CsaV3_6G002310 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G002310
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionSorghum bicolor protein targeted either to mitochondria or chloroplast proteins T50848
Locationchr6 : 1589795 .. 1591365 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATCGAATTAAAAAAGAAAAAGAAAAAGAAAATCCAAAATTGACCATTTAAATTGGGAAGAATTTAGATTTTCGTTTTCGAGTAACGCGATTGGTGTAATCCTTTTCGGAAAAGAAAATCTTGATTAATCCTTTTCGGAATAGAAAATGTTGATTTAATCCTTTCGATTTAACCAGTCTCGTTGCCTCCTCCACCGGCGCCGTCGTTGTTTGAATCAATCACAATCAGACTTTCAGCCCAAAAGCGATTTCAAGAATTATTAGGGAAGGCAATCAATCGTCTTCCCCATCCTTTCATTCTTCTTTAATTCGTCTCTCCACTCCAACCCAATCCAATGGCTTCTTTTGGAATTCGATGTGGAGGAAATTGCGGTGTGTTGAATCTTAACGACGGATGCGATCACAAACCATTCCCTCCTCCTCGTTCTGTAGTCGCTTCCACCGCAAGATTAAGGAAACCAAGGAGTTACATTACCGCGATGAAGAGTTTAGAGCCGGTGATTAGAAGAAAAAACGTAGACGATGAAGTAATCTCATGCGAGAATTTAGATGAATGGATGAAGGAATCAGTGGTTGACATTGTGAAGAATCTTCGAGAAGCACCTCTGTTTGTAAGATTTTACAAAGAGAACGGGAAAACGGCGAGATTCGAAACGGAGAAGGCGGTGGAGGAAGATAGATGGCCCATCTTGGAAAATCAATGGAAAAACGGAGCAGAAGCGACGCCGGAAGGGATCATATTCGTACAAAAGCTTGAAGACGAAGAAGAAGAAGAAGAAGAAGTTGAGATGGAAGGGGAACCGAAGGCGTGGGGGATTGTAGTACAAGGGAGAGGAGTTGAAAGAGGAGCACCGGTGTGTTACTTGTTGAAGACGAGTAGAGCGGCTGGGTTAGGGCTATGGTGTACGCATTTCTGCTTGGTTAGGGTTAAGAATTTCAGAGAGACGACGAAATCGCAGCTTCAAAATTGTTGGTTGATGCAGAATCAATAAAGAAGAAGAACAGTGGCGGTTCAATGGTTAGATACACTCATAATTTCAAATTCAATACTCAACGTGAAGTAATTGTTCATAGTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAGTTTGTGTTCTTTTGATAGAAAAGGAATATCGAAATACTTTGGGTGAGGATGAAGGAGGAGAGGGATAGTTAGTTATTTTATTTTTCATTTTTTTTATTGTTAATTATTTAGTTATATATAATATCTAATTAGTTATTTCCAAACTATACCTATGCTCATCTCTCACTCTTTTGGATTTGGATTACTTGAAGTGGTGGACACTCTAAATCTTTTTTAATACTTCCTTTAGGTGTTGGAGATGCAATAGTGTTACTAGTAAACAAAACTCTATTTTACAAATAAATATTGTTATTGAATTACTCTATTTTACAAACAAATATTGTTATCATTGATAAAATCAAATTATATATTTGATATATTTAAAATTATGCTTTAATCCGATCTACACTATCATACTAATTTTATTTTAATAAAACTATCTTTTACAAACTATAGTTTACTTCAACGCATGTTGGTATGAACGAAC

mRNA sequence

ATGGCTTCTTTTGGAATTCGATGTGGAGGAAATTGCGGTGTGTTGAATCTTAACGACGGATGCGATCACAAACCATTCCCTCCTCCTCGTTCTGTAGTCGCTTCCACCGCAAGATTAAGGAAACCAAGGAGTTACATTACCGCGATGAAGAGTTTAGAGCCGGTGATTAGAAGAAAAAACGTAGACGATGAAGTAATCTCATGCGAGAATTTAGATGAATGGATGAAGGAATCAGTGGTTGACATTGTGAAGAATCTTCGAGAAGCACCTCTGTTTGTAAGATTTTACAAAGAGAACGGGAAAACGGCGAGATTCGAAACGGAGAAGGCGGTGGAGGAAGATAGATGGCCCATCTTGGAAAATCAATGGAAAAACGGAGCAGAAGCGACGCCGGAAGGGATCATATTCGTACAAAAGCTTGAAGACGAAGAAGAAGAAGAAGAAGAAGTTGAGATGGAAGGGGAACCGAAGGCGTGGGGGATTGTAGTACAAGGGAGAGGAGTTGAAAGAGGAGCACCGGTGTGTTACTTGTTGAAGACGAGTAGAGCGGCTGGGTTAGGGCTATGGTGTACGCATTTCTGCTTGGTTAGGGTTAAGAATTTCAGAGAGACGACGAAATCGCAGCTTCAAAATTGTTGGTTGATGCAGAATCAATAA

Coding sequence (CDS)

ATGGCTTCTTTTGGAATTCGATGTGGAGGAAATTGCGGTGTGTTGAATCTTAACGACGGATGCGATCACAAACCATTCCCTCCTCCTCGTTCTGTAGTCGCTTCCACCGCAAGATTAAGGAAACCAAGGAGTTACATTACCGCGATGAAGAGTTTAGAGCCGGTGATTAGAAGAAAAAACGTAGACGATGAAGTAATCTCATGCGAGAATTTAGATGAATGGATGAAGGAATCAGTGGTTGACATTGTGAAGAATCTTCGAGAAGCACCTCTGTTTGTAAGATTTTACAAAGAGAACGGGAAAACGGCGAGATTCGAAACGGAGAAGGCGGTGGAGGAAGATAGATGGCCCATCTTGGAAAATCAATGGAAAAACGGAGCAGAAGCGACGCCGGAAGGGATCATATTCGTACAAAAGCTTGAAGACGAAGAAGAAGAAGAAGAAGAAGTTGAGATGGAAGGGGAACCGAAGGCGTGGGGGATTGTAGTACAAGGGAGAGGAGTTGAAAGAGGAGCACCGGTGTGTTACTTGTTGAAGACGAGTAGAGCGGCTGGGTTAGGGCTATGGTGTACGCATTTCTGCTTGGTTAGGGTTAAGAATTTCAGAGAGACGACGAAATCGCAGCTTCAAAATTGTTGGTTGATGCAGAATCAATAA

Protein sequence

MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKNVDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILENQWKNGAEATPEGIIFVQKLEDEEEEEEEVEMEGEPKAWGIVVQGRGVERGAPVCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ
Homology
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BLAST of CsaV3_6G002310 vs. NCBI nr
Match: XP_011656439.1 (PREDICTED: uncharacterized protein LOC105435745 [Cucumis sativus] >KGN45836.1 hypothetical protein Csa_6G014570 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 1.3e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60
           MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN
Sbjct: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60

Query: 61  VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE 120
           VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE
Sbjct: 61  VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE 120

Query: 121 NQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKT 180
           NQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKT
Sbjct: 121 NQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKT 180

Query: 181 SRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           SRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ
Sbjct: 181 SRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 218

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BLAST of CsaV3_6G002310 vs. NCBI nr
Match: XP_008456777.1 (PREDICTED: uncharacterized protein LOC103496620 [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 7.7e-100
Identity = 199/225 (88.44%), Postives = 203/225 (90.22%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60
           MAS GIRCGGNCGVLNLN+GCDHK FPPPRS+V STARLRK RSYITAMKSLEPV RRKN
Sbjct: 1   MASLGIRCGGNCGVLNLNNGCDHKAFPPPRSLVLSTARLRKSRSYITAMKSLEPVNRRKN 60

Query: 61  VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE 120
            +DEVIS E LDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEK VEE RWP+LE
Sbjct: 61  GNDEVISREKLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKGVEEYRWPVLE 120

Query: 121 NQWKNGAEATPEGIIFVQKLE-------DXXXXXXXXXXXXXPKAWGIVVQGRGVERGAP 180
            QWKNGAE TPEGIIFVQKLE        XXXXXXXXXXXXX  AWGIVVQGRGVERGAP
Sbjct: 121 KQWKNGAEPTPEGIIFVQKLEXXXXXXXXXXXXXXXXXXXXXXXAWGIVVQGRGVERGAP 180

Query: 181 VCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           VCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ
Sbjct: 181 VCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 225

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BLAST of CsaV3_6G002310 vs. NCBI nr
Match: XP_023549554.1 (uncharacterized protein LOC111808023 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.1 bits (775), Expect = 7.5e-79
Identity = 156/228 (68.42%), Postives = 177/228 (77.63%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVL-----NLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPV 60
           MAS GIRCGGNCGVL     N++DGCD K    PRS+  ST  LRK  S ++ MKSL+PV
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAC--PRSLAVSTGGLRKSSSSVSTMKSLQPV 60

Query: 61  IR---RKNVDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFY--KENGKTARFETEKA 120
           IR    +   +EVIS +  DEWMKESVV+IVKNLREAPLF+R Y   E+G+ ARFETEKA
Sbjct: 61  IRHVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKA 120

Query: 121 VEEDRWPILENQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVER 180
           VEEDRWPILE QWK+G+  TPEGI+FV++LED              KAWGIV+QGRGVER
Sbjct: 121 VEEDRWPILEKQWKSGSAPTPEGIMFVEELED------EDYEDGESKAWGIVIQGRGVER 180

Query: 181 GAPVCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           GAPVCYLLKTSRAAGLG+WCTHFCLVRVKNFRETTKSQLQNCWL+QNQ
Sbjct: 181 GAPVCYLLKTSRAAGLGMWCTHFCLVRVKNFRETTKSQLQNCWLVQNQ 220

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BLAST of CsaV3_6G002310 vs. NCBI nr
Match: XP_022938776.1 (uncharacterized protein LOC111444891 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 8.3e-78
Identity = 153/228 (67.11%), Postives = 177/228 (77.63%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVL-----NLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPV 60
           MAS GIRCGGNCGVL     N++DGCD K    PRS+  ST  LRK  S ++ +KSL+PV
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQK--AGPRSLAVSTGGLRKSSSSVSILKSLQPV 60

Query: 61  ---IRRKNVDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFY--KENGKTARFETEKA 120
              ++ +   +EVIS +  DEWMKESVV+IVKNLREAPLF+R Y   E+G+ ARFETEKA
Sbjct: 61  NRHVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKA 120

Query: 121 VEEDRWPILENQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVER 180
           VEEDRWPILE QWK+G+  TPEGI+FV++LED              KAWGIV+QGRGVER
Sbjct: 121 VEEDRWPILEKQWKSGSTPTPEGIMFVEELED------EDYEDGESKAWGIVIQGRGVER 180

Query: 181 GAPVCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           GAPVCYLLKTSRAAGLG+WCTHFCLVRVKNFRETTKSQLQNCWL+QNQ
Sbjct: 181 GAPVCYLLKTSRAAGLGMWCTHFCLVRVKNFRETTKSQLQNCWLVQNQ 220

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BLAST of CsaV3_6G002310 vs. NCBI nr
Match: XP_022993514.1 (uncharacterized protein LOC111489497 [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77
Identity = 154/228 (67.54%), Postives = 176/228 (77.19%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVL-----NLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPV 60
           MAS GIRCGGNCGVL     N++DGCD K    PRS+  ST  LRK  S ++ MKSL+ V
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQK--AGPRSLAVSTGGLRKSSSSVSTMKSLQSV 60

Query: 61  ---IRRKNVDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFY--KENGKTARFETEKA 120
              ++ +   +EVIS +  DEWMKESVV+IVKNLREAPLF+R Y   E+G+ ARFETEKA
Sbjct: 61  NRHVKDRTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKA 120

Query: 121 VEEDRWPILENQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVER 180
           VEEDRWPILE QWK+GA  TPEGI+FV++LED              KAWGIV+QGRGVER
Sbjct: 121 VEEDRWPILEKQWKSGAAPTPEGIMFVEELED------EDYEDGESKAWGIVIQGRGVER 180

Query: 181 GAPVCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           GAPVCYLLKTSRAAGLG+WCTHFCLVRVKNFRETTKSQLQNCWL+QNQ
Sbjct: 181 GAPVCYLLKTSRAAGLGMWCTHFCLVRVKNFRETTKSQLQNCWLVQNQ 220

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BLAST of CsaV3_6G002310 vs. TAIR10
Match: AT3G56360.1 (unknown protein)

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-35
Identity = 79/158 (50.00%), Postives = 98/158 (62.03%), Query Frame = 0 

Query: 65  VISCENLDEWMKESVVDIVKNLREAPLFVRFYKE-NGKTARFETEKAVEEDRWPILENQW 124
           V+S E LD W+++SVV+IVKNLRE+PL +  Y E NG      T    E+  W  +E +W
Sbjct: 76  VVSREKLDVWLRDSVVEIVKNLRESPLLMHLYAEANGGLTTTATNPKAED--WTEMEGKW 135

Query: 125 KNGAEATPEGIIFVQKLED----XXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLK 184
             G E TPEG+I V+KL D                   AWGIV QGRG + G PVCYLLK
Sbjct: 136 GRGEERTPEGVILVEKLADGDIADDDDHDGGACGEDTSAWGIVAQGRGSDTG-PVCYLLK 195

Query: 185 TSRA-AGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQ 217
           T+R  +G+G  CTHFCLV+VK+FRET  SQL N WL+Q
Sbjct: 196 TTRVRSGMGTVCTHFCLVKVKSFRETAMSQLNNSWLVQ 230

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BLAST of CsaV3_6G002310 vs. TAIR10
Match: AT5G05250.1 (unknown protein)

HSP 1 Score: 135.2 bits (339), Expect = 4.9e-32
Identity = 74/160 (46.25%), Postives = 94/160 (58.75%), Query Frame = 0 

Query: 69  ENLDEWMKESVVDIVKNLREAPLFVRFY---KENGKTARFETEKAVEEDRWPILENQWKN 128
           E LD WMKESV +IVKNL EAPL V  Y   KE G      T   ++ + W  ++ +W+ 
Sbjct: 87  EKLDRWMKESVTEIVKNLSEAPLLVHLYTGDKEEG------TVVVMKAEEWAAVKGRWER 146

Query: 129 GAEATPEGIIFVQKL-EDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKTSRAA 188
           G    PEGI+FV++L                 +AWG+VVQGRGVE G PVCYLLKT+R  
Sbjct: 147 GEAEMPEGIVFVEQLGAAEESCGCGFDGGDGTRAWGLVVQGRGVECG-PVCYLLKTTRVG 206

Query: 189 GLGLW-------CTHFCLVRVKNFRETTKSQLQNCWLMQN 218
                       CTHFCL +V +FRET++SQL+NCWL+ N
Sbjct: 207 XXXXXXXXXXXRCTHFCLAKVSSFRETSESQLRNCWLVGN 239

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BLAST of CsaV3_6G002310 vs. TrEMBL
Match: tr|A0A0A0KDH4|A0A0A0KDH4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014570 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 8.6e-116
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60
           MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN
Sbjct: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60

Query: 61  VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE 120
           VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE
Sbjct: 61  VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE 120

Query: 121 NQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKT 180
           NQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKT
Sbjct: 121 NQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGAPVCYLLKT 180

Query: 181 SRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           SRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ
Sbjct: 181 SRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 218

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BLAST of CsaV3_6G002310 vs. TrEMBL
Match: tr|A0A1S3C411|A0A1S3C411_CUCME (uncharacterized protein LOC103496620 OS=Cucumis melo OX=3656 GN=LOC103496620 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 5.1e-100
Identity = 199/225 (88.44%), Postives = 203/225 (90.22%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60
           MAS GIRCGGNCGVLNLN+GCDHK FPPPRS+V STARLRK RSYITAMKSLEPV RRKN
Sbjct: 1   MASLGIRCGGNCGVLNLNNGCDHKAFPPPRSLVLSTARLRKSRSYITAMKSLEPVNRRKN 60

Query: 61  VDDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVEEDRWPILE 120
            +DEVIS E LDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEK VEE RWP+LE
Sbjct: 61  GNDEVISREKLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKGVEEYRWPVLE 120

Query: 121 NQWKNGAEATPEGIIFVQKLE-------DXXXXXXXXXXXXXPKAWGIVVQGRGVERGAP 180
            QWKNGAE TPEGIIFVQKLE        XXXXXXXXXXXXX  AWGIVVQGRGVERGAP
Sbjct: 121 KQWKNGAEPTPEGIIFVQKLEXXXXXXXXXXXXXXXXXXXXXXXAWGIVVQGRGVERGAP 180

Query: 181 VCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           VCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ
Sbjct: 181 VCYLLKTSRAAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 225

[Close]
BLAST of CsaV3_6G002310 vs. TrEMBL
Match: tr|A0A067JQ58|A0A067JQ58_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_03320 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 103/227 (45.37%), Postives = 146/227 (64.32%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSVVASTARLRKPRSYITAMKSLEPVIRRKN 60
           MAS GIRC GNC  LNL  G ++ P  P    +++ +   K + +   MK+   + + +N
Sbjct: 1   MASVGIRCQGNCHFLNLR-GPENSPVGPCSVAISAGSDSSKLKRW--RMKAAMTIKKNEN 60

Query: 61  V--------DDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETEKAVE 120
           +         +  +  E LDEWMK+SVV+IVKNLREAPL V+ Y + G+T   +TEKAVE
Sbjct: 61  MISTSDSAAANAAVVYEKLDEWMKDSVVEIVKNLREAPLLVQVY-DKGETTALKTEKAVE 120

Query: 121 EDRWPILENQWKNGAEATPEGIIFVQKLEDXXXXXXXXXXXXXPKAWGIVVQGRGVERGA 180
           E+ W  ++ +W       PEG+IFV++L++              +AWGIVVQG+GV+ G 
Sbjct: 121 EETWSTVKEKWGKRETPLPEGVIFVEQLDE------EDPEEITTRAWGIVVQGKGVDCG- 180

Query: 181 PVCYLLKTSR-AAGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           PVCYLLKTSR  +GLG +CTHFCL++VK+FRE+T+SQL+N WL++ Q
Sbjct: 181 PVCYLLKTSRVGSGLGAFCTHFCLMKVKSFRESTRSQLKNFWLLEGQ 216

[Close]
BLAST of CsaV3_6G002310 vs. TrEMBL
Match: tr|A0A2C9VN12|A0A2C9VN12_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G143600 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42
Identity = 118/234 (50.43%), Postives = 157/234 (67.09%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSV------VASTARLRKPRSYITAMKS--L 60
           MAS GIRC GN   +N     + +P      V      + + +R ++ R+   +M +   
Sbjct: 1   MASAGIRCHGNQHFINTRWPGNTQPINQNARVGLCSLAIDACSRRKQWRNCSVSMGTGMG 60

Query: 61  EPVIRRKNV----DDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETE 120
             V + KN     DD  +  E +DEWMK+SVV+IVKNLREAPL V+ Y + G+T   +TE
Sbjct: 61  MAVTKHKNKINDGDDVAVVYEKMDEWMKDSVVEIVKNLREAPLLVQVY-DKGETTTLKTE 120

Query: 121 KAVEEDRWPILENQWKNGAEATPEGIIFVQKLE--DXXXXXXXXXXXXXPKAWGIVVQGR 180
           KAVEE+ WP++  +W       PEG+IFV++LE   XXXXXXXXXXXXX +AWG+V+QG+
Sbjct: 121 KAVEEETWPLVMERWGKREAPLPEGLIFVEQLEXXXXXXXXXXXXXXXXTRAWGVVIQGK 180

Query: 181 GVERGAPVCYLLKTSRA--AGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           GV+ G PVCYLLKTSRA  +G+G  CTHFCL+RVKNFRE+ +SQL+NCWL+Q Q
Sbjct: 181 GVDCG-PVCYLLKTSRARSSGMGACCTHFCLMRVKNFRESARSQLKNCWLLQGQ 232

[Close]
BLAST of CsaV3_6G002310 vs. TrEMBL
Match: tr|A0A2C9VLB1|A0A2C9VLB1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G141000 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.0e-41
Identity = 117/234 (50.00%), Postives = 155/234 (66.24%), Query Frame = 0 

Query: 1   MASFGIRCGGNCGVLNLNDGCDHKPFPPPRSV------VASTARLRKPRSYITAMKS--L 60
           MAS GIRC GN   +N     + +P      V      + + +R ++ R    +M +   
Sbjct: 1   MASAGIRCHGNHHFINSRWPGNTQPINQNARVGLCSLAIDACSRRKQWRICSVSMGTGMG 60

Query: 61  EPVIRRKNV----DDEVISCENLDEWMKESVVDIVKNLREAPLFVRFYKENGKTARFETE 120
             V + KN     DD  +  E +DEWMK+SVV+IVKNLREAPL V+   + G+T   +TE
Sbjct: 61  MAVTKHKNKINDGDDVAVVYEKMDEWMKDSVVEIVKNLREAPLLVQ-VDDKGETTTLKTE 120

Query: 121 KAVEEDRWPILENQWKNGAEATPEGIIFVQKLE--DXXXXXXXXXXXXXPKAWGIVVQGR 180
           KAVEE+ WP++  +W       PEG+IFV++LE   XXXXXXXXXXXXX +AWG+V+QG+
Sbjct: 121 KAVEEESWPLVMERWGKREAPLPEGLIFVEQLEXXXXXXXXXXXXXXXXTRAWGVVIQGK 180

Query: 181 GVERGAPVCYLLKTSRA--AGLGLWCTHFCLVRVKNFRETTKSQLQNCWLMQNQ 219
           GV+ G PVCYLLKTSRA  +G+G  CTHFCL+RVKNFRE+ +SQL+NCWL+Q Q
Sbjct: 181 GVDCG-PVCYLLKTSRARSSGMGACCTHFCLMRVKNFRESARSQLKNCWLLQGQ 232

The following BLAST results are available for this feature:
BLAST of CsaV3_6G002310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656439.11.3e-115100.00PREDICTED: uncharacterized protein LOC105435745 [Cucumis sativus] >KGN45836.1 hy... [more]
XP_008456777.17.7e-10088.44PREDICTED: uncharacterized protein LOC103496620 [Cucumis melo][more]
XP_023549554.17.5e-7968.42uncharacterized protein LOC111808023 [Cucurbita pepo subsp. pepo][more]
XP_022938776.18.3e-7867.11uncharacterized protein LOC111444891 [Cucurbita moschata][more]
XP_022993514.11.8e-7767.54uncharacterized protein LOC111489497 [Cucurbita maxima][more]
BLAST of CsaV3_6G002310 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56360.12.8e-3550.00unknown protein[more]
AT5G05250.14.9e-3246.25unknown protein[more]
BLAST of CsaV3_6G002310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G002310 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KDH4|A0A0A0KDH4_CUCSA8.6e-116100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014570 PE=4 SV=1[more]
tr|A0A1S3C411|A0A1S3C411_CUCME5.1e-10088.44uncharacterized protein LOC103496620 OS=Cucumis melo OX=3656 GN=LOC103496620 PE=... [more]
tr|A0A067JQ58|A0A067JQ58_JATCU1.5e-4345.37Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_03320 PE=4 SV=1[more]
tr|A0A2C9VN12|A0A2C9VN12_MANES2.8e-4250.43Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G143600 PE=4 SV=... [more]
tr|A0A2C9VLB1|A0A2C9VLB1_MANES7.0e-4150.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G141000 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G002310.1CsaV3_6G002310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35127FAMILY NOT NAMEDcoord: 57..218

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G002310CSPI06G02160Wild cucumber (PI 183967)cpicucB364
CsaV3_6G002310Cucsa.325990Cucumber (Gy14) v1cgycucB506
CsaV3_6G002310CmaCh15G001670Cucurbita maxima (Rimu)cmacucB0363
CsaV3_6G002310CmaCh04G028630Cucurbita maxima (Rimu)cmacucB0906
CsaV3_6G002310CmoCh04G029920Cucurbita moschata (Rifu)cmocucB0899
CsaV3_6G002310Cp4.1LG13g07550Cucurbita pepo (Zucchini)cpecucB0238
CsaV3_6G002310Carg05939Silver-seed gourdcarcucB0024
CsaV3_6G002310Carg02158Silver-seed gourdcarcucB0300
CsaV3_6G002310Cla016423Watermelon (97103) v1cucwmB559
CsaV3_6G002310MELO3C020007Melon (DHL92) v3.5.1cucmeB487
CsaV3_6G002310ClCG11G005670Watermelon (Charleston Gray)cucwcgB452
CsaV3_6G002310Lsi03G002630Bottle gourd (USVL1VR-Ls)cuclsiB473
CsaV3_6G002310MELO3C020007.2Melon (DHL92) v3.6.1cucmedB473
CsaV3_6G002310Cla97C11G212600Watermelon (97103) v2cucwmbB441
CsaV3_6G002310Bhi04G001794Wax gourdcucwgoB597
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G002310Cucumber (Chinese Long) v3cuccucB203
CsaV3_6G002310Silver-seed gourdcarcucB0711
CsaV3_6G002310Cucumber (Gy14) v2cgybcucB242
CsaV3_6G002310Cucumber (Gy14) v2cgybcucB298
CsaV3_6G002310Cucumber (Gy14) v1cgycucB218
CsaV3_6G002310Cucurbita maxima (Rimu)cmacucB0912
CsaV3_6G002310Cucurbita maxima (Rimu)cmacucB0913
CsaV3_6G002310Cucurbita moschata (Rifu)cmocucB0358
CsaV3_6G002310Cucurbita moschata (Rifu)cmocucB0903
CsaV3_6G002310Cucurbita pepo (Zucchini)cpecucB0569
CsaV3_6G002310Bottle gourd (USVL1VR-Ls)cuclsiB487
CsaV3_6G002310Watermelon (Charleston Gray)cucwcgB510
CsaV3_6G002310Watermelon (97103) v1cucwmB511
CsaV3_6G002310Watermelon (97103) v2cucwmbB500