATTTTTATTTTTAATTTTATAATTTCACACAGTTTAATTTGAACAACCATGATTATGATTTATATTTCTTTAAAATTAAGGAATTTCTTGTTGAATTGTTTCATTTCATCACACTGTTCTTCTTTTTGTCCCTTGTTCTTTTGTAGTTATACATTTAAGTTTAAGTCAAGTTAATTATAGAATATATTTCAT ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGTTTCTATGAGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGATGGCCTACCCGAAACAGAGCTTATGACTGTACAATTCTCAAAGGGTAATCCAAATGTAATTTGTATCGACGAGGGGTTGACGCCTGAATCGGTAAAAGACAGCAATAGCTTCAGCGACGAGTCCAATTCTGCGACGTCCGTGTTCTGTGGAGCAAAATTGGAACTGAACCAGGCTTTATCTTGCACACGTGATAGTTCTGAAAGCACCCATTTCTGTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACCAAATGGAAGCAATTCACAAAATTCAGGAGCATATGCTAGTATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGCAGGAACTTGAGGATCTTTTCCGTTCGAATGGGTTGAACCCGAATACATATGTTCTTTCGTCTGGTAGATGGACAGTAAACCACGAAGCTCAATCAAGAGATAGAACACCGACGATCGATCGAGAATTCGAGCAGTTCTTTTCTATGTTGATGCTATAATCGTGAATGCTCGTTTGACTACGAGTTTACAGAAACAACAAAATGAAGAATCGAAGCGAGAAAAGAGGAGAGATTCATGAAGAGTTTATACAACAACAGGTTTTATTTGTTCTACAGAAAACAGAGTAAAGGAAGCCCACTCTGTTTCCTTAAAACAGAGCACACACGACGAAGAGGGATAAAGAAAGGAATCTGGGGATGTTTTAAGTTTACAAAGATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTGATTTAAAAATGGAACATTTTGGATGGTGAAAGACAAGTTGTTCCCTCACCTGGGTTATCGGCGAAGAAACGGAAAGCCAACCAGCCGCCGGAGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACAATAAAGAAATTATATCCATGAAGATGGAGTGGATGACTCTCCGCCCCCAAAATACTCGTCCCCTGCAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAAGGAAAAACCGGCTTGGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGAGCAAAAGAGACATTATTAACAGAGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGCGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTGGCAAGAGACCGGAATTTTCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGCCGGAGTTTGGGTGGTGGGTGGGTCGCCGTACTGGAGGATTCCGACGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGCCGTTGGTGAAATTGGGATTTGTTTTAAGAAGAACATTGGAGGTTTGGCCGGGAGTGAGTAATATCACGTCGGTTTGAAAGGGCTTGACGTAAACGGCGTCGGCTTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATCAACCGGAGTAGGTACGTTTTTCCAGGCTTCACTTTTAGCTTAAATGTATCTGAAAATCAAAATATAATCATTTTTAGTGTTAATTAAACAAGATTAATAGAGAGATTAAAGTGATTACCATTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCGGAAACATTCGGCGCTGCTCCGGTCTGAAGCGCCTGCTGAATCACACTCTCCGGCCTCACATTGAACCACTCACCCAAAATGATTGGGACTTCTCTGTGGGGCTTCTCGAACGGATATGACTCATTCCGGCGAGGGAGGATGATAATGGCGCCGTGAACTGTGGCTCTCAGCCACGAGATATGGCCGTGCCAAAGCAGAGTCCCTCTTTGGCCGTTGAGTGAAAAATTATAGGTGTAAGCTTGGCCGGTCTGGATCGGACATTGGGTCACATAAGCCGGTCCGTCGGCCCAACCGGTTCGGATCTGCCGGACGCCGTGCCAGTGGATGGTGACGTTCTCAGCCACGTGGTTGATGACCTTGATCAAGACTCTGTCGCCTTCTCTGGCCACCACTGGCGGCCCGGGGAGCTGCCGGTTGACGGTTAGAAGGTTCACCGTATGGCACAGCCTCGTCACGTTCTGGTACCCTATCTGTAAAACCCGCCGCCAGTCATTATTCCACGCTGTTCCGGTGACCTTTTTTTAAATTTTTTTATTTTAAATTTAAAAATAAATAAATAAAAAGAAAAGAAAAACGGCCATACATTGAAAGTGTAGTGTCTGGTTACCCCGAACGCAAGCTCCGGCAAGAAACACGACAGAAGTGAGAGAAAAACAGTCAGTGCCGCCATTGATGAAGGCTCTGAAAGGCGGAAGGCGGCCATGGAAATTCAGTACCTGTGGAAGAAGATGAATAAATGGGGGTTAATAAATAGAGAAAATTTGATTTTTATTTTTAATTTTATAATTTCACACAGTTTAATTTGAACAACCATGATTATGATTTATATTTCTTTAAAATTAAGGAATTTCTTGTTGAATTGTTTCATTTCATCACACTGTTCTTCTTTTTGTCCCTTGTTCTTTTGTAGTTATACATTTAAGTTTAAGTCAAGTTAATTATAGAATATATTTCAT ATGGAGGAGAAGGAACATAACCCAACTGAGATCAACAGTTTCTATGAGATTTCCAAGAAAAGAAAACTGCCAGCTGAACACTTGGGCTTGCCTTCACCAAAACATAAACACAGCAATGAAGCCTCCCCTTCCAAATCTGTCTTTCTTCATGATGGCCTACCCGAAACAGAGCTTATGACTGTACAATTCTCAAAGGGTAATCCAAATGTAATTTGTATCGACGAGGGGTTGACGCCTGAATCGGTAAAAGACAGCAATAGCTTCAGCGACGAGTCCAATTCTGCGACGTCCGTGTTCTGTGGAGCAAAATTGGAACTGAACCAGGCTTTATCTTGCACACGTGATAGTTCTGAAAGCACCCATTTCTGTGTTGGAAGTTCCACAGCAATGGAATCGAGCTCGACCGAACAGGAAGTAGCGTTTGCGAGAGGGGAGAACCAAATGGAAGCAATTCACAAAATTCAGGAGCATATGCTAGTATTGGATAGCCATGAAGAACATGTAAATGATGATCTTGAGCAATGTACAGAGCAGGAACTTGAGGATCTTTTCCGTTCGAATGGGTTGAACCCGAATACATATGTTCTTTCGTCTGGTAGATGGACAGTAAACCACGAAGCTCAATCAAGAGATAGAACACCGACGATCGATCGAGAATTCGAGCAGTTCTTTTCTATGTTGATGCTATAA
BLAST of CmoCh06G002890 vs. Swiss-Prot
Match: FHY1_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana GN=FHY1 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.7e-09 Identity = 68/235 (28.94%), Postives = 99/235 (42.13%), Query Frame = 1
BLAST of CmoCh06G002890 vs. TrEMBL
Match: A0A0A0LFJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734140 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 3.5e-82 Identity = 173/256 (67.58%), Postives = 191/256 (74.61%), Query Frame = 1
BLAST of CmoCh06G002890 vs. TrEMBL
Match: B9HBT1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s08760g PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.2e-27 Identity = 92/261 (35.25%), Postives = 140/261 (53.64%), Query Frame = 1
BLAST of CmoCh06G002890 vs. TrEMBL
Match: D7THL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g00610 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26 Identity = 93/255 (36.47%), Postives = 132/255 (51.76%), Query Frame = 1
BLAST of CmoCh06G002890 vs. TrEMBL
Match: A0A0D2NDW2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G249600 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.0e-25 Identity = 96/245 (39.18%), Postives = 139/245 (56.73%), Query Frame = 1
BLAST of CmoCh06G002890 vs. TrEMBL
Match: W9S766_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009441 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24 Identity = 76/172 (44.19%), Postives = 108/172 (62.79%), Query Frame = 1
BLAST of CmoCh06G002890 vs. TAIR10
Match: AT2G37678.1 (AT2G37678.1 far-red elongated hypocotyl 1) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10 Identity = 68/235 (28.94%), Postives = 99/235 (42.13%), Query Frame = 1
BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|778683509|ref|XP_004137783.2| (PREDICTED: uncharacterized protein LOC101207650 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 5.1e-82 Identity = 173/256 (67.58%), Postives = 191/256 (74.61%), Query Frame = 1
BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|659083774|ref|XP_008442533.1| (PREDICTED: uncharacterized protein LOC103486380 [Cucumis melo]) HSP 1 Score: 307.8 bits (787), Expect = 1.6e-80 Identity = 168/250 (67.20%), Postives = 187/250 (74.80%), Query Frame = 1
BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|1009157861|ref|XP_015896979.1| (PREDICTED: uncharacterized protein LOC107430630 [Ziziphus jujuba]) HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34 Identity = 95/246 (38.62%), Postives = 148/246 (60.16%), Query Frame = 1
BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|1009157679|ref|XP_015896885.1| (PREDICTED: uncharacterized protein LOC107430554 [Ziziphus jujuba]) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 94/246 (38.21%), Postives = 148/246 (60.16%), Query Frame = 1
BLAST of CmoCh06G002890 vs. NCBI nr
Match: gi|645220546|ref|XP_008240727.1| (PREDICTED: uncharacterized protein LOC103339227 [Prunus mume]) HSP 1 Score: 130.6 bits (327), Expect = 3.6e-27 Identity = 91/244 (37.30%), Postives = 134/244 (54.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |