Cla022088 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022088
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	F-box family protein (AHRD V1 ***- D7KV76_ARALL); contains Interpro domain(s) IPR001810 Cyclin-like F-box
Location	Chr8 : 20295940 .. 20296953 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGCGGAAGAACAACGACAAGAACAAGAACAAAATTCTTCTTCAATCCACAACAACGATGACGGCTTTGATTCTCTTCCCGATCCCCTCATTCTTCTGATCTTCAACTCTGTTTCCGATGTCAAAACTTTGATCCGTTGCAGAGCCGTTTCCAAGCGTTTCAACTCTCTCGTTCCTCATTCCGATTCCCTTTCTCTCAAGGTCGATTGCGTCATTCCCTCCGATTCCGACCAAAACTCCTTCCTCCTCACCTTCTTCAAATCCGTCGTCAAATCCTTCTTCCATTTGATTTCCCCTATTCTTGTCCAATCCGAATCACAAAACTCTCCAGCTCAAATCCTCCGTCAGTTCCGCCAGATCCAGCGCCTTCAGATCGAGTTTCCGACTGGAGATCTCAAGGTCGAGAGAGTTGTTAGATGGAGAGCGGAGTTCGGCGACGCGCTTAAGAGCTGTGTGATTTTGATTTTTCGAGGGATTCGGAATGGAGCGGCAGATGATGTCGATTTCGATTTCATCGGAGGGCTGAAATCTAAAGTGTTTATGACGATTAGTACTCTGATTACGGCGTCGGCGAGGCACCACGTGTTGGCGGAGGTGGTGGAGGAGCATTTGGAGATGGAGAGTTTGGTTTTGAGAGACAGGGGAGGGGAAGGCGCGGTGGTGATGGAGAAGAATGGTTTAGAAGAGTTGAGGAAATGGAGAGTTGGTGACGGCGGAGAGGTGGCGGAGTGGAGGCGGACGAGAACAAGGGTTCCGAGCACGACGGTGAGAATGAGGCACCAGGGGAAGGTGGAGCTCCGGCGAGGGATGTGGATGGAGGATGCCACGTTGGTGGTGGTGAGGCCCACAGGAAATGCCAGCAACAGCAAGAGTGGAGCTGCTGACGTGGAGAAAGATGATGCAGACGTGGCACTGAGGGCATTTGAAGGCGATGATGTGTACAGAGAGGCAGTGGAAGCGTTACTGAAGAAGGGGAAGAAATATCAGTTAGAAATGAACTCTTTCTAG

mRNA sequence

ATGGCGGAAGCGGAAGAACAACGACAAGAACAAGAACAAAATTCTTCTTCAATCCACAACAACGATGACGGCTTTGATTCTCTTCCCGATCCCCTCATTCTTCTGATCTTCAACTCTGTTTCCGATGTCAAAACTTTGATCCGTTGCAGAGCCGTTTCCAAGCGTTTCAACTCTCTCGTTCCTCATTCCGATTCCCTTTCTCTCAAGGTCGATTGCGTCATTCCCTCCGATTCCGACCAAAACTCCTTCCTCCTCACCTTCTTCAAATCCGTCGTCAAATCCTTCTTCCATTTGATTTCCCCTATTCTTGTCCAATCCGAATCACAAAACTCTCCAGCTCAAATCCTCCGTCAGTTCCGCCAGATCCAGCGCCTTCAGATCGAGTTTCCGACTGGAGATCTCAAGGTCGAGAGAGTTGTTAGATGGAGAGCGGAGTTCGGCGACGCGCTTAAGAGCTGTGTGATTTTGATTTTTCGAGGGATTCGGAATGGAGCGGCAGATGATGTCGATTTCGATTTCATCGGAGGGCTGAAATCTAAAGTGTTTATGACGATTAGTACTCTGATTACGGCGTCGGCGAGGCACCACGTGTTGGCGGAGGTGGTGGAGGAGCATTTGGAGATGGAGAGTTTGGTTTTGAGAGACAGGGGAGGGGAAGGCGCGGTGGTGATGGAGAAGAATGGTTTAGAAGAGTTGAGGAAATGGAGAGTTGGTGACGGCGGAGAGGTGGCGGAGTGGAGGCGGACGAGAACAAGGGTTCCGAGCACGACGGTGAGAATGAGGCACCAGGGGAAGGTGGAGCTCCGGCGAGGGATGTGGATGGAGGATGCCACGTTGGTGGTGGTGAGGCCCACAGGAAATGCCAGCAACAGCAAGAGTGGAGCTGCTGACGTGGAGAAAGATGATGCAGACGTGGCACTGAGGGCATTTGAAGGCGATGATGTGTACAGAGAGGCAGTGGAAGCGTTACTGAAGAAGGGGAAGAAATATCAGTTAGAAATGAACTCTTTCTAG

Coding sequence (CDS)

ATGGCGGAAGCGGAAGAACAACGACAAGAACAAGAACAAAATTCTTCTTCAATCCACAACAACGATGACGGCTTTGATTCTCTTCCCGATCCCCTCATTCTTCTGATCTTCAACTCTGTTTCCGATGTCAAAACTTTGATCCGTTGCAGAGCCGTTTCCAAGCGTTTCAACTCTCTCGTTCCTCATTCCGATTCCCTTTCTCTCAAGGTCGATTGCGTCATTCCCTCCGATTCCGACCAAAACTCCTTCCTCCTCACCTTCTTCAAATCCGTCGTCAAATCCTTCTTCCATTTGATTTCCCCTATTCTTGTCCAATCCGAATCACAAAACTCTCCAGCTCAAATCCTCCGTCAGTTCCGCCAGATCCAGCGCCTTCAGATCGAGTTTCCGACTGGAGATCTCAAGGTCGAGAGAGTTGTTAGATGGAGAGCGGAGTTCGGCGACGCGCTTAAGAGCTGTGTGATTTTGATTTTTCGAGGGATTCGGAATGGAGCGGCAGATGATGTCGATTTCGATTTCATCGGAGGGCTGAAATCTAAAGTGTTTATGACGATTAGTACTCTGATTACGGCGTCGGCGAGGCACCACGTGTTGGCGGAGGTGGTGGAGGAGCATTTGGAGATGGAGAGTTTGGTTTTGAGAGACAGGGGAGGGGAAGGCGCGGTGGTGATGGAGAAGAATGGTTTAGAAGAGTTGAGGAAATGGAGAGTTGGTGACGGCGGAGAGGTGGCGGAGTGGAGGCGGACGAGAACAAGGGTTCCGAGCACGACGGTGAGAATGAGGCACCAGGGGAAGGTGGAGCTCCGGCGAGGGATGTGGATGGAGGATGCCACGTTGGTGGTGGTGAGGCCCACAGGAAATGCCAGCAACAGCAAGAGTGGAGCTGCTGACGTGGAGAAAGATGATGCAGACGTGGCACTGAGGGCATTTGAAGGCGATGATGTGTACAGAGAGGCAGTGGAAGCGTTACTGAAGAAGGGGAAGAAATATCAGTTAGAAATGAACTCTTTCTAG

Protein sequence

MAEAEEQRQEQEQNSSSIHNNDDGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNSFLLTFFKSVVKSFFHLISPILVQSESQNSPAQILRQFRQIQRLQIEFPTGDLKVERVVRWRAEFGDALKSCVILIFRGIRNGAADDVDFDFIGGLKSKVFMTISTLITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDADVALRAFEGDDVYREAVEALLKKGKKYQLEMNSF

Homology

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BLAST of Cla022088 vs. Swiss-Prot
Match: FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-64
Identity = 146/323 (45.20%), Postives = 202/323 (62.54%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
           D FD LPDP+I+ I N V DVKTL+RC ++SKRFNSLVP S+SL+L++D  +       S
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVTS 61

Query: 83  FLLTFFKSVVKSFFHLISPILVQSESQNSPAQILRQFRQIQRLQIEFPTGDLKVER--VV 142
              + F  +V        PI + + S + P +IL +F +I+ L +E P GD+K+E+   V
Sbjct: 62  IFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLDVELPGGDVKLEKGAAV 121

Query: 143 RWRAEFGDALKSCVILIFRGIRNGAAD-----DVDFDFIGGLKSKVFMTISTLITASARH 202
           +W+AEFG  LKSCVI+ FR     ++      + D +F+ GLK++V  TIS L+ AS+RH
Sbjct: 122 KWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGESDAEFVTGLKTRVVWTISALMAASSRH 181

Query: 203 HVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPS 262
           +++ EVV+EH E+ESLV+RD+  EG VVM + GL+ELR        E    +  R+ VPS
Sbjct: 182 YLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKNKRSVVPS 241

Query: 263 TTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVE-KDDADVALRAFEGDD 322
             + MRH   ++L+ G+ +E ATLV+VRP+G         AD E  DDA++A  AF GD 
Sbjct: 242 VRMSMRHAPSLKLKSGICLESATLVIVRPSG---------ADFEVGDDAELATEAFVGDC 301

Query: 323 VYREAVEALLKKGKKYQLEMNSF 338
           +Y EAV ALL K KK  LEMNSF
Sbjct: 302 MYGEAVVALL-KCKKNALEMNSF 314

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BLAST of Cla022088 vs. Swiss-Prot
Match: FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.4e-64
Identity = 148/343 (43.15%), Postives = 212/343 (61.81%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVI---PSDSD 82
           D FD++PDP+++ I N V DVKTLIRCR+VSKRFNSL   S+SL L++D ++    SDS+
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 83  QNSFLLTFFKSVVKSFFHLISPIL--------VQSESQNSPAQILRQFRQIQRLQIEFPT 142
            +S + +FF+S+ KS   L+ PI         + + S  +PAQIL  F +I+ L++E   
Sbjct: 62  IDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVELYG 121

Query: 143 GDLKVER--VVRWRAEFGDALKSCVILIFRG--IRNGAADDV----------DFDFIGGL 202
           GD+K+E+   V+W+AEFG  LKSCVI+ FR   +   AA +           D +F+ GL
Sbjct: 122 GDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFVCGL 181

Query: 203 KSKVFMTISTLITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRV 262
           K++V  TIS L+ AS RH+++ ++V++H EME L++RD  GEG VVM+  G++E R+  V
Sbjct: 182 KTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEV 241

Query: 263 GDGGEVAEWRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAAD 322
               + +E    RT VPS  + MRH   + L+ G+ +E ATLVVVRPTG AS        
Sbjct: 242 RGDNKESERVGERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTGVAS-------- 301

Query: 323 VEKDDADVALRAFEGDD---VYREAVEALLKKGKKYQLEMNSF 338
            + +D ++   AF GD    +Y EAV ALLK+ ++  LEMNSF
Sbjct: 302 -DDNDVELVTEAFAGDGDDCMYGEAVTALLKR-RRNVLEMNSF 334

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BLAST of Cla022088 vs. Swiss-Prot
Match: FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.2e-40
Identity = 132/374 (35.29%), Postives = 188/374 (50.27%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSD----S 82
           D FD LPD L+LLIF+ V+DVK L RC  VS+RF+SLVP  +++ ++VDCVI  D    S
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 83  DQN------------------SFLLTF---FKSVVKSFFHLISPILVQSESQNS------ 142
           D+N                  SF   F   F  + K F  ++  IL    S +S      
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPF-QMLGQILGPKRSSSSFDASFS 143

Query: 143 ------------PAQILRQFRQIQRLQIEFPTGDLKVER--VVRWRAEFGDALKSCVIL- 202
                       P Q+L+ F +I+ L+IE PTG+L +E   +++WRA+FG  L +C+IL 
Sbjct: 144 AINDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILG 203

Query: 203 --------IFRGIRNGAADD-----VDFDFIGGLKSKVFMTISTLITASARHHVLAEVVE 262
                     +   N   +D       F   GGLK +V  TIS+LI ASARH++L  ++ 
Sbjct: 204 ASSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIN 263

Query: 263 EHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRMRHQ 322
           EH  ++ LVL D  G+G + M +  LEELR   +      A     RT VP+  +R+ + 
Sbjct: 264 EHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLS-----ASSASKRTLVPALNMRLWYA 323

Query: 323 GKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDADVALRAFEGDDVYREAVEAL 338
            +++L  G  ++ ATLV +RP    S SK      E  DA     AFE  + +    + L
Sbjct: 324 PELDLPDGTVLKGATLVAIRP----SESKK-----EVCDASWLSDAFE--EPFGTVAKML 379

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BLAST of Cla022088 vs. Swiss-Prot
Match: FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 86/251 (34.26%), Postives = 133/251 (52.99%), Query Frame = 1


Query: 108 SQNSPAQILRQFRQIQRLQIEFPTGDLKVER--VVRWRAEFGDALKSCVILIFRGIRNGA 167
           + +SP Q+L+ F +I+ L+IE P+G+L ++   +++WRAEFG  L++CVIL    +    
Sbjct: 147 THHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSVIPPT 206

Query: 168 ADD-------------------VDFDFIGGLKSKVFMTISTLITASARHHVLAEVVEEHL 227
             D                     F   GGLK +V  TIS+LI ASARH++L  ++ EH 
Sbjct: 207 NSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHK 266

Query: 228 EMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRMRHQGKV 287
            ++SLVL D  G+G + M ++ LEELR   +      A     RT VP+  +R+ +   +
Sbjct: 267 TLDSLVLTDVDGQGVLCMNRDQLEELRVKPLS-----ASSASKRTLVPALNMRLWYAPSL 326

Query: 288 ELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDADVALRAFEGDDVYREAVEALLKK 338
           EL  G  ++ ATLV +RP           ++ +K+  DV+  +   D+ Y  A + L+K+
Sbjct: 327 ELPDGTVLKGATLVAIRP-----------SESKKEVCDVSWVSSAFDEPYGVAAKMLVKR 380

HSP 2 Score: 73.6 bits (179), Expect = 4.8e-12
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 1


Query: 23 DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
          D FD+LPD ++LLIFN++ DVK L RC  VSKRF+SL+P  +++ ++VDCVI SD D +S
Sbjct: 23 DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVI-SDDDSSS 82

Query: 83 FL 85
           L
Sbjct: 83 LL 83

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BLAST of Cla022088 vs. Swiss-Prot
Match: FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-27
Identity = 85/257 (33.07%), Postives = 137/257 (53.31%), Query Frame = 1


Query: 108 SQNSPAQILRQFRQIQRLQIEFPTGDLKVER--VVRWRAEFGDALKSCVIL--------- 167
           + +SP Q+L+ F +I+ L+IE P+G+L ++   +++WRAEFG  L +CVIL         
Sbjct: 156 THHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVIPPN 215

Query: 168 ------------IFRGIRNGAADD----VDFDFIGGLKSKVFMTISTLITASARHHVLAE 227
                       +     +G+ D+      F   GGLK +V  TIS+LI ASARH++L  
Sbjct: 216 PMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQP 275

Query: 228 VVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRM 287
           ++ EH  ++SLVL D  G+G + M ++ LEELR   +      A     RT VP+  +R+
Sbjct: 276 IIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPL-----AASSASKRTLVPALNMRL 335

Query: 288 RHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDADVALRAFEGDDVYREAV 338
            +   +EL  G  ++ ATLV +RP           ++ +K+ +D++  +   ++ Y  A 
Sbjct: 336 WYAPTLELPDGTVLKGATLVAIRP-----------SESKKEVSDISWVSSAFEEPYETAA 395

HSP 2 Score: 70.5 bits (171), Expect = 4.0e-11
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 1


Query: 23 DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
          D FD LPD ++LL+FN + DVK L RC  VS+RF+SLVP  D++ ++VDCVI SD D +S
Sbjct: 25 DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVI-SDDDSSS 83

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BLAST of Cla022088 vs. TrEMBL
Match: A0A0A0LN04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307320 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.7e-149
Identity = 282/351 (80.34%), Postives = 310/351 (88.32%), Query Frame = 1


Query: 4   AEEQRQEQEQNSSS--------IHNND-DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSK 63
           AE+Q +EQ+QN+SS        I+ ND D F+SLPD LILLIFNSVSDVKTLIRCRAVSK
Sbjct: 2   AEQQEREQQQNASSSSSSSSPTIYTNDADAFESLPDSLILLIFNSVSDVKTLIRCRAVSK 61

Query: 64  RFNSLVPHSDSLSLKVDCVIPSDSD----QNSFLLTFFKSVVKSFFHLISPILVQSESQN 123
           RFNSLVPHSDSLSLKVDCVI SDSD    QNSFLL+FFKSV+KSF  L+SPIL+QSESQN
Sbjct: 62  RFNSLVPHSDSLSLKVDCVISSDSDSDSHQNSFLLSFFKSVLKSFLDLLSPILLQSESQN 121

Query: 124 SPAQILRQFRQIQRLQIEFPTGDLKVERVVRWRAEFGDALKSCVILIFRGIRNGAAD--- 183
           SPAQILRQFR+IQ LQIEFPT DLKVERVV+WRAEFGDALKSCVILIFR IR GA +   
Sbjct: 122 SPAQILRQFRRIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRKGAIEEDD 181

Query: 184 -DVDFDFIGGLKSKVFMTISTLITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEK 243
            D D DFIGGLKSKVFMTIST+ITASARHHVL EVVEEHLEMESL LRDRGGEG VVMEK
Sbjct: 182 VDSDLDFIGGLKSKVFMTISTVITASARHHVLGEVVEEHLEMESLALRDRGGEGVVVMEK 241

Query: 244 NGLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTG 303
            GLEELR+WR+GDGGEVAEWRRTRTRVPSTTVRMRH+G+VE+RRGMWMEDATLVVV+P+G
Sbjct: 242 KGLEELRRWRMGDGGEVAEWRRTRTRVPSTTVRMRHKGRVEVRRGMWMEDATLVVVKPSG 301

Query: 304 NASNSKSGAADVEKDDADVALRAFEGDDVYREAVEALLKKGKKYQLEMNSF 338
           N    KSG  +V+K+DA+VA+RAFEGDDVYREAVEALL+KGK+YQLEMNSF
Sbjct: 302 N--GRKSGDGEVDKEDAEVAVRAFEGDDVYREAVEALLRKGKRYQLEMNSF 350

[Close]

BLAST of Cla022088 vs. TrEMBL
Match: A0A067KYY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15769 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 180/325 (55.38%), Postives = 224/325 (68.92%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
           DGFD LPD LILLIFNSVSD+KTLIRC +VSKRFNSLVP ++SL L+VD VI  D D +S
Sbjct: 2   DGFDRLPDSLILLIFNSVSDIKTLIRCLSVSKRFNSLVPQTESLFLRVDRVISPDLDTDS 61

Query: 83  FLLTFFKSVVKSFFHLIS----PILVQSESQNSPAQILRQFRQIQRLQIEFPTGDLKVER 142
            L  FFKS++KS   L +    P    + +QNSPAQIL +F +I+ LQIE P GDLK+++
Sbjct: 62  ILFAFFKSLLKSIHDLFNCDQKPTATLTLTQNSPAQILCRFDRIRALQIELPAGDLKLDK 121

Query: 143 --VVRWRAEFGDALKSCVILIFRGIRNGAADD---VDFDFIGGLKSKVFMTISTLITASA 202
             V++WRA+FG  LKSCVIL FR     + DD   VDFD   GLK++V  TIS LI ASA
Sbjct: 122 GVVIKWRADFGKTLKSCVILGFRTAAANSDDDSADVDFDVAEGLKARVVWTISALIAASA 181

Query: 203 RHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRV 262
           RH++L EVV+EH EME LVL+D+ GEG VVM+K GL E R        +  EW  +RT V
Sbjct: 182 RHYLLKEVVKEHKEMERLVLKDKEGEGKVVMDKEGLRECRMETTAPESDEWEWEASRTMV 241

Query: 263 PSTTVRMRHQGKVELRRGMWMEDATLVVVRPT-GNASNSKSGAADVEKDDADVALRAFEG 322
           PS  +RMRH+ +V+L  G W+E ATLVVVRP+ G   + +S  A  + +DA++A  AF G
Sbjct: 242 PSVRMRMRHKRRVQLNNGSWVEGATLVVVRPSVGKDGDGRSEVAAADVEDAELATTAF-G 301

Query: 323 DDVYREAVEALLKKGKKYQLEMNSF 338
             VY EAV+ LL K K Y LEMNSF
Sbjct: 302 GGVYGEAVQLLL-KSKGYLLEMNSF 324

[Close]

BLAST of Cla022088 vs. TrEMBL
Match: B9H746_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0005s16930g PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.6e-81
Identity = 185/322 (57.45%), Postives = 226/322 (70.19%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
           DGFD LPD LILLIFNS+SD+K LIRCR+VSKRFNSLVP ++SLSLKVDCVI  +SD +S
Sbjct: 6   DGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDSDS 65

Query: 83  FLLTFFKSVVKSFFHLISP---ILVQSESQNSPAQILRQFRQIQRLQIEFPTGDLKVER- 142
            L T FKS++KS   L  P      ++++QNSPA+IL QF +I+ LQIE P GDLK+E+ 
Sbjct: 66  -LFTLFKSLLKSIHDLFKPDPKPTARNQTQNSPARILSQFDRIRDLQIELPAGDLKLEKG 125

Query: 143 -VVRWRAEFGDALKSCVILIFRGIRN--GAADDVDFDFIGGLKSKVFMTISTLITASARH 202
            V++WRAEFG +LKSCVIL FR + N  G + D + DF GGLK++V   IS LI ASARH
Sbjct: 126 AVIKWRAEFGKSLKSCVILGFRRVANPEGNSADEEIDFTGGLKTRVVWAISALIAASARH 185

Query: 203 HVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPS 262
           ++L +VV+ H EME LVL DR GEG V MEK GL E R+     GGE  E    RT VPS
Sbjct: 186 YLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECRE--AARGGEWEE-DGGRTVVPS 245

Query: 263 TTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDADVALRAFEGDDV 322
             +RMRH+ +V+L+ G+WME  TLVVVRP        SG  D E  DA++AL AF G  +
Sbjct: 246 VRMRMRHEQRVQLKDGVWMEGVTLVVVRPC-------SGGGDGE--DAELALGAF-GGGI 305

Query: 323 YREAVEALLKKGKKYQLEMNSF 338
           Y EAV+ LL K K Y LEMNSF
Sbjct: 306 YGEAVQVLL-KNKSYLLEMNSF 312

[Close]

BLAST of Cla022088 vs. TrEMBL
Match: K4BTT0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.9e-79
Identity = 181/344 (52.62%), Postives = 230/344 (66.86%), Query Frame = 1


Query: 20  NNDDGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVI---PS 79
           +N DGFD LPDPLI L+FN +SD+KTLIRCR+VSKRFNSLVP +DSL L+VD VI    S
Sbjct: 6   DNSDGFDRLPDPLIHLMFNQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISATDS 65

Query: 80  DSDQNSFLLTFFKSVVKSFFHLISPILV---QSESQNSPAQILRQFRQIQRLQIEFPTGD 139
           D D +SFL+ F +S++KS  HL+SP  V    + SQNSPAQILR+F +I+ LQIE P+GD
Sbjct: 66  DDDDDSFLIAFLRSIIKSIHHLVSPSKVLPTPARSQNSPAQILREFERIRNLQIELPSGD 125

Query: 140 LKVER--VVRWRAEFGDALKSCVILIFRGIRNGAADDVDFDFIG----GLKSKVFMTIST 199
           L++E+   +RW+A+FG  LKSCVIL   G R+G     + +F G    GLK +V  TIS 
Sbjct: 126 LRLEKGTTIRWKADFGKTLKSCVIL---GFRSGDGGGGEAEFGGGAGAGLKMRVVWTISA 185

Query: 200 LITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAE-- 259
           LI ASARH+++ EVV EH E+E+LV++DR  EG VVM+K GL E R+ + G+G E     
Sbjct: 186 LIAASARHYMMVEVVNEHKELENLVIKDRDDEGKVVMDKKGLRECRESQ-GEGEEAEVNN 245

Query: 260 ----------WRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGA 319
                     WR  RT VP+  +RM H+ ++EL  GM M  ATLVVVRPT    N     
Sbjct: 246 ASSGNGVGLWWRNNRTTVPAVRMRMWHEARMELSGGMKMVGATLVVVRPT----NGGGER 305

Query: 320 ADVEKDDADV--ALRAFEGDDVYREAVEALLKKGKKYQLEMNSF 338
           ++VE+ + DV  AL AF  D VY EAVE LL K + Y LEMNSF
Sbjct: 306 SEVEEQNGDVGLALGAFGEDAVYCEAVERLL-KSRSYILEMNSF 340

[Close]

BLAST of Cla022088 vs. TrEMBL
Match: M1AK96_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009478 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 179/344 (52.03%), Postives = 231/344 (67.15%), Query Frame = 1


Query: 20  NNDDGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVI---PS 79
           ++ DGFD LPDPLI L+FN +SD+KTLIRCR+VSKRFNSLVP +DSL L+VD VI    S
Sbjct: 6   DHSDGFDRLPDPLIHLMFNQISDIKTLIRCRSVSKRFNSLVPQADSLLLRVDRVISATDS 65

Query: 80  DSDQNSFLLTFFKSVVKSFFHLISP---ILVQSESQNSPAQILRQFRQIQRLQIEFPTGD 139
           D D +SFL+ F +S++KS  HL+SP   +   + SQNSPAQILR+F +I+ LQIE P+GD
Sbjct: 66  DDDDDSFLIAFLRSIIKSLHHLVSPSKALPSPARSQNSPAQILREFERIRNLQIELPSGD 125

Query: 140 LKVER--VVRWRAEFGDALKSCVILIFRGIRNGAADDVDFDFIG----GLKSKVFMTIST 199
           L++E+   +RW+A+FG  LKSCVIL   G R+G     + +F G    GLK +V  TIS 
Sbjct: 126 LRLEKGTTIRWKADFGKTLKSCVIL---GFRSGDGGGGEAEFGGGAGAGLKMRVVWTISA 185

Query: 200 LITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAE-- 259
           LI ASARH+++ EVV EH E+E+LV++DR  EG VVM+K GL+E R+ + G+G E     
Sbjct: 186 LIAASARHYMMVEVVNEHKELENLVIKDRDDEGKVVMDKKGLKECRESQ-GEGEEAEVNN 245

Query: 260 ----------WRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGA 319
                     WR  RT VP+  +RM H+ ++EL  GM M  ATLVVVRPT    N     
Sbjct: 246 ASSGNGVGLWWRNNRTTVPAVRMRMWHEARMELSGGMKMVGATLVVVRPT----NGGGER 305

Query: 320 ADVEKDDADV--ALRAFEGDDVYREAVEALLKKGKKYQLEMNSF 338
           ++VE+ + DV  AL AF  D VY EAVE LL K + Y LEMNSF
Sbjct: 306 SEVEEQNGDVGLALGAFGEDAVYCEAVERLL-KSRSYILEMNSF 340

[Close]

BLAST of Cla022088 vs. NCBI nr
Match: gi|659089131|ref|XP_008445343.1| (PREDICTED: F-box protein At1g22220 [Cucumis melo])

HSP 1 Score: 545.0 bits (1403), Expect = 8.9e-152
Identity = 290/350 (82.86%), Postives = 311/350 (88.86%), Query Frame = 1


Query: 1   MAEAEEQRQEQEQNSSS--IHNND-DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFN 60
           MA+ +EQ+Q    +SSS  IH ND DGFDSLPD LILLIFNSVSDVKTLIRCRAVSKRFN
Sbjct: 1   MAQQQEQQQNASSSSSSSMIHTNDHDGFDSLPDSLILLIFNSVSDVKTLIRCRAVSKRFN 60

Query: 61  SLVPHSDSLSLKVDCVIPSDSD------QNSFLLTFFKSVVKSFFHLISPILVQSESQNS 120
           SLVPHSDSLSL VDCVI SDSD      QNSFLL+FFKSVVKSF  L+SPILVQSE+QNS
Sbjct: 61  SLVPHSDSLSLTVDCVISSDSDSDSDSDQNSFLLSFFKSVVKSFLDLLSPILVQSETQNS 120

Query: 121 PAQILRQFRQIQRLQIEFPTGDLKVERVVRWRAEFGDALKSCVILIFRGIRNGAA--DDV 180
           PAQILRQF QIQ LQIEFPT DLKVERVV+WRAEFGDALKSCVILIFR IR GA   DDV
Sbjct: 121 PAQILRQFLQIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRKGAIEEDDV 180

Query: 181 DF--DFIGGLKSKVFMTISTLITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKN 240
           D+  DFIGGLKSKVFMTISTLITASARHHVL EVVEEHLEMESLVLRDRGGEG VVMEK 
Sbjct: 181 DYNLDFIGGLKSKVFMTISTLITASARHHVLGEVVEEHLEMESLVLRDRGGEGVVVMEKK 240

Query: 241 GLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTGN 300
           GLEELR+WR+GDGGEVAEWRRTRTRVPSTTVRMRH+G+VE+RRGMWMEDATLVVVRP+GN
Sbjct: 241 GLEELRRWRMGDGGEVAEWRRTRTRVPSTTVRMRHRGRVEVRRGMWMEDATLVVVRPSGN 300

Query: 301 ASNSKSGAADVEKDDADVALRAFEGDDVYREAVEALLKKGKKYQLEMNSF 338
               KSG  DV+K+DA+VA++AFEGDDVYREAVEALLKKGK+YQLEMNSF
Sbjct: 301 C--RKSGDGDVDKEDAEVAVKAFEGDDVYREAVEALLKKGKRYQLEMNSF 348

[Close]

BLAST of Cla022088 vs. NCBI nr
Match: gi|778670222|ref|XP_004150662.2| (PREDICTED: F-box protein At1g22220 [Cucumis sativus])

HSP 1 Score: 537.0 bits (1382), Expect = 2.4e-149
Identity = 282/351 (80.34%), Postives = 310/351 (88.32%), Query Frame = 1


Query: 4   AEEQRQEQEQNSSS--------IHNND-DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSK 63
           AE+Q +EQ+QN+SS        I+ ND D F+SLPD LILLIFNSVSDVKTLIRCRAVSK
Sbjct: 2   AEQQEREQQQNASSSSSSSSPTIYTNDADAFESLPDSLILLIFNSVSDVKTLIRCRAVSK 61

Query: 64  RFNSLVPHSDSLSLKVDCVIPSDSD----QNSFLLTFFKSVVKSFFHLISPILVQSESQN 123
           RFNSLVPHSDSLSLKVDCVI SDSD    QNSFLL+FFKSV+KSF  L+SPIL+QSESQN
Sbjct: 62  RFNSLVPHSDSLSLKVDCVISSDSDSDSHQNSFLLSFFKSVLKSFLDLLSPILLQSESQN 121

Query: 124 SPAQILRQFRQIQRLQIEFPTGDLKVERVVRWRAEFGDALKSCVILIFRGIRNGAAD--- 183
           SPAQILRQFR+IQ LQIEFPT DLKVERVV+WRAEFGDALKSCVILIFR IR GA +   
Sbjct: 122 SPAQILRQFRRIQHLQIEFPTTDLKVERVVKWRAEFGDALKSCVILIFREIRKGAIEEDD 181

Query: 184 -DVDFDFIGGLKSKVFMTISTLITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEK 243
            D D DFIGGLKSKVFMTIST+ITASARHHVL EVVEEHLEMESL LRDRGGEG VVMEK
Sbjct: 182 VDSDLDFIGGLKSKVFMTISTVITASARHHVLGEVVEEHLEMESLALRDRGGEGVVVMEK 241

Query: 244 NGLEELRKWRVGDGGEVAEWRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTG 303
            GLEELR+WR+GDGGEVAEWRRTRTRVPSTTVRMRH+G+VE+RRGMWMEDATLVVV+P+G
Sbjct: 242 KGLEELRRWRMGDGGEVAEWRRTRTRVPSTTVRMRHKGRVEVRRGMWMEDATLVVVKPSG 301

Query: 304 NASNSKSGAADVEKDDADVALRAFEGDDVYREAVEALLKKGKKYQLEMNSF 338
           N    KSG  +V+K+DA+VA+RAFEGDDVYREAVEALL+KGK+YQLEMNSF
Sbjct: 302 N--GRKSGDGEVDKEDAEVAVRAFEGDDVYREAVEALLRKGKRYQLEMNSF 350

[Close]

BLAST of Cla022088 vs. NCBI nr
Match: gi|802569024|ref|XP_012067843.1| (PREDICTED: F-box protein At1g22220 [Jatropha curcas])

HSP 1 Score: 314.3 bits (804), Expect = 2.6e-82
Identity = 180/325 (55.38%), Postives = 224/325 (68.92%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
           DGFD LPD LILLIFNSVSD+KTLIRC +VSKRFNSLVP ++SL L+VD VI  D D +S
Sbjct: 2   DGFDRLPDSLILLIFNSVSDIKTLIRCLSVSKRFNSLVPQTESLFLRVDRVISPDLDTDS 61

Query: 83  FLLTFFKSVVKSFFHLIS----PILVQSESQNSPAQILRQFRQIQRLQIEFPTGDLKVER 142
            L  FFKS++KS   L +    P    + +QNSPAQIL +F +I+ LQIE P GDLK+++
Sbjct: 62  ILFAFFKSLLKSIHDLFNCDQKPTATLTLTQNSPAQILCRFDRIRALQIELPAGDLKLDK 121

Query: 143 --VVRWRAEFGDALKSCVILIFRGIRNGAADD---VDFDFIGGLKSKVFMTISTLITASA 202
             V++WRA+FG  LKSCVIL FR     + DD   VDFD   GLK++V  TIS LI ASA
Sbjct: 122 GVVIKWRADFGKTLKSCVILGFRTAAANSDDDSADVDFDVAEGLKARVVWTISALIAASA 181

Query: 203 RHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRV 262
           RH++L EVV+EH EME LVL+D+ GEG VVM+K GL E R        +  EW  +RT V
Sbjct: 182 RHYLLKEVVKEHKEMERLVLKDKEGEGKVVMDKEGLRECRMETTAPESDEWEWEASRTMV 241

Query: 263 PSTTVRMRHQGKVELRRGMWMEDATLVVVRPT-GNASNSKSGAADVEKDDADVALRAFEG 322
           PS  +RMRH+ +V+L  G W+E ATLVVVRP+ G   + +S  A  + +DA++A  AF G
Sbjct: 242 PSVRMRMRHKRRVQLNNGSWVEGATLVVVRPSVGKDGDGRSEVAAADVEDAELATTAF-G 301

Query: 323 DDVYREAVEALLKKGKKYQLEMNSF 338
             VY EAV+ LL K K Y LEMNSF
Sbjct: 302 GGVYGEAVQLLL-KSKGYLLEMNSF 324

[Close]

BLAST of Cla022088 vs. NCBI nr
Match: gi|645225641|ref|XP_008219667.1| (PREDICTED: F-box protein At1g22220 [Prunus mume])

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 188/334 (56.29%), Postives = 225/334 (67.37%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
           DGFD LPD LIL IF+SVSDVKTLIRCRAVSKRFNSLVP +DSL L VD VI SDSD +S
Sbjct: 2   DGFDRLPDSLILQIFDSVSDVKTLIRCRAVSKRFNSLVPQTDSLLLTVDRVISSDSDSDS 61

Query: 83  -------FLLTFFKSVVKSFFHLIS--PILVQSESQNSPAQILRQFRQIQRLQIEFPTGD 142
                   L+TF KS++KS   L+S  P   ++ SQNSPAQILR F  ++ L IE P+GD
Sbjct: 62  ANDDVSHLLVTFLKSILKSIHDLVSPRPDPTRARSQNSPAQILRSFHNVRNLSIELPSGD 121

Query: 143 LKVER--VVRWRAEFGDALKSCVILIFRGIRNGAADDV---DFDFIGGLKSKVFMTISTL 202
           L++E+  V++WRA+FG  L+SCVIL FR +  G    V   D DF GGLK +V  TIS L
Sbjct: 122 LRLEKGTVLKWRADFGKTLRSCVILGFRSVVAGGETPVPGDDADFAGGLKVRVVWTISAL 181

Query: 203 ITASARHHVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAE--- 262
           I ASARH++L EVV E   +E+LVLRDR GEG VVMEK GL E  +    D  E  E   
Sbjct: 182 IAASARHYLLKEVVREQRGLETLVLRDREGEGVVVMEKEGLRECGREDTCDAEEEEEEEE 241

Query: 263 --WRRTRTRVPSTTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDA 322
             W R R+RVPS  +RMRH  ++EL+ G+W+E ATLVVVRP        S + DVE  D 
Sbjct: 242 EGWDRGRSRVPSVRMRMRHVPRMELKGGVWVEGATLVVVRP--------SLSGDVE--DG 301

Query: 323 DVALRAFEGDDVYREAVEALLKKGKKYQLEMNSF 338
           D+A+ AF GD +Y E VEALL K K Y LEMNSF
Sbjct: 302 DLAMGAFGGDVLYGEVVEALL-KAKSYLLEMNSF 324

[Close]

BLAST of Cla022088 vs. NCBI nr
Match: gi|224084682|ref|XP_002307387.1| (F-box family protein [Populus trichocarpa])

HSP 1 Score: 310.5 bits (794), Expect = 3.7e-81
Identity = 185/322 (57.45%), Postives = 226/322 (70.19%), Query Frame = 1


Query: 23  DGFDSLPDPLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVIPSDSDQNS 82
           DGFD LPD LILLIFNS+SD+K LIRCR+VSKRFNSLVP ++SLSLKVDCVI  +SD +S
Sbjct: 6   DGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDSDS 65

Query: 83  FLLTFFKSVVKSFFHLISP---ILVQSESQNSPAQILRQFRQIQRLQIEFPTGDLKVER- 142
            L T FKS++KS   L  P      ++++QNSPA+IL QF +I+ LQIE P GDLK+E+ 
Sbjct: 66  -LFTLFKSLLKSIHDLFKPDPKPTARNQTQNSPARILSQFDRIRDLQIELPAGDLKLEKG 125

Query: 143 -VVRWRAEFGDALKSCVILIFRGIRN--GAADDVDFDFIGGLKSKVFMTISTLITASARH 202
            V++WRAEFG +LKSCVIL FR + N  G + D + DF GGLK++V   IS LI ASARH
Sbjct: 126 AVIKWRAEFGKSLKSCVILGFRRVANPEGNSADEEIDFTGGLKTRVVWAISALIAASARH 185

Query: 203 HVLAEVVEEHLEMESLVLRDRGGEGAVVMEKNGLEELRKWRVGDGGEVAEWRRTRTRVPS 262
           ++L +VV+ H EME LVL DR GEG V MEK GL E R+     GGE  E    RT VPS
Sbjct: 186 YLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECRE--AARGGEWEE-DGGRTVVPS 245

Query: 263 TTVRMRHQGKVELRRGMWMEDATLVVVRPTGNASNSKSGAADVEKDDADVALRAFEGDDV 322
             +RMRH+ +V+L+ G+WME  TLVVVRP        SG  D E  DA++AL AF G  +
Sbjct: 246 VRMRMRHEQRVQLKDGVWMEGVTLVVVRPC-------SGGGDGE--DAELALGAF-GGGI 305

Query: 323 YREAVEALLKKGKKYQLEMNSF 338
           Y EAV+ LL K K Y LEMNSF
Sbjct: 306 YGEAVQVLL-KNKSYLLEMNSF 312

The following BLAST results are available for this feature:

BLAST of Cla022088 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB303_ARATH	1.1e-64	45.20	F-box protein At1g22220 OS=Arabidopsis thaliana GN=At1g22220 PE=2 SV=1	[more]
FB91_ARATH	5.4e-64	43.15	F-box protein At1g78100 OS=Arabidopsis thaliana GN=At1g78100 PE=1 SV=1	[more]
FB19_ARATH	3.2e-40	35.29	F-box protein At1g30200 OS=Arabidopsis thaliana GN=At1g30200 PE=2 SV=1	[more]
FB237_ARATH	1.8e-27	34.26	F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2 SV=1	[more]
FB285_ARATH	2.4e-27	33.07	F-box protein At5g46170 OS=Arabidopsis thaliana GN=At5g46170 PE=2 SV=1	[more]

BLAST of Cla022088 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN04_CUCSA	1.7e-149	80.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307320 PE=4 SV=1	[more]
A0A067KYY1_JATCU	1.8e-82	55.38	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15769 PE=4 SV=1	[more]
B9H746_POPTR	2.6e-81	57.45	F-box family protein OS=Populus trichocarpa GN=POPTR_0005s16930g PE=4 SV=1	[more]
K4BTT0_SOLLC	1.9e-79	52.62	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
M1AK96_SOLTU	1.2e-78	52.03	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009478 PE=4 SV=1	[more]

BLAST of Cla022088 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089131\|ref\|XP_008445343.1\|	8.9e-152	82.86	PREDICTED: F-box protein At1g22220 [Cucumis melo]	[more]
gi\|778670222\|ref\|XP_004150662.2\|	2.4e-149	80.34	PREDICTED: F-box protein At1g22220 [Cucumis sativus]	[more]
gi\|802569024\|ref\|XP_012067843.1\|	2.6e-82	55.38	PREDICTED: F-box protein At1g22220 [Jatropha curcas]	[more]
gi\|645225641\|ref\|XP_008219667.1\|	1.3e-81	56.29	PREDICTED: F-box protein At1g22220 [Prunus mume]	[more]
gi\|224084682\|ref\|XP_002307387.1\|	3.7e-81	57.45	F-box family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009914	hormone transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022088	Cla022088.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 26..61 score: 7.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 19..71 score: 6.0
None	No IPR available	unknown	Coil	Coil	coord: 1..21 scor
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 21..60 score: 1.
None	No IPR available	PANTHER	PTHR31215	FAMILY NOT NAMED	coord: 23..337 score: 1.2E
None	No IPR available	PANTHER	PTHR31215:SF6	SUBFAMILY NOT NAMED	coord: 23..337 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla022088	Cla97C08G153970	Watermelon (97103) v2	wmwmbB100
Cla022088	Csa2G307320	Cucumber (Chinese Long) v2	cuwmB113
Cla022088	MELO3C011360	Melon (DHL92) v3.5.1	mewmB301
Cla022088	ClCG08G011030	Watermelon (Charleston Gray)	wcgwmB400
Cla022088	CSPI02G15820	Wild cucumber (PI 183967)	cpiwmB118
Cla022088	Cucsa.154470	Cucumber (Gy14) v1	cgywmB273
Cla022088	CmaCh05G004930	Cucurbita maxima (Rimu)	cmawmB751
Cla022088	CmaCh12G001510	Cucurbita maxima (Rimu)	cmawmB149
Cla022088	CmoCh05G005160	Cucurbita moschata (Rifu)	cmowmB746
Cla022088	Lsi08G009570	Bottle gourd (USVL1VR-Ls)	lsiwmB465
Cla022088	Cp4.1LG11g04330	Cucurbita pepo (Zucchini)	cpewmB099
Cla022088	Cp4.1LG07g01260	Cucurbita pepo (Zucchini)	cpewmB783
Cla022088	CsGy2G016420	Cucumber (Gy14) v2	cgybwmB110
Cla022088	MELO3C011360.2	Melon (DHL92) v3.6.1	medwmB296
Cla022088	Carg20546	Silver-seed gourd	carwmB0649
Cla022088	CsaV3_1G022880	Cucumber (Chinese Long) v3	cucwmB012
Cla022088	Bhi04G000617	Wax gourd	wgowmB299

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla022088	Watermelon (97103) v2	wmwmbB080
Cla022088	Wax gourd	wgowmB416
Cla022088	Watermelon (97103) v1	wmwmB068
Cla022088	Cucumber (Gy14) v1	cgywmB134
Cla022088	Cucurbita moschata (Rifu)	cmowmB135
Cla022088	Cucurbita moschata (Rifu)	cmowmB609
Cla022088	Wild cucumber (PI 183967)	cpiwmB487
Cla022088	Melon (DHL92) v3.5.1	mewmB560
Cla022088	Watermelon (Charleston Gray)	wcgwmB122
Cla022088	Cucumber (Chinese Long) v2	cuwmB472
Cla022088	Bottle gourd (USVL1VR-Ls)	lsiwmB131
Cla022088	Cucumber (Gy14) v2	cgybwmB443
Cla022088	Melon (DHL92) v3.6.1	medwmB547
Cla022088	Cucumber (Chinese Long) v3	cucwmB498