CmoCh05G005160 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G005160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	F-box protein
Location	Cmo_Chr05 : 2497991 .. 2499061 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGTTCAAGAACAAGAAGCTTCTTCTTCAATTCGCGTCGCCGGTGACGGCTTCGACTCTCTTCCCGATTCCCTCGTTCTTGTGATATTTAACTTTGTCTCCGATGTCAAATCCTTGATCCGTTGCAGAGCCGTTTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGACTATACCGTTTCCTCCGATTCCGAGTCCGATCCCGATTCTGATTCCGATTCCGATTACGTTCCAAACTCCAAATTATTCGACTTCTTCAAAACTACCTTGGAATCGTTCTTCTATTTTATGTCCCCTGTTTTCCTCAAATCCAAATCGCAGACGTCTCCCGCGCAAATCCTCCGCCAGTTCCACCGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAGGACCTTGAAGTTGCGAGAGCCGTTAAATGGAGAGCGGAGTTCGGTGAAACGCTTAGGAGCTGCGTGATTTTGAGTTTTCACAAGATTAGGAAATTCGATGGTCGGGCGATGATGGCTGTGGATGATTTCGGTGTCAATTTCTTCCCAAGGATGGAAGCGAGAGTGACCTGGTTGATGCGCACTCTGATAACGGCGTTGGCGAGGCACCACGTGATGGTGGAGGTGGTGGTGGAGCATTTGGAGATGAATCATCTGGTGTTGAGAGACGAGGGAGGGAATGGTGTGGTGGTGATCGAGAAGAATGGTTTAGACGATATTAGGAGATCGAGAGTTTGCGGCGGCGGCGACGGCGGAGAGACATCGGAGAGACGGACGGCGGAGAGGCGGACGTTGAGAACTAGAGTACCGAGAACGACGGTTAGGATGAAGTACTGGCCATTGCTCGATCTCCAGCACGGGCTATGTATGGAGGACGCTACGTTGGTGGTGGTGAGGCCCACTGGAAATGCCAGCGAGGATGAAACTGCTGACATGGGGAAAGAAGACGCTGACTTGGCACTGAGCGCATTTGAAGATAATGATATGTACACAGTCGCCGTGGCAGCGTTGTTGACGAAGGGTACTAGGCTTAAGATGGGGATAAACTCTTTCTAG

mRNA sequence

ATGGCGGAAGTTCAAGAACAAGAAGCTTCTTCTTCAATTCGCGTCGCCGGTGACGGCTTCGACTCTCTTCCCGATTCCCTCGTTCTTGTGATATTTAACTTTGTCTCCGATGTCAAATCCTTGATCCGTTGCAGAGCCGTTTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGACTATACCGTTTCCTCCGATTCCGAGTCCGATCCCGATTCTGATTCCGATTCCGATTACGTTCCAAACTCCAAATTATTCGACTTCTTCAAAACTACCTTGGAATCGTTCTTCTATTTTATGTCCCCTGTTTTCCTCAAATCCAAATCGCAGACGTCTCCCGCGCAAATCCTCCGCCAGTTCCACCGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAGGACCTTGAAGTTGCGAGAGCCGTTAAATGGAGAGCGGAGTTCGGTGAAACGCTTAGGAGCTGCGTGATTTTGAGTTTTCACAAGATTAGGAAATTCGATGGTCGGGCGATGATGGCTGTGGATGATTTCGGTGTCAATTTCTTCCCAAGGATGGAAGCGAGAGTGACCTGGTTGATGCGCACTCTGATAACGGCGTTGGCGAGGCACCACGTGATGGTGGAGGTGGTGGTGGAGCATTTGGAGATGAATCATCTGGTGTTGAGAGACGAGGGAGGGAATGGTGTGGTGGTGATCGAGAAGAATGGTTTAGACGATATTAGGAGATCGAGAGTTTGCGGCGGCGGCGACGGCGGAGAGACATCGGAGAGACGGACGGCGGAGAGGCGGACGTTGAGAACTAGAGTACCGAGAACGACGGTTAGGATGAAGTACTGGCCATTGCTCGATCTCCAGCACGGGCTATGTATGGAGGACGCTACGTTGGTGGTGGTGAGGCCCACTGGAAATGCCAGCGAGGATGAAACTGCTGACATGGGGAAAGAAGACGCTGACTTGGCACTGAGCGCATTTGAAGATAATGATATGTACACAGTCGCCGTGGCAGCGTTGTTGACGAAGGGTACTAGGCTTAAGATGGGGATAAACTCTTTCTAG

Coding sequence (CDS)

ATGGCGGAAGTTCAAGAACAAGAAGCTTCTTCTTCAATTCGCGTCGCCGGTGACGGCTTCGACTCTCTTCCCGATTCCCTCGTTCTTGTGATATTTAACTTTGTCTCCGATGTCAAATCCTTGATCCGTTGCAGAGCCGTTTCGAAGCGCTTCAACTCCCTCGTTCCTCATTCCGATTCCCTTTTTCTCAAGATCGACTATACCGTTTCCTCCGATTCCGAGTCCGATCCCGATTCTGATTCCGATTCCGATTACGTTCCAAACTCCAAATTATTCGACTTCTTCAAAACTACCTTGGAATCGTTCTTCTATTTTATGTCCCCTGTTTTCCTCAAATCCAAATCGCAGACGTCTCCCGCGCAAATCCTCCGCCAGTTCCACCGGATCCAGCGCCTCCAGATCGAGTTTCCGACTAAGGACCTTGAAGTTGCGAGAGCCGTTAAATGGAGAGCGGAGTTCGGTGAAACGCTTAGGAGCTGCGTGATTTTGAGTTTTCACAAGATTAGGAAATTCGATGGTCGGGCGATGATGGCTGTGGATGATTTCGGTGTCAATTTCTTCCCAAGGATGGAAGCGAGAGTGACCTGGTTGATGCGCACTCTGATAACGGCGTTGGCGAGGCACCACGTGATGGTGGAGGTGGTGGTGGAGCATTTGGAGATGAATCATCTGGTGTTGAGAGACGAGGGAGGGAATGGTGTGGTGGTGATCGAGAAGAATGGTTTAGACGATATTAGGAGATCGAGAGTTTGCGGCGGCGGCGACGGCGGAGAGACATCGGAGAGACGGACGGCGGAGAGGCGGACGTTGAGAACTAGAGTACCGAGAACGACGGTTAGGATGAAGTACTGGCCATTGCTCGATCTCCAGCACGGGCTATGTATGGAGGACGCTACGTTGGTGGTGGTGAGGCCCACTGGAAATGCCAGCGAGGATGAAACTGCTGACATGGGGAAAGAAGACGCTGACTTGGCACTGAGCGCATTTGAAGATAATGATATGTACACAGTCGCCGTGGCAGCGTTGTTGACGAAGGGTACTAGGCTTAAGATGGGGATAAACTCTTTCTAG

Homology

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BLAST of CmoCh05G005160 vs. Swiss-Prot
Match: FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.4e-51
Identity = 138/355 (38.87%), Postives = 201/355 (56.62%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD++PD +V+ I N V DVK+LIRCR+VSKRFNSL   S+SL L++D  + +      
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGA-----T 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLK--------SKSQTSPAQILRQFHRI 137
           +SDS+ D    S +  FF++  +S    + P+F K        ++S  +PAQIL  F RI
Sbjct: 62  ESDSEID----SPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERI 121

Query: 138 QRLQIEFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMA------VDD 197
           + L++E    D  LE   AVKW+AEFG+TL+SCVI++F         A  A      V +
Sbjct: 122 RNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVE 181

Query: 198 FGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNG 257
               F   ++ RV W +  L+ A  RH++M ++V +H EM  L++RD  G G VV++  G
Sbjct: 182 SDSEFVCGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAG 241

Query: 258 LDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLV 317
           + + R + V G        + + +ER   RT VP   + M++ P L L+ G+C+E ATLV
Sbjct: 242 MKEYRETEVRG--------DNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLV 301

Query: 318 VVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
           VVRPTG AS+D   ++  E    A +   D+ MY  AV ALL K  R  + +NSF
Sbjct: 302 VVRPTGVASDDNDVELVTE----AFAGDGDDCMYGEAVTALL-KRRRNVLEMNSF 334

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BLAST of CmoCh05G005160 vs. Swiss-Prot
Match: FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.3e-47
Identity = 132/346 (38.15%), Postives = 198/346 (57.23%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD LPD +++ I N V DVK+L+RC ++SKRFNSLVP S+SL L++D++V        
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSV-------- 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMS----PVFLKSKSQTSPAQILRQFHRIQRLQ 137
              SDS  V +      F++        +S    P+ + + S + P +IL +F RI+ L 
Sbjct: 62  ---SDSPVVTS-----IFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLD 121

Query: 138 IEFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVD-DFGVNFFPRM 197
           +E P  D  LE   AVKW+AEFG+TL+SCVI++F         + +AV+ +    F   +
Sbjct: 122 VELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAGTVS--SPVAVEGESDAEFVTGL 181

Query: 198 EARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRV 257
           + RV W +  L+ A +RH++M EVV EH E+  LV+RD+   G VV+ + GL ++R +  
Sbjct: 182 KTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEA 241

Query: 258 CGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNAS 317
                  E  ER    +R++   VP   + M++ P L L+ G+C+E ATLV+VRP+G  +
Sbjct: 242 -----RVEDEERVVKNKRSV---VPSVRMSMRHAPSLKLKSGICLESATLVIVRPSG--A 301

Query: 318 EDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
           + E  D    DA+LA  AF  + MY  AV ALL K  +  + +NSF
Sbjct: 302 DFEVGD----DAELATEAFVGDCMYGEAVVALL-KCKKNALEMNSF 314

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BLAST of CmoCh05G005160 vs. Swiss-Prot
Match: FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.5e-36
Identity = 121/381 (31.76%), Postives = 192/381 (50.39%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD+LPDS++L+IFN + DVK+L RC  VSKRF+SL+P  +++F+++D  +S D  S  
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 78  DSD---SDSDYVPNSKLFDFFKTTLESFFYFM------------SPVFL----------- 137
            SD   S S   P S +F      L++   F+            SP  L           
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 138 -KSKSQTSPAQILRQFHRIQRLQIEFPTKDLEVARAV--KWRAEFGETLRSCVILSFHKI 197
               +  SP Q+L+ F  I+ L+IE P+ +L +   V  KWRAEFG TL +CVIL    +
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSV 202

Query: 198 --------RKFDGRAMMAVDDFG---VNFFPR--MEARVTWLMRTLITALARHHVMVEVV 257
                    +     + AV+D G    +F+    ++ RV W + +LI A ARH+++  ++
Sbjct: 203 IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPII 262

Query: 258 VEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVP 317
            EH  ++ LVL D  G GV+ + ++ L+++R   +             +A   + RT VP
Sbjct: 263 AEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPL-------------SASSASKRTLVP 322

Query: 318 RTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMY 357
              +R+ Y P L+L  G  ++ ATLV +RP         ++  KE  D++  +   ++ Y
Sbjct: 323 ALNMRLWYAPSLELPDGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPY 380

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BLAST of CmoCh05G005160 vs. Swiss-Prot
Match: FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.4e-32
Identity = 116/379 (30.61%), Postives = 183/379 (48.28%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD LPDSL+L+IF+ V+DVK L RC  VS+RF+SLVP  +++ +++D  +S D  S  
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 78  D------------SDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTS------- 137
           D            SD+       S LF      +   F  +  +    +S +S       
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143

Query: 138 -----------PAQILRQFHRIQRLQIEFPTKDLEVARAV--KWRAEFGETLRSCVILSF 197
                      P Q+L+ F  I+ L+IE PT +L +   +  KWRA+FG TL +C+IL  
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGA 203

Query: 198 HKIRKFDG--RAMMAVDDFGVN----FFPR--MEARVTWLMRTLITALARHHVMVEVVVE 257
             + + +       +VD+   N    F+    ++ RV W + +LI A ARH+++  ++ E
Sbjct: 204 SSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINE 263

Query: 258 HLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRT 317
           H  ++ LVL D  G GV+ + +  L+++R + +             +A   + RT VP  
Sbjct: 264 HKSLDRLVLSDADGQGVLCMNREQLEELRVTPL-------------SASSASKRTLVPAL 323

Query: 318 TVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTV 357
            +R+ Y P LDL  G  ++ ATLV +RP+ +  E         DA     AFE+      
Sbjct: 324 NMRLWYAPELDLPDGTVLKGATLVAIRPSESKKE-------VCDASWLSDAFEEP---FG 379

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BLAST of CmoCh05G005160 vs. Swiss-Prot
Match: FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-21
Identity = 82/260 (31.54%), Postives = 129/260 (49.62%), Query Frame = 1


Query: 118 SPAQILRQFHRIQRLQIEFPTKDLEVARAV--KWRAEFGETLRSCVILSFHKI------- 177
           SP Q+L+ F  I+ L+IE P+ +L +   V  KWRAEFG TL +CVIL    +       
Sbjct: 159 SPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVIPPNPMR 218

Query: 178 --RKFDGRAMMAV-----DDFGV---NFFPR--MEARVTWLMRTLITALARHHVMVEVVV 237
             +  D   ++       DD G    +F+    ++ RV W + +LI A ARH+++  ++ 
Sbjct: 219 VSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIA 278

Query: 238 EHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPR 297
           EH  ++ LVL D  G GV+ + ++ L+++R   +             +A +RTL   VP 
Sbjct: 279 EHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAAS----------SASKRTL---VPA 338

Query: 298 TTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYT 357
             +R+ Y P L+L  G  ++ ATLV +RP+ +  E         D     SAFE  + Y 
Sbjct: 339 LNMRLWYAPTLELPDGTVLKGATLVAIRPSESKKE-------VSDISWVSSAFE--EPYE 395

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BLAST of CmoCh05G005160 vs. TrEMBL
Match: A0A0A0LN04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307320 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.2e-91
Identity = 204/368 (55.43%), Postives = 256/368 (69.57%), Query Frame = 1


Query: 1   MAEVQEQE----ASSSIRVAG--------DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVS 60
           MAE QE+E    ASSS   +         D F+SLPDSL+L+IFN VSDVK+LIRCRAVS
Sbjct: 1   MAEQQEREQQQNASSSSSSSSPTIYTNDADAFESLPDSLILLIFNSVSDVKTLIRCRAVS 60

Query: 61  KRFNSLVPHSDSLFLKIDYTVSSDSESDPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSP 120
           KRFNSLVPHSDSL LK+D  +S        SDSDSD   NS L  FFK+ L+SF   +SP
Sbjct: 61  KRFNSLVPHSDSLSLKVDCVIS--------SDSDSDSHQNSFLLSFFKSVLKSFLDLLSP 120

Query: 121 VFLKSKSQTSPAQILRQFHRIQRLQIEFPTKDLEVARAVKWRAEFGETLRSCVILSFHKI 180
           + L+S+SQ SPAQILRQF RIQ LQIEFPT DL+V R VKWRAEFG+ L+SCVIL F +I
Sbjct: 121 ILLQSESQNSPAQILRQFRRIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREI 180

Query: 181 RKFDGRAMMAVDDFGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRD 240
           RK  G       D  ++F   ++++V   + T+ITA ARHHV+ EVV EHLEM  L LRD
Sbjct: 181 RK--GAIEEDDVDSDLDFIGGLKSKVFMTISTVITASARHHVLGEVVEEHLEMESLALRD 240

Query: 241 EGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLD 300
            GG GVVV+EK GL+++RR R+   GDGGE      AE R  RTRVP TTVRM++   ++
Sbjct: 241 RGGEGVVVMEKKGLEELRRWRM---GDGGE-----VAEWRRTRTRVPSTTVRMRHKGRVE 300

Query: 301 LQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTR 357
           ++ G+ MEDATLVVV+P+GN  +    ++ KEDA++A+ AFE +D+Y  AV ALL KG R
Sbjct: 301 VRRGMWMEDATLVVVKPSGNGRKSGDGEVDKEDAEVAVRAFEGDDVYREAVEALLRKGKR 350

[Close]

BLAST of CmoCh05G005160 vs. TrEMBL
Match: W9S0P0_9ROSA (F-box protein OS=Morus notabilis GN=L484_021557 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.7e-57
Identity = 164/361 (45.43%), Postives = 211/361 (58.45%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           DGFD LPDSL+L+IFN VSD+K+L+RCRAV +RFNSLVP ++SL LK+D  VS DS    
Sbjct: 2   DGFDQLPDSLILLIFNSVSDIKTLLRCRAVCQRFNSLVPQTESLLLKVDCVVSPDS---- 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKS-----QTSPAQILRQFHRIQRL 137
            +D D D   +S LF F K+ L+S    +SP  L + S     Q SP+QILR F R++ L
Sbjct: 62  -ADRDGD---DSFLFTFLKSILKSLHDLVSPNPLSNPSSLKPPQNSPSQILRGFDRVRNL 121

Query: 138 QIEFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGV---NFF 197
           +IE P+ D  LE    VKW AEFG +LRSCVIL F  IR  +  A +  D  G    +F 
Sbjct: 122 EIELPSGDMRLEKGAVVKWTAEFGTSLRSCVILGFRAIRDSE-TAAIGGDSAGAGEEDFA 181

Query: 198 PRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDD--- 257
             ++ RV W +  LI A ARH+ + EVV E  E+  LVL D  G G VV++K GL +   
Sbjct: 182 RGLKTRVVWTISALIAASARHYFLREVVREQRELRRLVLTDREGEGTVVMDKAGLAELRG 241

Query: 258 ---------IRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCM 317
                    +RR  V   GDG E  E   AER   RTRVP   +RM++ P L+L+ G   
Sbjct: 242 GGGAAEVAHVRREEVVVEGDGEEEEEDDVAERN--RTRVPSVRMRMRHAPRLELKGGFWA 301

Query: 318 EDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINS 357
           E ATLVVVRPT   S  +  D   E+A+LA  AF +  +Y  AV +LL K     + +NS
Sbjct: 302 EGATLVVVRPTKEGSGAQVGD-DVEEANLATMAFGEG-LYGEAVGSLL-KCRSYILEMNS 348

[Close]

BLAST of CmoCh05G005160 vs. TrEMBL
Match: K4BTT0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 149/349 (42.69%), Postives = 207/349 (59.31%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           DGFD LPD L+ ++FN +SD+K+LIRCR+VSKRFNSLVP +DSL L++D  +S+      
Sbjct: 9   DGFDRLPDPLIHLMFNQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISA-----T 68

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSP---VFLKSKSQTSPAQILRQFHRIQRLQI 137
           DSD D D    S L  F ++ ++S  + +SP   +   ++SQ SPAQILR+F RI+ LQI
Sbjct: 69  DSDDDDD----SFLIAFLRSIIKSIHHLVSPSKVLPTPARSQNSPAQILREFERIRNLQI 128

Query: 138 EFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGVNFFPRMEA 197
           E P+ D  LE    ++W+A+FG+TL+SCVIL F   R  DG    A  +FG      ++ 
Sbjct: 129 ELPSGDLRLEKGTTIRWKADFGKTLKSCVILGF---RSGDGGGGEA--EFGGGAGAGLKM 188

Query: 198 RVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCG 257
           RV W +  LI A ARH++MVEVV EH E+ +LV++D    G VV++K GL + R S+  G
Sbjct: 189 RVVWTISALIAASARHYMMVEVVNEHKELENLVIKDRDDEGKVVMDKKGLRECRESQ--G 248

Query: 258 GGDGGETSERRTAER-----RTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTG 317
            G+  E +   +        R  RT VP   +RM +   ++L  G+ M  ATLVVVRPT 
Sbjct: 249 EGEEAEVNNASSGNGVGLWWRNNRTTVPAVRMRMWHEARMELSGGMKMVGATLVVVRPTN 308

Query: 318 NASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
              E    +    D  LAL AF ++ +Y  AV  LL K     + +NSF
Sbjct: 309 GGGERSEVEEQNGDVGLALGAFGEDAVYCEAVERLL-KSRSYILEMNSF 340

[Close]

BLAST of CmoCh05G005160 vs. TrEMBL
Match: M1AK96_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009478 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 149/349 (42.69%), Postives = 207/349 (59.31%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           DGFD LPD L+ ++FN +SD+K+LIRCR+VSKRFNSLVP +DSL L++D  +S+      
Sbjct: 9   DGFDRLPDPLIHLMFNQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISA-----T 68

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSP---VFLKSKSQTSPAQILRQFHRIQRLQI 137
           DSD D D    S L  F ++ ++S  + +SP   +   ++SQ SPAQILR+F RI+ LQI
Sbjct: 69  DSDDDDD----SFLIAFLRSIIKSLHHLVSPSKALPSPARSQNSPAQILREFERIRNLQI 128

Query: 138 EFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGVNFFPRMEA 197
           E P+ D  LE    ++W+A+FG+TL+SCVIL F   R  DG    A  +FG      ++ 
Sbjct: 129 ELPSGDLRLEKGTTIRWKADFGKTLKSCVILGF---RSGDGGGGEA--EFGGGAGAGLKM 188

Query: 198 RVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCG 257
           RV W +  LI A ARH++MVEVV EH E+ +LV++D    G VV++K GL + R S+  G
Sbjct: 189 RVVWTISALIAASARHYMMVEVVNEHKELENLVIKDRDDEGKVVMDKKGLKECRESQ--G 248

Query: 258 GGDGGETSERRTAER-----RTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTG 317
            G+  E +   +        R  RT VP   +RM +   ++L  G+ M  ATLVVVRPT 
Sbjct: 249 EGEEAEVNNASSGNGVGLWWRNNRTTVPAVRMRMWHEARMELSGGMKMVGATLVVVRPTN 308

Query: 318 NASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
              E    +    D  LAL AF ++ +Y  AV  LL K     + +NSF
Sbjct: 309 GGGERSEVEEQNGDVGLALGAFGEDAVYCEAVERLL-KSRSYILEMNSF 340

[Close]

BLAST of CmoCh05G005160 vs. TrEMBL
Match: B9H746_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0005s16930g PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.7e-54
Identity = 149/346 (43.06%), Postives = 202/346 (58.38%), Query Frame = 1


Query: 16  AGDGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSES 75
           A DGFD LPDSL+L+IFN +SD+K+LIRCR+VSKRFNSLVP ++SL LK+D  +S     
Sbjct: 4   AMDGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVIS----- 63

Query: 76  DPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSP---VFLKSKSQTSPAQILRQFHRIQRL 135
            P+SDSDS       LF  FK+ L+S      P      ++++Q SPA+IL QF RI+ L
Sbjct: 64  -PESDSDS-------LFTLFKSLLKSIHDLFKPDPKPTARNQTQNSPARILSQFDRIRDL 123

Query: 136 QIEFPTKDLEVAR--AVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGVNFFPRM 195
           QIE P  DL++ +   +KWRAEFG++L+SCVIL F ++   +G +     D  ++F   +
Sbjct: 124 QIELPAGDLKLEKGAVIKWRAEFGKSLKSCVILGFRRVANPEGNSA----DEEIDFTGGL 183

Query: 196 EARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRV 255
           + RV W +  LI A ARH+++ +VV  H EM  LVL D  G G V +EK GL + R +  
Sbjct: 184 KTRVVWAISALIAASARHYLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECREA-- 243

Query: 256 CGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNAS 315
                GGE  E         RT VP   +RM++   + L+ G+ ME  TLVVVRP     
Sbjct: 244 ---ARGGEWEEDGG------RTVVPSVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSGGG 303

Query: 316 EDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
           +        EDA+LAL AF    +Y  AV  LL K     + +NSF
Sbjct: 304 DG-------EDAELALGAF-GGGIYGEAVQVLL-KNKSYLLEMNSF 312

[Close]

BLAST of CmoCh05G005160 vs. TAIR10
Match: AT1G78100.1 (AT1G78100.1 F-box family protein)

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-52
Identity = 138/355 (38.87%), Postives = 201/355 (56.62%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD++PD +V+ I N V DVK+LIRCR+VSKRFNSL   S+SL L++D  + +      
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGA-----T 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLK--------SKSQTSPAQILRQFHRI 137
           +SDS+ D    S +  FF++  +S    + P+F K        ++S  +PAQIL  F RI
Sbjct: 62  ESDSEID----SPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERI 121

Query: 138 QRLQIEFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMA------VDD 197
           + L++E    D  LE   AVKW+AEFG+TL+SCVI++F         A  A      V +
Sbjct: 122 RNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVE 181

Query: 198 FGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNG 257
               F   ++ RV W +  L+ A  RH++M ++V +H EM  L++RD  G G VV++  G
Sbjct: 182 SDSEFVCGLKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAG 241

Query: 258 LDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLV 317
           + + R + V G        + + +ER   RT VP   + M++ P L L+ G+C+E ATLV
Sbjct: 242 MKEYRETEVRG--------DNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLV 301

Query: 318 VVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
           VVRPTG AS+D   ++  E    A +   D+ MY  AV ALL K  R  + +NSF
Sbjct: 302 VVRPTGVASDDNDVELVTE----AFAGDGDDCMYGEAVTALL-KRRRNVLEMNSF 334

[Close]

BLAST of CmoCh05G005160 vs. TAIR10
Match: AT1G22220.1 (AT1G22220.1 F-box family protein)

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-48
Identity = 132/346 (38.15%), Postives = 198/346 (57.23%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD LPD +++ I N V DVK+L+RC ++SKRFNSLVP S+SL L++D++V        
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSV-------- 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMS----PVFLKSKSQTSPAQILRQFHRIQRLQ 137
              SDS  V +      F++        +S    P+ + + S + P +IL +F RI+ L 
Sbjct: 62  ---SDSPVVTS-----IFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLD 121

Query: 138 IEFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVD-DFGVNFFPRM 197
           +E P  D  LE   AVKW+AEFG+TL+SCVI++F         + +AV+ +    F   +
Sbjct: 122 VELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSAGTVS--SPVAVEGESDAEFVTGL 181

Query: 198 EARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRV 257
           + RV W +  L+ A +RH++M EVV EH E+  LV+RD+   G VV+ + GL ++R +  
Sbjct: 182 KTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEA 241

Query: 258 CGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNAS 317
                  E  ER    +R++   VP   + M++ P L L+ G+C+E ATLV+VRP+G  +
Sbjct: 242 -----RVEDEERVVKNKRSV---VPSVRMSMRHAPSLKLKSGICLESATLVIVRPSG--A 301

Query: 318 EDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
           + E  D    DA+LA  AF  + MY  AV ALL K  +  + +NSF
Sbjct: 302 DFEVGD----DAELATEAFVGDCMYGEAVVALL-KCKKNALEMNSF 314

[Close]

BLAST of CmoCh05G005160 vs. TAIR10
Match: AT4G18380.1 (AT4G18380.1 F-box family protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-37
Identity = 121/381 (31.76%), Postives = 192/381 (50.39%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD+LPDS++L+IFN + DVK+L RC  VSKRF+SL+P  +++F+++D  +S D  S  
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 78  DSD---SDSDYVPNSKLFDFFKTTLESFFYFM------------SPVFL----------- 137
            SD   S S   P S +F      L++   F+            SP  L           
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 138 -KSKSQTSPAQILRQFHRIQRLQIEFPTKDLEVARAV--KWRAEFGETLRSCVILSFHKI 197
               +  SP Q+L+ F  I+ L+IE P+ +L +   V  KWRAEFG TL +CVIL    +
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSV 202

Query: 198 --------RKFDGRAMMAVDDFG---VNFFPR--MEARVTWLMRTLITALARHHVMVEVV 257
                    +     + AV+D G    +F+    ++ RV W + +LI A ARH+++  ++
Sbjct: 203 IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPII 262

Query: 258 VEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVP 317
            EH  ++ LVL D  G GV+ + ++ L+++R   +             +A   + RT VP
Sbjct: 263 AEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPL-------------SASSASKRTLVP 322

Query: 318 RTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMY 357
              +R+ Y P L+L  G  ++ ATLV +RP         ++  KE  D++  +   ++ Y
Sbjct: 323 ALNMRLWYAPSLELPDGTVLKGATLVAIRP---------SESKKEVCDVSWVSSAFDEPY 380

[Close]

BLAST of CmoCh05G005160 vs. TAIR10
Match: AT1G30200.2 (AT1G30200.2 F-box family protein)

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33
Identity = 116/379 (30.61%), Postives = 183/379 (48.28%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           D FD LPDSL+L+IF+ V+DVK L RC  VS+RF+SLVP  +++ +++D  +S D  S  
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 78  D------------SDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKSQTS------- 137
           D            SD+       S LF      +   F  +  +    +S +S       
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSSFDASFSA 143

Query: 138 -----------PAQILRQFHRIQRLQIEFPTKDLEVARAV--KWRAEFGETLRSCVILSF 197
                      P Q+L+ F  I+ L+IE PT +L +   +  KWRA+FG TL +C+IL  
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGA 203

Query: 198 HKIRKFDG--RAMMAVDDFGVN----FFPR--MEARVTWLMRTLITALARHHVMVEVVVE 257
             + + +       +VD+   N    F+    ++ RV W + +LI A ARH+++  ++ E
Sbjct: 204 SSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINE 263

Query: 258 HLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRT 317
           H  ++ LVL D  G GV+ + +  L+++R + +             +A   + RT VP  
Sbjct: 264 HKSLDRLVLSDADGQGVLCMNREQLEELRVTPL-------------SASSASKRTLVPAL 323

Query: 318 TVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTV 357
            +R+ Y P LDL  G  ++ ATLV +RP+ +  E         DA     AFE+      
Sbjct: 324 NMRLWYAPELDLPDGTVLKGATLVAIRPSESKKE-------VCDASWLSDAFEEP---FG 379

[Close]

BLAST of CmoCh05G005160 vs. TAIR10
Match: AT5G46170.1 (AT5G46170.1 F-box family protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.3e-22
Identity = 82/260 (31.54%), Postives = 129/260 (49.62%), Query Frame = 1


Query: 118 SPAQILRQFHRIQRLQIEFPTKDLEVARAV--KWRAEFGETLRSCVILSFHKI------- 177
           SP Q+L+ F  I+ L+IE P+ +L +   V  KWRAEFG TL +CVIL    +       
Sbjct: 159 SPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVIPPNPMR 218

Query: 178 --RKFDGRAMMAV-----DDFGV---NFFPR--MEARVTWLMRTLITALARHHVMVEVVV 237
             +  D   ++       DD G    +F+    ++ RV W + +LI A ARH+++  ++ 
Sbjct: 219 VSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIA 278

Query: 238 EHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPR 297
           EH  ++ LVL D  G GV+ + ++ L+++R   +             +A +RTL   VP 
Sbjct: 279 EHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAAS----------SASKRTL---VPA 338

Query: 298 TTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYT 357
             +R+ Y P L+L  G  ++ ATLV +RP+ +  E         D     SAFE  + Y 
Sbjct: 339 LNMRLWYAPTLELPDGTVLKGATLVAIRPSESKKE-------VSDISWVSSAFE--EPYE 395

[Close]

BLAST of CmoCh05G005160 vs. NCBI nr
Match: gi|659089131|ref|XP_008445343.1| (PREDICTED: F-box protein At1g22220 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 2.4e-94
Identity = 203/364 (55.77%), Postives = 260/364 (71.43%), Query Frame = 1


Query: 1   MAEVQEQEASSSIRVAG--------DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFN 60
           MA+ QEQ+ ++S   +         DGFDSLPDSL+L+IFN VSDVK+LIRCRAVSKRFN
Sbjct: 1   MAQQQEQQQNASSSSSSSMIHTNDHDGFDSLPDSLILLIFNSVSDVKTLIRCRAVSKRFN 60

Query: 61  SLVPHSDSLFLKIDYTVSSDSESDPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLK 120
           SLVPHSDSL L +D  +SSDS+SD DSD       NS L  FFK+ ++SF   +SP+ ++
Sbjct: 61  SLVPHSDSLSLTVDCVISSDSDSDSDSDQ------NSFLLSFFKSVVKSFLDLLSPILVQ 120

Query: 121 SKSQTSPAQILRQFHRIQRLQIEFPTKDLEVARAVKWRAEFGETLRSCVILSFHKIRKFD 180
           S++Q SPAQILRQF +IQ LQIEFPT DL+V R VKWRAEFG+ L+SCVIL F +IRK  
Sbjct: 121 SETQNSPAQILRQFLQIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRK-- 180

Query: 181 GRAMMAVDDFGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGN 240
           G       D+ ++F   ++++V   + TLITA ARHHV+ EVV EHLEM  LVLRD GG 
Sbjct: 181 GAIEEDDVDYNLDFIGGLKSKVFMTISTLITASARHHVLGEVVEEHLEMESLVLRDRGGE 240

Query: 241 GVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHG 300
           GVVV+EK GL+++RR R+   GDGGE      AE R  RTRVP TTVRM++   ++++ G
Sbjct: 241 GVVVMEKKGLEELRRWRM---GDGGE-----VAEWRRTRTRVPSTTVRMRHRGRVEVRRG 300

Query: 301 LCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMG 357
           + MEDATLVVVRP+GN  +    D+ KEDA++A+ AFE +D+Y  AV ALL KG R ++ 
Sbjct: 301 MWMEDATLVVVRPSGNCRKSGDGDVDKEDAEVAVKAFEGDDVYREAVEALLKKGKRYQLE 348

[Close]

BLAST of CmoCh05G005160 vs. NCBI nr
Match: gi|778670222|ref|XP_004150662.2| (PREDICTED: F-box protein At1g22220 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 3.2e-91
Identity = 204/368 (55.43%), Postives = 256/368 (69.57%), Query Frame = 1


Query: 1   MAEVQEQE----ASSSIRVAG--------DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVS 60
           MAE QE+E    ASSS   +         D F+SLPDSL+L+IFN VSDVK+LIRCRAVS
Sbjct: 1   MAEQQEREQQQNASSSSSSSSPTIYTNDADAFESLPDSLILLIFNSVSDVKTLIRCRAVS 60

Query: 61  KRFNSLVPHSDSLFLKIDYTVSSDSESDPDSDSDSDYVPNSKLFDFFKTTLESFFYFMSP 120
           KRFNSLVPHSDSL LK+D  +S        SDSDSD   NS L  FFK+ L+SF   +SP
Sbjct: 61  KRFNSLVPHSDSLSLKVDCVIS--------SDSDSDSHQNSFLLSFFKSVLKSFLDLLSP 120

Query: 121 VFLKSKSQTSPAQILRQFHRIQRLQIEFPTKDLEVARAVKWRAEFGETLRSCVILSFHKI 180
           + L+S+SQ SPAQILRQF RIQ LQIEFPT DL+V R VKWRAEFG+ L+SCVIL F +I
Sbjct: 121 ILLQSESQNSPAQILRQFRRIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREI 180

Query: 181 RKFDGRAMMAVDDFGVNFFPRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRD 240
           RK  G       D  ++F   ++++V   + T+ITA ARHHV+ EVV EHLEM  L LRD
Sbjct: 181 RK--GAIEEDDVDSDLDFIGGLKSKVFMTISTVITASARHHVLGEVVEEHLEMESLALRD 240

Query: 241 EGGNGVVVIEKNGLDDIRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLD 300
            GG GVVV+EK GL+++RR R+   GDGGE      AE R  RTRVP TTVRM++   ++
Sbjct: 241 RGGEGVVVMEKKGLEELRRWRM---GDGGE-----VAEWRRTRTRVPSTTVRMRHKGRVE 300

Query: 301 LQHGLCMEDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTR 357
           ++ G+ MEDATLVVV+P+GN  +    ++ KEDA++A+ AFE +D+Y  AV ALL KG R
Sbjct: 301 VRRGMWMEDATLVVVKPSGNGRKSGDGEVDKEDAEVAVRAFEGDDVYREAVEALLRKGKR 350

[Close]

BLAST of CmoCh05G005160 vs. NCBI nr
Match: gi|645225641|ref|XP_008219667.1| (PREDICTED: F-box protein At1g22220 [Prunus mume])

HSP 1 Score: 234.6 bits (597), Expect = 2.7e-58
Identity = 155/343 (45.19%), Postives = 205/343 (59.77%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           DGFD LPDSL+L IF+ VSDVK+LIRCRAVSKRFNSLVP +DSL L +D  +SSDS+SD 
Sbjct: 2   DGFDRLPDSLILQIFDSVSDVKTLIRCRAVSKRFNSLVPQTDSLLLTVDRVISSDSDSDS 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVF--LKSKSQTSPAQILRQFHRIQRLQIE 137
            +D  S       L  F K+ L+S    +SP     +++SQ SPAQILR FH ++ L IE
Sbjct: 62  ANDDVSHL-----LVTFLKSILKSIHDLVSPRPDPTRARSQNSPAQILRSFHNVRNLSIE 121

Query: 138 FPTKDLEVARA--VKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGVNFFPRMEAR 197
            P+ DL + +   +KWRA+FG+TLRSCVIL F  +    G   +  DD   +F   ++ R
Sbjct: 122 LPSGDLRLEKGTVLKWRADFGKTLRSCVILGFRSVVA-GGETPVPGDD--ADFAGGLKVR 181

Query: 198 VTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCGG 257
           V W +  LI A ARH+++ EVV E   +  LVLRD  G GVVV+EK GL +  R   C  
Sbjct: 182 VVWTISALIAASARHYLLKEVVREQRGLETLVLRDREGEGVVVMEKEGLRECGREDTC-- 241

Query: 258 GDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNASEDE 317
            D  E  E         R+RVP   +RM++ P ++L+ G+ +E ATLVVVRP+ +     
Sbjct: 242 -DAEEEEEEEEEGWDRGRSRVPSVRMRMRHVPRMELKGGVWVEGATLVVVRPSLSGD--- 301

Query: 318 TADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
                 ED DLA+ AF  + +Y   V ALL K     + +NSF
Sbjct: 302 -----VEDGDLAMGAFGGDVLYGEVVEALL-KAKSYLLEMNSF 324

[Close]

BLAST of CmoCh05G005160 vs. NCBI nr
Match: gi|703135539|ref|XP_010105899.1| (F-box protein [Morus notabilis])

HSP 1 Score: 230.7 bits (587), Expect = 3.9e-57
Identity = 164/361 (45.43%), Postives = 211/361 (58.45%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           DGFD LPDSL+L+IFN VSD+K+L+RCRAV +RFNSLVP ++SL LK+D  VS DS    
Sbjct: 2   DGFDQLPDSLILLIFNSVSDIKTLLRCRAVCQRFNSLVPQTESLLLKVDCVVSPDS---- 61

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSPVFLKSKS-----QTSPAQILRQFHRIQRL 137
            +D D D   +S LF F K+ L+S    +SP  L + S     Q SP+QILR F R++ L
Sbjct: 62  -ADRDGD---DSFLFTFLKSILKSLHDLVSPNPLSNPSSLKPPQNSPSQILRGFDRVRNL 121

Query: 138 QIEFPTKD--LEVARAVKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGV---NFF 197
           +IE P+ D  LE    VKW AEFG +LRSCVIL F  IR  +  A +  D  G    +F 
Sbjct: 122 EIELPSGDMRLEKGAVVKWTAEFGTSLRSCVILGFRAIRDSE-TAAIGGDSAGAGEEDFA 181

Query: 198 PRMEARVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDD--- 257
             ++ RV W +  LI A ARH+ + EVV E  E+  LVL D  G G VV++K GL +   
Sbjct: 182 RGLKTRVVWTISALIAASARHYFLREVVREQRELRRLVLTDREGEGTVVMDKAGLAELRG 241

Query: 258 ---------IRRSRVCGGGDGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCM 317
                    +RR  V   GDG E  E   AER   RTRVP   +RM++ P L+L+ G   
Sbjct: 242 GGGAAEVAHVRREEVVVEGDGEEEEEDDVAERN--RTRVPSVRMRMRHAPRLELKGGFWA 301

Query: 318 EDATLVVVRPTGNASEDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINS 357
           E ATLVVVRPT   S  +  D   E+A+LA  AF +  +Y  AV +LL K     + +NS
Sbjct: 302 EGATLVVVRPTKEGSGAQVGD-DVEEANLATMAFGEG-LYGEAVGSLL-KCRSYILEMNS 348

[Close]

BLAST of CmoCh05G005160 vs. NCBI nr
Match: gi|743900526|ref|XP_011043565.1| (PREDICTED: F-box protein At1g22220-like [Populus euphratica])

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 152/346 (43.93%), Postives = 204/346 (58.96%), Query Frame = 1


Query: 18  DGFDSLPDSLVLVIFNFVSDVKSLIRCRAVSKRFNSLVPHSDSLFLKIDYTVSSDSESDP 77
           DGFD LPDSL+L+IFN +SD+K+LIRCR+VSKRFNSLVP ++SL LK+D  +S      P
Sbjct: 15  DGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVIS------P 74

Query: 78  DSDSDSDYVPNSKLFDFFKTTLESFFYFMSP---VFLKSKSQTSPAQILRQFHRIQRLQI 137
           +SDSDS       LF  FK+ L+S   F  P      ++++Q SPA+IL QF+RI+ LQI
Sbjct: 75  ESDSDS-------LFTLFKSLLKSIHDFFKPDPKTTARNQTQNSPARILSQFNRIRDLQI 134

Query: 138 EFPTKDLEVARA--VKWRAEFGETLRSCVILSFHKIRKFDGRAMMAVDDFGVNFFPRMEA 197
           E P  DL++ +   +KWRAEFG++L+SCVIL F ++   +G +     D  +NF   ++ 
Sbjct: 135 ELPAGDLKLEKGAVIKWRAEFGKSLKSCVILGFRRVANPEGNSA----DEEINFTGGLKT 194

Query: 198 RVTWLMRTLITALARHHVMVEVVVEHLEMNHLVLRDEGGNGVVVIEKNGLDDIRRSRVCG 257
           RV W +  LI A ARH+++ +VV EH EM  LVL D  G G V IEK GL + R +   G
Sbjct: 195 RVVWAISALIAASARHYLLNDVVKEHREMERLVLVDREGEGTVAIEKEGLRECREAARGG 254

Query: 258 GG--DGGETSERRTAERRTLRTRVPRTTVRMKYWPLLDLQHGLCMEDATLVVVRPTGNAS 317
               DGG             RT VP   +RM++   + L+ G+ ME  TLVVVRP     
Sbjct: 255 QWEEDGG-------------RTVVPCVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSGGG 314

Query: 318 EDETADMGKEDADLALSAFEDNDMYTVAVAALLTKGTRLKMGINSF 357
           +        EDA+LAL AF    +Y  AV  LL K     + +NSF
Sbjct: 315 DG-------EDAELALGAF-GGGIYGEAVQVLL-KNKSYLLEMNSF 321

The following BLAST results are available for this feature:

BLAST of CmoCh05G005160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB91_ARATH	9.4e-51	38.87	F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1	[more]
FB303_ARATH	6.3e-47	38.15	F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1	[more]
FB237_ARATH	8.5e-36	31.76	F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1	[more]
FB19_ARATH	4.4e-32	30.61	F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1	[more]
FB285_ARATH	5.9e-21	31.54	F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1	[more]

BLAST of CmoCh05G005160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN04_CUCSA	2.2e-91	55.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307320 PE=4 SV=1	[more]
W9S0P0_9ROSA	2.7e-57	45.43	F-box protein OS=Morus notabilis GN=L484_021557 PE=4 SV=1	[more]
K4BTT0_SOLLC	1.5e-55	42.69	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M1AK96_SOLTU	1.5e-55	42.69	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009478 PE=4 SV=1	[more]
B9H746_POPTR	3.7e-54	43.06	F-box family protein OS=Populus trichocarpa GN=POPTR_0005s16930g PE=4 SV=1	[more]

BLAST of CmoCh05G005160 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78100.1	5.3e-52	38.87	F-box family protein	[more]
AT1G22220.1	3.6e-48	38.15	F-box family protein	[more]
AT4G18380.1	4.8e-37	31.76	F-box family protein	[more]
AT1G30200.2	2.5e-33	30.61	F-box family protein	[more]
AT5G46170.1	3.3e-22	31.54	F-box family protein	[more]

BLAST of CmoCh05G005160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089131\|ref\|XP_008445343.1\|	2.4e-94	55.77	PREDICTED: F-box protein At1g22220 [Cucumis melo]	[more]
gi\|778670222\|ref\|XP_004150662.2\|	3.2e-91	55.43	PREDICTED: F-box protein At1g22220 [Cucumis sativus]	[more]
gi\|645225641\|ref\|XP_008219667.1\|	2.7e-58	45.19	PREDICTED: F-box protein At1g22220 [Prunus mume]	[more]
gi\|703135539\|ref\|XP_010105899.1\|	3.9e-57	45.43	F-box protein [Morus notabilis]	[more]
gi\|743900526\|ref\|XP_011043565.1\|	1.5e-56	43.93	PREDICTED: F-box protein At1g22220-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009914	hormone transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005160.1	CmoCh05G005160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 21..61 score: 3.
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 23..64 score: 2.
IPR001810	F-box domain	PROFILE	PS50181	FBOX	coord: 17..65 score:
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 14..75 score: 8.37
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 18..71 score: 1.
None	No IPR available	PANTHER	PTHR31215	FAMILY NOT NAMED	coord: 1..356 score: 8.8
None	No IPR available	PANTHER	PTHR31215:SF6	SUBFAMILY NOT NAMED	coord: 1..356 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G005160	Cucsa.154470	Cucumber (Gy14) v1	cgycmoB0425
CmoCh05G005160	CmaCh12G001510	Cucurbita maxima (Rimu)	cmacmoB192
CmoCh05G005160	CmaCh05G004930	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G005160	Cla022088	Watermelon (97103) v1	cmowmB746
CmoCh05G005160	Csa2G307320	Cucumber (Chinese Long) v2	cmocuB786
CmoCh05G005160	MELO3C011360	Melon (DHL92) v3.5.1	cmomeB715
CmoCh05G005160	ClCG08G011030	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G005160	CSPI02G15820	Wild cucumber (PI 183967)	cmocpiB789
CmoCh05G005160	Lsi08G009570	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G005160	Cp4.1LG11g04330	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G005160	Cp4.1LG07g01260	Cucurbita pepo (Zucchini)	cmocpeB744
CmoCh05G005160	MELO3C011360.2	Melon (DHL92) v3.6.1	cmomedB812
CmoCh05G005160	CsaV3_1G022880	Cucumber (Chinese Long) v3	cmocucB0916
CmoCh05G005160	Cla97C08G153970	Watermelon (97103) v2	cmowmbB800
CmoCh05G005160	Bhi04G000617	Wax gourd	cmowgoB0937
CmoCh05G005160	CsGy2G016420	Cucumber (Gy14) v2	cgybcmoB245
CmoCh05G005160	Carg20546	Silver-seed gourd	carcmoB0894

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G005160	Cucumber (Chinese Long) v3	cmocucB0942
CmoCh05G005160	Watermelon (97103) v2	cmowmbB775
CmoCh05G005160	Wax gourd	cmowgoB0954
CmoCh05G005160	Cucurbita moschata (Rifu)	cmocmoB150
CmoCh05G005160	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh05G005160	Cucumber (Gy14) v1	cgycmoB0230
CmoCh05G005160	Wild cucumber (PI 183967)	cmocpiB804
CmoCh05G005160	Cucumber (Chinese Long) v2	cmocuB799
CmoCh05G005160	Melon (DHL92) v3.5.1	cmomeB733
CmoCh05G005160	Watermelon (Charleston Gray)	cmowcgB698
CmoCh05G005160	Watermelon (97103) v1	cmowmB755
CmoCh05G005160	Bottle gourd (USVL1VR-Ls)	cmolsiB707
CmoCh05G005160	Cucumber (Gy14) v2	cgybcmoB829
CmoCh05G005160	Melon (DHL92) v3.6.1	cmomedB830