Carg20546 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20546
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein
Location	Cucurbita_argyrosperma_scaffold_113 : 192224 .. 193249 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGGGCAGGATTCTTCGTTAATCCACATCGATGATGCCTTTGATTCTCTTCCAGATTCCATAATTCTTCTGATTTTCAACTCCGTTTCCGATGTCAAAACCTTGATCCGTTGCAGAGCCGTCTCGAAGCGATTCAACTCCCTCGTTCCTCATTCCGATTCTCTCTTTCTCAAGGTCGATTGCGTCATTTCTTCGGATTCTGATTCCGATGAAAACTCGTTCCTCTACGGATTTTTCAAGTCCGTTGTGAAATCGTTCTTCGATTTGATTTCTCCTATCCTCGTTCAGTCCGAATCGCAGAACTCTCCGGCGCAAATCCTCCGTCAGTTTATCCGGATCCAGCGTTTAGAGATCGAGTTTCCGACGGGAGATCTTAAGGTTGAGAGAATCGGAGGCGTTAAATGGAGAGCGGAGTTTGGGATTACGCTTAGGAGTTGCGTGATTTTGCTATTTCGAGGGATTAGGTATGAGTCGTATGATGAGACGGCTGTGGCGGATGGTTTCGATTTCATCGAAGAACTGAAATCGAAGGTGTTTTTGACGATTAGTACTCTGATTACGGCATCGGCGAGGCACCACGTGTTGGCGGAGGTGATCGAGGAGCATTTGGAGGTGGAGAGTCTTGTTTTGCGAGACAGGGAAGGGGAAGGCGTGGTGGAGATGGACAAGGACGGTTTAGATGAGTGGAGGAAATCGAGAGACCGTAGCGGCGAAGACGGCGGCGGAGTAGCGGCGGAGGGAGGGGAATGGCGACGGACAAGAACGAGGGTTCCGAGCACTACGGTGAGGATGAGACATCTGCCGAGGGTGGAGCTCCGGCGAGGGATGTGGATGGAGGACGCCACGTTGGTGGTGGTGAGGCCAACCACAAATGCCAGCAAGGATAAGACTGATGACATGGAGAAAGAGAATGATGAGGTGGCATTCAGGACGTTCGAAGGTGATGATGTGTACGGTGAGGCAGTGGGAGCGTTACTGAAGAAGGGCCGGAGGTATCAGTTAGAAATGAACTCTTTCTAG

mRNA sequence

ATGGCGGAAGGGCAGGATTCTTCGTTAATCCACATCGATGATGCCTTTGATTCTCTTCCAGATTCCATAATTCTTCTGATTTTCAACTCCGTTTCCGATGTCAAAACCTTGATCCGTTGCAGAGCCGTCTCGAAGCGATTCAACTCCCTCGTTCCTCATTCCGATTCTCTCTTTCTCAAGGTCGATTGCGTCATTTCTTCGGATTCTGATTCCGATGAAAACTCGTTCCTCTACGGATTTTTCAAGTCCGTTGTGAAATCGTTCTTCGATTTGATTTCTCCTATCCTCGTTCAGTCCGAATCGCAGAACTCTCCGGCGCAAATCCTCCGTCAGTTTATCCGGATCCAGCGTTTAGAGATCGAGTTTCCGACGGGAGATCTTAAGGTTGAGAGAATCGGAGGCGTTAAATGGAGAGCGGAGTTTGGGATTACGCTTAGGAGTTGCGTGATTTTGCTATTTCGAGGGATTAGGTATGAGTCGTATGATGAGACGGCTGTGGCGGATGGTTTCGATTTCATCGAAGAACTGAAATCGAAGGTGTTTTTGACGATTAGTACTCTGATTACGGCATCGGCGAGGCACCACGTGTTGGCGGAGGTGATCGAGGAGCATTTGGAGGTGGAGAGTCTTGTTTTGCGAGACAGGGAAGGGGAAGGCGTGGTGGAGATGGACAAGGACGGTTTAGATGAGTGGAGGAAATCGAGAGACCGTAGCGGCGAAGACGGCGGCGGAGTAGCGGCGGAGGGAGGGGAATGGCGACGGACAAGAACGAGGGTTCCGAGCACTACGGTGAGGATGAGACATCTGCCGAGGGTGGAGCTCCGGCGAGGGATGTGGATGGAGGACGCCACGTTGGTGGTGGTGAGGCCAACCACAAATGCCAGCAAGGATAAGACTGATGACATGGAGAAAGAGAATGATGAGGTGGCATTCAGGACGTTCGAAGGTGATGATGTGTACGGTGAGGCAGTGGGAGCGTTACTGAAGAAGGGCCGGAGGTATCAGTTAGAAATGAACTCTTTCTAG

Coding sequence (CDS)

ATGGCGGAAGGGCAGGATTCTTCGTTAATCCACATCGATGATGCCTTTGATTCTCTTCCAGATTCCATAATTCTTCTGATTTTCAACTCCGTTTCCGATGTCAAAACCTTGATCCGTTGCAGAGCCGTCTCGAAGCGATTCAACTCCCTCGTTCCTCATTCCGATTCTCTCTTTCTCAAGGTCGATTGCGTCATTTCTTCGGATTCTGATTCCGATGAAAACTCGTTCCTCTACGGATTTTTCAAGTCCGTTGTGAAATCGTTCTTCGATTTGATTTCTCCTATCCTCGTTCAGTCCGAATCGCAGAACTCTCCGGCGCAAATCCTCCGTCAGTTTATCCGGATCCAGCGTTTAGAGATCGAGTTTCCGACGGGAGATCTTAAGGTTGAGAGAATCGGAGGCGTTAAATGGAGAGCGGAGTTTGGGATTACGCTTAGGAGTTGCGTGATTTTGCTATTTCGAGGGATTAGGTATGAGTCGTATGATGAGACGGCTGTGGCGGATGGTTTCGATTTCATCGAAGAACTGAAATCGAAGGTGTTTTTGACGATTAGTACTCTGATTACGGCATCGGCGAGGCACCACGTGTTGGCGGAGGTGATCGAGGAGCATTTGGAGGTGGAGAGTCTTGTTTTGCGAGACAGGGAAGGGGAAGGCGTGGTGGAGATGGACAAGGACGGTTTAGATGAGTGGAGGAAATCGAGAGACCGTAGCGGCGAAGACGGCGGCGGAGTAGCGGCGGAGGGAGGGGAATGGCGACGGACAAGAACGAGGGTTCCGAGCACTACGGTGAGGATGAGACATCTGCCGAGGGTGGAGCTCCGGCGAGGGATGTGGATGGAGGACGCCACGTTGGTGGTGGTGAGGCCAACCACAAATGCCAGCAAGGATAAGACTGATGACATGGAGAAAGAGAATGATGAGGTGGCATTCAGGACGTTCGAAGGTGATGATGTGTACGGTGAGGCAGTGGGAGCGTTACTGAAGAAGGGCCGGAGGTATCAGTTAGAAATGAACTCTTTCTAG

Protein sequence

MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF

Homology

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BLAST of Carg20546 vs. NCBI nr
Match: XP_022951596.1 (F-box protein At1g22220-like [Cucurbita moschata])

HSP 1 Score: 657.1 bits (1694), Expect = 3.2e-185
Identity = 338/341 (99.12%), Postives = 339/341 (99.41%), Query Frame = 0


Query: 1   MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK 60
           MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK
Sbjct: 1   MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK 60

Query: 61  VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI 120
           VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI
Sbjct: 61  VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI 120

Query: 121 EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV 180
           EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV
Sbjct: 121 EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV 180

Query: 181 FLTISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGE 240
           FLTISTLITASARHHVLAEVIEEHLEV+SLVLRDREGEGVVEMDKDGLDEWRKSRDRSGE
Sbjct: 181 FLTISTLITASARHHVLAEVIEEHLEVDSLVLRDREGEGVVEMDKDGLDEWRKSRDRSGE 240

Query: 241 DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD 300
           DGGGVA EGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD
Sbjct: 241 DGGGVAGEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD 300

Query: 301 DMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           DMEKENDEVA RTFEGDDVYGEAVGALLKKGRRYQLEMNSF
Sbjct: 301 DMEKENDEVALRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 341

[Close]

BLAST of Carg20546 vs. NCBI nr
Match: XP_023537288.1 (F-box protein At1g22220-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 655.6 bits (1690), Expect = 9.2e-185
Identity = 338/341 (99.12%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK 60
           MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK
Sbjct: 1   MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK 60

Query: 61  VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI 120
           VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI
Sbjct: 61  VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI 120

Query: 121 EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV 180
           EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV
Sbjct: 121 EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV 180

Query: 181 FLTISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGE 240
           FLTISTLITASARH+VLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSR+RSGE
Sbjct: 181 FLTISTLITASARHNVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRERSGE 240

Query: 241 DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD 300
           DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD
Sbjct: 241 DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD 300

Query: 301 DMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           DMEKENDEVA RTFEGDDVYGEAVGALLKKGRRYQLEMNSF
Sbjct: 301 DMEKENDEVALRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 341

[Close]

BLAST of Carg20546 vs. NCBI nr
Match: XP_023002829.1 (F-box protein At1g78100-like [Cucurbita maxima])

HSP 1 Score: 653.7 bits (1685), Expect = 3.5e-184
Identity = 335/341 (98.24%), Postives = 340/341 (99.71%), Query Frame = 0


Query: 1   MAEGQDSSLIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK 60
           MAEGQDSSLIHIDDAFDSLPDSIIL+IFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK
Sbjct: 1   MAEGQDSSLIHIDDAFDSLPDSIILMIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLK 60

Query: 61  VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI 120
           VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI
Sbjct: 61  VDCVISSDSDSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEI 120

Query: 121 EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV 180
           EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV
Sbjct: 121 EFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKV 180

Query: 181 FLTISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGE 240
           FLTISTLITASARHHVLAE+IEEHLE+ESLVLRDREGEGVVEMDKDGLDEWRKSR+RSGE
Sbjct: 181 FLTISTLITASARHHVLAELIEEHLEMESLVLRDREGEGVVEMDKDGLDEWRKSRERSGE 240

Query: 241 DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTD 300
           DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMW+EDATLVVVRPTTNASKDKTD
Sbjct: 241 DGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWIEDATLVVVRPTTNASKDKTD 300

Query: 301 DMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           DMEKENDEVA RTFEGDDVYGEAVGALLKKGRRYQLEMNSF
Sbjct: 301 DMEKENDEVALRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 341

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BLAST of Carg20546 vs. NCBI nr
Match: XP_004150662.2 (PREDICTED: F-box protein At1g22220 [Cucumis sativus] >KGN62167.1 hypothetical protein Csa_2G307320 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 1.5e-110
Identity = 233/330 (70.61%), Postives = 258/330 (78.18%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDS--DS 73
           DAF+SLPDS+ILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSL LKVDCVISSDS    
Sbjct: 30  DAFESLPDSLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVISSDSXXXX 89

Query: 74  DENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKVER 133
                             DL+SPIL+QSESQNSPAQILRQF RIQ L+IEFPT DLKVER
Sbjct: 90  XXXXXXXXXXXXXXXXXXDLLSPILLQSESQNSPAQILRQFRRIQHLQIEFPTTDLKVER 149

Query: 134 IGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLITAS 193
           +  VKWRAEFG  L+SCVIL+FR IR  + +E  V    DFI  LKSKVF+TIST+ITAS
Sbjct: 150 V--VKWRAEFGDALKSCVILIFREIRKGAIEEDDVDSDLDFIGGLKSKVFMTISTVITAS 209

Query: 194 ARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGE 253
           ARHHVL EV+EEHLE+ESL LRDR GEGVV M+K GL+E R  R R G DGG VA    E
Sbjct: 210 ARHHVLGEVVEEHLEMESLALRDRGGEGVVVMEKKGLEELR--RWRMG-DGGEVA----E 269

Query: 254 WRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAF 313
           WRRTRTRVPSTTVRMRH  RVE+RRGMWMEDATLVVV+P+ N  K    +++KE+ EVA 
Sbjct: 270 WRRTRTRVPSTTVRMRHKGRVEVRRGMWMEDATLVVVKPSGNGRKSGDGEVDKEDAEVAV 329

Query: 314 RTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           R FEGDDVY EAV ALL+KG+RYQLEMNSF
Sbjct: 330 RAFEGDDVYREAVEALLRKGKRYQLEMNSF 350

[Close]

BLAST of Carg20546 vs. NCBI nr
Match: XP_008445343.1 (PREDICTED: F-box protein At1g22220 [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 3.7e-109
Identity = 232/332 (69.88%), Postives = 255/332 (76.81%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVIS----SDS 73
           D FDSLPDS+ILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSL L VDCVIS       
Sbjct: 26  DGFDSLPDSLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLTVDCVISXXXXXXX 85

Query: 74  DSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKV 133
                               DL+SPILVQSE+QNSPAQILRQF++IQ L+IEFPT DLKV
Sbjct: 86  XXXXXXXXXXXXXXXXXXXXDLLSPILVQSETQNSPAQILRQFLQIQHLQIEFPTTDLKV 145

Query: 134 ERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLIT 193
           ER+  VKWRAEFG  L+SCVIL+FR IR  + +E  V    DFI  LKSKVF+TISTLIT
Sbjct: 146 ERV--VKWRAEFGDALKSCVILIFREIRKGAIEEDDVDYNLDFIGGLKSKVFMTISTLIT 205

Query: 194 ASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEG 253
           ASARHHVL EV+EEHLE+ESLVLRDR GEGVV M+K GL+E R  R R G DGG VA   
Sbjct: 206 ASARHHVLGEVVEEHLEMESLVLRDRGGEGVVVMEKKGLEELR--RWRMG-DGGEVA--- 265

Query: 254 GEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEV 313
            EWRRTRTRVPSTTVRMRH  RVE+RRGMWMEDATLVVVRP+ N  K    D++KE+ EV
Sbjct: 266 -EWRRTRTRVPSTTVRMRHRGRVEVRRGMWMEDATLVVVRPSGNCRKSGDGDVDKEDAEV 325

Query: 314 AFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           A + FEGDDVY EAV ALLKKG+RYQLEMNSF
Sbjct: 326 AVKAFEGDDVYREAVEALLKKGKRYQLEMNSF 348

[Close]

BLAST of Carg20546 vs. TAIR10
Match: AT1G78100.1 (F-box family protein)

HSP 1 Score: 243.8 bits (621), Expect = 1.5e-64
Identity = 153/345 (44.35%), Postives = 215/345 (62.32%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVI-SSDSDSD 73
           DAFD++PD +++ I N V DVKTLIRCR+VSKRFNSL   S+SL L++D ++ +++SDS+
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 74  ENSFLYGFFKSVVKSFFDLISPIL--------VQSESQNSPAQILRQFIRIQRLEIEFPT 133
            +S +  FF+S+ KS   L+ PI         + + S  +PAQIL  F RI+ LE+E   
Sbjct: 62  IDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVELYG 121

Query: 134 GDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDET---AVADGF-----DFIEEL 193
           GD+K+E+   VKW+AEFG TL+SCVI+ FR     +   T   AV DG      +F+  L
Sbjct: 122 GDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFVCGL 181

Query: 194 KSKVFLTISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRD 253
           K++V  TIS L+ AS RH+++ +++++H E+E L++RD +GEG V MD  G+ E+R++  
Sbjct: 182 KTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEV 241

Query: 254 RSGEDGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASK 313
           R          E       RT VPS  + MRH P + L+ G+ +E ATLVVVRPT  AS 
Sbjct: 242 RGDNKESERVGE-------RTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTGVASD 301

Query: 314 DKTDDMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           D   ++  E    AF     D +YGEAV ALLK+ RR  LEMNSF
Sbjct: 302 DNDVELVTE----AFAGDGDDCMYGEAVTALLKR-RRNVLEMNSF 334

[Close]

BLAST of Carg20546 vs. TAIR10
Match: AT1G22220.1 (F-box family protein)

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-61
Identity = 145/333 (43.54%), Postives = 207/333 (62.16%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDSDSDE 73
           D FD LPD II+ I N V DVKTL+RC ++SKRFNSLVP S+SL L++D  +S      +
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVS------D 61

Query: 74  NSFLYGFFKSVVKSFFDLIS----PILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKV 133
           +  +   F+S+      L+S    PI + + S + P +IL +F RI+ L++E P GD+K+
Sbjct: 62  SPVVTSIFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLDVELPGGDVKL 121

Query: 134 ERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADG-FDFIEELKSKVFLTISTLI 193
           E+   VKW+AEFG TL+SCVI+ FR     S       +   +F+  LK++V  TIS L+
Sbjct: 122 EKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGESDAEFVTGLKTRVVWTISALM 181

Query: 194 TASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAE 253
            AS+RH+++ EV++EH E+ESLV+RD+E EG V M+++GL E R +  R       V  E
Sbjct: 182 AASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEAR-------VEDE 241

Query: 254 GGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDE 313
               +  R+ VPS  + MRH P ++L+ G+ +E ATLV+VRP + A  +  DD      E
Sbjct: 242 ERVVKNKRSVVPSVRMSMRHAPSLKLKSGICLESATLVIVRP-SGADFEVGDDA-----E 301

Query: 314 VAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           +A   F GD +YGEAV ALL K ++  LEMNSF
Sbjct: 302 LATEAFVGDCMYGEAVVALL-KCKKNALEMNSF 314

[Close]

BLAST of Carg20546 vs. TAIR10
Match: AT4G18380.1 (F-box family protein)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-45
Identity = 134/380 (35.26%), Postives = 197/380 (51.84%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSD----- 73
           D FD+LPDSI+LLIFN++ DVK L RC  VSKRF+SL+P  +++F++VDCVIS D     
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 74  -SDSDENSFLYGFFKSVVKSFFDLI---------------------SPILVQ-------- 133
            SD   ++     F ++ +  F  +                     S +L+         
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 134 --SESQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGI 193
               + +SP Q+L+ F  I+ L+IE P+G+L ++    +KWRAEFG TL +CVIL    +
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSV 202

Query: 194 ---------RYESYDETAVADGFDFIEE------LKSKVFLTISTLITASARHHVLAEVI 253
                       S    AV D     E       LK +V  TIS+LI ASARH++L  +I
Sbjct: 203 IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPII 262

Query: 254 EEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGEWRRTRTRVPS 313
            EH  ++SLVL D +G+GV+ M++D L+E R            V          RT VP+
Sbjct: 263 AEHKTLDSLVLTDVDGQGVLCMNRDQLEELR------------VKPLSASSASKRTLVPA 322

Query: 314 TTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAFRTFEGDDVYG 342
             +R+ + P +EL  G  ++ ATLV +RP+         + +KE  +V++ +   D+ YG
Sbjct: 323 LNMRLWYAPSLELPDGTVLKGATLVAIRPS---------ESKKEVCDVSWVSSAFDEPYG 380

[Close]

BLAST of Carg20546 vs. TAIR10
Match: AT5G46170.1 (F-box family protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41
Identity = 127/393 (32.32%), Postives = 191/393 (48.60%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDSDSDE 73
           D FD LPDSI+LL+FN + DVK L RC  VS+RF+SLVP  D++ ++VDCVIS D  S  
Sbjct: 25  DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSSL 84

Query: 74  NSF------LYGFFKSVVKSFF-DLISPILVQSE-------------------------- 133
           +S         G F ++ +     ++ P+    +                          
Sbjct: 85  SSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRXXXXXXXXXXXXXXXXXXXX 144

Query: 134 -----------SQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCV 193
                      + +SP Q+L+ F  I+ L IE P+G+L ++    +KWRAEFG TL +CV
Sbjct: 145 XXXXXIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCV 204

Query: 194 IL---------------------LFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLI 253
           IL                     +       S D  ++ + F     LK +V  TIS+LI
Sbjct: 205 ILGASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLI 264

Query: 254 TASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAE 313
            ASARH++L  +I EH  ++SLVL D +G+GV+ M++D L+E R            V   
Sbjct: 265 AASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELR------------VKPL 324

Query: 314 GGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDE 342
                  RT VP+  +R+ + P +EL  G  ++ ATLV +RP+         + +KE  +
Sbjct: 325 AASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPS---------ESKKEVSD 384

[Close]

BLAST of Carg20546 vs. TAIR10
Match: AT1G30200.2 (F-box family protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-40
Identity = 130/378 (34.39%), Postives = 196/378 (51.85%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSD--SDS 73
           D FD LPDS++LLIF+ V+DVK L RC  VS+RF+SLVP  +++ ++VDCVIS D  S S
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 74  DEN------------------SFLYGFF-------------------KSVVKSFFDLISP 133
           DEN                  SF   F                    K    SF    S 
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFXXXXXXXXXXXXXXXXXXXPKRSSSSFDASFSA 143

Query: 134 ILVQ-SESQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCVIL-- 193
           I  +   + +SP Q+L+ F  I+ L+IE PTG+L +E    +KWRA+FG TL +C+IL  
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGA 203

Query: 194 --LFRGIRYESYDETAVADGFDFIEE------LKSKVFLTISTLITASARHHVLAEVIEE 253
             + +    ++++ +   D  +  E       LK +V  TIS+LI ASARH++L  +I E
Sbjct: 204 SSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINE 263

Query: 254 HLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGEWRRTRTRVPSTT 313
           H  ++ LVL D +G+GV+ M+++ L+E R            V          RT VP+  
Sbjct: 264 HKSLDRLVLSDADGQGVLCMNREQLEELR------------VTPLSASSASKRTLVPALN 323

Query: 314 VRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAFRTFEGDDVYGEA 342
           +R+ + P ++L  G  ++ ATLV +RP+         + +KE  + ++ +   ++ +G  
Sbjct: 324 MRLWYAPELDLPDGTVLKGATLVAIRPS---------ESKKEVCDASWLSDAFEEPFG-T 379

[Close]

BLAST of Carg20546 vs. Swiss-Prot
Match: sp|Q9C9S2|FB91_ARATH (F-box protein At1g78100 OS=Arabidopsis thaliana OX=3702 GN=At1g78100 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.7e-63
Identity = 153/345 (44.35%), Postives = 215/345 (62.32%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVI-SSDSDSD 73
           DAFD++PD +++ I N V DVKTLIRCR+VSKRFNSL   S+SL L++D ++ +++SDS+
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 74  ENSFLYGFFKSVVKSFFDLISPIL--------VQSESQNSPAQILRQFIRIQRLEIEFPT 133
            +S +  FF+S+ KS   L+ PI         + + S  +PAQIL  F RI+ LE+E   
Sbjct: 62  IDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVELYG 121

Query: 134 GDLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDET---AVADGF-----DFIEEL 193
           GD+K+E+   VKW+AEFG TL+SCVI+ FR     +   T   AV DG      +F+  L
Sbjct: 122 GDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFVCGL 181

Query: 194 KSKVFLTISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRD 253
           K++V  TIS L+ AS RH+++ +++++H E+E L++RD +GEG V MD  G+ E+R++  
Sbjct: 182 KTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEV 241

Query: 254 RSGEDGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASK 313
           R          E       RT VPS  + MRH P + L+ G+ +E ATLVVVRPT  AS 
Sbjct: 242 RGDNKESERVGE-------RTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPTGVASD 301

Query: 314 DKTDDMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           D   ++  E    AF     D +YGEAV ALLK+ RR  LEMNSF
Sbjct: 302 DNDVELVTE----AFAGDGDDCMYGEAVTALLKR-RRNVLEMNSF 334

[Close]

BLAST of Carg20546 vs. Swiss-Prot
Match: sp|Q9LM18|FB303_ARATH (F-box protein At1g22220 OS=Arabidopsis thaliana OX=3702 GN=At1g22220 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.3e-60
Identity = 145/333 (43.54%), Postives = 207/333 (62.16%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDSDSDE 73
           D FD LPD II+ I N V DVKTL+RC ++SKRFNSLVP S+SL L++D  +S      +
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVS------D 61

Query: 74  NSFLYGFFKSVVKSFFDLIS----PILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKV 133
           +  +   F+S+      L+S    PI + + S + P +IL +F RI+ L++E P GD+K+
Sbjct: 62  SPVVTSIFRSLFNGLVSLLSKPAKPITITTLSPSLPFKILSRFDRIRNLDVELPGGDVKL 121

Query: 134 ERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADG-FDFIEELKSKVFLTISTLI 193
           E+   VKW+AEFG TL+SCVI+ FR     S       +   +F+  LK++V  TIS L+
Sbjct: 122 EKGAAVKWKAEFGKTLKSCVIVAFRSAGTVSSPVAVEGESDAEFVTGLKTRVVWTISALM 181

Query: 194 TASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAE 253
            AS+RH+++ EV++EH E+ESLV+RD+E EG V M+++GL E R +  R       V  E
Sbjct: 182 AASSRHYLMREVVKEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEAR-------VEDE 241

Query: 254 GGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDE 313
               +  R+ VPS  + MRH P ++L+ G+ +E ATLV+VRP + A  +  DD      E
Sbjct: 242 ERVVKNKRSVVPSVRMSMRHAPSLKLKSGICLESATLVIVRP-SGADFEVGDDA-----E 301

Query: 314 VAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           +A   F GD +YGEAV ALL K ++  LEMNSF
Sbjct: 302 LATEAFVGDCMYGEAVVALL-KCKKNALEMNSF 314

[Close]

BLAST of Carg20546 vs. Swiss-Prot
Match: sp|O49508|FB237_ARATH (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.9e-44
Identity = 134/380 (35.26%), Postives = 197/380 (51.84%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSD----- 73
           D FD+LPDSI+LLIFN++ DVK L RC  VSKRF+SL+P  +++F++VDCVIS D     
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 74  -SDSDENSFLYGFFKSVVKSFFDLI---------------------SPILVQ-------- 133
            SD   ++     F ++ +  F  +                     S +L+         
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 134 --SESQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCVILLFRGI 193
               + +SP Q+L+ F  I+ L+IE P+G+L ++    +KWRAEFG TL +CVIL    +
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSV 202

Query: 194 ---------RYESYDETAVADGFDFIEE------LKSKVFLTISTLITASARHHVLAEVI 253
                       S    AV D     E       LK +V  TIS+LI ASARH++L  +I
Sbjct: 203 IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPII 262

Query: 254 EEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGEWRRTRTRVPS 313
            EH  ++SLVL D +G+GV+ M++D L+E R            V          RT VP+
Sbjct: 263 AEHKTLDSLVLTDVDGQGVLCMNRDQLEELR------------VKPLSASSASKRTLVPA 322

Query: 314 TTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAFRTFEGDDVYG 342
             +R+ + P +EL  G  ++ ATLV +RP+         + +KE  +V++ +   D+ YG
Sbjct: 323 LNMRLWYAPSLELPDGTVLKGATLVAIRPS---------ESKKEVCDVSWVSSAFDEPYG 380

[Close]

BLAST of Carg20546 vs. Swiss-Prot
Match: sp|Q9FNK5|FB285_ARATH (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-40
Identity = 127/393 (32.32%), Postives = 191/393 (48.60%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDSDSDE 73
           D FD LPDSI+LL+FN + DVK L RC  VS+RF+SLVP  D++ ++VDCVIS D  S  
Sbjct: 25  DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSSL 84

Query: 74  NSF------LYGFFKSVVKSFF-DLISPILVQSE-------------------------- 133
           +S         G F ++ +     ++ P+    +                          
Sbjct: 85  SSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRXXXXXXXXXXXXXXXXXXXX 144

Query: 134 -----------SQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCV 193
                      + +SP Q+L+ F  I+ L IE P+G+L ++    +KWRAEFG TL +CV
Sbjct: 145 XXXXXIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCV 204

Query: 194 IL---------------------LFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLI 253
           IL                     +       S D  ++ + F     LK +V  TIS+LI
Sbjct: 205 ILGASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLI 264

Query: 254 TASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAE 313
            ASARH++L  +I EH  ++SLVL D +G+GV+ M++D L+E R            V   
Sbjct: 265 AASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELR------------VKPL 324

Query: 314 GGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDE 342
                  RT VP+  +R+ + P +EL  G  ++ ATLV +RP+         + +KE  +
Sbjct: 325 AASSASKRTLVPALNMRLWYAPTLELPDGTVLKGATLVAIRPS---------ESKKEVSD 384

[Close]

BLAST of Carg20546 vs. Swiss-Prot
Match: sp|Q9C534|FB19_ARATH (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-39
Identity = 130/378 (34.39%), Postives = 196/378 (51.85%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSD--SDS 73
           D FD LPDS++LLIF+ V+DVK L RC  VS+RF+SLVP  +++ ++VDCVIS D  S S
Sbjct: 24  DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83

Query: 74  DEN------------------SFLYGFF-------------------KSVVKSFFDLISP 133
           DEN                  SF   F                    K    SF    S 
Sbjct: 84  DENHRFSLNTASISDAGGAGGSFSALFXXXXXXXXXXXXXXXXXXXPKRSSSSFDASFSA 143

Query: 134 ILVQ-SESQNSPAQILRQFIRIQRLEIEFPTGDLKVERIGGVKWRAEFGITLRSCVIL-- 193
           I  +   + +SP Q+L+ F  I+ L+IE PTG+L +E    +KWRA+FG TL +C+IL  
Sbjct: 144 INDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNCMILGA 203

Query: 194 --LFRGIRYESYDETAVADGFDFIEE------LKSKVFLTISTLITASARHHVLAEVIEE 253
             + +    ++++ +   D  +  E       LK +V  TIS+LI ASARH++L  +I E
Sbjct: 204 SSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIINE 263

Query: 254 HLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGEWRRTRTRVPSTT 313
           H  ++ LVL D +G+GV+ M+++ L+E R            V          RT VP+  
Sbjct: 264 HKSLDRLVLSDADGQGVLCMNREQLEELR------------VTPLSASSASKRTLVPALN 323

Query: 314 VRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAFRTFEGDDVYGEA 342
           +R+ + P ++L  G  ++ ATLV +RP+         + +KE  + ++ +   ++ +G  
Sbjct: 324 MRLWYAPELDLPDGTVLKGATLVAIRPS---------ESKKEVCDASWLSDAFEEPFG-T 379

[Close]

BLAST of Carg20546 vs. TrEMBL
Match: tr|A0A0A0LN04|A0A0A0LN04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307320 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.0e-110
Identity = 233/330 (70.61%), Postives = 258/330 (78.18%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDS--DS 73
           DAF+SLPDS+ILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSL LKVDCVISSDS    
Sbjct: 30  DAFESLPDSLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLKVDCVISSDSXXXX 89

Query: 74  DENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKVER 133
                             DL+SPIL+QSESQNSPAQILRQF RIQ L+IEFPT DLKVER
Sbjct: 90  XXXXXXXXXXXXXXXXXXDLLSPILLQSESQNSPAQILRQFRRIQHLQIEFPTTDLKVER 149

Query: 134 IGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLITAS 193
           +  VKWRAEFG  L+SCVIL+FR IR  + +E  V    DFI  LKSKVF+TIST+ITAS
Sbjct: 150 V--VKWRAEFGDALKSCVILIFREIRKGAIEEDDVDSDLDFIGGLKSKVFMTISTVITAS 209

Query: 194 ARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEGGE 253
           ARHHVL EV+EEHLE+ESL LRDR GEGVV M+K GL+E R  R R G DGG VA    E
Sbjct: 210 ARHHVLGEVVEEHLEMESLALRDRGGEGVVVMEKKGLEELR--RWRMG-DGGEVA----E 269

Query: 254 WRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEVAF 313
           WRRTRTRVPSTTVRMRH  RVE+RRGMWMEDATLVVV+P+ N  K    +++KE+ EVA 
Sbjct: 270 WRRTRTRVPSTTVRMRHKGRVEVRRGMWMEDATLVVVKPSGNGRKSGDGEVDKEDAEVAV 329

Query: 314 RTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           R FEGDDVY EAV ALL+KG+RYQLEMNSF
Sbjct: 330 RAFEGDDVYREAVEALLRKGKRYQLEMNSF 350

[Close]

BLAST of Carg20546 vs. TrEMBL
Match: tr|A0A1S3BC00|A0A1S3BC00_CUCME (F-box protein At1g22220 OS=Cucumis melo OX=3656 GN=LOC103488404 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.5e-109
Identity = 232/332 (69.88%), Postives = 255/332 (76.81%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVIS----SDS 73
           D FDSLPDS+ILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSL L VDCVIS       
Sbjct: 26  DGFDSLPDSLILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLSLTVDCVISXXXXXXX 85

Query: 74  DSDENSFLYGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFIRIQRLEIEFPTGDLKV 133
                               DL+SPILVQSE+QNSPAQILRQF++IQ L+IEFPT DLKV
Sbjct: 86  XXXXXXXXXXXXXXXXXXXXDLLSPILVQSETQNSPAQILRQFLQIQHLQIEFPTTDLKV 145

Query: 134 ERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKVFLTISTLIT 193
           ER+  VKWRAEFG  L+SCVIL+FR IR  + +E  V    DFI  LKSKVF+TISTLIT
Sbjct: 146 ERV--VKWRAEFGDALKSCVILIFREIRKGAIEEDDVDYNLDFIGGLKSKVFMTISTLIT 205

Query: 194 ASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGVAAEG 253
           ASARHHVL EV+EEHLE+ESLVLRDR GEGVV M+K GL+E R  R R G DGG VA   
Sbjct: 206 ASARHHVLGEVVEEHLEMESLVLRDRGGEGVVVMEKKGLEELR--RWRMG-DGGEVA--- 265

Query: 254 GEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKENDEV 313
            EWRRTRTRVPSTTVRMRH  RVE+RRGMWMEDATLVVVRP+ N  K    D++KE+ EV
Sbjct: 266 -EWRRTRTRVPSTTVRMRHRGRVEVRRGMWMEDATLVVVRPSGNCRKSGDGDVDKEDAEV 325

Query: 314 AFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           A + FEGDDVY EAV ALLKKG+RYQLEMNSF
Sbjct: 326 AVKAFEGDDVYREAVEALLKKGKRYQLEMNSF 348

[Close]

BLAST of Carg20546 vs. TrEMBL
Match: tr|A0A251RIS0|A0A251RIS0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G514000 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 181/336 (53.87%), Postives = 225/336 (66.96%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDSDSDE 73
           D FD LPDS+IL IF+ VSDVKTLIRCRAVSKRFNSLVP +DSL L VD VISSDSDSD 
Sbjct: 2   DGFDRLPDSLILQIFDLVSDVKTLIRCRAVSKRFNSLVPQTDSLLLTVDRVISSDSDSDS 61

Query: 74  -----NSFLYGFFKSVVKSFFDLIS--PILVQSESQNSPAQILRQFIRIQRLEIEFPTGD 133
                +  L  F KS++KS  DL+S  P   ++ SQNSPAQILR F  ++ L IE P+GD
Sbjct: 62  ANDDVSHLLVTFLKSILKSIHDLVSARPDPTRARSQNSPAQILRSFHNVRNLSIELPSGD 121

Query: 134 LKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAV-ADGFDFIEELKSKVFLTIS 193
           L++E+   +KWRA+FG TLRSCVIL FR +   +  ET V  D  DF   LK +V  TIS
Sbjct: 122 LRLEKGTVLKWRADFGKTLRSCVILGFRSV--VAGGETPVPGDDADFAGGLKVRVVWTIS 181

Query: 194 TLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGV 253
            LI ASARH++L EV+ E   +E+LVLRDREGEGVV M+K+GL E  +  D    +    
Sbjct: 182 ALIAASARHYLLKEVVREQRGLETLVLRDREGEGVVVMEKEGLRECGR-EDTCDAEXXXX 241

Query: 254 AAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDMEKE 313
                 W R R+RVPS  +RMRH+PR+EL+ G+W+E ATLVVVRP+ +         + E
Sbjct: 242 XXXXXXWDRGRSRVPSVRMRMRHVPRMELKGGVWVEGATLVVVRPSLSG--------DVE 301

Query: 314 NDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
           + ++A   F GD +YGE V ALL K + Y LEMNSF
Sbjct: 302 DGDLAMGAFGGDVLYGEVVEALL-KAKSYLLEMNSF 325

[Close]

BLAST of Carg20546 vs. TrEMBL
Match: tr|W9S0P0|W9S0P0_9ROSA (F-box protein OS=Morus notabilis OX=981085 GN=L484_021557 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.1e-76
Identity = 185/351 (52.71%), Postives = 226/351 (64.39%), Query Frame = 0


Query: 14  DAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSDS-DSD 73
           D FD LPDS+ILLIFNSVSD+KTL+RCRAV +RFNSLVP ++SL LKVDCV+S DS D D
Sbjct: 2   DGFDQLPDSLILLIFNSVSDIKTLLRCRAVCQRFNSLVPQTESLLLKVDCVVSPDSADRD 61

Query: 74  -ENSFLYGFFKSVVKSFFDLISPILVQSES-----QNSPAQILRQFIRIQRLEIEFPTGD 133
            ++SFL+ F KS++KS  DL+SP  + + S     QNSP+QILR F R++ LEIE P+GD
Sbjct: 62  GDDSFLFTFLKSILKSLHDLVSPNPLSNPSSLKPPQNSPSQILRGFDRVRNLEIELPSGD 121

Query: 134 LKVERIGGVKWRAEFGITLRSCVILLFRGIRYESY----DETAVADGFDFIEELKSKVFL 193
           +++E+   VKW AEFG +LRSCVIL FR IR         ++A A   DF   LK++V  
Sbjct: 122 MRLEKGAVVKWTAEFGTSLRSCVILGFRAIRDSETAAIGGDSAGAGEEDFARGLKTRVVW 181

Query: 194 TISTLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWR---------- 253
           TIS LI ASARH+ L EV+ E  E+  LVL DREGEG V MDK GL E R          
Sbjct: 182 TISALIAASARHYFLREVVREQRELRRLVLTDREGEGTVVMDKAGLAELRGXXXXXXXXX 241

Query: 254 -KSRDRSGEDGGGVAAEGGEWRRTRTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPT 313
                                 R RTRVPS  +RMRH PR+EL+ G W E ATLVVVRPT
Sbjct: 242 XXXXXXXXXXXXXXXXXXXXXERNRTRVPSVRMRMRHAPRLELKGGFWAEGATLVVVRPT 301

Query: 314 TNASKDKT-DDMEKENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
              S  +  DD+E+ N  +A   F G+ +YGEAVG+LL K R Y LEMNSF
Sbjct: 302 KEGSGAQVGDDVEEAN--LATMAF-GEGLYGEAVGSLL-KCRSYILEMNSF 348

[Close]

BLAST of Carg20546 vs. TrEMBL
Match: tr|B9H746|B9H746_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G166500v3 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 176/338 (52.07%), Postives = 224/338 (66.27%), Query Frame = 0


Query: 9   LIHIDDAFDSLPDSIILLIFNSVSDVKTLIRCRAVSKRFNSLVPHSDSLFLKVDCVISSD 68
           +I   D FD LPDS+ILLIFNS+SD+K LIRCR+VSKRFNSLVP ++SL LKVDCVIS +
Sbjct: 1   MIEAMDGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPE 60

Query: 69  SDSDENSFLYGFFKSVVKSFFDLISP---ILVQSESQNSPAQILRQFIRIQRLEIEFPTG 128
           SDSD    L+  FKS++KS  DL  P      ++++QNSPA+IL QF RI+ L+IE P G
Sbjct: 61  SDSDS---LFTLFKSLLKSIHDLFKPDPKPTARNQTQNSPARILSQFDRIRDLQIELPAG 120

Query: 129 DLKVERIGGVKWRAEFGITLRSCVILLFRGIRYESYDETAVADGFDFIEELKSKVFLTIS 188
           DLK+E+   +KWRAEFG +L+SCVIL FR  R  + +  +  +  DF   LK++V   IS
Sbjct: 121 DLKLEKGAVIKWRAEFGKSLKSCVILGFR--RVANPEGNSADEEIDFTGGLKTRVVWAIS 180

Query: 189 TLITASARHHVLAEVIEEHLEVESLVLRDREGEGVVEMDKDGLDEWRKSRDRSGEDGGGV 248
            LI ASARH++L +V++ H E+E LVL DREGEG V M+K+GL E R+            
Sbjct: 181 ALIAASARHYLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECRE------------ 240

Query: 249 AAEGGEWRRT--RTRVPSTTVRMRHLPRVELRRGMWMEDATLVVVRPTTNASKDKTDDME 308
           AA GGEW     RT VPS  +RMRH  RV+L+ G+WME  TLVVVRP +          +
Sbjct: 241 AARGGEWEEDGGRTVVPSVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSGGG-------D 300

Query: 309 KENDEVAFRTFEGDDVYGEAVGALLKKGRRYQLEMNSF 342
            E+ E+A   F G  +YGEAV  LL K + Y LEMNSF
Sbjct: 301 GEDAELALGAF-GGGIYGEAVQVLL-KNKSYLLEMNSF 312

The following BLAST results are available for this feature:

BLAST of Carg20546 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951596.1	3.2e-185	99.12	F-box protein At1g22220-like [Cucurbita moschata]	[more]
XP_023537288.1	9.2e-185	99.12	F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002829.1	3.5e-184	98.24	F-box protein At1g78100-like [Cucurbita maxima]	[more]
XP_004150662.2	1.5e-110	70.61	PREDICTED: F-box protein At1g22220 [Cucumis sativus] >KGN62167.1 hypothetical pr...	[more]
XP_008445343.1	3.7e-109	69.88	PREDICTED: F-box protein At1g22220 [Cucumis melo]	[more]

BLAST of Carg20546 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78100.1	1.5e-64	44.35	F-box family protein	[more]
AT1G22220.1	3.5e-61	43.54	F-box family protein	[more]
AT4G18380.1	2.7e-45	35.26	F-box family protein	[more]
AT5G46170.1	1.1e-41	32.32	F-box family protein	[more]
AT1G30200.2	1.5e-40	34.39	F-box family protein	[more]

BLAST of Carg20546 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9S2\|FB91_ARATH	2.7e-63	44.35	F-box protein At1g78100 OS=Arabidopsis thaliana OX=3702 GN=At1g78100 PE=1 SV=1	[more]
sp\|Q9LM18\|FB303_ARATH	6.3e-60	43.54	F-box protein At1g22220 OS=Arabidopsis thaliana OX=3702 GN=At1g22220 PE=2 SV=1	[more]
sp\|O49508\|FB237_ARATH	4.9e-44	35.26	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
sp\|Q9FNK5\|FB285_ARATH	1.9e-40	32.32	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]
sp\|Q9C534\|FB19_ARATH	2.8e-39	34.39	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]

BLAST of Carg20546 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LN04\|A0A0A0LN04_CUCSA	1.0e-110	70.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307320 PE=4 SV=1	[more]
tr\|A0A1S3BC00\|A0A1S3BC00_CUCME	2.5e-109	69.88	F-box protein At1g22220 OS=Cucumis melo OX=3656 GN=LOC103488404 PE=4 SV=1	[more]
tr\|A0A251RIS0\|A0A251RIS0_PRUPE	1.2e-76	53.87	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G514000 PE=4 SV=1	[more]
tr\|W9S0P0\|W9S0P0_9ROSA	6.1e-76	52.71	F-box protein OS=Morus notabilis OX=981085 GN=L484_021557 PE=4 SV=1	[more]
tr\|B9H746\|B9H746_POPTR	1.8e-75	52.07	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G166500v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20546-RA	Carg20546-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 19..60 e-value: 2.9E-4 score: 30.2
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 17..57 e-value: 7.4E-7 score: 28.9
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 13..61 score: 9.683
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 13..57 e-value: 6.2E-7 score: 31.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..253
None	No IPR available	PANTHER	PTHR31215	FAMILY NOT NAMED	coord: 13..341
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 14..74

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20546	Cla022088	Watermelon (97103) v1	carwmB0649
Carg20546	Csa2G307320	Cucumber (Chinese Long) v2	carcuB0669
Carg20546	MELO3C011360	Melon (DHL92) v3.5.1	carmeB0649
Carg20546	ClCG08G011030	Watermelon (Charleston Gray)	carwcgB0633
Carg20546	CSPI02G15820	Wild cucumber (PI 183967)	carcpiB0678
Carg20546	Cucsa.154470	Cucumber (Gy14) v1	carcgyB0726
Carg20546	CmaCh05G004930	Cucurbita maxima (Rimu)	carcmaB0921
Carg20546	CmaCh12G001510	Cucurbita maxima (Rimu)	carcmaB0920
Carg20546	CmoCh05G005160	Cucurbita moschata (Rifu)	carcmoB0894
Carg20546	Lsi08G009570	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20546	Cp4.1LG11g04330	Cucurbita pepo (Zucchini)	carcpeB0924
Carg20546	Cp4.1LG07g01260	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20546	CsGy2G016420	Cucumber (Gy14) v2	carcgybB0645
Carg20546	MELO3C011360.2	Melon (DHL92) v3.6.1	carmedB0659
Carg20546	CsaV3_1G022880	Cucumber (Chinese Long) v3	carcucB0680
Carg20546	Cla97C08G153970	Watermelon (97103) v2	carwmbB0679
Carg20546	Bhi04G000617	Wax gourd	carwgoB0765

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20546	Cucumber (Gy14) v2	carcgybB0648
Carg20546	Cucumber (Gy14) v1	carcgyB0725
Carg20546	Cucurbita moschata (Rifu)	carcmoB0893
Carg20546	Wild cucumber (PI 183967)	carcpiB0682
Carg20546	Cucumber (Chinese Long) v2	carcuB0672
Carg20546	Cucumber (Chinese Long) v3	carcucB0684
Carg20546	Melon (DHL92) v3.5.1	carmeB0650
Carg20546	Melon (DHL92) v3.6.1	carmedB0660
Carg20546	Watermelon (Charleston Gray)	carwcgB0631
Carg20546	Watermelon (97103) v1	carwmB0650
Carg20546	Watermelon (97103) v2	carwmbB0677
Carg20546	Wax gourd	carwgoB0767