CmoCh05G001160.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G001160.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionExonuclease 3'-5' domain-containing 1
LocationCmo_Chr05 : 481471 .. 487715 (+)
Sequence length1292
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGAAAGATTCGCTCAAATGGCGAACACTCCTTCTCGCCAGACGTATATTCCTCTGCCTTCGGACTCAGGTCACTCTCTCTTTCCTCTTTCTTGCGTTCTTGGATTGAACTTCCATTTTCATTCATGATCAATTGCGTATTGTATTCTTTGTCTATCTTTCTTCCTCTTAATGAATGCTTCGTTATTGCAAGTTCGTGGTCTATGGATTGACGTGCGATTCTTAGTAGCAAGTTGTTTTCTCTCTTATCGAAGCTTTAATTGCTGTTTGTTTGGCCAATCAGAAATCGTGGAATATACTTGACTGATGTTGGAAACTGAATTCTGATGCAAGAGAATCACAATGATGTAGTTATCAATGGTTAGAGTAGAAGAATTTGTTTGGAAACTTCAAAAGACATGTTGCTCTAAGTATAGGCCTGTGTTTTCTCTATTTCCATCGTTCTTTCGCCTTTTTACGTCACTTGGATTTAGTTCCAGTTGCTGCGGATAGGTTTGGTTTTCTTGATTGCTTTTGCCGCGCACGGTTGCTTGATTGCTTTACCCGCGCATGTTCCATCAAGTTTTTTAGTTAGCATCTTCATTTTCGCTTCGAGACGATGGAATCTTTCTTGTGGTGGATAGTTTGCGCAATGTTTGATATAAAATAGAACTGGAGATGTTAATTCTCCCCTCGTTCTCCAGCTCCTGTCCTCCATACGACCATTTCGCTCCAAGATTTTTATCATCTTCCAATGTTTTGGTTTTCTTGATTGCTTTTGCCGCACACAGTTGCTTGATTGCTTTACCCGCGCATGCTCCATCAAGTTTTTTAGTTAGTATGTTTATTTTCGCTTCGAGACGATGGAATATTTTCTGTGGTTGATAGTTTGCGCACTGTTTGATATAAAATAGAACTGGAGAGGTTAATTCTCCCATCGTTCCCCAGCTCCTGTCCTTCATACGATCATTTCGCTCCAAGATTTTTATCATCTTCCAATGAGTTCCATTTCATGTGGATTTCAGGTGAAAATCAGAACGATCCTGAAGCCAACAAAACCTTGGTTCCTATTCATATTGTTACTCATGCATCTCAACTCCCTAACGAATTTGTTGATCCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTCAGCCTGTGTCGCCATGGACGTCTTTGTATCATGCAGGTAAATAAAATGCTAAGAACAAATCGCAGTTTTACCATCCTTGTGGAGAGTGAAATTGTATGGCAGTGGCGGATGTGCTAGCTAACCTTCCCAACTGAGGGAGTCAATGGTTCTAACTTATAATTTCATTCTTTTAGTCATCTGGTGATACTGTCAATTCATAATCCAAGCCGCTTTCTTGCAAGAAAACAACTAATATTATAGCTTAAGAAATTTAATTAGCGCTCCTGGATAGTCCTCGACTTGTAGCTATAGTAACTCATCCTTTAAATTACAGGGGTTGATTACTGTCAAAGGCTTGGACATTCAAGAATGTTCAGTTTCTACTTTACTAAAAAACAGTGATTCAAATTAGTTGACATTATCTATAAATCTGTGCTGTTCATTTCTTGGCAGATTGCATTTCCAGATGCTATATATCTGGTTGATGCTGTTCAGGGAGGAGAGGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACGAAAGTTATTCATGATTGTAAACGAGATAGTGAGGTCTCGTCTGAACTTTGTTTCCGTTACAGATTGCCGTCACAGAGACATGACATGTTTTAGCTAATGTTGACTCTATTTTTTTCCCTGTAGGCATTGTACTTTCAGTTTGGTATTAAGTTGAACAACGTTATTGATACACAGGTGATTATCAATTGTGAGAAGCCTGACACTCTTTACTTGTTTACACCCTTTTCTCATGCATTATATTTTATCTTATTTTAGAGTGCTTAGCCACTTAGTGTGCCAATTTCATGTTACTAGAACATAAGAATATTTTTTGTGCTTTTCTTCTTCTATGTTTTCTTGGATAGAAAATGAAACTATCATATCAGGAAGATGGATTCTACTATTCCACTGATCGTTGTTCCATTATTTCTTATTTAAGTTCCTAGAAGTTTTCATGATGTTAATTTTTCACATCTACTTTGCACTTGTACGATTTGAATTTACAGTCTGCCAGTATTTTTATAAATTTATAATTCTACGTACTCATTTTAAAGGTTTATGTAAATTTTCTCTCAATGAACTCTAATCTTAACTTACTATGGATTATTAACTGATTGAAATCTGCTATCTGATAATTTTTAAGGTTGAAAGTCTGCATGTCTTCAAAAAGAAAAAGAGAGAGAGAGAGAGAGAGAGTGGTTATCTTGTGACATAAATGCCAATAAAGAGTATGATTTTCTTGATTTAAAAGAATGATCTGAACAATTCATTTTAAGTTTGAGCTACCTTGTAATTACTTTGGAGCCAAGTGTTTGTATGTGTAAGCTGCAATATGGAGGAAGGCTGAGTTATTTGGACCTTCCTGTTTTAATTTTCAATTGTATTACTTGATTCAGATTGCATATTCACTTATAGAGGAGCAAGAGGGATGGACAAAGACGCCAGATAACTATATCTCCTTTGTTGGTCTTCTTGCAGATTCACGTTATTGTGGTATTATACTAATCCTGGTATCTAGATATTCTCCATTCTTTATCATGGAATTTCATGCATTTTTCTTTTTCTTCTAAACATCTCGGATAAAATTACCCATACTCACTCAAAAATATGAACTGATATTTCTTATGAAACTTCAAAAGCAGCAAAGCTTGATTTATTGCTTGCCATCTTCATGTTAAGAAGCTCCATACTTCCTACTTATTTTGAGGGTCATGTTTCCATGAGCTGCATGGTTGGGGATGGTTAATTAACCAGAACCTCCTGCCTGAAAAGGAAAAAAAAAAGTATAAATTTAAATTTGGAAGCCATCACATGACTAATCCCTAGCGGTACGGTGGAGGGACAATAATTGCACTTGGTTAATTGGATCTGTGTCTCTAAGCGAAATTAATCGAGCTTGTGGGTGCTATAATAACATCAACATAAAGAACTTGATTTTAAATGGAAAGGGAGCTTCATAACACTTCTCGCCCCTTTCCATCTCAAAATATCGAGCTCTTAATTTCATAGACCAGGTACAAGCTTGAGAATTGTGATAAGATTATATTTGGAAACGTTATGTGGATTGCGCATTCATCTCTCGCATACTTTGTTTCTCATTCTTCATTTTGTGTAATGTTACAATTCTGGTACCAAGGAAATCAGAATGACCGACTAGGAGCCTAATTTTAGAGTCTAGAGGCATCGTACATTGATTGTGTACACTTAATTGGCACTTGACTTAGTCTTCGTAAGCATGAGGAGGTTGAGTAAAGTATAACCAAAGGGTTCAGTGCTCATGAGGCTGTGTAAGAGAATTGCATTTCATGCATTCTCCATTCAAAACTGTTGCTATTCGTGGTTGTGAAATGAGAGATTCTTGTTCTCATAAAGATGGCCGTATATTTTTTATTCCTCTTGGTTGCCGTTGTAATACCCTTTGTTTCATTTTTCTTTCTTTCCCTTGTTTGTTGCCTTGAAACGTTTCCTTCCTGGAGAAATCTACGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGAAAATGTTGGTGGATGTCGCTTGGATCTAAATTGTTTGGCATGTTAATTTAATTATCAGAATTTTCTGGAAGGAATAATCTAGATTCTACGTCAAGTTCTTGTGGTCAGTGGAGAAGTTAACAAGCTTTTGTTATATGAATGCATTTCTTTATTATTTTATAACTTAATGCTTTTTGCTGCTAATGCTTACATTTTTATTCTATATTGAAATAATATGTAATGTAGGTGTATCATATGTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGGCAGGTTAGTTTTTTCATGGTCGTATTGCTGTGGATAGTGTTGTATCTTGGCAAGAAGTTTCTATATATTAAGCATTGTTTTTCGTTATGAGGTATTTTATAGGTCAGATGTGCTTGATTCCTAAATGTAGAATCCTTCTTTTGGAGTAGACAAGTATAAATATAATGTAGAGACATTTCAAGTCCATTGAGTTAACAAAAGGGACATGGAAACTAAGATTATTGGTCTGCAGGTACTGTATAATTATGTCCATAATATGATAAGATTCAAAATGTTATCTCGTCATAAAATTATATGCAGGTATCGTGTAAATGTTCCACAAGTTTATGTATCTTTGCATAAAAACTAAATTCTAAATTTGTATTTGACAGGACCCGAAGTTTTGGACCTATAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTGCTTTACATCTATCACAAGTTGATGGAGAAATTGAATCATCAATCGCTGTGGTACCTCGCAGTGCGTGGTGCTTTGTACTGCCGGTGTTTCTGCATCAATGATAATGGATATGCTAACTGGCCTCCTCTCCCTTCTGTTCCAGGTTTTCTTTAAGAACACACCTTACCATGTGCAGTCCATATAATGAGAATAATTCCAAATTTAACATTCTAATATGCTAAGTTGATTAAACTATCATTACAAACTTTTCAACATAATATGATTCTGTGGTGTTTCAATATTGTTGGCTTCTTTTATGTTATGATTTCACAATTGATATTGGGTTTAAAATTCAAAGTGGCTATTTAGCAATGTGAGAAATGTTGGCTCACCATCTTTCATTCAATTATCCCAATCTGCTGGAATGTGCAAAACATCAAATATATTAAAATTTATAATGTTGTATTATCTAATTATTATTGACACGTGGTATGTGGTTTCTGTCCTTAGGGTTCTTAGACTACGTTTCACTTCAAATCTTATTTTTTCATTTGATGCGTCTAAAACCTTTTGTTACATGGTCTCAATTGATCACCTTTATTGGTCTTACATGTTTTTTCAGATAACCTTGTAGTAGAGGACAAAGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGACATTCCCCGTGGAATGATGGGTCGCGTAATTGGTAGGAGAGGAGCCTCAATTTTGGCAATAAAGGAATCTTGCAAGTAATTCACTATCGACAAATCCCTTTAGACTTCATTTATATCCTTTAGGCTAAAAAAATACCATAGCCGTTGTTTTTTCTCACCTTGGGTTCTTAAAATGCAGGGCGGAAATTCTCGTTGGCGGCACTAAGGGCCCACCGGACAAGGTAAGACTCTCTTTTCATTCACTTCAAAACAGACCACTATAAAGCCTAAAATAGAATGCTATTCTTTGAACTTTGCTGTGAATTTCCTGGATTCCTCTCTCCATTTGCTTCAAATCCCACTGCCTAGATTAGACCTCAACACCTCCTTTTGAGTTATTTGTTAAAACCCCCTGGAACAAACAAAGGGGACTCGCTCTGCTTGTCTCGAAGTCTCTGAGTATCAGCCAAAATCCTTTTGAATGTTGATGGACATTGAAAGTTGTTCTGTCAGTAAGATGAATGTAATTGTGGTGATGTAGGTTTTCGTCATTGGACCCGTGAGGCAGGTAAGGAAGGCAGAAGCTATGATACGAGGAAGCTTGCTTGAAATGTGATTGAATGAACATGAAAACCGTGTTGTGATGAACATGAACGCAAAATCCTCAATATTAAGAATACAGTTTCAGCTGCTAATACTAGTAGATCCCGTATGCAAGGGATTACTTTACATACTTCACAATCTTTTGTATAGGTACAGTAGCTTTGAGAAGCAAATTTTATGTGAAAAATATTATCAAATCAAAATATGAAAATTGAAATAAAACTTTGTTTTTACCTTCAAACTTAATAAATCTAAAATAAATTCG

mRNA sequence

AAATTGAAAGATTCGCTCAAATGGCGAACACTCCTTCTCGCCAGACGTATATTCCTCTGCCTTCGGACTCAGGTGAAAATCAGAACGATCCTGAAGCCAACAAAACCTTGGTTCCTATTCATATTGTTACTCATGCATCTCAACTCCCTAACGAATTTGTTGATCCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTCAGCCTGTGTCGCCATGGACGTCTTTGTATCATGCAGATTGCATTTCCAGATGCTATATATCTGGTTGATGCTGTTCAGGGAGGAGAGGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACGAAAGTTATTCATGATTGTAAACGAGATAGTGAGGCATTGTACTTTCAGTTTGGTATTAAGTTGAACAACGTTATTGATACACAGATTGCATATTCACTTATAGAGGAGCAAGAGGGATGGACAAAGACGCCAGATAACTATATCTCCTTTGTTGGTCTTCTTGCAGATTCACGTTATTGTGGTGTATCATATGTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGGCAGGACCCGAAGTTTTGGACCTATAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTGCTTTACATCTATCACAAGTTGATGGAGAAATTGAATCATCAATCGCTGTGGTACCTCGCAGTGCGTGGTGCTTTGTACTGCCGGTGTTTCTGCATCAATGATAATGGATATGCTAACTGGCCTCCTCTCCCTTCTGTTCCAGATAACCTTGTAGTAGAGGACAAAGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGACATTCCCCGTGGAATGATGGGTCGCGTAATTGGTAGGAGAGGAGCCTCAATTTTGGCAATAAAGGAATCTTGCAAGGCGGAAATTCTCGTTGGCGGCACTAAGGGCCCACCGGACAAGGTTTTCGTCATTGGACCCGTGAGGCAGGTAAGGAAGGCAGAAGCTATGATACGAGGAAGCTTGCTTGAAATGTGATTGAATGAACATGAAAACCGTGTTGTGATGAACATGAACGCAAAATCCTCAATATTAAGAATACAGTTTCAGCTGCTAATACTAGTAGATCCCGTATGCAAGGGATTACTTTACATACTTCACAATCTTTTGTATAGGTACAGTAGCTTTGAGAAGCAAATTTTATGTGAAAAATATTATCAAATCAAAATATGAAAATTGAAATAAAACTTTGTTTTTACCTTCAAACTTAATAAATCTAAAATAAATTCG

Coding sequence (CDS)

ATGGCGAACACTCCTTCTCGCCAGACGTATATTCCTCTGCCTTCGGACTCAGGTGAAAATCAGAACGATCCTGAAGCCAACAAAACCTTGGTTCCTATTCATATTGTTACTCATGCATCTCAACTCCCTAACGAATTTGTTGATCCATCACCTGAAAAGCCTCTGGTAGTTGGCTTTGATTGTGAAGGTGTCAGCCTGTGTCGCCATGGACGTCTTTGTATCATGCAGATTGCATTTCCAGATGCTATATATCTGGTTGATGCTGTTCAGGGAGGAGAGGAACTTGTGAAAGTCTGTAAGCCTGCCCTTGAGTCCACATATGTCACGAAAGTTATTCATGATTGTAAACGAGATAGTGAGGCATTGTACTTTCAGTTTGGTATTAAGTTGAACAACGTTATTGATACACAGATTGCATATTCACTTATAGAGGAGCAAGAGGGATGGACAAAGACGCCAGATAACTATATCTCCTTTGTTGGTCTTCTTGCAGATTCACGTTATTGTGGTGTATCATATGTGGAGAAGGAAGAGGTCCGCCTCCTACTTAGGCAGGACCCGAAGTTTTGGACCTATAGACCATTGTCTGAATTGATGGTCCGTGCAGCTGCTGATGATGTACGCTTTCTGCTTTACATCTATCACAAGTTGATGGAGAAATTGAATCATCAATCGCTGTGGTACCTCGCAGTGCGTGGTGCTTTGTACTGCCGGTGTTTCTGCATCAATGATAATGGATATGCTAACTGGCCTCCTCTCCCTTCTGTTCCAGATAACCTTGTAGTAGAGGACAAAGCTCCTGAAGAAGAAATTCTTTCAGTCTTAGACATTCCCCGTGGAATGATGGGTCGCGTAATTGGTAGGAGAGGAGCCTCAATTTTGGCAATAAAGGAATCTTGCAAGGCGGAAATTCTCGTTGGCGGCACTAAGGGCCCACCGGACAAGGTTTTCGTCATTGGACCCGTGAGGCAGGTAAGGAAGGCAGAAGCTATGATACGAGGAAGCTTGCTTGAAATGTGA
Homology
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BLAST of CmoCh05G001160.1 vs. Swiss-Prot
Match: EXD1_HUMAN (piRNA biogenesis protein EXD1 OS=Homo sapiens GN=EXD1 PE=1 SV=4)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16
Identity = 53/172 (30.81%), Postives = 89/172 (51.74%), Query Frame = 1 

Query: 52  EKPLVVGFDCEGVSLCRHGRLCIMQIAFPDAIYLVDA-VQGGEELVKVCKPALESTYVTK 111
           +K  V+    EG ++CRHG+LC +Q+A    +YL D  + G        +  LE   + K
Sbjct: 96  KKQNVLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAFHNGLQMILEDKRILK 155

Query: 112 VIHDCKRDSEALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCG 171
           VIHDC+  S+ L  Q+GI LNNV DTQ+A  L    E     P+   +    L       
Sbjct: 156 VIHDCRWLSDCLSHQYGILLNNVFDTQVADVLQFSMETGGYLPNCITTLQESLIKHLQVA 215

Query: 172 VSYVE-KEEVRLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKL 222
             Y+   E+ + L++++P+ W  RP+S  +++  A +  +LL +   L++++
Sbjct: 216 PKYLSFLEKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPLRLALLDEM 267

[Close]
BLAST of CmoCh05G001160.1 vs. Swiss-Prot
Match: EXD1_MOUSE (piRNA biogenesis protein EXD1 OS=Mus musculus GN=Exd1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16
Identity = 55/173 (31.79%), Postives = 89/173 (51.45%), Query Frame = 1 

Query: 52  EKPLVVGFDCEGVSLCRHGRLCIMQIAFPDAIYLVDA-VQGGEELVKVCKPALESTYVTK 111
           +K  V+    EG ++CRHG+LC +Q+A    +YL D  + G        +  LE   + K
Sbjct: 153 KKQSVLSVAAEGANVCRHGKLCWLQVATNSRVYLFDIFLLGSRAFNNGLQMILEDKRILK 212

Query: 112 VIHDCKRDSEALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFV--GLLADSRY 171
           VIHDC+  S+ L  Q+GI LNNV DTQ+A  L    E     P N IS +   L+   + 
Sbjct: 213 VIHDCRWLSDCLSHQYGIMLNNVFDTQVADVLQFSMETGGFLP-NCISTLQESLIRHLKV 272

Query: 172 CGVSYVEKEEVRLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKL 222
                   EE +  ++++P+ W  RPL   +++  A +  +LL +   L++++
Sbjct: 273 APRYLFFLEERQKRIQENPEIWLTRPLPPSLLKILALETTYLLPLRLVLLDEV 324

[Close]
BLAST of CmoCh05G001160.1 vs. Swiss-Prot
Match: RP6L1_ARATH (Protein RRP6-like 1 OS=Arabidopsis thaliana GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-07
Identity = 44/153 (28.76%), Postives = 70/153 (45.75%), Query Frame = 1 

Query: 70  GRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIK 129
           G  C+MQI+     Y+VD  +  + +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 130 LNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLLRQDPKF 189
           + N+ DT  A  ++       K   N + F+       YCGV+  ++ +     + D   
Sbjct: 211 VCNLFDTGQASRVL-------KLERNSLEFLL----KHYCGVAANKEYQ-----KAD--- 270

Query: 190 WTYRPLSELMVRAAADDVRFLLYIYHKLMEKLN 223
           W  RPL ++M R A +D  +LLYIY  +  +L+
Sbjct: 271 WRIRPLPDVMKRYAREDTHYLLYIYDVMRMELH 284

[Close]
BLAST of CmoCh05G001160.1 vs. Swiss-Prot
Match: EXD1_BOMMO (piRNA biogenesis protein EXD1 OS=Bombyx mori GN=EXD1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 6.7e-06
Identity = 41/164 (25.00%), Postives = 75/164 (45.73%), Query Frame = 1 

Query: 62  EGVSLCRHGRLCIMQIAFPDAIYLVDA-VQGGEELVKVCKPALESTYVTKVIHDCKRDSE 121
           +G ++ R  ++  + ++    IY+ D  V          K  LE     K+ HDC++ S+
Sbjct: 120 DGANMGRKCKMPFLVLSTDHQIYIFDIQVMQYHAFESGLKKILEGDSPKKIAHDCRKLSD 179

Query: 122 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 181
            LY +  +KL +V DTQ+   +I + +    T  N +  +G       C  +Y+  ++  
Sbjct: 180 CLYHKHNVKLKSVFDTQVGDLIITKNK--KVTLPNKVKSLG------ECLTNYLGLQQNT 239

Query: 182 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQ 225
           +  + D    T RPLS  +  + A ++ FL    H L E +N +
Sbjct: 240 IDEKLDIVQSTERPLSVKIKDSLARNIAFL----HHLSEVINEE 271

[Close]
BLAST of CmoCh05G001160.1 vs. TrEMBL
Match: A0A0A0LN42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352390 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 8.7e-178
Identity = 302/340 (88.82%), Postives = 319/340 (93.82%), Query Frame = 1 

Query: 1   MANTP-SRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF 60
           MANTP S QT IPLPSDSGENQ DPEAN TLVPIHIVTH SQLP EFV+PSPEKPLVVGF
Sbjct: 1   MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGF 60

Query: 61  DCEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS 120
           DCEGV LCRHG LC+MQIAFPDA+YLVDAVQGGEELVKVCKPALES YVTKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 121 EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV 180
           EALYFQFGIKLNNVIDTQIAYSL+EEQEG TKTPDNYISFV LLADSRYCGVSYVEKEEV
Sbjct: 121 EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 181 RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC 240
           RLLLR+DPKFWTYRP+SELMVRAAADDVRFLLYIYHK+MEKLNH+SLWYLAVRGALYCRC
Sbjct: 181 RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRC 240

Query: 241 FCINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES 300
           FCI+DNGYA+WPPLPSVPDNLV E  APEEEILSVLD+P GMMGRVIGRRGASIL+IKES
Sbjct: 241 FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 301 CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           C AEIL+GG KGPPDKV +IG VRQVRKAEAM+RG +LE+
Sbjct: 301 CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340

[Close]
BLAST of CmoCh05G001160.1 vs. TrEMBL
Match: F6H383_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00650 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 5.0e-157
Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1 

Query: 4   TPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEG 63
           +PS+ TYIP+PSD G    D E    LVPIHIVT  SQLP EF++PSPE+ LV+GFDCEG
Sbjct: 33  SPSQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEG 92

Query: 64  VSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALY 123
           V LCRHG LCIMQIAFPDAIYLVDA+QGGE L+K CKPALES+Y+TKVIHDCKRDSEALY
Sbjct: 93  VDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALY 152

Query: 124 FQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLL 183
           FQFGIKL+NV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCGVSY+EK+EVR LL
Sbjct: 153 FQFGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLL 212

Query: 184 RQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIN 243
           RQ+P FWT+RPLS+LMVRAAADDVRFLLYIYHK+MEKLN +SLWYLAVRGALYCRCFCIN
Sbjct: 213 RQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCIN 272

Query: 244 DNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAE 303
           DN YA+WPPLP +PDNL+VE  APEEEILSVL +P G MGRVIGRRGASIL++KESC AE
Sbjct: 273 DNDYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAE 332

Query: 304 ILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           IL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 333 ILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 368

[Close]
BLAST of CmoCh05G001160.1 vs. TrEMBL
Match: A5B4I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007988 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 5.0e-157
Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1 

Query: 4   TPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEG 63
           +PS+ TYIP+PSD G    D E    LVPIHIVT  SQLP EF++PSPE+ LV+GFDCEG
Sbjct: 5   SPSQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEG 64

Query: 64  VSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALY 123
           V LCRHG LCIMQIAFPDAIYLVDA+QGGE L+K CKPALES+Y+TKVIHDCKRDSEALY
Sbjct: 65  VDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALY 124

Query: 124 FQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLL 183
           FQFGIKL+NV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCGVSY+EK+EVR LL
Sbjct: 125 FQFGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLL 184

Query: 184 RQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIN 243
           RQ+P FWT+RPLS+LMVRAAADDVRFLLYIYHK+MEKLN +SLWYLAVRGALYCRCFCIN
Sbjct: 185 RQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCIN 244

Query: 244 DNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAE 303
           DN YA+WPPLP +PDNL+VE  APEEEILSVL +P G MGRVIGRRGASIL++KESC AE
Sbjct: 245 DNDYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAE 304

Query: 304 ILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           IL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 305 ILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 340

[Close]
BLAST of CmoCh05G001160.1 vs. TrEMBL
Match: A0A067GMR3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019356mg PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 7.2e-156
Identity = 262/339 (77.29%), Postives = 301/339 (88.79%), Query Frame = 1 

Query: 1   MANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFD 60
           MA++PS QT+IPL SD      D +   ++VPIHIVT+ASQLP EF++PS E+ LV+GFD
Sbjct: 1   MASSPSHQTHIPLSSDP-----DGKPIDSVVPIHIVTNASQLPAEFLEPSSERQLVIGFD 60

Query: 61  CEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSE 120
           CEGV LCRHG LCIMQ+AFPDAIYLVDA+QGGE +VK CKPALES+Y+TKVIHDCKRDSE
Sbjct: 61  CEGVDLCRHGSLCIMQLAFPDAIYLVDAIQGGETVVKACKPALESSYITKVIHDCKRDSE 120

Query: 121 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 180
           ALYFQFGIKL+NV+DTQIAYSLIEEQEG  ++PD+YISFVGLLAD RYCG+SY EKEEVR
Sbjct: 121 ALYFQFGIKLHNVVDTQIAYSLIEEQEGRKRSPDDYISFVGLLADPRYCGISYQEKEEVR 180

Query: 181 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF 240
           +LLRQDP+FWTYRPL+ELMVRAAADDVRFL YIYH +M+KLN QSLWYLAVRGALYCRCF
Sbjct: 181 VLLRQDPQFWTYRPLTELMVRAAADDVRFLPYIYHNMMKKLNQQSLWYLAVRGALYCRCF 240

Query: 241 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 300
           CIN+N Y +WPPLP VPD L+VE   PEEEILS+LD+P G MGR+IGRRG+SILAIKESC
Sbjct: 241 CINENDYVDWPPLPPVPDYLIVEGDVPEEEILSILDVPPGKMGRIIGRRGSSILAIKESC 300

Query: 301 KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
            AEIL+GG KGPPDKVF+IGPV+QVRKAEAM+RG +LEM
Sbjct: 301 NAEILIGGAKGPPDKVFIIGPVKQVRKAEAMLRGRMLEM 334

[Close]
BLAST of CmoCh05G001160.1 vs. TrEMBL
Match: V4TU07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008867mg PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 7.2e-156
Identity = 262/339 (77.29%), Postives = 301/339 (88.79%), Query Frame = 1 

Query: 1   MANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFD 60
           MA++PS QT+IPL SD      D +   ++VPIHIVT+ASQLP EF++PS E+ LV+GFD
Sbjct: 1   MASSPSHQTHIPLSSDP-----DGKPIDSVVPIHIVTNASQLPAEFLEPSSERQLVIGFD 60

Query: 61  CEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSE 120
           CEGV LCRHG LCIMQ+AFPDAIYLVDA+QGGE +VK CKPALES+Y+TKVIHDCKRDSE
Sbjct: 61  CEGVDLCRHGSLCIMQLAFPDAIYLVDAIQGGETVVKACKPALESSYITKVIHDCKRDSE 120

Query: 121 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 180
           ALYFQFGIKL+NV+DTQIAYSLIEEQEG  ++PD+YISFVGLLAD RYCG+SY EKEEVR
Sbjct: 121 ALYFQFGIKLHNVVDTQIAYSLIEEQEGRKRSPDDYISFVGLLADPRYCGISYQEKEEVR 180

Query: 181 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF 240
           +LLRQDP+FWTYRPL+ELMVRAAADDVRFL YIYH +M+KLN QSLWYLAVRGALYCRCF
Sbjct: 181 VLLRQDPQFWTYRPLTELMVRAAADDVRFLPYIYHNMMKKLNQQSLWYLAVRGALYCRCF 240

Query: 241 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 300
           CIN+N Y +WPPLP VPD L+VE   PEEEILS+LD+P G MGR+IGRRG+SILAIKESC
Sbjct: 241 CINENDYVDWPPLPPVPDYLIVEGDVPEEEILSILDVPPGKMGRIIGRRGSSILAIKESC 300

Query: 301 KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
            AEIL+GG KGPPDKVF+IGPV+QVRKAEAM+RG +LEM
Sbjct: 301 NAEILIGGAKGPPDKVFIIGPVKQVRKAEAMLRGRMLEM 334

[Close]
BLAST of CmoCh05G001160.1 vs. TAIR10
Match: AT2G25910.2 (AT2G25910.2 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein)

HSP 1 Score: 510.4 bits (1313), Expect = 8.7e-145
Identity = 237/339 (69.91%), Postives = 291/339 (85.84%), Query Frame = 1 

Query: 2   ANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDC 61
           +++P++  ++P+P + G      EAN+  VPI+IVT   QLP +F++PSPEK LV+GFDC
Sbjct: 3   SSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGFDC 62

Query: 62  EGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEA 121
           EGV LCRHG+LCIMQIAF +AIYLVD ++GGE ++K CKPALES Y+TKVIHDCKRDSEA
Sbjct: 63  EGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDSEA 122

Query: 122 LYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRL 181
           LYFQFGI+L+NV+DTQIAYSLIEEQEG  +  D+YISFV LLAD RYCG+SY EKEEVR+
Sbjct: 123 LYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEVRV 182

Query: 182 LLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF- 241
           L+RQDPKFWTYRP++ELM+RAAADDVRFLLY+YHK+M KLN +SLW+LAVRGALYCRC  
Sbjct: 183 LMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLC 242

Query: 242 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 301
           C+ND  +A+WP +P +PDNL  ED+  EEEILSVLD+P G MGRVIGR+GASILAIKE+C
Sbjct: 243 CMNDADFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEAC 302

Query: 302 -KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLE 339
             AEIL+GG KGPPDK+FVIGPVR+VRKAEA++RG +++
Sbjct: 303 NSAEILIGGAKGPPDKIFVIGPVREVRKAEAILRGRMID 341

[Close]
BLAST of CmoCh05G001160.1 vs. TAIR10
Match: AT1G54440.2 (AT1G54440.2 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 44/153 (28.76%), Postives = 70/153 (45.75%), Query Frame = 1 

Query: 70  GRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALYFQFGIK 129
           G  C+MQI+     Y+VD  +  + +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 130 LNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLLRQDPKF 189
           + N+ DT  A  ++       K   N + F+       YCGV+  ++ +     + D   
Sbjct: 211 VCNLFDTGQASRVL-------KLERNSLEFLL----KHYCGVAANKEYQ-----KAD--- 270

Query: 190 WTYRPLSELMVRAAADDVRFLLYIYHKLMEKLN 223
           W  RPL ++M R A +D  +LLYIY  +  +L+
Sbjct: 271 WRIRPLPDVMKRYAREDTHYLLYIYDVMRMELH 284

[Close]
BLAST of CmoCh05G001160.1 vs. NCBI nr
Match: gi|449450328|ref|XP_004142915.1| (PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 630.9 bits (1626), Expect = 1.2e-177
Identity = 302/340 (88.82%), Postives = 319/340 (93.82%), Query Frame = 1 

Query: 1   MANTP-SRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF 60
           MANTP S QT IPLPSDSGENQ DPEAN TLVPIHIVTH SQLP EFV+PSPEKPLVVGF
Sbjct: 1   MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGF 60

Query: 61  DCEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS 120
           DCEGV LCRHG LC+MQIAFPDA+YLVDAVQGGEELVKVCKPALES YVTKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 121 EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV 180
           EALYFQFGIKLNNVIDTQIAYSL+EEQEG TKTPDNYISFV LLADSRYCGVSYVEKEEV
Sbjct: 121 EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 181 RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC 240
           RLLLR+DPKFWTYRP+SELMVRAAADDVRFLLYIYHK+MEKLNH+SLWYLAVRGALYCRC
Sbjct: 181 RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRC 240

Query: 241 FCINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES 300
           FCI+DNGYA+WPPLPSVPDNLV E  APEEEILSVLD+P GMMGRVIGRRGASIL+IKES
Sbjct: 241 FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 301 CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           C AEIL+GG KGPPDKV +IG VRQVRKAEAM+RG +LE+
Sbjct: 301 CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340

[Close]
BLAST of CmoCh05G001160.1 vs. NCBI nr
Match: gi|659087525|ref|XP_008444500.1| (PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 629.4 bits (1622), Expect = 3.6e-177
Identity = 302/340 (88.82%), Postives = 318/340 (93.53%), Query Frame = 1 

Query: 1   MANTP-SRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGF 60
           MANTP S QT IPLPSDSGENQ DPEAN TLVPIHIVTH SQLP EFV+PS EKPLVVGF
Sbjct: 1   MANTPPSHQTCIPLPSDSGENQTDPEANATLVPIHIVTHVSQLPKEFVEPSAEKPLVVGF 60

Query: 61  DCEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDS 120
           DCEGV LCRHG LC+MQIAFPDA+YLVDAVQGGEELVKVCKPALES YVTKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGNLCVMQIAFPDAVYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDS 120

Query: 121 EALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEV 180
           EALYFQFGIKLNNVIDTQIAYSL+EEQEG TKTPDNYISFV LLADSRYCGVSYVEKEEV
Sbjct: 121 EALYFQFGIKLNNVIDTQIAYSLLEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEV 180

Query: 181 RLLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRC 240
           RLLLR+DPKFWTYRP+SELMVRAAADDVRFLLYIYHK+MEKLNHQSLWYLAVRGALYCRC
Sbjct: 181 RLLLRKDPKFWTYRPMSELMVRAAADDVRFLLYIYHKMMEKLNHQSLWYLAVRGALYCRC 240

Query: 241 FCINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKES 300
           FCI+DNGYA+WPPLPSVPDNLV E  APEEEILSVLD+P GMMGRVIGRRGASIL+IKES
Sbjct: 241 FCISDNGYADWPPLPSVPDNLVKEGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKES 300

Query: 301 CKAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           C AEIL+GG KGPPDKV +IG VRQVRKAEAM+RG +LE+
Sbjct: 301 CNAEILIGGAKGPPDKVLIIGSVRQVRKAEAMLRGRMLEI 340

[Close]
BLAST of CmoCh05G001160.1 vs. NCBI nr
Match: gi|720035557|ref|XP_010267080.1| (PREDICTED: uncharacterized protein LOC104604444 [Nelumbo nucifera])

HSP 1 Score: 564.7 bits (1454), Expect = 1.1e-157
Identity = 265/339 (78.17%), Postives = 302/339 (89.09%), Query Frame = 1 

Query: 1   MANTPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFD 60
           MA+ PS QT +PLPS +G+   D EA   LVPIHIVTHASQLP EF++PSPE+PLV+GFD
Sbjct: 1   MASPPSHQTCVPLPSGAGDKCPDHEAQLLLVPIHIVTHASQLPIEFLEPSPERPLVIGFD 60

Query: 61  CEGVSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSE 120
           CEGV LCR+G LCIMQ+AFPDAIYLVDAVQGGE L+K CKPALES+Y+TKVIHDCKRDSE
Sbjct: 61  CEGVDLCRYGTLCIMQLAFPDAIYLVDAVQGGEMLMKACKPALESSYITKVIHDCKRDSE 120

Query: 121 ALYFQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVR 180
           ALYFQFGIKL+NV+DTQIAYSLIEEQEG T++P +YISFV LLAD RYCG+SY+EK+EVR
Sbjct: 121 ALYFQFGIKLHNVVDTQIAYSLIEEQEGRTRSPYDYISFVSLLADPRYCGISYIEKQEVR 180

Query: 181 LLLRQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCF 240
           +LLRQDP+FWTYRPLSELMVRAAADDVRFLLYIYHK+MEKLN QSLW+LAV GALYCRCF
Sbjct: 181 VLLRQDPEFWTYRPLSELMVRAAADDVRFLLYIYHKMMEKLNKQSLWHLAVHGALYCRCF 240

Query: 241 CINDNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESC 300
           CINDN YA+WP LP +PD+L  E   PEEEILSVL++P G MG VIGRRGASI +IKESC
Sbjct: 241 CINDNEYADWPSLPRIPDDLAAERNVPEEEILSVLNVPPGKMGLVIGRRGASIQSIKESC 300

Query: 301 KAEILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
            AEIL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 301 NAEILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 339

[Close]
BLAST of CmoCh05G001160.1 vs. NCBI nr
Match: gi|225429426|ref|XP_002276186.1| (PREDICTED: exosome complex exonuclease RRP6 [Vitis vinifera])

HSP 1 Score: 562.0 bits (1447), Expect = 7.1e-157
Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1 

Query: 4   TPSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEG 63
           +PS+ TYIP+PSD G    D E    LVPIHIVT  SQLP EF++PSPE+ LV+GFDCEG
Sbjct: 5   SPSQPTYIPMPSDPGGKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEG 64

Query: 64  VSLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALY 123
           V LCRHG LCIMQIAFPDAIYLVDA+QGGE L+K CKPALES+Y+TKVIHDCKRDSEALY
Sbjct: 65  VDLCRHGTLCIMQIAFPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALY 124

Query: 124 FQFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLL 183
           FQFGIKL+NV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCGVSY+EK+EVR LL
Sbjct: 125 FQFGIKLHNVVDTQIAYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLL 184

Query: 184 RQDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIN 243
           RQ+P FWT+RPLS+LMVRAAADDVRFLLYIYHK+MEKLN +SLWYLAVRGALYCRCFCIN
Sbjct: 185 RQNPDFWTHRPLSDLMVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCIN 244

Query: 244 DNGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAE 303
           DN YA+WPPLP +PDNL+VE  APEEEILSVL +P G MGRVIGRRGASIL++KESC AE
Sbjct: 245 DNDYADWPPLPPIPDNLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAE 304

Query: 304 ILVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           IL+GG KGPPDKVF+IGPV+QVRKAEA++RG +LEM
Sbjct: 305 ILIGGAKGPPDKVFIIGPVKQVRKAEAILRGRMLEM 340

[Close]
BLAST of CmoCh05G001160.1 vs. NCBI nr
Match: gi|645227265|ref|XP_008220433.1| (PREDICTED: exosome component 10 isoform X2 [Prunus mume])

HSP 1 Score: 559.7 bits (1441), Expect = 3.5e-156
Identity = 260/335 (77.61%), Postives = 296/335 (88.36%), Query Frame = 1 

Query: 5   PSRQTYIPLPSDSGENQNDPEANKTLVPIHIVTHASQLPNEFVDPSPEKPLVVGFDCEGV 64
           P  QT++PL  D GE   + E    LVPIH+VTHASQLP EF++PS E+ LV+GFDCEGV
Sbjct: 6   PPYQTHLPLSPDPGEKPLNNEPQLPLVPIHVVTHASQLPAEFLEPSAERQLVIGFDCEGV 65

Query: 65  SLCRHGRLCIMQIAFPDAIYLVDAVQGGEELVKVCKPALESTYVTKVIHDCKRDSEALYF 124
            LCRHG LCIMQ+AFPDAIYLVDA+QGG  L++ CKPALES+Y+TKVIHDCKRDSEALYF
Sbjct: 66  DLCRHGTLCIMQLAFPDAIYLVDAIQGGAMLIQACKPALESSYITKVIHDCKRDSEALYF 125

Query: 125 QFGIKLNNVIDTQIAYSLIEEQEGWTKTPDNYISFVGLLADSRYCGVSYVEKEEVRLLLR 184
           QFGIKLNNV+DTQIAYSLIEEQEG  +  D+YISFVGLLAD RYCG+SY+EKEEVR LLR
Sbjct: 126 QFGIKLNNVVDTQIAYSLIEEQEGRKRLLDDYISFVGLLADPRYCGISYLEKEEVRFLLR 185

Query: 185 QDPKFWTYRPLSELMVRAAADDVRFLLYIYHKLMEKLNHQSLWYLAVRGALYCRCFCIND 244
           QDP FWTYRPLSE MVRAAADDVRFLLYIY+K+MEKLN QSLWYLAVRGALYCRCFCIND
Sbjct: 186 QDPNFWTYRPLSEQMVRAAADDVRFLLYIYYKMMEKLNQQSLWYLAVRGALYCRCFCIND 245

Query: 245 NGYANWPPLPSVPDNLVVEDKAPEEEILSVLDIPRGMMGRVIGRRGASILAIKESCKAEI 304
           N +A+WPPLP +PDNL+V+  APEEEILSVLD+P G MGRVIGRRGASIL+IKESC AEI
Sbjct: 246 NNFADWPPLPPIPDNLIVDGNAPEEEILSVLDVPPGKMGRVIGRRGASILSIKESCNAEI 305

Query: 305 LVGGTKGPPDKVFVIGPVRQVRKAEAMIRGSLLEM 340
           L+GG KGPPDKVF+IGPV+QVRKAEAM+RG ++++
Sbjct: 306 LIGGDKGPPDKVFIIGPVKQVRKAEAMLRGKMMDV 340

The following BLAST results are available for this feature:
BLAST of CmoCh05G001160.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXD1_HUMAN1.1e-1630.81piRNA biogenesis protein EXD1 OS=Homo sapiens GN=EXD1 PE=1 SV=4[more]
EXD1_MOUSE5.5e-1631.79piRNA biogenesis protein EXD1 OS=Mus musculus GN=Exd1 PE=1 SV=1[more]
RP6L1_ARATH2.7e-0728.76Protein RRP6-like 1 OS=Arabidopsis thaliana GN=RRP6L1 PE=2 SV=1[more]
EXD1_BOMMO6.7e-0625.00piRNA biogenesis protein EXD1 OS=Bombyx mori GN=EXD1 PE=1 SV=2[more]
BLAST of CmoCh05G001160.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN42_CUCSA8.7e-17888.82Uncharacterized protein OS=Cucumis sativus GN=Csa_2G352390 PE=4 SV=1[more]
F6H383_VITVI5.0e-15778.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00650 PE=4 SV=... [more]
A5B4I6_VITVI5.0e-15778.87Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007988 PE=4 SV=1[more]
A0A067GMR3_CITSI7.2e-15677.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019356mg PE=4 SV=1[more]
V4TU07_9ROSI7.2e-15677.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008867mg PE=4 SV=1[more]
BLAST of CmoCh05G001160.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G25910.28.7e-14569.91 3'-5' exonuclease domain-containing protein / K homology domain-cont... [more]
AT1G54440.21.5e-0828.76 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC d... [more]
BLAST of CmoCh05G001160.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450328|ref|XP_004142915.1|1.2e-17788.82PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis sat... [more]
gi|659087525|ref|XP_008444500.1|3.6e-17788.82PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Cucumis mel... [more]
gi|720035557|ref|XP_010267080.1|1.1e-15778.17PREDICTED: uncharacterized protein LOC104604444 [Nelumbo nucifera][more]
gi|225429426|ref|XP_002276186.1|7.1e-15778.87PREDICTED: exosome complex exonuclease RRP6 [Vitis vinifera][more]
gi|645227265|ref|XP_008220433.1|3.5e-15677.61PREDICTED: exosome component 10 isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh05G001160CmoCh05G001160gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh05G001160.1CmoCh05G001160.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G001160.1.exon.1CmoCh05G001160.1.exon.1exon
CmoCh05G001160.1.exon.2CmoCh05G001160.1.exon.2exon
CmoCh05G001160.1.exon.3CmoCh05G001160.1.exon.3exon
CmoCh05G001160.1.exon.4CmoCh05G001160.1.exon.4exon
CmoCh05G001160.1.exon.5CmoCh05G001160.1.exon.5exon
CmoCh05G001160.1.exon.6CmoCh05G001160.1.exon.6exon
CmoCh05G001160.1.exon.7CmoCh05G001160.1.exon.7exon
CmoCh05G001160.1.exon.8CmoCh05G001160.1.exon.8exon
CmoCh05G001160.1.exon.9CmoCh05G001160.1.exon.9exon
CmoCh05G001160.1.exon.10CmoCh05G001160.1.exon.10exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G001160.1.five_prime_UTR.1CmoCh05G001160.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G001160.1.CDS.1CmoCh05G001160.1.CDS.1CDS
CmoCh05G001160.1.CDS.2CmoCh05G001160.1.CDS.2CDS
CmoCh05G001160.1.CDS.3CmoCh05G001160.1.CDS.3CDS
CmoCh05G001160.1.CDS.4CmoCh05G001160.1.CDS.4CDS
CmoCh05G001160.1.CDS.5CmoCh05G001160.1.CDS.5CDS
CmoCh05G001160.1.CDS.6CmoCh05G001160.1.CDS.6CDS
CmoCh05G001160.1.CDS.7CmoCh05G001160.1.CDS.7CDS
CmoCh05G001160.1.CDS.8CmoCh05G001160.1.CDS.8CDS
CmoCh05G001160.1.CDS.9CmoCh05G001160.1.CDS.9CDS
CmoCh05G001160.1.CDS.10CmoCh05G001160.1.CDS.10CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G001160.1.three_prime_UTR.1CmoCh05G001160.1.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 44..221
score: 1.6
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 33..222
score: 6.2
IPR004087K Homology domainSMARTSM00322kh_6coord: 269..337
score: 9.
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 271..336
score: 4.8
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 275..333
score: 3.
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 270..332
score: 11
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 269..336
score: 3.21
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 34..229
score: 7.5
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 27..244
score: 1.73
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..339
score: 2.9E
NoneNo IPR availablePANTHERPTHR12124:SF45SUBFAMILY NOT NAMEDcoord: 1..339
score: 2.9E