CmoCh15G004070 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACTTCGAGTGCTTCAAGAGTGACTTGTCTTGTATTAAGAATACTAACTTTTGTGTTTCTTTTCATCTCCTTCTTCATTCTCATCACCACTTCCCAAACTGTTCAATCAATTAAGTTTCACTTCAATGACTTTCATACATATAGGTAACTTCACAAATTATATTTCATTTTACAACCATTAACATATACGTAACTGTGTTCCAAATGATTCTTATAGGTACGTGCTTGCTACTATCATCGTCGAGATCGTATTCAATCTCTTGCAAATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGAACCATACTATTTGATTTCTTTGGCGACAAGGTACGTTATACACAAACATTCGGTGTCGTGTCGTGTCGTGTGCGAGTCAAATGATTCTTTAGCGTGCAACGGTTTTGGTGCAGTTTTTGTCGTATCTTCTAGCAACGAGCACTGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAAGACCCAGAGGATTTGTTTGGAACGTTCTTTGATAAGGCATATGCAGCCTCAGCTCTTCTTTTGTTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGCTCTCAAAGAGACCTTAATTAATTCATCTTTTCGATTTTTATAGAATTTTAGTATTAATGTAACATGTTCGATGAAAAAAAGTTAAATTTTAAGTTAACCTATTCGAAAAAAATAATTGTTATATCATTAAATTATTATTATTTTCTCTAAATTTTGGAAATAAATATACTTGCGTATGCGCCATAATAATACGTCATTATTTATTATTTTATTTCTATTTTTTAACGTTGACTTTGATAGAAACTAAGAAGAAATAAGTCCAGGTTTGATGAGATGGGTTCTAGGGACAACCCTATGACAGCTGATATGGACAAGAATGCCAGGTCATTTCCTGCGTATAATTATCCACCTCAGAAATAGGAAATGAAAATGAAAAATCTACAAATTCAATTCACATTTTAAATAATTAATATGAAAAAATTTAAAGGTTGTGAAAGGGATTATGGGAAAGCTAAGAGTTGAAATATTATTCCAAAAAATGGAGAATTGGTAGCCCACCACTTGTTTCCTCAATTTATTTATGGCCACAACTTTACCAAATTAAATAATTAAATTCATTTTATTCCCAACTTGCCCGCCTACTTTAATAATAATAGGATTATTATTATTATTTTTGGTCAAACATATAAATATAATAGCGAGGAAATAAACATATTTAAAATAAAAAAATAGCGCGTGGGAGGAGTATAACCATCAACCTCACAACTTCTTTATTTGATATCTCGAGGAATCGACGAATTTCCACGGTGGTTTGACATTATTTACTTTGAACATGATCTTTCGTAATTGATTTTTTTTTTTTCAGAAATTTTCTTTTATTAATTAGTACCCATGATTTTCCCTAAACAAGCTAACATAAGACTCCACGATAAAAGATTCAAAATGGAATTGAAAACAAAACTTTATTTTTTAAAAAATAAGTATTTAAAATTTAATCAAAACCAATTAAAGATGTTCGCATAACTCAATAACTCGACCAACTTAGATTATATAATCCAAACCATAAAAGTTGGGTTAGGTTAAATTCTTTTTTAGTTTGGGTTGGGTTCAATCTTTGAAGAACTAAAAACTTGGTTCGATTTGTGCGTTGACTGTTTTTTTTTAGCCAACCAACCCTAAAATAGGGTTACAATCTAACCCTACCCTACTTTTAAAAATATTAAAAATATTTAACGTTTGTAATGGATATTAGTGATGTATTGTGGCGTGTAAATGTTTGATATTAAAATTTTATGAGATTTTAGTTATTAATGTAACTTGTACGGTGAATAAGTAAGATTTAAAAAAATAATAATCTGACAACCCAATTCAACCCGGAAATAGAAAGTTGGCTTGGTTTAACTTGTGAACTCTATTCAAGTTACTCGAGTCACCAACTCGAAATTAACCCAGTAACTCAACCGAACCCAATCCGTGTACAAAATTGACCGAGCAAAAAAAAAACTTCGATTTTCAAATTTGCTAGAAGAGAGGCCAATCACCAACTCGTCTCTTATGATTAATTTCCAAGAACTTATGGGATTTATTTATGACTTGGTAAACGTCATGTTTGAGGGCTATAAAACCCTCTTCCCATGCAATTTCATGCCATTTTTGTGGAGAGAATTACAAAGAGTTTTTGGTTTTGTTAATATCATAAGAGAAACATGGAAAGTTCAAGTGGTGCAAGGGTGACTTGTCTTATATTGAGAATCCTAACCTTCGTGTTTCTATTCATCTCCTTCTTCGTTCTCGTCACCACGTCCCAAACCGTTGAATCGGTAAAGTTTCATTTCAACAACTTCCATACATATAGGTACGTGCTTGCTACGATCATCATCGGGGTCGTATTCAACCTCTTGCAAATCGCGTTCTCCCTCTTAAATATCGTTAAAGGTGCAACCGGTACCATACTATTTGATTTCTTTGGCGACAAGGTACGTTATACACACACATCTAGTGTCATGTTTGATTCGATTCGAATATGTGGCCCTAAACGCGTCGGTTTTGGTGCAGTTTTTGTCATACCTTCTAGCCACAGGCACAGCAGCTGGGTTTGGACTATCGGTGGATTTGCAAACATTAGACCCAGATGACTACTTTGGAACATTCTTTGACAAGGCATATGCGGCCTCAGCTCTTCTTTTGTTCGCGTTCTTTTGTTCGGCGGCGGTCTCTATTATCTCTTCTTTTGCACTCTCCAAGCGACCTTAATTAATTAATCTCTGGTTATTTAATTGTTTCCAAGTTCTTTTTCTTTTGTCCTAAGATCATGTTGTTCTTATTGGGTTTTGTTTGATGATTTGTTACCATTCTTTTTCTCCGAAATTTTATGGGATTGTTTG ATGGAAACTTCGAGTGCTTCAAGAGTGACTTGTCTTGTATTAAGAATACTAACTTTTGTGTTTCTTTTCATCTCCTTCTTCATTCTCATCACCACTTCCCAAACTGTTCAATCAATTAAGTTTCACTTCAATGACTTTCATACATATAGGTACGTGCTTGCTACTATCATCGTCGAGATCGTATTCAATCTCTTGCAAATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGAACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCGTATCTTCTAGCAACGAGCACTGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAAGACCCAGAGGATTTGTTTGGAACAATTTTAGTATTAATGTTTGATGAGATGGGTTCTAGGGACAACCCTATGACAGCTGATATGGACAAGAATGCCAGGTACGTGCTTGCTACGATCATCATCGGGGTCGTATTCAACCTCTTGCAAATCGCGTTCTCCCTCTTAAATATCGTTAAAGGTGCAACCGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCCACAGGCACAGCAGCTGGGTTTGGACTATCGGTGGATTTGCAAACATTAGACCCAGATGACTACTTTGGAACATTCTTTGACAAGGCATATGCGGCCTCAGCTCTTCTTTTGTTCGCGTTCTTTTGTTCGGCGGCGGTCTCTATTATCTCTTCTTTTGCACTCTCCAAGCGACCTTAATTAATTAATCTCTGGTTATTTAATTGTTTCCAAGTTCTTTTTCTTTTGTCCTAAGATCATGTTGTTCTTATTGGGTTTTGTTTGATGATTTGTTACCATTCTTTTTCTCCGAAATTTTATGGGATTGTTTG ATGGAAACTTCGAGTGCTTCAAGAGTGACTTGTCTTGTATTAAGAATACTAACTTTTGTGTTTCTTTTCATCTCCTTCTTCATTCTCATCACCACTTCCCAAACTGTTCAATCAATTAAGTTTCACTTCAATGACTTTCATACATATAGGTACGTGCTTGCTACTATCATCGTCGAGATCGTATTCAATCTCTTGCAAATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGAACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCGTATCTTCTAGCAACGAGCACTGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAAGACCCAGAGGATTTGTTTGGAACAATTTTAGTATTAATGTTTGATGAGATGGGTTCTAGGGACAACCCTATGACAGCTGATATGGACAAGAATGCCAGGTACGTGCTTGCTACGATCATCATCGGGGTCGTATTCAACCTCTTGCAAATCGCGTTCTCCCTCTTAAATATCGTTAAAGGTGCAACCGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCCACAGGCACAGCAGCTGGGTTTGGACTATCGGTGGATTTGCAAACATTAGACCCAGATGACTACTTTGGAACATTCTTTGACAAGGCATATGCGGCCTCAGCTCTTCTTTTGTTCGCGTTCTTTTGTTCGGCGGCGGTCTCTATTATCTCTTCTTTTGCACTCTCCAAGCGACCTTAA
BLAST of CmoCh15G004070 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.9e-19 Identity = 54/117 (46.15%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of CmoCh15G004070 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18 Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of CmoCh15G004070 vs. Swiss-Prot
Match: PIMP1_CAPAN (CASP-like protein PIMP1 OS=Capsicum annuum GN=PIMP1 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.6e-18 Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 1
BLAST of CmoCh15G004070 vs. Swiss-Prot
Match: CSPLC_ARATH (CASP-like protein 4D1 OS=Arabidopsis thaliana GN=At2g39530 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 1
BLAST of CmoCh15G004070 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41 Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TrEMBL
Match: M5XNH4_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa020447mg PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20 Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TrEMBL
Match: M5X682_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.2e-20 Identity = 55/120 (45.83%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TrEMBL
Match: V7B2Y5_PHAVU (CASP-like protein OS=Phaseolus vulgaris GN=PHAVU_008G012300g PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.1e-19 Identity = 59/117 (50.43%), Postives = 86/117 (73.50%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TrEMBL
Match: A0A0D2UY23_GOSRA (CASP-like protein OS=Gossypium raimondii GN=B456_011G257400 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.0e-19 Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 1
BLAST of CmoCh15G004070 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 1
BLAST of CmoCh15G004070 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]) HSP 1 Score: 178.3 bits (451), Expect = 1.6e-41 Identity = 96/122 (78.69%), Postives = 107/122 (87.70%), Query Frame = 1
BLAST of CmoCh15G004070 vs. NCBI nr
Match: gi|449450161|ref|XP_004142832.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 4.8e-41 Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 1
BLAST of CmoCh15G004070 vs. NCBI nr
Match: gi|645255694|ref|XP_008233613.1| (PREDICTED: CASP-like protein RCOM_1206790 [Prunus mume]) HSP 1 Score: 107.8 bits (268), Expect = 2.7e-20 Identity = 55/120 (45.83%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of CmoCh15G004070 vs. NCBI nr
Match: gi|596029153|ref|XP_007219401.1| (hypothetical protein PRUPE_ppa020447mg [Prunus persica]) HSP 1 Score: 107.8 bits (268), Expect = 2.7e-20 Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
BLAST of CmoCh15G004070 vs. NCBI nr
Match: gi|596037503|ref|XP_007219782.1| (hypothetical protein PRUPE_ppa024507mg [Prunus persica]) HSP 1 Score: 106.7 bits (265), Expect = 6.1e-20 Identity = 55/120 (45.83%), Postives = 83/120 (69.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |