CmoCh05G001160 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G001160
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionExonuclease 3'-5' domain-containing 1
LocationCmo_Chr05 : 481471 .. 487715 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGAAAGATTCGCTCAAATGGCGAACACTCCTTCTCGCCAGACGTATATTCCTCTGCCTTCGGACTCAGGTCACTCTCTCTTTCCTCTTTCTTGCGTTCTTGGATTGAACTTCCATTTTCATTCATGATCAATTGCGTATTGTATTCTTTGTCTATCTTTCTTCCTCTTAATGAATGCTTCGTTATTGCAAGTTCGTGGTCTATGGATTGACGTGCGATTCTTAGTAGCAAGTTGTTTTCTCTCTTATCGAAGCTTTAATTGCTGTTTGTTTGGCCAATCAGAAATCGTGGAATATACTTGACTGATGTTGGAAACTGAATTCTGATGCAAGAGAATCACAATGATGTAGTTATCAATGGTTAGAGTAGAAGAATTTGTTTGGAAACTTCAAAAGACATGTTGCTCTAAGTATAGGCCTGTGTTTTCTCTATTTCCATCGTTCTTTCGCCTTTTTACGTCACTTGGATTTAGTTCCAGTTGCTGCGGATAGGTTTGGTTTTCTTGATTGCTTTTGCCGCGCACGGTTGCTTGATTGCTTTACCCGCGCATGTTCCATCAAGTTTTTTAGTTAGCATCTTCATTTTCGCTTCGAGACGATGGAATCTTTCTTGTGGTGGATAGTTTGCGCAATGTTTGATATAAAATAGAACTGGAGATGTTAATTCTCCCCTCGTTCTCCAGCTCCTGTCCTCCATACGACCATTTCGCTCCAAGATTTTTATCATCTTCCAATGTTTTGGTTTTCTTGATTGCTTTTGCCGCACACAGTTGCTTGATTGCTTTACCCGCGCATGCTCCATCAAGTTTTTTAGTTAGTATGTTTATTTTCGCTTCGAGACGATGGAATATTTTCTGTGGTTGATAGTTTGCGCACTGTTTGATATAAAATAGAACTGGAGAGGTTAATTCTCCCATCGTTCCCCAGCTCCTGTCCTTCATACGATCATTTCGCTCCAAGATTTTTATCATCTTCCAATGAGTTCCATTTCATGTGGATTTCAGGTGAAAATCAGAACGATCCTGAAGCCAACAAAACCTTGGTTCCTATTCATATTGTTACTCATGCATCTCAACTCCCTAACGAATTTGTTGATCCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTCAGCCTGTGTCGCCATGGACGTCTTTGTATCATGCAGGTAAATAAAATGCTAAGAACAAATCGCAGTTTTACCATCCTTGTGGAGAGTGAAATTGTATGGCAGTGGCGGATGTGCTAGCTAACCTTCCCAACTGAGGGAGTCAATGGTTCTAACTTATAATTTCATTCTTTTAGTCATCTGGTGATACTGTCAATTCATAATCCAAGCCGCTTTCTTGCAAGAAAACAACTAATATTATAGCTTAAGAAATTTAATTAGCGCTCCTGGATAGTCCTCGACTTGTAGCTATAGTAACTCATCCTTTAAATTACAGGGGTTGATTACTGTCAAAGGCTTGGACATTCAAGAATGTTCAGTTTCTACTTTACTAAAAAACAGTGATTCAAATTAGTTGACATTATCTATAAATCTGTGCTGTTCATTTCTTGGCAGATTGCATTTCCAGATGCTATATATCTGGTTGATGCTGTTCAGGGAGGAGAGGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACGAAAGTTATTCATGATTGTAAACGAGATAGTGAGGTCTCGTCTGAACTTTGTTTCCGTTACAGATTGCCGTCACAGAGACATGACATGTTTTAGCTAATGTTGACTCTATTTTTTTCCCTGTAGGCATTGTACTTTCAGTTTGGTATTAAGTTGAACAACGTTATTGATACACAGGTGATTATCAATTGTGAGAAGCCTGACACTCTTTACTTGTTTACACCCTTTTCTCATGCATTATATTTTATCTTATTTTAGAGTGCTTAGCCACTTAGTGTGCCAATTTCATGTTACTAGAACATAAGAATATTTTTTGTGCTTTTCTTCTTCTATGTTTTCTTGGATAGAAAATGAAACTATCATATCAGGAAGATGGATTCTACTATTCCACTGATCGTTGTTCCATTATTTCTTATTTAAGTTCCTAGAAGTTTTCATGATGTTAATTTTTCACATCTACTTTGCACTTGTACGATTTGAATTTACAGTCTGCCAGTATTTTTATAAATTTATAATTCTACGTACTCATTTTAAAGGTTTATGTAAATTTTCTCTCAATGAACTCTAATCTTAACTTACTATGGATTATTAACTGATTGAAATCTGCTATCTGATAATTTTTAAGGTTGAAAGTCTGCATGTCTTCAAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGTGGTTATCTTGTGACATAAATGCCAATAAAGAGTATGATTTTCTTGATTTAAAAGAATGATCTGAACAATTCATTTTAAGTTTGAGCTACCTTGTAATTACTTTGGAGCCAAGTGTTTGTATGTGTAAGCTGCAATATGGAGGAAGGCTGAGTTATTTGGACCTTCCTGTTTTAATTTTCAATTGTATTACTTGATTCAGATTGCATATTCACTTATAGAGGAGCAAGAGGGATGGACAAAGACGCCAGATAACTATATCTCCTTTGTTGGTCTTCTTGCAGATTCACGTTATTGTGGTATTATACTAATCCTGGTATCTAGATATTCTCCATTCTTTATCATGGAATTTCATGCATTTTTCTTTTTCTTCTAAACATCTCGGATAAAATTACCCATACTCACTCAAAAATATGAACTGATATTTCTTATGAAACTTCAAAAGCAGCAAAGCTTGATTTATTGCTTGCCATCTTCATGTTAAGAAGCTCCATACTTCCTACTTATTTTGAGGGTCATGTTTCCATGAGCTGCATGGTTGGGGATGGTTAATTAACCAGAACCTCCTGCCTGAAAAGGAAAAAAAAAAGTATAAATTTAAATTTGGAAGCCATCACATGACTAATCCCTAGCGGTACGGTGGAGGGACAATAATTGCACTTGGTTAATTGGATCTGTGTCTCTAAGCGAAATTAATCGAGCTTGTGGGTGCTATAATAACATCAACATAAAGAACTTGATTTTAAATGGAAAGGGAGCTTCATAACACTTCTCGCCCCTTTCCATCTCAAAATATCGAGCTCTTAATTTCATAGACCAGGTACAAGCTTGAGAATTGTGATAAGATTATATTTGGAAACGTTATGTGGATTGCGCATTCATCTCTCGCATACTTTGTTTCTCATTCTTCATTTTGTGTAATGTTACAATTCTGGTACCAAGGAAATCAGAATGACCGACTAGGAGCCTAATTTTAGAGTCTAGAGGCATCGTACATTGATTGTGTACACTTAATTGGCACTTGACTTAGTCTTCGTAAGCATGAGGAGGTTGAGTAAAGTATAACCAAAGGGTTCAGTGCTCATGAGGCTGTGTAAGAGAATTGCATTTCATGCATTCTCCATTCAAAACTGTTGCTATTCGTGGTTGTGAAATGAGAGATTCTTGTTCTCATAAAGATGGCCGTATATTTTTTATTCCTCTTGGTTGCCGTTGTAATACCCTTTGTTTCATTTTTCTTTCTTTCCCTTGTTTGTTGCCTTGAAACGTTTCCTTCCTGGAGAAATCTACGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGAAAATGTTGGTGGATGTCGCTTGGATCTAAATTGTTTGGCATGTTAATTTAATTATCAGAATTTTCTGGAAGGAATAATCTAGATTCTACGTCAAGTTCTTGTGGTCAGTGGAGAAGTTAACAAGCTTTTGTTATATGAATGCATTTCTTTATTATTTTATAACTTAATGCTTTTTGCTGCTAATGCTTACATTTTTATTCTATATTGAAATAATATGTAATGTAGGTGTATCATATGTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGGCAGGTTAGTTTTTTCATGGTCGTATTGCTGTGGATAGTGTTGTATCTTGGCAAGAAGTTTCTATATATTAAGCATTGTTTTTCGTTATGAGGTATTTTATAGGTCAGATGTGCTTGATTCCTAAATGTAGAATCCTTCTTTTGGAGTAGACAAGTATAAATATAATGTAGAGACATTTCAAGTCCATTGAGTTAACAAAAGGGACATGGAAACTAAGATTATTGGTCTGCAGGTACTGTATAATTATGTCCATAATATGATAAGATTCAAAATGTTATCTCGTCATAAAATTATATGCAGGTATCGTGTAAATGTTCCACAAGTTTATGTATCTTTGCATAAAAACTAAATTCTAAATTTGTATTTGACAGGACCCGAAGTTTTGGACCTATAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTGCTTTACATCTATCACAAGTTGATGGAGAAATTGAATCATCAATCGCTGTGGTACCTCGCAGTGCGTGGTGCTTTGTACTGCCGGTGTTTCTGCATCAATGATAATGGATATGCTAACTGGCCTCCTCTCCCTTCTGTTCCAGGTTTTCTTTAAGAACACACCTTACCATGTGCAGTCCATATAATGAGAATAATTCCAAATTTAACATTCTAATATGCTAAGTTGATTAAACTATCATTACAAACTTTTCAACATAATATGATTCTGTGGTGTTTCAATATTGTTGGCTTCTTTTATGTTATGATTTCACAATTGATATTGGGTTTAAAATTCAAAGTGGCTATTTAGCAATGTGAGAAATGTTGGCTCACCATCTTTCATTCAATTATCCCAATCTGCTGGAATGTGCAAAACATCAAATATATTAAAATTTATAATGTTGTATTATCTAATTATTATTGACACGTGGTATGTGGTTTCTGTCCTTAGGGTTCTTAGACTACGTTTCACTTCAAATCTTATTTTTTCATTTGATGCGTCTAAAACCTTTTGTTACATGGTCTCAATTGATCACCTTTATTGGTCTTACATGTTTTTTCAGATAACCTTGTAGTAGAGGACAAAGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGACATTCCCCGTGGAATGATGGGTCGCGTAATTGGTAGGAGAGGAGCCTCAATTTTGGCAATAAAGGAATCTTGCAAGTAATTCACTATCGACAAATCCCTTTAGACTTCATTTATATCCTTTAGGCTAAAAAAATACCATAGCCGTTGTTTTTTCTCACCTTGGGTTCTTAAAATGCAGGGCGGAAATTCTCGTTGGCGGCACTAAGGGCCCACCGGACAAGGTAAGACTCTCTTTTCATTCACTTCAAAACAGACCACTATAAAGCCTAAAATAGAATGCTATTCTTTGAACTTTGCTGTGAATTTCCTGGATTCCTCTCTCCATTTGCTTCAAATCCCACTGCCTAGATTAGACCTCAACACCTCCTTTTGAGTTATTTGTTAAAACCCCCTGGAACAAACAAAGGGGACTCGCTCTGCTTGTCTCGAAGTCTCTGAGTATCAGCCAAAATCCTTTTGAATGTTGATGGACATTGAAAGTTGTTCTGTCAGTAAGATGAATGTAATTGTGGTGATGTAGGTTTTCGTCATTGGACCCGTGAGGCAGGTAAGGAAGGCAGAAGCTATGATACGAGGAAGCTTGCTTGAAATGTGATTGAATGAACATGAAAACCGTGTTGTGATGAACATGAACGCAAAATCCTCAATATTAAGAATACAGTTTCAGCTGCTAATACTAGTAGATCCCGTATGCAAGGGATTACTTTACATACTTCACAATCTTTTGTATAGGTACAGTAGCTTTGAGAAGCAAATTTTATGTGAAAAATATTATCAAATCAAAATATGAAAATTGAAATAAAACTTTGTTTTTACCTTCAAACTTAATAAATCTAAAATAAATTCG

mRNA sequence

AAATTGAAAGATTCGCTCAAATGGCGAACACTCCTTCTCGCCAGACGTATATTCCTCTGCCTTCGGACTCAGGTGAAAATCAGAACGATCCTGAAGCCAACAAAACCTTGGTTCCTATTCATATTGTTACTCATGCATCTCAACTCCCTAACGAATTTGTTGATCCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTCAGCCTGTGTCGCCATGGACGTCTTTGTATCATGCAGATTGCATTTCCAGATGCTATATATCTGGTTGATGCTGTTCAGGGAGGAGAGGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACGAAAGTTATTCATGATTGTAAACGAGATAGTGAGGCATTGTACTTTCAGTTTGGTATTAAGTTGAACAACGTTATTGATACACAGATTGCATATTCACTTATAGAGGAGCAAGAGGGATGGACAAAGACGCCAGATAACTATATCTCCTTTGTTGGTCTTCTTGCAGATTCACGTTATTGTGGTGTATCATATGTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGGCAGGACCCGAAGTTTTGGACCTATAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTGCTTTACATCTATCACAAGTTGATGGAGAAATTGAATCATCAATCGCTGTGGTACCTCGCAGTGCGTGGTGCTTTGTACTGCCGGTGTTTCTGCATCAATGATAATGGATATGCTAACTGGCCTCCTCTCCCTTCTGTTCCAGATAACCTTGTAGTAGAGGACAAAGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGACATTCCCCGTGGAATGATGGGTCGCGTAATTGGTAGGAGAGGAGCCTCAATTTTGGCAATAAAGGAATCTTGCAAGGCGGAAATTCTCGTTGGCGGCACTAAGGGCCCACCGGACAAGGTTTTCGTCATTGGACCCGTGAGGCAGGTAAGGAAGGCAGAAGCTATGATACGAGGAAGCTTGCTTGAAATGTGATTGAATGAACATGAAAACCGTGTTGTGATGAACATGAACGCAAAATCCTCAATATTAAGAATACAGTTTCAGCTGCTAATACTAGTAGATCCCGTATGCAAGGGATTACTTTACATACTTCACAATCTTTTGTATAGGTACAGTAGCTTTGAGAAGCAAATTTTATGTGAAAAATATTATCAAATCAAAATATGAAAATTGAAATAAAACTTTGTTTTTACCTTCAAACTTAATAAATCTAAAATAAATTCG

Coding sequence (CDS)

ATGGCGAACACTCCTTCTCGCCAGACGTATATTCCTCTGCCTTCGGACTCAGGTGAAAATCAGAACGATCCTGAAGCCAACAAAACCTTGGTTCCTATTCATATTGTTACTCATGCATCTCAACTCCCTAACGAATTTGTTGATCCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTCAGCCTGTGTCGCCATGGACGTCTTTGTATCATGCAGATTGCATTTCCAGATGCTATATATCTGGTTGATGCTGTTCAGGGAGGAGAGGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACGAAAGTTATTCATGATTGTAAACGAGATAGTGAGGCATTGTACTTTCAGTTTGGTATTAAGTTGAACAACGTTATTGATACACAGATTGCATATTCACTTATAGAGGAGCAAGAGGGATGGACAAAGACGCCAGATAACTATATCTCCTTTGTTGGTCTTCTTGCAGATTCACGTTATTGTGGTGTATCATATGTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGGCAGGACCCGAAGTTTTGGACCTATAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTGCTTTACATCTATCACAAGTTGATGGAGAAATTGAATCATCAATCGCTGTGGTACCTCGCAGTGCGTGGTGCTTTGTACTGCCGGTGTTTCTGCATCAATGATAATGGATATGCTAACTGGCCTCCTCTCCCTTCTGTTCCAGATAACCTTGTAGTAGAGGACAAAGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGACATTCCCCGTGGAATGATGGGTCGCGTAATTGGTAGGAGAGGAGCCTCAATTTTGGCAATAAAGGAATCTTGCAAGGCGGAAATTCTCGTTGGCGGCACTAAGGGCCCACCGGACAAGGTTTTCGTCATTGGACCCGTGAGGCAGGTAAGGAAGGCAGAAGCTATGATACGAGGAAGCTTGCTTGAAATGTGA
Homology
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BLAST of CmoCh05G001160 vs. Swiss-Prot
Match: EXD1_HUMAN (piRNA biogenesis protein EXD1 OS=Homo sapiens GN=EXD1 PE=1 SV=4)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16
Identity = 53/172 (30.81%), Postives = 89/172 (51.74%), Query Frame = 1 

Query: 52  EKPLVVGFDCEGVSLCRHGRLCIMQIAFPDAIYLVDA-VQGGEELVKVCKPALESTYVTK 111
           +K  V+    EG ++CRHG+LC +Q+A    +YL D  + G        +  LE   + K
Sbjct: 96  KKQNVLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAFHNGLQMILEDKRILK 155

Query: 112 VIHDCKRDSEALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCG 171
           VIHDC+  S+ L  Q+GI LNNV DTQ+A  L    E     P+   +    L       
Sbjct: 156 VIHDCRWLSDCLSHQYGILLNNVFDTQVADVLQFSMETGGYLPNCITTLQESLIKHLQVA 215

Query: 172 VSYVE-KEEVRLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKL 222
             Y+   E+ + L++++P+ W  RP+S  +++  A +  +LL +   L++++
Sbjct: 216 PKYLSFLEKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPLRLALLDEM 267

[Close]
BLAST of CmoCh05G001160 vs. Swiss-Prot
Match: EXD1_MOUSE (piRNA biogenesis protein EXD1 OS=Mus musculus GN=Exd1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16
Identity = 55/173 (31.79%), Postives = 89/173 (51.45%), Query Frame = 1 

Query: 52  EKPLVVGFDCEGVSLCRHGRLCIMQIAFPDAIYLVDA-VQGGEELVKVCKPALESTYVTK 111
           +K  V+    EG ++CRHG+LC +Q+A    +YL D  + G        +  LE   + K
Sbjct: 153 KKQSVLSVAAEGANVCRHGKLCWLQVATNSRVYLFDIFLLGSRAFNNGLQMILEDKRILK 212

Query: 112 VIHDCKRDSEALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFV--GLLADSRY 171
           VIHDC+  S+ L  Q+GI LNNV DTQ+A  L    E     P N IS +   L+   + 
Sbjct: 213 VIHDCRWLSDCLSHQYGIMLNNVFDTQVADVLQFSMETGGFLP-NCISTLQESLIRHLKV 272

Query: 172 CGVSYVEKEEVRLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKL 222
                   EE +  ++++P+ W  RPL   +++  A +  +LL +   L++++
Sbjct: 273 APRYLFFLEERQKRIQENPEIWLTRPLPPSLLKILALETTYLLPLRLVLLDEV 324

[Close]
BLAST of CmoCh05G001160 vs. Swiss-Prot
Match: RP6L1_ARATH (Protein RRP6-like 1 OS=Arabidopsis thaliana GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-07
Identity = 44/153 (28.76%), Postives = 70/153 (45.75%), Query Frame = 1 

Query: 70  GRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIK 129
           G  C+MQI+     Y+VD  +  + +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 130 LNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLLRQDPKF 189
           + N+ DT  A  ++       K   N + F+       YCGV+  ++ +     + D   
Sbjct: 211 VCNLFDTGQASRVL-------KLERNSLEFLL----KHYCGVAANKEYQ-----KAD--- 270

Query: 190 WTYRPLSELMVRAAADDVRFLLYIYHKLMEKLN 223
           W  RPL ++M R A +D  +LLYIY  +  +L+
Sbjct: 271 WRIRPLPDVMKRYAREDTHYLLYIYDVMRMELH 284

[Close]
BLAST of CmoCh05G001160 vs. Swiss-Prot
Match: EXD1_BOMMO (piRNA biogenesis protein EXD1 OS=Bombyx mori GN=EXD1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 6.7e-06
Identity = 41/164 (25.00%), Postives = 75/164 (45.73%), Query Frame = 1 

Query: 62  EGVSLCRHGRLCIMQIAFPDAIYLVDA-VQGGEELVKVCKPALESTYVTKVIHDCKRDSE 121
           +G ++ R  ++  + ++    IY+ D  V          K  LE     K+ HDC++ S+
Sbjct: 120 DGANMGRKCKMPFLVLSTDHQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSD 179

Query: 122 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 181
            LY +  +KL +V DTQ+   +I + +    T  N +  +G       C  +Y+  ++  
Sbjct: 180 CLYHKHNVKLKSVFDTQVGDLIITKNK--KVTLPNKVKSLG------ECLTNYLGLQQNT 239

Query: 182 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQ 225
           +  + D    T RPLS  +  + A ++ FL    H L E +N +
Sbjct: 240 IDEKLDIVQSTERPLSVKIKDSLARNIAFL----HHLSEVINEE 271

[Close]
BLAST of CmoCh05G001160 vs. TrEMBL
Match: A0A0A0LN42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352390 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 8.7e-178
Identity = 302/340 (88.82%), Postives = 319/340 (93.82%), Query Frame = 1 

Query: 1   MANTP-SRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF 60
           MANTP S QT IPLPSDSGENQ DPEAN TLVPIHIVTH SQLP EFV+PSPEKPLVVGF
Sbjct: 1   MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGF 60

Query: 61  DCEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS 120
           DCEGV LCRHG LC+MQIAFPDA+YLVDAVQGGEELVKVCKPALES YVTKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 121 EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV 180
           EALYFQFGIKLNNVIDTQIAYSL+EEQEG TKTPDNYISFV LLADSRYCGVSYVEKEEV
Sbjct: 121 EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 181 RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC 240
           RLLLR+DPKFWTYRP+SELMVRAAADDVRFLLYIYHK+MEKLNH+SLWYLAVRGALYCRC
Sbjct: 181 RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRC 240

Query: 241 FCINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES 300
           FCI+DNGYA+WPPLPSVPDNLV E  APEEEILSVLD+P GMMGRVIGRRGASIL+IKES
Sbjct: 241 FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 301 CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           C AEIL+GG KGPPDKV +IG VRQVRKAEAM+RG +LE+
Sbjct: 301 CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340

[Close]
BLAST of CmoCh05G001160 vs. TrEMBL
Match: F6H383_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00650 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 5.0e-157
Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1 

Query: 4   TPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEG 63
           +PS+ TYIP+PSD G    D E    LVPIHIVT  SQLP EF++PSPE+ LV+GFDCEG
Sbjct: 33  SPSQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEG 92

Query: 64  VSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALY 123
           V LCRHG LCIMQIAFPDAIYLVDA+QGGE L+K CKPALES+Y+TKVIHDCKRDSEALY
Sbjct: 93  VDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALY 152

Query: 124 FQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLL 183
           FQFGIKL+NV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCGVSY+EK+EVR LL
Sbjct: 153 FQFGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLL 212

Query: 184 RQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIN 243
           RQ+P FWT+RPLS+LMVRAAADDVRFLLYIYHK+MEKLN +SLWYLAVRGALYCRCFCIN
Sbjct: 213 RQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCIN 272

Query: 244 DNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAE 303
           DN YA+WPPLP +PDNL+VE  APEEEILSVL +P G MGRVIGRRGASIL++KESC AE
Sbjct: 273 DNDYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAE 332

Query: 304 ILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           IL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 333 ILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 368

[Close]
BLAST of CmoCh05G001160 vs. TrEMBL
Match: A5B4I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007988 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 5.0e-157
Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1 

Query: 4   TPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEG 63
           +PS+ TYIP+PSD G    D E    LVPIHIVT  SQLP EF++PSPE+ LV+GFDCEG
Sbjct: 5   SPSQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEG 64

Query: 64  VSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALY 123
           V LCRHG LCIMQIAFPDAIYLVDA+QGGE L+K CKPALES+Y+TKVIHDCKRDSEALY
Sbjct: 65  VDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALY 124

Query: 124 FQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLL 183
           FQFGIKL+NV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCGVSY+EK+EVR LL
Sbjct: 125 FQFGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLL 184

Query: 184 RQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIN 243
           RQ+P FWT+RPLS+LMVRAAADDVRFLLYIYHK+MEKLN +SLWYLAVRGALYCRCFCIN
Sbjct: 185 RQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCIN 244

Query: 244 DNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAE 303
           DN YA+WPPLP +PDNL+VE  APEEEILSVL +P G MGRVIGRRGASIL++KESC AE
Sbjct: 245 DNDYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAE 304

Query: 304 ILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           IL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 305 ILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 340

[Close]
BLAST of CmoCh05G001160 vs. TrEMBL
Match: A0A067GMR3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019356mg PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 7.2e-156
Identity = 262/339 (77.29%), Postives = 301/339 (88.79%), Query Frame = 1 

Query: 1   MANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFD 60
           MA++PS QT+IPL SD      D +   ++VPIHIVT+ASQLP EF++PS E+ LV+GFD
Sbjct: 1   MASSPSHQTHIPLSSDP-----DGKPIDSVVPIHIVTNASQLPAEFLEPSSERQLVIGFD 60

Query: 61  CEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSE 120
           CEGV LCRHG LCIMQ+AFPDAIYLVDA+QGGE +VK CKPALES+Y+TKVIHDCKRDSE
Sbjct: 61  CEGVDLCRHGSLCIMQLAFPDAIYLVDAIQGGETVVKACKPALESSYITKVIHDCKRDSE 120

Query: 121 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 180
           ALYFQFGIKL+NV+DTQIAYSLIEEQEG  ++PD+YISFVGLLAD RYCG+SY EKEEVR
Sbjct: 121 ALYFQFGIKLHNVVDTQIAYSLIEEQEGRKRSPDDYISFVGLLADPRYCGISYQEKEEVR 180

Query: 181 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF 240
           +LLRQDP+FWTYRPL+ELMVRAAADDVRFL YIYH +M+KLN QSLWYLAVRGALYCRCF
Sbjct: 181 VLLRQDPQFWTYRPLTELMVRAAADDVRFLPYIYHNMMKKLNQQSLWYLAVRGALYCRCF 240

Query: 241 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 300
           CIN+N Y +WPPLP VPD L+VE   PEEEILS+LD+P G MGR+IGRRG+SILAIKESC
Sbjct: 241 CINENDYVDWPPLPPVPDYLIVEGDVPEEEILSILDVPPGKMGRIIGRRGSSILAIKESC 300

Query: 301 KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
            AEIL+GG KGPPDKVF+IGPV+QVRKAEAM+RG +LEM
Sbjct: 301 NAEILIGGAKGPPDKVFIIGPVKQVRKAEAMLRGRMLEM 334

[Close]
BLAST of CmoCh05G001160 vs. TrEMBL
Match: V4TU07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008867mg PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 7.2e-156
Identity = 262/339 (77.29%), Postives = 301/339 (88.79%), Query Frame = 1 

Query: 1   MANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFD 60
           MA++PS QT+IPL SD      D +   ++VPIHIVT+ASQLP EF++PS E+ LV+GFD
Sbjct: 1   MASSPSHQTHIPLSSDP-----DGKPIDSVVPIHIVTNASQLPAEFLEPSSERQLVIGFD 60

Query: 61  CEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSE 120
           CEGV LCRHG LCIMQ+AFPDAIYLVDA+QGGE +VK CKPALES+Y+TKVIHDCKRDSE
Sbjct: 61  CEGVDLCRHGSLCIMQLAFPDAIYLVDAIQGGETVVKACKPALESSYITKVIHDCKRDSE 120

Query: 121 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 180
           ALYFQFGIKL+NV+DTQIAYSLIEEQEG  ++PD+YISFVGLLAD RYCG+SY EKEEVR
Sbjct: 121 ALYFQFGIKLHNVVDTQIAYSLIEEQEGRKRSPDDYISFVGLLADPRYCGISYQEKEEVR 180

Query: 181 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF 240
           +LLRQDP+FWTYRPL+ELMVRAAADDVRFL YIYH +M+KLN QSLWYLAVRGALYCRCF
Sbjct: 181 VLLRQDPQFWTYRPLTELMVRAAADDVRFLPYIYHNMMKKLNQQSLWYLAVRGALYCRCF 240

Query: 241 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 300
           CIN+N Y +WPPLP VPD L+VE   PEEEILS+LD+P G MGR+IGRRG+SILAIKESC
Sbjct: 241 CINENDYVDWPPLPPVPDYLIVEGDVPEEEILSILDVPPGKMGRIIGRRGSSILAIKESC 300

Query: 301 KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
            AEIL+GG KGPPDKVF+IGPV+QVRKAEAM+RG +LEM
Sbjct: 301 NAEILIGGAKGPPDKVFIIGPVKQVRKAEAMLRGRMLEM 334

[Close]
BLAST of CmoCh05G001160 vs. TAIR10
Match: AT2G25910.2 (AT2G25910.2 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein)

HSP 1 Score: 510.4 bits (1313), Expect = 8.7e-145
Identity = 237/339 (69.91%), Postives = 291/339 (85.84%), Query Frame = 1 

Query: 2   ANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDC 61
           +++P++  ++P+P + G      EAN+  VPI+IVT   QLP +F++PSPEK LV+GFDC
Sbjct: 3   SSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGFDC 62

Query: 62  EGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEA 121
           EGV LCRHG+LCIMQIAF +AIYLVD ++GGE ++K CKPALES Y+TKVIHDCKRDSEA
Sbjct: 63  EGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDSEA 122

Query: 122 LYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRL 181
           LYFQFGI+L+NV+DTQIAYSLIEEQEG  +  D+YISFV LLAD RYCG+SY EKEEVR+
Sbjct: 123 LYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEVRV 182

Query: 182 LLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF- 241
           L+RQDPKFWTYRP++ELM+RAAADDVRFLLY+YHK+M KLN +SLW+LAVRGALYCRC  
Sbjct: 183 LMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLC 242

Query: 242 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 301
           C+ND  +A+WP +P +PDNL  ED+  EEEILSVLD+P G MGRVIGR+GASILAIKE+C
Sbjct: 243 CMNDADFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEAC 302

Query: 302 -KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLE 339
             AEIL+GG KGPPDK+FVIGPVR+VRKAEA++RG +++
Sbjct: 303 NSAEILIGGAKGPPDKIFVIGPVREVRKAEAILRGRMID 341

[Close]
BLAST of CmoCh05G001160 vs. TAIR10
Match: AT1G54440.2 (AT1G54440.2 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 44/153 (28.76%), Postives = 70/153 (45.75%), Query Frame = 1 

Query: 70  GRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIK 129
           G  C+MQI+     Y+VD  +  + +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 130 LNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLLRQDPKF 189
           + N+ DT  A  ++       K   N + F+       YCGV+  ++ +     + D   
Sbjct: 211 VCNLFDTGQASRVL-------KLERNSLEFLL----KHYCGVAANKEYQ-----KAD--- 270

Query: 190 WTYRPLSELMVRAAADDVRFLLYIYHKLMEKLN 223
           W  RPL ++M R A +D  +LLYIY  +  +L+
Sbjct: 271 WRIRPLPDVMKRYAREDTHYLLYIYDVMRMELH 284

[Close]
BLAST of CmoCh05G001160 vs. NCBI nr
Match: gi|449450328|ref|XP_004142915.1| (PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 630.9 bits (1626), Expect = 1.2e-177
Identity = 302/340 (88.82%), Postives = 319/340 (93.82%), Query Frame = 1 

Query: 1   MANTP-SRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF 60
           MANTP S QT IPLPSDSGENQ DPEAN TLVPIHIVTH SQLP EFV+PSPEKPLVVGF
Sbjct: 1   MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGF 60

Query: 61  DCEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS 120
           DCEGV LCRHG LC+MQIAFPDA+YLVDAVQGGEELVKVCKPALES YVTKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 121 EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV 180
           EALYFQFGIKLNNVIDTQIAYSL+EEQEG TKTPDNYISFV LLADSRYCGVSYVEKEEV
Sbjct: 121 EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 181 RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC 240
           RLLLR+DPKFWTYRP+SELMVRAAADDVRFLLYIYHK+MEKLNH+SLWYLAVRGALYCRC
Sbjct: 181 RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRC 240

Query: 241 FCINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES 300
           FCI+DNGYA+WPPLPSVPDNLV E  APEEEILSVLD+P GMMGRVIGRRGASIL+IKES
Sbjct: 241 FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 301 CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           C AEIL+GG KGPPDKV +IG VRQVRKAEAM+RG +LE+
Sbjct: 301 CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340

[Close]
BLAST of CmoCh05G001160 vs. NCBI nr
Match: gi|659087525|ref|XP_008444500.1| (PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 3.6e-177
Identity = 302/340 (88.82%), Postives = 318/340 (93.53%), Query Frame = 1 

Query: 1   MANTP-SRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF 60
           MANTP S QT IPLPSDSGENQ DPEAN TLVPIHIVTH SQLP EFV+PS EKPLVVGF
Sbjct: 1   MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGF 60

Query: 61  DCEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS 120
           DCEGV LCRHG LC+MQIAFPDA+YLVDAVQGGEELVKVCKPALES YVTKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 121 EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV 180
           EALYFQFGIKLNNVIDTQIAYSL+EEQEG TKTPDNYISFV LLADSRYCGVSYVEKEEV
Sbjct: 121 EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 181 RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC 240
           RLLLR+DPKFWTYRP+SELMVRAAADDVRFLLYIYHK+MEKLNHQSLWYLAVRGALYCRC
Sbjct: 181 RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRC 240

Query: 241 FCINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES 300
           FCI+DNGYA+WPPLPSVPDNLV E  APEEEILSVLD+P GMMGRVIGRRGASIL+IKES
Sbjct: 241 FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 301 CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           C AEIL+GG KGPPDKV +IG VRQVRKAEAM+RG +LE+
Sbjct: 301 CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340

[Close]
BLAST of CmoCh05G001160 vs. NCBI nr
Match: gi|720035557|ref|XP_010267080.1| (PREDICTED: uncharacterized protein LOC104604444 [Nelumbo nucifera])

HSP 1 Score: 564.7 bits (1454), Expect = 1.1e-157
Identity = 265/339 (78.17%), Postives = 302/339 (89.09%), Query Frame = 1 

Query: 1   MANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFD 60
           MA+ PS QT +PLPS +G+   D EA   LVPIHIVTHASQLP EF++PSPE+PLV+GFD
Sbjct: 1   MASPPSHQTCVPLPSGAGDKCPDHEAQLLLVPIHIVTHASQLPIEFLEPSPERPLVIGFD 60

Query: 61  CEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSE 120
           CEGV LCR+G LCIMQ+AFPDAIYLVDAVQGGE L+K CKPALES+Y+TKVIHDCKRDSE
Sbjct: 61  CEGVDLCRYGTLCIMQLAFPDAIYLVDAVQGGEMLMKACKPALESSYITKVIHDCKRDSE 120

Query: 121 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 180
           ALYFQFGIKL+NV+DTQIAYSLIEEQEG T++P +YISFV LLAD RYCG+SY+EK+EVR
Sbjct: 121 ALYFQFGIKLHNVVDTQIAYSLIEEQEGRTRSPYDYISFVSLLADPRYCGISYIEKQEVR 180

Query: 181 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF 240
           +LLRQDP+FWTYRPLSELMVRAAADDVRFLLYIYHK+MEKLN QSLW+LAV GALYCRCF
Sbjct: 181 VLLRQDPEFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNKQSLWHLAVHGALYCRCF 240

Query: 241 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 300
           CINDN YA+WP LP +PD+L  E   PEEEILSVL++P G MG VIGRRGASI +IKESC
Sbjct: 241 CINDNEYADWPSLPRIPDDLAAERNVPEEEILSVLNVPPGKMGLVIGRRGASIQSIKESC 300

Query: 301 KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
            AEIL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 301 NAEILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 339

[Close]
BLAST of CmoCh05G001160 vs. NCBI nr
Match: gi|225429426|ref|XP_002276186.1| (PREDICTED: exosome complex exonuclease RRP6 [Vitis vinifera])

HSP 1 Score: 562.0 bits (1447), Expect = 7.1e-157
Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1 

Query: 4   TPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEG 63
           +PS+ TYIP+PSD G    D E    LVPIHIVT  SQLP EF++PSPE+ LV+GFDCEG
Sbjct: 5   SPSQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEG 64

Query: 64  VSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALY 123
           V LCRHG LCIMQIAFPDAIYLVDA+QGGE L+K CKPALES+Y+TKVIHDCKRDSEALY
Sbjct: 65  VDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALY 124

Query: 124 FQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLL 183
           FQFGIKL+NV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCGVSY+EK+EVR LL
Sbjct: 125 FQFGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLL 184

Query: 184 RQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIN 243
           RQ+P FWT+RPLS+LMVRAAADDVRFLLYIYHK+MEKLN +SLWYLAVRGALYCRCFCIN
Sbjct: 185 RQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCIN 244

Query: 244 DNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAE 303
           DN YA+WPPLP +PDNL+VE  APEEEILSVL +P G MGRVIGRRGASIL++KESC AE
Sbjct: 245 DNDYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAE 304

Query: 304 ILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           IL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 305 ILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 340

[Close]
BLAST of CmoCh05G001160 vs. NCBI nr
Match: gi|645227265|ref|XP_008220433.1| (PREDICTED: exosome component 10 isoform X2 [Prunus mume])

HSP 1 Score: 559.7 bits (1441), Expect = 3.5e-156
Identity = 260/335 (77.61%), Postives = 296/335 (88.36%), Query Frame = 1 

Query: 5   PSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEGV 64
           P  QT++PL  D GE   + E    LVPIH+VTHASQLP EF++PS E+ LV+GFDCEGV
Sbjct: 6   PPYQTHLPLSPDPGEKPLNNEPQLPLVPIHVVTHASQLPAEFLEPSAERQLVIGFDCEGV 65

Query: 65  SLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALYF 124
            LCRHG LCIMQ+AFPDAIYLVDA+QGG  L++ CKPALES+Y+TKVIHDCKRDSEALYF
Sbjct: 66  DLCRHGTLCIMQLAFPDAIYLVDAIQGGAMLIQACKPALESSYITKVIHDCKRDSEALYF 125

Query: 125 QFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLLR 184
           QFGIKLNNV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCG+SY+EKEEVR LLR
Sbjct: 126 QFGIKLNNVVDTQIAYSLIEEQEGRKRLLDDYISFVGLLADPRYCGISYLEKEEVRFLLR 185

Query: 185 QDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIND 244
           QDP FWTYRPLSE MVRAAADDVRFLLYIY+K+MEKLN QSLWYLAVRGALYCRCFCIND
Sbjct: 186 QDPNFWTYRPLSEQMVRAAADDVRFLLYIYYKMMEKLNQQSLWYLAVRGALYCRCFCIND 245

Query: 245 NGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAEI 304
           N +A+WPPLP +PDNL+V+  APEEEILSVLD+P G MGRVIGRRGASIL+IKESC AEI
Sbjct: 246 NNFADWPPLPPIPDNLIVDGNAPEEEILSVLDVPPGKMGRVIGRRGASILSIKESCNAEI 305

Query: 305 LVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           L+GG KGPPDKVF+IGPV+QVRKAEAM+RG ++++
Sbjct: 306 LIGGDKGPPDKVFIIGPVKQVRKAEAMLRGKMMDV 340

The following BLAST results are available for this feature:
BLAST of CmoCh05G001160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXD1_HUMAN1.1e-1630.81piRNA biogenesis protein EXD1 OS=Homo sapiens GN=EXD1 PE=1 SV=4[more]
EXD1_MOUSE5.5e-1631.79piRNA biogenesis protein EXD1 OS=Mus musculus GN=Exd1 PE=1 SV=1[more]
RP6L1_ARATH2.7e-0728.76Protein RRP6-like 1 OS=Arabidopsis thaliana GN=RRP6L1 PE=2 SV=1[more]
EXD1_BOMMO6.7e-0625.00piRNA biogenesis protein EXD1 OS=Bombyx mori GN=EXD1 PE=1 SV=2[more]
BLAST of CmoCh05G001160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN42_CUCSA8.7e-17888.82Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352390 PE=4 SV=1[more]
F6H383_VITVI5.0e-15778.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00650 PE=4 SV=... [more]
A5B4I6_VITVI5.0e-15778.87Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007988 PE=4 SV=1[more]
A0A067GMR3_CITSI7.2e-15677.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019356mg PE=4 SV=1[more]
V4TU07_9ROSI7.2e-15677.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008867mg PE=4 SV=1[more]
BLAST of CmoCh05G001160 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G25910.28.7e-14569.91 3'-5' exonuclease domain-containing protein / K homology domain-cont... [more]
AT1G54440.21.5e-0828.76 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC d... [more]
BLAST of CmoCh05G001160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450328|ref|XP_004142915.1|1.2e-17788.82PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis sat... [more]
gi|659087525|ref|XP_008444500.1|3.6e-17788.82PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis mel... [more]
gi|720035557|ref|XP_010267080.1|1.1e-15778.17PREDICTED: uncharacterized protein LOC104604444 [Nelumbo nucifera][more]
gi|225429426|ref|XP_002276186.1|7.1e-15778.87PREDICTED: exosome complex exonuclease RRP6 [Vitis vinifera][more]
gi|645227265|ref|XP_008220433.1|3.5e-15677.61PREDICTED: exosome component 10 isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006139 nucleobase-containing compound metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G001160.1CmoCh05G001160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 44..221
score: 1.6
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 33..222
score: 6.2
IPR004087K Homology domainSMARTSM00322kh_6coord: 269..337
score: 9.
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 271..336
score: 4.8
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 275..333
score: 3.
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 270..332
score: 11
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 269..336
score: 3.21
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 34..229
score: 7.5
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 27..244
score: 1.73
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..339
score: 2.9E
NoneNo IPR availablePANTHERPTHR12124:SF45SUBFAMILY NOT NAMEDcoord: 1..339
score: 2.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G001160Cucsa.395280Cucumber (Gy14) v1cgycmoB1093
CmoCh05G001160CmaCh12G006250Cucurbita maxima (Rimu)cmacmoB199
CmoCh05G001160CmaCh05G001100Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G001160Cla022662Watermelon (97103) v1cmowmB748
CmoCh05G001160Csa2G352390Cucumber (Chinese Long) v2cmocuB777
CmoCh05G001160MELO3C010771Melon (DHL92) v3.5.1cmomeB718
CmoCh05G001160ClCG08G016850Watermelon (Charleston Gray)cmowcgB716
CmoCh05G001160CSPI02G18190Wild cucumber (PI 183967)cmocpiB782
CmoCh05G001160Lsi08G015640Bottle gourd (USVL1VR-Ls)cmolsiB731
CmoCh05G001160Cp4.1LG11g00140Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G001160Cp4.1LG07g06200Cucurbita pepo (Zucchini)cmocpeB750
CmoCh05G001160MELO3C010771.2Melon (DHL92) v3.6.1cmomedB815
CmoCh05G001160CsaV3_2G025770Cucumber (Chinese Long) v3cmocucB0918
CmoCh05G001160Cla97C08G160540Watermelon (97103) v2cmowmbB802
CmoCh05G001160Bhi04G000435Wax gourdcmowgoB0944
CmoCh05G001160CsGy2G018080Cucumber (Gy14) v2cgybcmoB238
CmoCh05G001160Carg23976Silver-seed gourdcarcmoB0949
CmoCh05G001160Carg11910Silver-seed gourdcarcmoB0263
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G001160CmoCh12G005620Cucurbita moschata (Rifu)cmocmoB156
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G001160Cucumber (Gy14) v2cgybcmoB533
CmoCh05G001160Melon (DHL92) v3.6.1cmomedB826
CmoCh05G001160Silver-seed gourdcarcmoB0443
CmoCh05G001160Silver-seed gourdcarcmoB1047
CmoCh05G001160Cucumber (Chinese Long) v3cmocucB0933
CmoCh05G001160Cucumber (Chinese Long) v3cmocucB0949
CmoCh05G001160Watermelon (97103) v2cmowmbB794
CmoCh05G001160Wax gourdcmowgoB0960
CmoCh05G001160Cucurbita maxima (Rimu)cmacmoB483
CmoCh05G001160Cucurbita moschata (Rifu)cmocmoB033
CmoCh05G001160Cucurbita moschata (Rifu)cmocmoB369
CmoCh05G001160Cucumber (Gy14) v1cgycmoB0969
CmoCh05G001160Cucurbita maxima (Rimu)cmacmoB062
CmoCh05G001160Wild cucumber (PI 183967)cmocpiB795
CmoCh05G001160Cucumber (Chinese Long) v2cmocuB792
CmoCh05G001160Melon (DHL92) v3.5.1cmomeB729
CmoCh05G001160Watermelon (Charleston Gray)cmowcgB708
CmoCh05G001160Watermelon (97103) v1cmowmB754
CmoCh05G001160Cucurbita pepo (Zucchini)cmocpeB734
CmoCh05G001160Cucurbita pepo (Zucchini)cmocpeB740
CmoCh05G001160Bottle gourd (USVL1VR-Ls)cmolsiB715