CmoCh04G027510 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G027510
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionActin depolymerizing factor 4
LocationCmo_Chr04 : 19910171 .. 19913663 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGGTGAATGGCTTCCACAATTATTATTATTTTATAATTTATATATATATATATATCTTAATTATTTTTTTAATATTAGCAGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGTGAGCTTTTCCTCTTCTTTTCCCTTTTCGATTCATTTTGTCTGGCTTAGTTTTGTTGATTATTGTTCTTTTTTCTTTTTTTTTCCATTAGTTAATTTGTTTGTTTATTTTTCTCTTCTATGTTTTTCTATTCGATCCTTGGAGTTTTTCTATTCGATCCTTGGAGTTCTTGGCTGTTTTGAAACGGAATCCTTGTAAATCGCTGCATCGATTGATTGTTGTTCATTTTCGTCCGCTTGTTTAGTGTTTCAATGGCCTTGGATTGTTGATTATATTGAATACCATGCATTGTTAGCGAGTGGCTAAAAGCATTGGCCACCGTTGATGTAAATCGACTTATTACGTTCTCGTACATTGATCCCTGTTTTCACTGGGACCTTGTGTTGTGACTTCACTTTAAATCCTTTAGTTTATTATTATTTTTAATATTTTCCCCTGCCCGTTAATGATGATAATTGTGAGATGTTTGCTTCATCTCAGTGGTTTAAACATTGGCATTTTTGTTGATGGATATGATTCTTATATTGAGATATTTTGCATTGTGTTACCTGAAAGTGTATGATGATTTATCACAAGTTTATATAATTTGGAAACCTTCTATTGACGAAGTTGGAAAAGAAGACTGAAGGGTATTGGATTGGAAAGGAAAACATCTATTTAACTATTTCAATAGAGGTTTATTATCATCGGTCCATCTCATTTTGGTATGGTCATTGTCAAAACTCCTTCATGGATCCAAGTTATTTCACTTTGGGATAGTCCATGAGTCGCCCTCTTCTCCCTCAATGTTGTTCATCCTTTGTGATTTTCCTTTATTTCTTAGTTTGCTTCTCCCTTATCACCATCACCATTAGCGCGTTTGTTAGGAAATGGGGATAGGACGCTTGTTGGCATAGACTATAGAGCTAAGCATCATATTTGAAGGTGTGATTTGTTTCAGAATTAAAAAGTTGTGGCTCTAGAATTTCAGGGAGGAGCTGGTTAAAATTGTTCTCCTAAACACTAGAGACTAGGGTCACTGTTGGATACAATGACAATAAGAAACGAGTAATGAGAAAAGGTCAGAGGTTCAAATCCCCCCTGCATATTTTCGAACTAAAAAAAAGGATGATTTTTTTCTCTCCCTACTTCTATCATACTGTAATAAAGTGTTAGGTTTCTTATAAAAAAAAAAAGAAAAAAAAAAGGGAAACAAAAAGGATTTAGGGGTTTTACCAAAGGGATGTTCATACAGTAAGAGGACTTCTATAAAAAAGAAACTAGGATCAGATCCCTCTTGCAGGTGCATTGTTATATGAACTTGATTTCTGGGGGCTCTGTTTGTAAATATGATTTTCATGTTAGTGTTTAGTAGCATAACATGGATATTAACTACAATGATGAAAACTCCTTGGTAGGGGAAACTCGAATGGAAGTTGATTGTCATCTAACCAAAGAACTAGCTTCAAAGTTTGACCCCCAAGCCTACGTGTTGTTAGGGAATTCCCCAAACACTTCGCTGATGCTAATAACTTGAATGGGTCACTTTTGAGAGATTGATGTTTAGTGTTATGCCCTATTCACCACAGAGCCACTTACATTCCATAAAGAGTAGGGGAATTGTTTGAAGTCTAGGCCTCCAGAGCCACTTACATTCCATCTCAAAGTTCTCATGGGACATTTGTACACCTTATGAGTCAACTTTGGCCCACATTGTTTTTCCTTGGAAAAAAAAAAAAAGGATATGCCTATCATCAAATAAAAAGCTAATTCAATTATGAAAAGGATGTTTTATGTACAGATAAAACTTCATCTTGTTAACTTATGCGAAGATTGAATTAGCTTTTTATAATTGAATTAGCTTTTTATTATTGAATTAGCTTTTTATTTGATGATAGGCATATCTTTTCTTTTTTTTTTTTTCCAAGGAAAAACAATGTGGGCCAAAGTTGACTCATAAGGTGTACAAATATAGATTAGACTTCTTCTGATAATTTCACCAACGAAAAAGATTATTTCTAGGTGGCTAGTTTTGATGCATATTTCTCTATGGAAATCTGAGGCAGATTCTTCGTTTCAAGAACTGAAAGCTTGGAAAACATTGAGTGAGTTTGGGTCTTTAAATCCGTTGTCATAGTATCCTGATGGATGTTCAATAGGGTTTCTGAAGAAAATAGGACTTCATAATTTACATTTGTAAATCAATTTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTAAATGTACTACAAACGATTTCCTCACTCATTTTATGAATCTGCATTCTAACTCATCATCTATCAAATGCGATGTTTGAAGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGCTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTTTACCGTCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTTTGTGAGGTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGCAATGATTTTCGAGTTTCATGTGTTCCATTTTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCTTTGTGTTAGGCATACGTTTTCTGTGGAACTCTTCCAGTTCATGAATTTAAGGGTCGGATGCTTATTTTAATAGGTTTCTCGTTTAATGTCTAATAAGTTATTGAACTTTAACGTCACGTTTTATGCCCG

mRNA sequence

ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTGAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGCTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTTTACCGTCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTTTGTGAGGTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGCAATGATTTTCGAGTTTCATGTGTTCCATTTTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCTTTGTGTTAGGCATACGTTTTCTGTGGAACTCTTCCAGTTCATGAATTTAAGGGTCGGATGCTTATTTTAATAGGTTTCTCGTTTAATGTCTAATAAGTTATTGAACTTTAACGTCACGTTTTATGCCCG

Coding sequence (CDS)

ATGTTCGGTTTCTTAGCCGTCTGGGTGATATTATCAATCGCCACCACCCTCCGGTCGAATCTCTTAGGCCTTGCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACCCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACCTTTCTCGCCCTTTCTTTCGCTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCTGATGAATGCCGATATGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAAAGCAGGATTATATTCATTGCCTGGTCTCCTGATACGTCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAG
BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.4e-67
Identity = 123/139 (88.49%), Postives = 134/139 (96.40%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+FL+LKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDF+T+EN QKSRI FIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDV RSR+G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-66
Identity = 123/138 (89.13%), Postives = 133/138 (96.38%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           P +ECRYAVYDFDFVT ENCQKSRI FIAW PDT+RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQA DPTEMGLDVI+SR+
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=1 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-64
Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSR 207
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-63
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

BLAST of CmoCh04G027510 vs. Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62
Identity = 115/138 (83.33%), Postives = 132/138 (95.65%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAV D+CKL+FL+LKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PA+ECRYA++D+DFVTEENCQKS+I FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTE+GLDVIR R+
Sbjct: 121 LQATDPTEVGLDVIRGRA 138

BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0A0KNQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G512870 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.7e-70
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0U4JRK1_ZIZJJ (Actin-depolymerizing factor 1 OS=Ziziphus jujuba GN=ACT1 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.5e-68
Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 1

Query: 71  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLP 130
           ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF+ASLP
Sbjct: 202 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFSASLP 261

Query: 131 ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 190
           A+ECRYAVYDFDFVTEENCQKSRIIFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 262 ANECRYAVYDFDFVTEENCQKSRIIFIAWSPDASRVRSKMIYASSKDRFKRELDGIQVEL 321

Query: 191 QATDPTEMGLDVIRSRS 208
           QATDPTEMGLDVIRSRS
Sbjct: 322 QATDPTEMGLDVIRSRS 338

BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0D2SKK5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G264800 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYDDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVT ENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDVIRSR+
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A061GW84_THECC (Actin depolymerizing factor 4 OS=Theobroma cacao GN=TCM_041889 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLGEP+QSYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPTQSYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVT ENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDVIRSR+
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

BLAST of CmoCh04G027510 vs. TrEMBL
Match: A0A0B0N468_GOSAR (Actin-depolymerizing factor 1 OS=Gossypium arboreum GN=F383_06723 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYDDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVT ENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDVIRSR+
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

BLAST of CmoCh04G027510 vs. TAIR10
Match: AT3G46010.2 (AT3G46010.2 actin depolymerizing factor 1)

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-65
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 1

Query: 64  FRFLGKMANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYE 123
           F  L + ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE
Sbjct: 6   FHLLSRSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYE 65

Query: 124 DFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKREL 183
           +FAA LPADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKREL
Sbjct: 66  EFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKREL 125

Query: 184 DGIQVELQATDPTEMGLDVIRSRS 208
           DGIQVELQATDPTEM LDV RSR+
Sbjct: 126 DGIQVELQATDPTEMDLDVFRSRA 149

BLAST of CmoCh04G027510 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 245.4 bits (625), Expect = 3.2e-65
Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSR 207
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

BLAST of CmoCh04G027510 vs. TAIR10
Match: AT3G46000.1 (AT3G46000.1 actin depolymerizing factor 2)

HSP 1 Score: 237.7 bits (605), Expect = 6.7e-63
Identity = 114/138 (82.61%), Postives = 129/138 (93.48%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+F++LKAKRT+R IV+KIE+  KQV+VEKLGEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDT++VR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

BLAST of CmoCh04G027510 vs. TAIR10
Match: AT5G59880.1 (AT5G59880.1 actin depolymerizing factor 3)

HSP 1 Score: 231.5 bits (589), Expect = 4.8e-61
Identity = 109/138 (78.99%), Postives = 127/138 (92.03%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+F++LK KRT+RFI++KIEE QKQV+VEK+GEP Q++ED AASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYA++DFDFV+ E   +SRI F+AWSPDT+RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEM LDV +SR+
Sbjct: 121 LQATDPTEMDLDVFKSRA 138

BLAST of CmoCh04G027510 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 228.0 bits (580), Expect = 5.3e-60
Identity = 105/140 (75.00%), Postives = 127/140 (90.71%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MAN+ASGM V+D+CK++FL+LKAKRTYRFIVFKI+EK +QV +EKLG P ++Y+DF +S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           P DECRYAVYDFDF TE+NCQKS+I FIAWSPDTSRVRSKM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSGL 210
           LQATDP+EM LD+I+ R  L
Sbjct: 121 LQATDPSEMSLDIIKGRLNL 140

BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|659127012|ref|XP_008463478.1| (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|449449972|ref|XP_004142738.1| (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 5.3e-70
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRSG 209
           LQATDPTEMGLDVIRSRSG
Sbjct: 121 LQATDPTEMGLDVIRSRSG 139

BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|296086270|emb|CBI31711.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 269.2 bits (687), Expect = 5.9e-69
Identity = 136/161 (84.47%), Postives = 146/161 (90.68%), Query Frame = 1

Query: 51  VEALNFLNLSRPFFRFLG----KMANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEK 110
           VE+L       PFF FL     +MANAASGMAVHDDCKL+FL+LKAKRTYR IVF+IEEK
Sbjct: 41  VESLPHFLFLAPFFHFLSLLLARMANAASGMAVHDDCKLKFLELKAKRTYRSIVFQIEEK 100

Query: 111 QKQVVVEKLGEPSQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRV 170
           QKQV+VEK+GEP+QSYEDFAASLPADECRYAVYDFDFVTEENCQKSRI FIAWSPDTSRV
Sbjct: 101 QKQVIVEKVGEPTQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIFFIAWSPDTSRV 160

Query: 171 RSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRS 208
           RSKMIYASSKDRFKRELDGIQVELQATDPTE+GLDVIRSR+
Sbjct: 161 RSKMIYASSKDRFKRELDGIQVELQATDPTEIGLDVIRSRA 201

BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|1009120557|ref|XP_015876986.1| (PREDICTED: actin-depolymerizing factor 1-like isoform X7 [Ziziphus jujuba])

HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF+ASL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFSASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PA+ECRYAVYDFDFVTEENCQKSRIIFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIIFIAWSPDASRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

BLAST of CmoCh04G027510 vs. NCBI nr
Match: gi|702241997|ref|XP_010047513.1| (PREDICTED: actin-depolymerizing factor 2 [Eucalyptus grandis])

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-68
Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 1

Query: 70  MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 129
           MANAASGMAVHDDCKLRFL+LKAKRTYRFIVFKIEEKQKQVVVEK+GEP+QSYEDF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFTASL 60

Query: 130 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 189
           PADECRYAVYDFDFVTEENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 190 LQATDPTEMGLDVIRSRS 208
           LQATDPTEMGLDVIRSR+
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ADF2_PETHY9.4e-6788.49Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1[more]
ADF1_PETHY6.1e-6689.13Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1[more]
ADF4_ARATH5.7e-6486.13Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=1 SV=2[more]
ADF1_ARATH1.3e-6385.51Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1[more]
ADF7_ORYSJ1.1e-6283.33Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KNQ1_CUCSA3.7e-7097.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G512870 PE=3 SV=1[more]
A0A0U4JRK1_ZIZJJ3.5e-6896.35Actin-depolymerizing factor 1 OS=Ziziphus jujuba GN=ACT1 PE=2 SV=1[more]
A0A0D2SKK5_GOSRA7.7e-6894.93Uncharacterized protein OS=Gossypium raimondii GN=B456_013G264800 PE=3 SV=1[more]
A0A061GW84_THECC7.7e-6894.93Actin depolymerizing factor 4 OS=Theobroma cacao GN=TCM_041889 PE=3 SV=1[more]
A0A0B0N468_GOSAR7.7e-6894.93Actin-depolymerizing factor 1 OS=Gossypium arboreum GN=F383_06723 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G46010.21.4e-6582.64 actin depolymerizing factor 1[more]
AT5G59890.13.2e-6586.13 actin depolymerizing factor 4[more]
AT3G46000.16.7e-6382.61 actin depolymerizing factor 2[more]
AT5G59880.14.8e-6178.99 actin depolymerizing factor 3[more]
AT4G00680.15.3e-6075.00 actin depolymerizing factor 8[more]
Match NameE-valueIdentityDescription
gi|659127012|ref|XP_008463478.1|1.8e-7097.84PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo][more]
gi|449449972|ref|XP_004142738.1|5.3e-7097.12PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis sativus][more]
gi|296086270|emb|CBI31711.3|5.9e-6984.47unnamed protein product [Vitis vinifera][more]
gi|1009120557|ref|XP_015876986.1|1.7e-6896.38PREDICTED: actin-depolymerizing factor 1-like isoform X7 [Ziziphus jujuba][more]
gi|702241997|ref|XP_010047513.1|2.2e-6895.65PREDICTED: actin-depolymerizing factor 2 [Eucalyptus grandis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR017904ADF/Cofilin
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
molecular_function GO:0046983 protein dimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G027510.1CmoCh04G027510.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 83..205
score: 2.0
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 81..208
score: 1.8
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 74..208
score: 38
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 71..206
score: 5.1E
NoneNo IPR availablePANTHERPTHR11913:SF22ACTIN-DEPOLYMERIZING FACTOR 1-RELATEDcoord: 71..206
score: 5.1E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 70..206
score: 2.02

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G027510Cucsa.002640Cucumber (Gy14) v1cgycmoB0017
CmoCh04G027510CmaCh04G026270Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G027510CmaCh15G004060Cucurbita maxima (Rimu)cmacmoB308
CmoCh04G027510Cla004689Watermelon (97103) v1cmowmB646
CmoCh04G027510Cla018229Watermelon (97103) v1cmowmB717
CmoCh04G027510Csa5G512870Cucumber (Chinese Long) v2cmocuB716
CmoCh04G027510MELO3C025451Melon (DHL92) v3.5.1cmomeB624
CmoCh04G027510ClCG09G020080Watermelon (Charleston Gray)cmowcgB608
CmoCh04G027510CSPI05G17460Wild cucumber (PI 183967)cmocpiB724
CmoCh04G027510Lsi02G016630Bottle gourd (USVL1VR-Ls)cmolsiB640
CmoCh04G027510Lsi01G014060Bottle gourd (USVL1VR-Ls)cmolsiB626
CmoCh04G027510Cp4.1LG01g23960Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G027510Cp4.1LG13g09700Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G027510MELO3C003110.2Melon (DHL92) v3.6.1cmomedB796
CmoCh04G027510MELO3C025451.2Melon (DHL92) v3.6.1cmomedB713
CmoCh04G027510CsaV3_4G024760Cucumber (Chinese Long) v3cmocucB0832
CmoCh04G027510CsaV3_5G026390Cucumber (Chinese Long) v3cmocucB0848
CmoCh04G027510Cla97C09G181460Watermelon (97103) v2cmowmbB772
CmoCh04G027510Cla97C04G075100Watermelon (97103) v2cmowmbB728
CmoCh04G027510Bhi06G000634Wax gourdcmowgoB0839
CmoCh04G027510CsGy5G017090Cucumber (Gy14) v2cgybcmoB626
CmoCh04G027510CsGy4G013940Cucumber (Gy14) v2cgybcmoB520
CmoCh04G027510Carg04514Silver-seed gourdcarcmoB0940
CmoCh04G027510Carg02360Silver-seed gourdcarcmoB0370
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G027510CmoCh15G004200Cucurbita moschata (Rifu)cmocmoB261
CmoCh04G027510CmoCh07G010200Cucurbita moschata (Rifu)cmocmoB476
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G027510Cucurbita maxima (Rimu)cmacmoB866
CmoCh04G027510Cucurbita pepo (Zucchini)cmocpeB693
CmoCh04G027510Bottle gourd (USVL1VR-Ls)cmolsiB667
CmoCh04G027510Cucumber (Gy14) v2cgybcmoB648
CmoCh04G027510Cucumber (Gy14) v2cgybcmoB649
CmoCh04G027510Melon (DHL92) v3.6.1cmomedB730
CmoCh04G027510Cucumber (Chinese Long) v3cmocucB0869
CmoCh04G027510Wax gourdcmowgoB0833
CmoCh04G027510Wax gourdcmowgoB0874