CmoCh04G029920 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G029920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Sorghum bicolor protein targeted either to mitochondria or chloroplast proteins T50848
Location	Cmo_Chr04 : 21088080 .. 21088745 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTCAGGAAATCGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAGAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAAACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA

mRNA sequence

ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTCAGGAAATCGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAGAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAAACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA

Coding sequence (CDS)

ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTCAGGAAATCGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAGAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAAACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA

Homology

[Close]

BLAST of CmoCh04G029920 vs. TrEMBL
Match: A0A0A0KDH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014570 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 149/230 (64.78%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKA--SPRSLVAFPGRFRKSRTHISSMKSLQPV 60
           MAS  IRCG N   L     N+ DGCD K    PRS+VA   R RK R++I++MKSL+PV
Sbjct: 1   MASFGIRCGGNCGVL-----NLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPV 60

Query: 61  KGHVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAV 120
              ++ +   +E IS + LD+WMKESVV+IVKNLREAPLF+R+Y  E+GK AR ETEKAV
Sbjct: 61  ---IRRKNVDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYK-ENGKTARFETEKAV 120

Query: 121 EEDRWRTLEEQWKNGEARTPEGIIFVQELEEE-------DYEGESKAWGIVVQGRCVERG 180
           EEDRW  LE QWKNG   TPEGIIFVQ+LE+E       + EGE KAWGIVVQGR VERG
Sbjct: 121 EEDRWPILENQWKNGAEATPEGIIFVQKLEDEEEEEEEVEMEGEPKAWGIVVQGRGVERG 180

Query: 181 APVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           APVCYLLKTS +    G+GLWCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Sbjct: 181 APVCYLLKTSRA---AGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 218

[Close]

BLAST of CmoCh04G029920 vs. TrEMBL
Match: A0A067JQ58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03320 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 109/227 (48.02%), Postives = 145/227 (63.88%), Query Frame = 1


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60
           MAS+ IRC  N   L     N+    +    P S VA       S+     MK+   +K 
Sbjct: 1   MASVGIRCQGNCHFL-----NLRGPENSPVGPCS-VAISAGSDSSKLKRWRMKAAMTIKK 60

Query: 61  H-----VKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETE 120
           +            N A+  +KLD+WMK+SVVEIVKNLREAPL ++ Y  + G+   L+TE
Sbjct: 61  NENMISTSDSAAANAAVVYEKLDEWMKDSVVEIVKNLREAPLLVQVY--DKGETTALKTE 120

Query: 121 KAVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEG-ESKAWGIVVQGRCVERGAPV 180
           KAVEE+ W T++E+W   E   PEG+IFV++L+EED E   ++AWGIVVQG+ V+ G PV
Sbjct: 121 KAVEEETWSTVKEKWGKRETPLPEGVIFVEQLDEEDPEEITTRAWGIVVQGKGVDCG-PV 180

Query: 181 CYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           CYLLKTS  R G G+G +CTHFCL++VK+FRE+T+SQLKN WLL+ Q
Sbjct: 181 CYLLKTS--RVGSGLGAFCTHFCLMKVKSFRESTRSQLKNFWLLEGQ 216

[Close]

BLAST of CmoCh04G029920 vs. TrEMBL
Match: W9RLD7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011243 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.8e-41
Identity = 109/257 (42.41%), Postives = 151/257 (58.75%), Query Frame = 1


Query: 2   ASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLV-----AFPGRFRKSRTHISSM---- 61
           +S ++RCG N + LD    NV +  +Q A   SL+     A+    R+ R   ++M    
Sbjct: 3   SSASVRCGGNCNLLDRRLGNVQNPSNQSARSCSLMIRNNGAYSSGCRRGRIISATMTMER 62

Query: 62  KSLQPV------KGHVK-GRKKGN--EAISRDKLDKWMKESVVEIVKNLREAPLFLRWYT 121
           K   P        G V+ GR+ G   EA++ +KLD+WM+ESVV+IVKNLREAPL ++ Y 
Sbjct: 63  KRNAPAPMFPLESGDVESGRRSGGGAEAVAYEKLDEWMRESVVDIVKNLREAPLMVQLYG 122

Query: 122 TEDGKG------ARLETEKAVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYE---- 181
            +D +G       R+  +KAV E+ W     +W+ G++  PEG+IFV++L E+  E    
Sbjct: 123 KKDERGQNDGLSGRMVMQKAVAEEHWDVAMGKWEAGDSPMPEGLIFVEKLAEQQQEEEND 182

Query: 182 -------GESKAWGIVVQGRCVERGAPVCYLLKTSSSRGGGG--VGLWCTHFCLVRVKNF 222
                  G ++AWG+V+QG+  E   P CYLLKTS++  G G  VGL CTHFCLVRV  F
Sbjct: 183 IGEAEADGVTRAWGVVIQGKGAEC-PPACYLLKTSTAMAGSGFGVGLGCTHFCLVRVNGF 242

[Close]

BLAST of CmoCh04G029920 vs. TrEMBL
Match: B9IQ58_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08630g PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40
Identity = 97/188 (51.60%), Postives = 129/188 (68.62%), Query Frame = 1


Query: 41  RFRKSRTHISSMKSLQPVKGHVK------GRKKGNEAISRDKLDKWMKESVVEIVKNLRE 100
           RFR+ R  +S MKS+    G VK      G KK   A+  +K+++WM++SVVEIV NLRE
Sbjct: 43  RFRRGRVSMS-MKSIT-TPGIVKTADSSDGNKKS--AVLYEKVEQWMRDSVVEIVNNLRE 102

Query: 101 APLFLRWYTTEDGKGARLETEKAVEEDRWRTLEEQWKNGEARTPEGIIFVQEL---EEED 160
           APL +  Y  E G    L+TEK V E++W  L E+W+  E + P+G+IFV++L   EEE+
Sbjct: 103 APLLVHVYAEESGGMTVLKTEKEVAEEKWPGLMERWEKRETQLPDGVIFVEKLEDGEEEE 162

Query: 161 YEGESKAWGIVVQGRCVERGAPVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQ 220
            +  ++AWGIVVQGR V+ G PVCYLLKTS    G G+GL CTHFCL++V++FRET +SQ
Sbjct: 163 EDAITRAWGIVVQGRGVDCG-PVCYLLKTSRVGAGPGLGLCCTHFCLMKVQSFRETARSQ 222

[Close]

BLAST of CmoCh04G029920 vs. TrEMBL
Match: B9S4G4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690120 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40
Identity = 103/235 (43.83%), Postives = 137/235 (58.30%), Query Frame = 1


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVA---FPGRFRKSRTHISSMKSLQP 60
           MAS++IRC    +     Y+  PD  +   +P SL     F     K     SS  S++ 
Sbjct: 1   MASISIRCQHTSNFFSGNYSPPPDRNNAPVAPSSLAISRDFDVSKWKRWRICSSAASMKA 60

Query: 61  VKGHVKGRKKGNEAISR--------DKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKG 120
           ++ H       N   +R        +KLDKWM  SV EIVKNL+EAPL +  Y  ++   
Sbjct: 61  IEKHRAIGSDDNNTSTRNNKATVVYEKLDKWMHSSVAEIVKNLKEAPLLVHVYDKDETTT 120

Query: 121 ARLETEKAVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGE---SKAWGIVVQGR 180
           A L TEK+V+ + W    E+WK  E   PEG+IFV+ L+EED E +   ++AWG+VVQG+
Sbjct: 121 A-LTTEKSVQVENWGAALEKWKKKEIPLPEGVIFVERLDEEDEEEKEQITRAWGVVVQGK 180

Query: 181 CVERGAPVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
             E G PVCYLLKTS   G G  G+ CTH+CL+RV++FRET  SQLKNCWL+Q Q
Sbjct: 181 EAECG-PVCYLLKTSRVAGSGFGGMCCTHYCLMRVQSFRETALSQLKNCWLIQGQ 233

[Close]

BLAST of CmoCh04G029920 vs. TAIR10
Match: AT3G56360.1 (AT3G56360.1 unknown protein)

HSP 1 Score: 161.4 bits (407), Expect = 6.4e-40
Identity = 95/217 (43.78%), Postives = 129/217 (59.45%), Query Frame = 1


Query: 26  CDQKA---SPRSLVAFPGRFRKSRTHIS----SMKSLQPVKGHVK-----GRKKGNEAIS 85
           CD++    + RS    P   R++   I     SM+ L P    VK     GRK+G   +S
Sbjct: 19  CDRRTLNLNSRSSCVVPVTNRRNMCAIGKISMSMEDLSPPSAAVKIERIGGRKRGGSVVS 78

Query: 86  RDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEEDRWRTLEEQWKNG 145
           R+KLD W+++SVVEIVKNLRE+PL +  Y   +G      T    E+  W  +E +W  G
Sbjct: 79  REKLDVWLRDSVVEIVKNLRESPLLMHLYAEANGGLTTTATNPKAED--WTEMEGKWGRG 138

Query: 146 EARTPEGIIFVQEL------EEEDYEG-----ESKAWGIVVQGRCVERGAPVCYLLKTSS 205
           E RTPEG+I V++L      +++D++G     ++ AWGIV QGR  + G PVCYLLKT+ 
Sbjct: 139 EERTPEGVILVEKLADGDIADDDDHDGGACGEDTSAWGIVAQGRGSDTG-PVCYLLKTTR 198

Query: 206 SRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQ 220
            R   G+G  CTHFCLV+VK+FRET  SQL N WL+Q
Sbjct: 199 VR--SGMGTVCTHFCLVKVKSFRETAMSQLNNSWLVQ 230

[Close]

BLAST of CmoCh04G029920 vs. TAIR10
Match: AT5G05250.1 (AT5G05250.1 unknown protein)

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-38
Identity = 85/172 (49.42%), Postives = 113/172 (65.70%), Query Frame = 1


Query: 64  GRKKGNE---AISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAVEE 123
           GR +G+       R+KLD+WMKESV EIVKNL EAPL +  YT +  +G    T   ++ 
Sbjct: 73  GRSRGDRWEVEAEREKLDRWMKESVTEIVKNLSEAPLLVHLYTGDKEEG----TVVVMKA 132

Query: 124 DRWRTLEEQWKNGEARTPEGIIFVQEL---EEE-----DYEGESKAWGIVVQGRCVERGA 183
           + W  ++ +W+ GEA  PEGI+FV++L   EE      D    ++AWG+VVQGR VE G 
Sbjct: 133 EEWAAVKGRWERGEAEMPEGIVFVEQLGAAEESCGCGFDGGDGTRAWGLVVQGRGVECG- 192

Query: 184 PVCYLLKT----SSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQN 221
           PVCYLLKT    S S  G G+G+ CTHFCL +V +FRET++SQL+NCWL+ N
Sbjct: 193 PVCYLLKTTRVGSGSGSGSGLGMRCTHFCLAKVSSFRETSESQLRNCWLVGN 239

[Close]

BLAST of CmoCh04G029920 vs. NCBI nr
Match: gi|659113834|ref|XP_008456777.1| (PREDICTED: uncharacterized protein LOC103496620 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.9e-73
Identity = 157/238 (65.97%), Postives = 177/238 (74.37%), Query Frame = 1


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKA--SPRSLVAFPGRFRKSRTHISSMKSLQPV 60
           MASL IRCG N   L     N+ +GCD KA   PRSLV    R RKSR++I++MKSL+PV
Sbjct: 1   MASLGIRCGGNCGVL-----NLNNGCDHKAFPPPRSLVLSTARLRKSRSYITAMKSLEPV 60

Query: 61  KGHVKGRKKGN-EAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKA 120
                 RK GN E ISR+KLD+WMKESVV+IVKNLREAPLF+R+Y  E+GK AR ETEK 
Sbjct: 61  NR----RKNGNDEVISREKLDEWMKESVVDIVKNLREAPLFVRFYK-ENGKTARFETEKG 120

Query: 121 VEEDRWRTLEEQWKNGEARTPEGIIFVQELEEED--------------YEGESKAWGIVV 180
           VEE RW  LE+QWKNG   TPEGIIFVQ+LEEE+               EGESKAWGIVV
Sbjct: 121 VEEYRWPVLEKQWKNGAEPTPEGIIFVQKLEEEEEEEEEEEEGEEEVEMEGESKAWGIVV 180

Query: 181 QGRCVERGAPVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           QGR VERGAPVCYLLKTS +    G+GLWCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Sbjct: 181 QGRGVERGAPVCYLLKTSRA---AGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 225

[Close]

BLAST of CmoCh04G029920 vs. NCBI nr
Match: gi|778709689|ref|XP_011656439.1| (PREDICTED: uncharacterized protein LOC105435745 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 4.6e-72
Identity = 149/230 (64.78%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKA--SPRSLVAFPGRFRKSRTHISSMKSLQPV 60
           MAS  IRCG N   L     N+ DGCD K    PRS+VA   R RK R++I++MKSL+PV
Sbjct: 1   MASFGIRCGGNCGVL-----NLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPV 60

Query: 61  KGHVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKAV 120
              ++ +   +E IS + LD+WMKESVV+IVKNLREAPLF+R+Y  E+GK AR ETEKAV
Sbjct: 61  ---IRRKNVDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYK-ENGKTARFETEKAV 120

Query: 121 EEDRWRTLEEQWKNGEARTPEGIIFVQELEEE-------DYEGESKAWGIVVQGRCVERG 180
           EEDRW  LE QWKNG   TPEGIIFVQ+LE+E       + EGE KAWGIVVQGR VERG
Sbjct: 121 EEDRWPILENQWKNGAEATPEGIIFVQKLEDEEEEEEEVEMEGEPKAWGIVVQGRGVERG 180

Query: 181 APVCYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           APVCYLLKTS +    G+GLWCTHFCLVRVKNFRETTKSQL+NCWL+QNQ
Sbjct: 181 APVCYLLKTSRA---AGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 218

[Close]

BLAST of CmoCh04G029920 vs. NCBI nr
Match: gi|658048521|ref|XP_008359947.1| (PREDICTED: uncharacterized protein LOC103423635 [Malus domestica])

HSP 1 Score: 182.6 bits (462), Expect = 7.6e-43
Identity = 112/237 (47.26%), Postives = 145/237 (61.18%), Query Frame = 1


Query: 1   MASLAIRCGRNFSA-LDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMKSLQPVK 60
           MASL ++ G N +A LDH   N    C       S++   G  R S     +   L+ V 
Sbjct: 113 MASLGVQFGGNNNAVLDHRRQNSLCICSPSKQSVSMIRGSGGKRGSEVLAMAGAGLEAV- 172

Query: 61  GHVKGRKKGNEAISR--DKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEKA 120
           G  + R  G++A +   +KLD+WM+ESVVEIVKNLREAPL +  Y        RLETEK 
Sbjct: 173 GRERRRGGGSDAAAAAYEKLDEWMRESVVEIVKNLREAPLLVNVYGRSTDGRPRLETEKR 232

Query: 121 VEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGE---------SKAWGIVVQGRCV 180
           VEE+ W  L  +W+ G A  P+G+IFV+EL++++ +G          ++AWG+VVQGR  
Sbjct: 233 VEEENWDGLRRKWEAGVAPFPDGVIFVEELDDDNGDGSGNDERGDAITRAWGLVVQGR-G 292

Query: 181 ERGAPVCYLLKTS---SSRGGG-GVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           E  AP CYLLKTS   S  G G G+GL CTHFCLVRV +FRE  +SQLKNCWLLQ+Q
Sbjct: 293 EESAPACYLLKTSKVDSGPGFGLGMGLGCTHFCLVRVNSFREKAQSQLKNCWLLQSQ 347

[Close]

BLAST of CmoCh04G029920 vs. NCBI nr
Match: gi|802778425|ref|XP_012091143.1| (PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas])

HSP 1 Score: 181.4 bits (459), Expect = 1.7e-42
Identity = 109/227 (48.02%), Postives = 145/227 (63.88%), Query Frame = 1


Query: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60
           MAS+ IRC  N   L     N+    +    P S VA       S+     MK+   +K 
Sbjct: 1   MASVGIRCQGNCHFL-----NLRGPENSPVGPCS-VAISAGSDSSKLKRWRMKAAMTIKK 60

Query: 61  H-----VKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETE 120
           +            N A+  +KLD+WMK+SVVEIVKNLREAPL ++ Y  + G+   L+TE
Sbjct: 61  NENMISTSDSAAANAAVVYEKLDEWMKDSVVEIVKNLREAPLLVQVY--DKGETTALKTE 120

Query: 121 KAVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEG-ESKAWGIVVQGRCVERGAPV 180
           KAVEE+ W T++E+W   E   PEG+IFV++L+EED E   ++AWGIVVQG+ V+ G PV
Sbjct: 121 KAVEEETWSTVKEKWGKRETPLPEGVIFVEQLDEEDPEEITTRAWGIVVQGKGVDCG-PV 180

Query: 181 CYLLKTSSSRGGGGVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           CYLLKTS  R G G+G +CTHFCL++VK+FRE+T+SQLKN WLL+ Q
Sbjct: 181 CYLLKTS--RVGSGLGAFCTHFCLMKVKSFRESTRSQLKNFWLLEGQ 216

[Close]

BLAST of CmoCh04G029920 vs. NCBI nr
Match: gi|694445245|ref|XP_009349079.1| (PREDICTED: uncharacterized protein LOC103940649 [Pyrus x bretschneideri])

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 112/240 (46.67%), Postives = 146/240 (60.83%), Query Frame = 1


Query: 1   MASLAIRCGRNFSA-LDHPYANVPDGCDQKASPR-SLVAFPGRFRKSRTHISSMKSLQPV 60
           MASL ++ GRN +  LDH   N    C   +    S++   G  R S     +   L+ +
Sbjct: 1   MASLGVQFGRNNNTVLDHRRQNSLCICSPSSKQTVSMIRGCGGKRGSEVLAMAGAGLEAL 60

Query: 61  KGHVKGRKKGNEAISR--DKLDKWMKESVVEIVKNLREAPLFLRWYTTEDGKGARLETEK 120
            G  + R  G++A +   +KLD+WM+ESVVEIVKNLREAPL +  Y        RLETEK
Sbjct: 61  -GRERRRGGGSDAAAAAYEKLDEWMRESVVEIVKNLREAPLLVNVYGRSTDGRPRLETEK 120

Query: 121 AVEEDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYEGE-----------SKAWGIVVQG 180
            VEE+ W  L  +W+ G A  P+G+IFV+EL++++ +GE           ++AWG+VVQG
Sbjct: 121 RVEEENWDGLRRKWEAGVAPFPDGVIFVEELDDDNGDGEGSGNNEGGDAITRAWGLVVQG 180

Query: 181 RCVERGAPVCYLLKTS---SSRGGG-GVGLWCTHFCLVRVKNFRETTKSQLKNCWLLQNQ 222
           R  E  AP CYLLKTS   S  G G G+GL CTHFCLVRV +FRE  +SQLKNCWLLQ Q
Sbjct: 181 R-GEESAPACYLLKTSKVDSGPGFGLGMGLGCTHFCLVRVSSFREKAQSQLKNCWLLQAQ 238

The following BLAST results are available for this feature:

BLAST of CmoCh04G029920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G029920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDH4_CUCSA	3.2e-72	64.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014570 PE=4 SV=1	[more]
A0A067JQ58_JATCU	1.2e-42	48.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03320 PE=4 SV=1	[more]
W9RLD7_9ROSA	3.8e-41	42.41	Uncharacterized protein OS=Morus notabilis GN=L484_011243 PE=4 SV=1	[more]
B9IQ58_POPTR	1.5e-40	51.60	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08630g PE=4 SV=1	[more]
B9S4G4_RICCO	1.9e-40	43.83	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690120 PE=4 SV=1	[more]

BLAST of CmoCh04G029920 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56360.1	6.4e-40	43.78	unknown protein	[more]
AT5G05250.1	4.6e-38	49.42	unknown protein	[more]

BLAST of CmoCh04G029920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113834\|ref\|XP_008456777.1\|	1.9e-73	65.97	PREDICTED: uncharacterized protein LOC103496620 [Cucumis melo]	[more]
gi\|778709689\|ref\|XP_011656439.1\|	4.6e-72	64.78	PREDICTED: uncharacterized protein LOC105435745 [Cucumis sativus]	[more]
gi\|658048521\|ref\|XP_008359947.1\|	7.6e-43	47.26	PREDICTED: uncharacterized protein LOC103423635 [Malus domestica]	[more]
gi\|802778425\|ref\|XP_012091143.1\|	1.7e-42	48.02	PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]	[more]
gi\|694445245\|ref\|XP_009349079.1\|	1.1e-41	46.67	PREDICTED: uncharacterized protein LOC103940649 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G029920.1	CmoCh04G029920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35127	FAMILY NOT NAMED	coord: 70..221 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G029920	Cucsa.325990	Cucumber (Gy14) v1	cgycmoB0903
CmoCh04G029920	CmaCh15G001670	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G029920	CmaCh04G028630	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G029920	Cla016423	Watermelon (97103) v1	cmowmB730
CmoCh04G029920	Csa6G014570	Cucumber (Chinese Long) v2	cmocuB759
CmoCh04G029920	MELO3C020007	Melon (DHL92) v3.5.1	cmomeB668
CmoCh04G029920	ClCG11G005670	Watermelon (Charleston Gray)	cmowcgB621
CmoCh04G029920	CSPI06G02160	Wild cucumber (PI 183967)	cmocpiB768
CmoCh04G029920	Lsi03G002630	Bottle gourd (USVL1VR-Ls)	cmolsiB645
CmoCh04G029920	Cp4.1LG13g07550	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G029920	MELO3C020007.2	Melon (DHL92) v3.6.1	cmomedB756
CmoCh04G029920	CsaV3_6G002310	Cucumber (Chinese Long) v3	cmocucB0899
CmoCh04G029920	Cla97C11G212600	Watermelon (97103) v2	cmowmbB697
CmoCh04G029920	Carg05939	Silver-seed gourd	carcmoB0033
CmoCh04G029920	Carg02158	Silver-seed gourd	carcmoB0370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G029920	Silver-seed gourd	carcmoB0863
CmoCh04G029920	Cucumber (Chinese Long) v3	cmocucB0838
CmoCh04G029920	Watermelon (97103) v2	cmowmbB723
CmoCh04G029920	Wax gourd	cmowgoB0857
CmoCh04G029920	Wax gourd	cmowgoB0879
CmoCh04G029920	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh04G029920	Cucurbita moschata (Rifu)	cmocmoB449
CmoCh04G029920	Cucumber (Gy14) v1	cgycmoB0350
CmoCh04G029920	Cucurbita maxima (Rimu)	cmacmoB659
CmoCh04G029920	Wild cucumber (PI 183967)	cmocpiB719
CmoCh04G029920	Cucumber (Chinese Long) v2	cmocuB709
CmoCh04G029920	Melon (DHL92) v3.5.1	cmomeB701
CmoCh04G029920	Watermelon (Charleston Gray)	cmowcgB650
CmoCh04G029920	Watermelon (97103) v1	cmowmB714
CmoCh04G029920	Cucurbita pepo (Zucchini)	cmocpeB654
CmoCh04G029920	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G029920	Bottle gourd (USVL1VR-Ls)	cmolsiB629
CmoCh04G029920	Cucumber (Gy14) v2	cgybcmoB525
CmoCh04G029920	Cucumber (Gy14) v2	cgybcmoB816