CmoCh05G000760 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAAAAAAAAAAAAAAATTGATGAAGCATGCAAAAGGTATATAATATTTTCGTCCCACGTTGGCTAATTTAGGGAATGATCATGATCTACAAGTAAAGTCTTACTTTCCTAACCCCACTTTTATCCACTGGGAAAAAAATATCGAAATTAAATCTCTCTCTCTCTTTTATTTATTTTTTATTTTTTATTTATTTTTCCTTTTCATTTACAATGTATTAAAAAAAAAATTCAAATAATGGTGAAATTTACCATCCTTGAAATTGTGATGGTGTGAAAGGCAGCAAAAAGAAGACTAAGCATGAGACGCCAATAAGGAAGGAAATAAGTTGGCCAGCTTAGACGGCGATGGTTATGGTTATTATGGCTGCCCCTAATTTCTAACCCCCCTCCTTCTCCAAACCTCGTCTTTCCCTTTCCCTTTCCCTTTCCTTATAAATTCCCACGTCAAAACGTGCCTTCGCCGCTGCACCTTTCTTCATCCTTCTTCTATTTCTCCTTCCCAAGAACACCCATTTTCTTCTCTCAACTGCCATGGCCACCGCCAACAGATGGTTGAAGCCTGAGGTTGTTCCCTCTCTCCCTCTCTTTTCCCATTCATTTTCCATTACTTCCTGAGAAAAACATGAAGAAATCAACAACTTTACCAATCAAAACTTGATTTCCTTGAATGCATATGCAGGTGTATCCTCTCTTTGCTACGGTTGGTGTGGCCGTTGGCATCTGTGGTATGCAGCTTGTTAGAAACATAACCACCAATCCTGAAGTCAGGTAAATATTTCAAGCTGTACAAAAACATGTTCAATATATTGGAAATGTATTGTATAATACTTTCACCAAGAGAAGGGGGGGCTAAACAGTCCTGATTTGTTCTGAAATGGAACATGACAGGGTTACCAAAGAGAGGAGAGCTGCTGGAGTGCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGGCTTAGGAAGTTCCTCAGAACAAGGCCCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAAATCCAATTCTGATACCAACCTTTGAATTTAGTTCCAAATAATGAAGTGATATTTGAACTGATGGTGTATGATTCTTCTGTTATTTTTATAAGGGAAACCCAAACCGAAAATTCCAAATATCTAACATAATGTTCTGCTAAT AAATTAAAAAAAAAAAAAAATTGATGAAGCATGCAAAAGGCAGCAAAAAGAAGACTAAGCATGAGACGCCAATAAGGAAGGAAATAAGTTGGCCAGCTTAGACGGCGATGGTTATGGTTATTATGGCTGCCCCTAATTTCTAACCCCCCTCCTTCTCCAAACCTCGTCTTTCCCTTTCCCTTTCCCTTTCCTTATAAATTCCCACGTCAAAACGTGCCTTCGCCGCTGCACCTTTCTTCATCCTTCTTCTATTTCTCCTTCCCAAGAACACCCATTTTCTTCTCTCAACTGCCATGGCCACCGCCAACAGATGGTTGAAGCCTGAGGTGTATCCTCTCTTTGCTACGGTTGGTGTGGCCGTTGGCATCTGTGGTATGCAGCTTGTTAGAAACATAACCACCAATCCTGAAGTCAGGGTTACCAAAGAGAGGAGAGCTGCTGGAGTGCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGGCTTAGGAAGTTCCTCAGAACAAGGCCCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAAATCCAATTCTGATACCAACCTTTGAATTTAGTTCCAAATAATGAAGTGATATTTGAACTGATGGTGTATGATTCTTCTGTTATTTTTATAAGGGAAACCCAAACCGAAAATTCCAAATATCTAACATAATGTTCTGCTAAT ATGGCCACCGCCAACAGATGGTTGAAGCCTGAGGTGTATCCTCTCTTTGCTACGGTTGGTGTGGCCGTTGGCATCTGTGGTATGCAGCTTGTTAGAAACATAACCACCAATCCTGAAGTCAGGGTTACCAAAGAGAGGAGAGCTGCTGGAGTGCTTGACAACTTTGAAGAAGGTGAGAAGTATGCAGAGCATGGGCTTAGGAAGTTCCTCAGAACAAGGCCCCCTCAGATTATGCCTTCCATCAACAAATTCTTCTCAGATCCAAACTAA
BLAST of CmoCh05G000760 vs. TrEMBL
Match: A0A0A0LMX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G350420 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.1e-42 Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 1
BLAST of CmoCh05G000760 vs. TrEMBL
Match: A0A0B0NLL4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_19724 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 1.6e-38 Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 1
BLAST of CmoCh05G000760 vs. TrEMBL
Match: A0A0D2RN01_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G172200 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 3.5e-38 Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 1
BLAST of CmoCh05G000760 vs. TrEMBL
Match: A0A061E739_THECC (B12D protein OS=Theobroma cacao GN=TCM_010755 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 2.5e-36 Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 1
BLAST of CmoCh05G000760 vs. TrEMBL
Match: D7TAM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02450 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 3.3e-36 Identity = 73/88 (82.95%), Postives = 80/88 (90.91%), Query Frame = 1
BLAST of CmoCh05G000760 vs. TAIR10
Match: AT3G48140.1 (AT3G48140.1 B12D protein) HSP 1 Score: 133.7 bits (335), Expect = 5.8e-32 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 1
BLAST of CmoCh05G000760 vs. TAIR10
Match: AT3G29970.1 (AT3G29970.1 B12D protein) HSP 1 Score: 105.1 bits (261), Expect = 2.2e-23 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1
BLAST of CmoCh05G000760 vs. NCBI nr
Match: gi|449450387|ref|XP_004142944.1| (PREDICTED: uncharacterized protein LOC101222643 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.5e-42 Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 1
BLAST of CmoCh05G000760 vs. NCBI nr
Match: gi|1009152981|ref|XP_015894389.1| (PREDICTED: uncharacterized protein LOC107428374 [Ziziphus jujuba]) HSP 1 Score: 172.2 bits (435), Expect = 4.2e-40 Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 1
BLAST of CmoCh05G000760 vs. NCBI nr
Match: gi|728833246|gb|KHG12689.1| (Uncharacterized protein F383_19724 [Gossypium arboreum]) HSP 1 Score: 166.4 bits (420), Expect = 2.3e-38 Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 1
BLAST of CmoCh05G000760 vs. NCBI nr
Match: gi|823158763|ref|XP_012479217.1| (PREDICTED: uncharacterized protein LOC105794543 [Gossypium raimondii]) HSP 1 Score: 165.2 bits (417), Expect = 5.1e-38 Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 1
BLAST of CmoCh05G000760 vs. NCBI nr
Match: gi|672162216|ref|XP_008800943.1| (PREDICTED: uncharacterized protein LOC103715180 [Phoenix dactylifera]) HSP 1 Score: 162.2 bits (409), Expect = 4.3e-37 Identity = 74/88 (84.09%), Postives = 82/88 (93.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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