CmoCh04G029920.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTCAGGAAATCGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAGAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAAACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTCAGGAAATCGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAGAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAAACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA ATGGCTTCGTTAGCAATTCGATGTGGAAGAAATTTCAGCGCATTGGATCATCCATACGCGAATGTTCCCGACGGATGTGATCAGAAAGCAAGTCCTCGTTCTTTGGTGGCTTTCCCCGGAAGATTCAGGAAATCGAGGACTCACATTTCTTCAATGAAGAGTTTGCAGCCAGTGAAAGGCCATGTGAAGGGGAGAAAGAAAGGCAATGAGGCGATTTCTCGCGATAAGCTCGATAAATGGATGAAGGAATCGGTGGTGGAAATTGTGAAGAATCTTCGAGAAGCGCCTCTGTTTTTGCGGTGGTACACGACGGAGGACGGCAAGGGAGCGAGATTGGAAACGGAGAAGGCGGTGGAGGAAGATCGTTGGAGAACGTTGGAGGAACAGTGGAAGAACGGAGAGGCGCGGACGCCGGAAGGAATCATATTCGTTCAAGAGCTTGAAGAGGAGGATTACGAAGGGGAATCGAAGGCGTGGGGGATTGTAGTACAAGGAAGATGCGTTGAACGTGGTGCGCCGGTTTGTTACTTGTTGAAGACGAGTAGTAGTAGGGGAGGGGGAGGGGTAGGGCTGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAACTTCAGAGAGACGACGAAATCGCAGCTGAAGAATTGTTGGTTGCTGCAGAATCAGTGA
BLAST of CmoCh04G029920.1 vs. TrEMBL
Match: A0A0A0KDH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014570 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72 Identity = 149/230 (64.78%), Postives = 173/230 (75.22%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. TrEMBL
Match: A0A067JQ58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03320 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42 Identity = 109/227 (48.02%), Postives = 145/227 (63.88%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. TrEMBL
Match: W9RLD7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011243 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 3.8e-41 Identity = 109/257 (42.41%), Postives = 151/257 (58.75%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. TrEMBL
Match: B9IQ58_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08630g PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40 Identity = 97/188 (51.60%), Postives = 129/188 (68.62%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. TrEMBL
Match: B9S4G4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690120 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40 Identity = 103/235 (43.83%), Postives = 137/235 (58.30%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. TAIR10
Match: AT3G56360.1 (AT3G56360.1 unknown protein) HSP 1 Score: 161.4 bits (407), Expect = 6.4e-40 Identity = 95/217 (43.78%), Postives = 129/217 (59.45%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. TAIR10
Match: AT5G05250.1 (AT5G05250.1 unknown protein) HSP 1 Score: 155.2 bits (391), Expect = 4.6e-38 Identity = 85/172 (49.42%), Postives = 113/172 (65.70%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. NCBI nr
Match: gi|659113834|ref|XP_008456777.1| (PREDICTED: uncharacterized protein LOC103496620 [Cucumis melo]) HSP 1 Score: 284.3 bits (726), Expect = 1.9e-73 Identity = 157/238 (65.97%), Postives = 177/238 (74.37%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. NCBI nr
Match: gi|778709689|ref|XP_011656439.1| (PREDICTED: uncharacterized protein LOC105435745 [Cucumis sativus]) HSP 1 Score: 279.6 bits (714), Expect = 4.6e-72 Identity = 149/230 (64.78%), Postives = 173/230 (75.22%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. NCBI nr
Match: gi|658048521|ref|XP_008359947.1| (PREDICTED: uncharacterized protein LOC103423635 [Malus domestica]) HSP 1 Score: 182.6 bits (462), Expect = 7.6e-43 Identity = 112/237 (47.26%), Postives = 145/237 (61.18%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. NCBI nr
Match: gi|802778425|ref|XP_012091143.1| (PREDICTED: uncharacterized protein LOC105649179 [Jatropha curcas]) HSP 1 Score: 181.4 bits (459), Expect = 1.7e-42 Identity = 109/227 (48.02%), Postives = 145/227 (63.88%), Query Frame = 1
BLAST of CmoCh04G029920.1 vs. NCBI nr
Match: gi|694445245|ref|XP_009349079.1| (PREDICTED: uncharacterized protein LOC103940649 [Pyrus x bretschneideri]) HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41 Identity = 112/240 (46.67%), Postives = 146/240 (60.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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