CmoCh04G027510 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGGTGAATGGCTTCCACAATTATTATTATTTTATAATTTATATATATATATATATCTTAATTATTTTTTTAATATTAGCAGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGTGAGCTTTTCCTCTTCTTTTCCCTTTTCGATTCATTTTGTCTGGCTTAGTTTTGTTGATTATTGTTCTTTTTTCTTTTTTTTTCCATTAGTTAATTTGTTTGTTTATTTTTCTCTTCTATGTTTTTCTATTCGATCCTTGGAGTTTTTCTATTCGATCCTTGGAGTTCTTGGCTGTTTTGAAACGGAATCCTTGTAAATCGCTGCATCGATTGATTGTTGTTCATTTTCGTCCGCTTGTTTAGTGTTTCAATGGCCTTGGATTGTTGATTATATTGAATACCATGCATTGTTAGCGAGTGGCTAAAAGCATTGGCCACCGTTGATGTAAATCGACTTATTACGTTCTCGTACATTGATCCCTGTTTTCACTGGGACCTTGTGTTGTGACTTCACTTTAAATCCTTTAGTTTATTATTATTTTTAATATTTTCCCCTGCCCGTTAATGATGATAATTGTGAGATGTTTGCTTCATCTCAGTGGTTTAAACATTGGCATTTTTGTTGATGGATATGATTCTTATATTGAGATATTTTGCATTGTGTTACCTGAAAGTGTATGATGATTTATCACAAGTTTATATAATTTGGAAACCTTCTATTGACGAAGTTGGAAAAGAAGACTGAAGGGTATTGGATTGGAAAGGAAAACATCTATTTAACTATTTCAATAGAGGTTTATTATCATCGGTCCATCTCATTTTGGTATGGTCATTGTCAAAACTCCTTCATGGATCCAAGTTATTTCACTTTGGGATAGTCCATGAGTCGCCCTCTTCTCCCTCAATGTTGTTCATCCTTTGTGATTTTCCTTTATTTCTTAGTTTGCTTCTCCCTTATCACCATCACCATTAGCGCGTTTGTTAGGAAATGGGGATAGGACGCTTGTTGGCATAGACTATAGAGCTAAGCATCATATTTGAAGGTGTGATTTGTTTCAGAATTAAAAAGTTGTGGCTCTAGAATTTCAGGGAGGAGCTGGTTAAAATTGTTCTCCTAAACACTAGAGACTAGGGTCACTGTTGGATACAATGACAATAAGAAACGAGTAATGAGAAAAGGTCAGAGGTTCAAATCCCCCCTGCATATTTTCGAACTAAAAAAAAGGATGATTTTTTTCTCTCCCTACTTCTATCATACTGTAATAAAGTGTTAGGTTTCTTATAAAAAAAAAAAGAAAAAAAAAAGGGAAACAAAAAGGATTTAGGGGTTTTACCAAAGGGATGTTCATACAGTAAGAGGACTTCTATAAAAAAGAAACTAGGATCAGATCCCTCTTGCAGGTGCATTGTTATATGAACTTGATTTCTGGGGGCTCTGTTTGTAAATATGATTTTCATGTTAGTGTTTAGTAGCATAACATGGATATTAACTACAATGATGAAAACTCCTTGGTAGGGGAAACTCGAATGGAAGTTGATTGTCATCTAACCAAAGAACTAGCTTCAAAGTTTGACCCCCAAGCCTACGTGTTGTTAGGGAATTCCCCAAACACTTCGCTGATGCTAATAACTTGAATGGGTCACTTTTGAGAGATTGATGTTTAGTGTTATGCCCTATTCACCACAGAGCCACTTACATTCCATAAAGAGTAGGGGAATTGTTTGAAGTCTAGGCCTCCAGAGCCACTTACATTCCATCTCAAAGTTCTCATGGGACATTTGTACACCTTATGAGTCAACTTTGGCCCACATTGTTTTTCCTTGGAAAAAAAAAAAAAGGATATGCCTATCATCAAATAAAAAGCTAATTCAATTATGAAAAGGATGTTTTATGTACAGATAAAACTTCATCTTGTTAACTTATGCGAAGATTGAATTAGCTTTTTATAATTGAATTAGCTTTTTATTATTGAATTAGCTTTTTATTTGATGATAGGCATATCTTTTCTTTTTTTTTTTTTCCAAGGAAAAACAATGTGGGCCAAAGTTGACTCATAAGGTGTACAAATATAGATTAGACTTCTTCTGATAATTTCACCAACGAAAAAGATTATTTCTAGGTGGCTAGTTTTGATGCATATTTCTCTATGGAAATCTGAGGCAGATTCTTCGTTTCAAGAACTGAAAGCTTGGAAAACATTGAGTGAGTTTGGGTCTTTAAATCCGTTGTCATAGTATCCTGATGGATGTTCAATAGGGTTTCTGAAGAAAATAGGACTTCATAATTTACATTTGTAAATCAATTTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTAAATGTACTACAAACGATTTCCTCACTCATTTTATGAATCTGCATTCTAACTCATCATCTATCAAATGCGATGTTTGAAGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGCTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTTTACCGTCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTTTGTGAGGTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGCAATGATTTTCGAGTTTCATGTGTTCCATTTTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCTTTGTGTTAGGCATACGTTTTCTGTGGAACTCTTCCAGTTCATGAATTTAAGGGTCGGATGCTTATTTTAATAGGTTTCTCGTTTAATGTCTAATAAGTTATTGAACTTTAACGTCACGTTTTATGCCCG ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGCTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTTTACCGTCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTTTGTGAGGTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGCAATGATTTTCGAGTTTCATGTGTTCCATTTTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCTTTGTGTTAGGCATACGTTTTCTGTGGAACTCTTCCAGTTCATGAATTTAAGGGTCGGATGCTTATTTTAATAGGTTTCTCGTTTAATGTCTAATAAGTTATTGAACTTTAACGTCACGTTTTATGCCCG ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAG
BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 9.4e-67 Identity = 123/139 (88.49%), Postives = 134/139 (96.40%), Query Frame = 1
BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 6.1e-66 Identity = 123/138 (89.13%), Postives = 133/138 (96.38%), Query Frame = 1
BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=1 SV=2) HSP 1 Score: 245.4 bits (625), Expect = 5.7e-64 Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 1
BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.3e-63 Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 1
BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62 Identity = 115/138 (83.33%), Postives = 132/138 (95.65%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0A0KNQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G512870 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.7e-70 Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0U4JRK1_ZIZJJ (Actin-depolymerizing factor 1 OS=Ziziphus jujuba GN=ACT1 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.5e-68 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0D2SKK5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G264800 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68 Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A061GW84_THECC (Actin depolymerizing factor 4 OS=Theobroma cacao GN=TCM_041889 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68 Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0B0N468_GOSAR (Actin-depolymerizing factor 1 OS=Gossypium arboreum GN=F383_06723 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68 Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TAIR10
Match: AT3G46010.2 (AT3G46010.2 actin depolymerizing factor 1) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-65 Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4) HSP 1 Score: 245.4 bits (625), Expect = 3.2e-65 Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TAIR10
Match: AT3G46000.1 (AT3G46000.1 actin depolymerizing factor 2) HSP 1 Score: 237.7 bits (605), Expect = 6.7e-63 Identity = 114/138 (82.61%), Postives = 129/138 (93.48%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TAIR10
Match: AT5G59880.1 (AT5G59880.1 actin depolymerizing factor 3) HSP 1 Score: 231.5 bits (589), Expect = 4.8e-61 Identity = 109/138 (78.99%), Postives = 127/138 (92.03%), Query Frame = 1
BLAST of CmoCh04G027510 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8) HSP 1 Score: 228.0 bits (580), Expect = 5.3e-60 Identity = 105/140 (75.00%), Postives = 127/140 (90.71%), Query Frame = 1
BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|659127012|ref|XP_008463478.1| (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo]) HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70 Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 1
BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|449449972|ref|XP_004142738.1| (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 272.7 bits (696), Expect = 5.3e-70 Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 1
BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|296086270|emb|CBI31711.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 269.2 bits (687), Expect = 5.9e-69 Identity = 136/161 (84.47%), Postives = 146/161 (90.68%), Query Frame = 1
BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|1009120557|ref|XP_015876986.1| (PREDICTED: actin-depolymerizing factor 1-like isoform X7 [Ziziphus jujuba]) HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68 Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 1
BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|702241997|ref|XP_010047513.1| (PREDICTED: actin-depolymerizing factor 2 [Eucalyptus grandis]) HSP 1 Score: 267.3 bits (682), Expect = 2.2e-68 Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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