CmoCh04G027630 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G027630
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CASP-like protein
Location	Cmo_Chr04 : 19978028 .. 19978722 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATCCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTGAAAATGAAACAACATTTAAGTTTAAAGATGTTTATTCTTATCGGTAAGTGTGTTTTTAAATATATTTTCTCTTTTAGAATTCTCAGCTATTTTTTATTCAATCTGGTTCGGTTTATGTATAGATATTTGATATCAACTACGGTTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTACTCTTCGATATGTTCAGCGACAAAGTAAGTATACTAATATTTGTTTAAGCTTTCGAGATTTAAGGATGTTTAATGTCATGTTATGTTATGTAGCTGTTGTCGTATCTTCTACTGTCGGGAGCCTCGGCGGGGTTAGGTGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATTGTGTTGGTCTTCCATATTTGCTTTGTATTGAT

mRNA sequence

AGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATCCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTGAAAATGAAACAACATTTAAGTTTAAAGATGTTTATTCTTATCGATATTTGATATCAACTACGGTTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTACTCTTCGATATGTTCAGCGACAAACTGTTGTCGTATCTTCTACTGTCGGGAGCCTCGGCGGGGTTAGGTGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATTGTGTTGGTCTTCCATATTTGCTTTGTATTGAT

Coding sequence (CDS)

ATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTGATCCTAAGAATTCTGACCTTCATTTTGATCTTCATTTCTCTCATAATCAACGCCACCAATTCCAAAACTTTCAACAAAGGCGCTGAAAATGAAACAACATTTAAGTTTAAAGATGTTTATTCTTATCGATATTTGATATCAACTACGGTTATTGGAGCTGTTTTGAGTCTACTTCAAATCGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTACTCTTCGATATGTTCAGCGACAAACTGTTGTCGTATCTTCTACTGTCGGGAGCCTCGGCGGGGTTAGGTGCTGGCATCGATTTGAGAGTCGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTCGACAAGGGAAATGCTTCGGCGGCTGTTCTTCTCCTTGCGTTTATTTGCGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGA

Homology

[Close]

BLAST of CmoCh04G027630 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-25
Identity = 75/165 (45.45%), Postives = 107/165 (64.85%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63
           S GSR   L+LR+LTF+ + I+LI+ A   +T +   E     KF D+Y+YRY+IST +I
Sbjct: 14  STGSRTVLLLLRVLTFVFLLIALILIAIVKQTDD---ETGVEIKFNDIYAYRYMISTIII 73

Query: 64  GAVLSLLQIALNIYNVVTKSHRTL------LFDMFSDKLLSYLLLSGASAGLGAGIDLRV 123
           G   +LLQ+AL+I+ VV+  +R L      LFD F DK++SYLL+SG++AG G  ++L  
Sbjct: 74  GFAYNLLQMALSIFTVVS-GNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGR 133

Query: 124 GLKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
           G+        NSF DK NASA++LL+AF+  AV S  +S AL +K
Sbjct: 134 GVPS------NSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmoCh04G027630 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-23
Identity = 70/161 (43.48%), Postives = 101/161 (62.73%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63
           S  SR+A+LILRILTFI +  SL+I  TN+ T       E    FKDVY+YRY+++T VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLV-EVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAVLSLLQIALNIYNVVTKSHR-----TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVG 123
           G   ++LQIA  +Y V T +        L FD F DK++SY+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 LKELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLAL 160
                    ++F +KG ASA++LL+ F+C AV+S+ SS AL
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CmoCh04G027630 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 1


Query: 7   SRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAV 66
           SR+ +L LR+LTF  + +SL+I  TN+ T   G + E   + KD YSYRY+++    G  
Sbjct: 19  SRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAIAFGLT 78

Query: 67  LSLLQIALNIYNVV------TKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 126
            ++LQIAL + ++       T     L+FD + DK++SY+L +GA+A  GA  +L+  L 
Sbjct: 79  YTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLA 138

Query: 127 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
            L G+    FF+KG ASA++LLL F+C A++S+ SS AL +K
Sbjct: 139 GLGGD---KFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CmoCh04G027630 vs. Swiss-Prot
Match: CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.8e-20
Identity = 63/161 (39.13%), Postives = 101/161 (62.73%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVL 67
           +++ L+LR+LT + + I+LII +TNS T      +   F FKDVY+YRY++S  VIG + 
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLLY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIALVAL 133

Query: 128 ---NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ FF +G ASA++LL +FIC AV+S+ SSLA+ ++
Sbjct: 134 DSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of CmoCh04G027630 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.8e-20
Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVL 67
           ++  L+LR+LT + + I+LII +TNS T      +   F FKDVY+YRY++S  VIG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmoCh04G027630 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.2e-45
Identity = 109/161 (67.70%), Postives = 130/161 (80.75%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63
           SKG RIAS+ILRILTFI IFISL+I ATN+KT  K   NE   KF DV SYRY+++ TVI
Sbjct: 3   SKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62

Query: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123
           G  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K LV
Sbjct: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122

Query: 124 -GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
            G+  +SFFDKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 123 DGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmoCh04G027630 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.1e-44
Identity = 110/160 (68.75%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKT-FNKGAENETTFKFKDVYSYRYLISTTV 63
           SKG RIASLILR LTFIL FISL+I ATNSKT    G   E   KF +V SYRYL++T V
Sbjct: 3   SKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAV 62

Query: 64  IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 123
           IG  LSLLQI  NIY+++T    T LF MFSD+LL+YLLLSGASAGLGAGIDLRV +KEL
Sbjct: 63  IGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKEL 122

Query: 124 V-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIR 162
           + G   NSFFDK NA +A+LLLAF+CAA+VS+LSSLALIR
Sbjct: 123 LEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CmoCh04G027630 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 1


Query: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60
           ME S GSRI SLILRILTF+ +FIS  I  T S+T            F D + +RY+++T
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRP-----YKLHFNDYHGFRYMLAT 60

Query: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            +IG V +LLQIA +++N+V     T+LFD F DK LSYLL +GA+AG G G+DL+   K
Sbjct: 61  IIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---K 120

Query: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
               +L   FFDK  A++ +LL AF C+A VSILSS AL ++
Sbjct: 121 VDPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmoCh04G027630 vs. TrEMBL
Match: W9SGV0_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-24
Identity = 73/158 (46.20%), Postives = 107/158 (67.72%), Query Frame = 1


Query: 7   SRIASLILRILTFILIFISLIINATNSKTFNKGAE--NETTFKFKDVYSYRYLISTTVIG 66
           S I +L+LR+  F+L+ ISLI+  TN+ T  KG +   E  F+F+DV +YRY++S+ VIG
Sbjct: 7   SCIVNLVLRVFVFVLLLISLILICTNTTTA-KGTDVFAEQDFRFQDVIAYRYMLSSIVIG 66

Query: 67  AVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG 126
               LLQ+A  IYNV+ KS   LLFD + DK++SY+L +GA++G G   D+++   +L  
Sbjct: 67  TAFVLLQLAFTIYNVIAKSEGNLLFDFYGDKIMSYVLATGAASGFGVTNDMQMLFNKLNI 126

Query: 127 NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
            L + F+ K  ASA++LLLA +C AV+S+ SS ALI K
Sbjct: 127 FLGDDFYAKSYASASLLLLATVCTAVLSVFSSYALIPK 163

[Close]

BLAST of CmoCh04G027630 vs. TrEMBL
Match: M5X682_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 71/161 (44.10%), Postives = 108/161 (67.08%), Query Frame = 1


Query: 2   EGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTT 61
           + +  SRIASLILRILTFIL+ ISLI+ ATN+      +++++  +F D Y+YRY+++T 
Sbjct: 4   QATASSRIASLILRILTFILLLISLIVLATNTIG---SSDDDSKVRFTDFYAYRYMLATI 63

Query: 62  VIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 121
           VIG   SLLQ+ L I+N+V         D F DK +SY+L +GA+AG G  +DL+  +  
Sbjct: 64  VIGNAYSLLQLVLTIFNIVRGGDGMPFLDFFGDKFISYVLATGAAAGFGLTVDLKRLMDA 123

Query: 122 LVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              ++LN F DK  ASA++LLLAF+  A++S++S+  L ++
Sbjct: 124 SEVDMLN-FDDKAFASASLLLLAFVTTAILSVISAYTLPKR 160

[Close]

BLAST of CmoCh04G027630 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-21
Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVL 67
           ++  L+LR+LT + + I+LII +TNS T      +   F FKDVY+YRY++S  VIG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmoCh04G027630 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-20
Identity = 64/162 (39.51%), Postives = 101/162 (62.35%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVIGAVL 67
           R   L+LR+LT   + I++++ +TN+ T    + +     F DVY+YRY++S  VIG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTS-IKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT-KSHR-TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+ L I    T K+H  T  FD + DK++SYLL +G++AG G   DL+     L+  
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 ---NLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
              + ++ FF KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmoCh04G027630 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44
Identity = 109/161 (67.70%), Postives = 130/161 (80.75%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63
           SKG RIAS+ILRILTFI IFISL+I ATN+KT  K   NE   KF DV SYRY+++ TVI
Sbjct: 3   SKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62

Query: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123
           G  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K LV
Sbjct: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122

Query: 124 -GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
            G+  +SFFDKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 123 DGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmoCh04G027630 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-44
Identity = 109/161 (67.70%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63
           SKG RIASLILRILTFI IFISL+I ATNSKT  KG  +E   KF +V SYRYL++T VI
Sbjct: 3   SKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTVSEIKVKFDNVTSYRYLLATAVI 62

Query: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123
           G  LSLLQI  NIY++VT    T LF + SD+LL+YLLLSGASAG GAGIDL+V +KEL+
Sbjct: 63  GGALSLLQIIFNIYHLVTNREGTPLFYIISDQLLAYLLLSGASAGFGAGIDLKVNIKELL 122

Query: 124 -GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
             N  +SFF++GNA +A+LLLAFICAA+VS+LSSLALIR P
Sbjct: 123 ESNYYDSFFNEGNAGSAILLLAFICAAIVSLLSSLALIRNP 163

[Close]

BLAST of CmoCh04G027630 vs. NCBI nr
Match: gi|700196121|gb|KGN51298.1| (hypothetical protein Csa_5G515030 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 8.7e-44
Identity = 110/160 (68.75%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLIINATNSKT-FNKGAENETTFKFKDVYSYRYLISTTV 63
           SKG RIASLILR LTFIL FISL+I ATNSKT    G   E   KF +V SYRYL++T V
Sbjct: 3   SKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAV 62

Query: 64  IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 123
           IG  LSLLQI  NIY+++T    T LF MFSD+LL+YLLLSGASAGLGAGIDLRV +KEL
Sbjct: 63  IGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKEL 122

Query: 124 V-GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIR 162
           + G   NSFFDK NA +A+LLLAF+CAA+VS+LSSLALIR
Sbjct: 123 LEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CmoCh04G027630 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 5.3e-33
Identity = 80/163 (49.08%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60
           ME    ++IAS +LR+LTF+ + +S+I+  TNSKT      +     F +V SYRY ++T
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVH-----FHNVNSYRYAMAT 60

Query: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            +IG   +LLQIAL +Y +VTK+  ++LFD + DK+LSY LL+GA+A LG+ +DL+  + 
Sbjct: 61  IIIGGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANM- 120

Query: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
               ++LNSFFD+GNA+AA+LLLAF+C+A++S+LSSLAL  KP
Sbjct: 121 ----DMLNSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of CmoCh04G027630 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 1


Query: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60
           ME S GSR+ SLILRILTF+ +FIS  I  T S+T            F   + +RY+++T
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVRP-----YKLHFNSYHGFRYMLAT 60

Query: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            +IG V +LLQIA +++N+V     T+LFD F DK LSYLL +GA+AG G G+DL+   K
Sbjct: 61  IIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---K 120

Query: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
           +   +L  +FFDK  A++A+LL AF C+A VSILSS AL ++
Sbjct: 121 KDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

The following BLAST results are available for this feature:

BLAST of CmoCh04G027630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLC_SOYBN	4.1e-25	45.45	CASP-like protein 4D1 OS=Glycine max PE=2 SV=1	[more]
CSPLE_RICCO	2.9e-23	43.48	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLL_POPTR	3.2e-22	40.74	CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2	[more]
CSPLL_ARALL	8.8e-20	39.13	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 P...	[more]
CSPLB_ARATH	8.8e-20	40.37	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]

BLAST of CmoCh04G027630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS88_CUCSA	7.2e-45	67.70	CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KNU7_CUCSA	6.1e-44	68.75	CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1	[more]
A0A0A0KU83_CUCSA	2.7e-28	48.77	CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1	[more]
W9SGV0_9ROSA	1.8e-24	46.20	CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1	[more]
M5X682_PRUPE	2.0e-23	44.10	CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1	[more]

BLAST of CmoCh04G027630 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39518.1	4.9e-21	40.37	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	3.2e-20	39.51	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmoCh04G027630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450002\|ref\|XP_004142753.1\|	1.0e-44	67.70	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117983\|ref\|XP_008458889.1\|	3.9e-44	67.70	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|700196121\|gb\|KGN51298.1\|	8.7e-44	68.75	hypothetical protein Csa_5G515030 [Cucumis sativus]	[more]
gi\|659117979\|ref\|XP_008458887.1\|	5.3e-33	49.08	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|659117986\|ref\|XP_008458890.1\|	1.8e-28	48.15	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027630.1	CmoCh04G027630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 6..147 score: 4.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 7..162 score: 1.6
None	No IPR available	PANTHER	PTHR11615:SF148	SUBFAMILY NOT NAMED	coord: 7..162 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G027630	Cp4.1LG13g09490	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G027630	CsGy5G017250	Cucumber (Gy14) v2	cgybcmoB649

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G027630	CmoCh15G004070	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G027630	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G027630	Melon (DHL92) v3.6.1	cmomedB730
CmoCh04G027630	Melon (DHL92) v3.6.1	cmomedB796
CmoCh04G027630	Silver-seed gourd	carcmoB0370
CmoCh04G027630	Silver-seed gourd	carcmoB0940
CmoCh04G027630	Cucumber (Chinese Long) v3	cmocucB0869
CmoCh04G027630	Cucumber (Chinese Long) v3	cmocucB0832
CmoCh04G027630	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G027630	Watermelon (97103) v2	cmowmbB728
CmoCh04G027630	Watermelon (97103) v2	cmowmbB772
CmoCh04G027630	Wax gourd	cmowgoB0874
CmoCh04G027630	Cucurbita moschata (Rifu)	cmocmoB476
CmoCh04G027630	Cucumber (Gy14) v1	cgycmoB0544
CmoCh04G027630	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G027630	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G027630	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G027630	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G027630	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G027630	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G027630	Watermelon (97103) v1	cmowmB646
CmoCh04G027630	Watermelon (97103) v1	cmowmB717
CmoCh04G027630	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G027630	Bottle gourd (USVL1VR-Ls)	cmolsiB626
CmoCh04G027630	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G027630	Bottle gourd (USVL1VR-Ls)	cmolsiB667
CmoCh04G027630	Cucumber (Gy14) v2	cgybcmoB520
CmoCh04G027630	Cucumber (Gy14) v2	cgybcmoB626
CmoCh04G027630	Cucumber (Gy14) v2	cgybcmoB648