Cp4.1LG01g23960 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g23960
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionActin-depolymerizing factor family protein
LocationCp4.1LG01 : 19320234 .. 19323557 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGGTTTTTTAGCCGTCTGGGTGATATTATCAATCGCCCCCACCCCAGGGTGAATGGCTTCCACAATTATTATTATTTTATAATTTATAATATATATTAGTTATTTTTTTAATATTAGCAGTCGAATCTCTTAGGCCTTCCGCGGTACAGCCCTCGTTTCCCATCCCATCGTCTTCCTCTCTTCACTCACGCTTCTATCTTCTTTATCGTCTCGTCTGTGGAAGCCCTAAATTTTCTCAACTTTTCTCGCCCTTTCTTTCGCTTTCTCGGAAAAATGGTGAGCTTTTCCTCTTCTTTTCCCTTTTCGATTCATTTATCTGGCTTAGTTTTGTTGATTATTGTTCTTTTTTTGCCATTACTTAATTTGTTTGTTTATTTTTCTCTTCTATGGTTTTCTATTCGATCCTTGGAGTTCTTGGCTGTTTTGAAACGGAATCCTTGTAAATCGCTGCATCGATTGATTTGTTGTTCATTTTGGTCCGCTTGTTTAGTGTTTCAATGGCCTTAGATTGTTGATTATATTGAATACCATGCATTGTTAGCGAGTGGCTAAAAGCATTGGCCACCGTTGATGTAAATCGACTTAGTACATTCTCGTACATTGATCCCTGTTTTCACTGGGACCTTGTGTTGTGACTTCACTTTAAATCCTTTAGTTTATTATTATTTTTAATATTTTCCCCTGCCCGTTAATGATGATAATTATGAGATGTTTGCTTCATCTCAGTGGTTTAAACATTGGTATTTTTGTTGATGGATATAATTCTTATATTGAGATATTTTGCATTGTGTTACCTGAAAGTGTATGATGATTTATCACAAATTTATATAATTTGGAAACCTTCTATTGACGAAGTTGGAAAAGAAGACTGAAGGGTGTTGGATTGGAAAGGAAAACATCTATTTAACTATTTAAATATAGGTTTATCATCATCGGTCCATCTCATTTTGGTATGGTCATTGTCAAAACTCCTTCATGAATCTAAGTTATTTCACTTTGGGATAGTCCATGAGTCGCCCTCTTCTCCCTCATGTTGTTCATCCTTTGTGATTTTCCTTTTATTTCTTAGTTTGCTTCTCCCTTATCACCATCACCATTAGCGTGTGTTTGTTAGGAAATGGGGATAGGACGCTTGTTGGCATAGACTATAGAGCTAAGCATCATATTTGAAGGTGTGATTTGTTTCGGAGTTAAAACTTGTGGCTCTAGAGTTTCAGGGAGGAGCTGGTTAAAATTGTTCTCCTAAACACTCGAGACTAGGGTCACTGTTGGGTACAATGGCAATAAGAAATGAGTATTGAGAAAAGGTCAGAGGATTAAATCCCCCCTGCATTCCATCTCAAAGTTAGGTTTTCTCTCTCCCTACTCCTATCATACTGTAATAAAGTTAGGTTTCTTACAAAAGAATAAAATAAGGAAAAAAAGAGTCGGGAGTTTTACCAAAGGGCTGTTCATACTGTAATAGAACTTCTATAAAAAAGAAACTAGGATCAGATCCCTCTTGCAGGTGCATTGTTATATGAACTTGATTTCTGGGGGCTCTGTTCGTTCAGATGATTTTCATGTGAGTGTTTATTAGAATAACATGATATTAACAACAATGATGAAGACTCCTTGGTAGGGGAAACTCGAGTGGAAGTTAATTGTGAGCTAACCAAAAAACTAGCTCAAAAGTTTGATCCCCAAGCCTACGTGTTGGTAGGGGATTCCCCAAACACTTTGGTGAGAGATTGATGTTTAGTGTTATGCCCTATTCCCCACAGAATGGCGAAGTGAAAAGGATTAGCTGAAAAGATCCTCAAAGAAGAAATCAATTGATGACAAGGACTGGTGTATCATGAAGAGTAGGGGAATGATTTGAAGTCTAGGCCTCCAGAGCCCCTTACATTCCATCTCAAAGTTCTCATGGGACATCTGTAGACCTTATAAGTCAACTTTGGCCCGCATTGTTTTTCCTTGAAAAAAAAAATGGATATGCCTATCATCAAATAAAAAGCTTATTCAATTATGAAAAGGATGTTTTATATAGTTAACTTCCGCAGGAAATAAAGATTTATTATGTACAGATAAAACTTCATCTTATTAACTCATGCGAAGATTGAAAAATATAGATTAGACTTATTAGACTTCTGAAAATTTCACCAACGAAAAAGATTATTTCTAGGGGGCTAGTTTGGATGCATATTTCTCTCTATGGAAATCTGAGGCAGATTCTTCGTTTAAAGAACTGAAAGCTTGGAAAACATTGAGTGACTTTGGGTCTTTAAAGCCGTTGGTGATAGTATCCTAATGGATGTTCATTAGGGTTTCTGAAGAAAATAGGACTTCATAATTTACATTTCTAAATCAATTTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCAAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCAGATGAATGCCGATACGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCCTGGTAAATTTACTACAAACGATTCCTCACTCATTTTATGAATCTGCATTCTAACTCATCATCTACCAACTGCGATGTTTGAAGGTCTCCTGATACATCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGCTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTAAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGGTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTATACCGCCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTATGTGAGTTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGAGCAATCATTTTCGAGTTTCATGTGTTCCATATTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCCTTGTGTAGGCATACGTTTTCTGTGGATCTCTTCCAGTTCATGAATTTAAGGGTGGGATGCTTATTTCAATGGGTTTC

mRNA sequence

ATGTTCGTCGAATCTCTTAGGCCTTCCGCGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCAAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCAGATGAATGCCGATACGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCCTGGTCTCCTGATACATCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGCTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAGGAGGATTTGGCCGGCGAGTCATTGTGATGCAGAGCTGATGTTAATTACGTAAAATGTTCATAGATTGTGGGCTCGAAACTTGCTTTTATGCTATATGATATTGGCTTGTTCTTGAAAAGTTTCACCTAAGAGTTGTAAGGATGACTGGTTTTTTTGGCTTTCGTGGATTTAGTTGGTTGGATATTTTAAATGTGGCTGTGGGGTTATACCGCCGATTACTTATGCAGGGTAAATATGGATCAATGCCCGTTTGAGTATGTGAGTTTGGTTTTATGAAGAGAACCACTAGGAATAATTTGAGCAATCATTTTCGAGTTTCATGTGTTCCATATTTTCTTATCCAAATCATTTCATGATTTCGTGTCATGACTTGCTATATCCTTGTGTAGGCATACGTTTTCTGTGGATCTCTTCCAGTTCATGAATTTAAGGGTGGGATGCTTATTTCAATGGGTTTC

Coding sequence (CDS)

ATGTTCGTCGAATCTCTTAGGCCTTCCGCGGCAAATGCAGCATCAGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAGCAGAAGCAAGTCGTGGTGGAAAAGCTTGGCAAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTACCTGCAGATGAATGCCGATACGCGGTCTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCCTGGTCTCCTGATACATCAAGGGTGAGAAGCAAGATGATATACGCAAGCTCCAAGGACAGGTTCAAGAGGGAGTTGGACGGCATTCAAGTGGAGCTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGGTCTGGCTTGTAG

Protein sequence

MFVESLRPSAANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSGL
Homology
[Close]
BLAST of Cp4.1LG01g23960 vs. Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-65
Identity = 121/138 (87.68%), Postives = 133/138 (96.38%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+FL+LKAKRTYRFI++KIEEKQK+VVVEKLG+P++SYEDF A LP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDF+T+EN QKSRI FIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRSG 149
           QATDPTEMGLDV RSR+G
Sbjct: 122 QATDPTEMGLDVFRSRAG 139

[Close]
BLAST of Cp4.1LG01g23960 vs. Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.3e-65
Identity = 121/137 (88.32%), Postives = 132/137 (96.35%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P++SYEDFAASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
            +ECRYAVYDFDFVT ENCQKSRI FIAW PDT+RVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QA DPTEMGLDVI+SR+
Sbjct: 122 QACDPTEMGLDVIQSRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=1 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 5.9e-63
Identity = 116/136 (85.29%), Postives = 129/136 (94.85%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+G+P  +YEDFAASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSR 147
           QATDPTEM LDV++SR
Sbjct: 122 QATDPTEMDLDVLKSR 137

[Close]
BLAST of Cp4.1LG01g23960 vs. Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.9e-63
Identity = 117/137 (85.40%), Postives = 129/137 (94.16%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAA LP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEM LDV RSR+
Sbjct: 122 QATDPTEMDLDVFRSRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-61
Identity = 113/137 (82.48%), Postives = 131/137 (95.62%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAV D+CKL+FL+LKAKRTYRFI++KI+EK+K VVVEK+G+P  +Y+DFAASLP
Sbjct: 2   ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           A+ECRYA++D+DFVTEENCQKS+I FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTE+GLDVIR R+
Sbjct: 122 QATDPTEVGLDVIRGRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. TrEMBL
Match: A0A0A0KNQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G512870 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 5.9e-70
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPS+SYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRSG 149
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of Cp4.1LG01g23960 vs. TrEMBL
Match: A0A0U4JRK1_ZIZJJ (Actin-depolymerizing factor 1 OS=Ziziphus jujuba GN=ACT1 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.9e-69
Identity = 134/145 (92.41%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 3   VESLRPSAANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSY 62
           V  L+P  ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSY
Sbjct: 194 VRGLQPVQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSY 253

Query: 63  EDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRE 122
           EDF+ASLPA+ECRYAVYDFDFVTEENCQKSRIIFIAWSPD SRVRSKMIYASSKDRFKRE
Sbjct: 254 EDFSASLPANECRYAVYDFDFVTEENCQKSRIIFIAWSPDASRVRSKMIYASSKDRFKRE 313

Query: 123 LDGIQVELQATDPTEMGLDVIRSRS 148
           LDGIQVELQATDPTEMGLDVIRSRS
Sbjct: 314 LDGIQVELQATDPTEMGLDVIRSRS 338

[Close]
BLAST of Cp4.1LG01g23960 vs. TrEMBL
Match: A0A0D2SKK5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G264800 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.9e-67
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSY+DF ASLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYDDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVT ENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEMGLDVIRSR+
Sbjct: 122 QATDPTEMGLDVIRSRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. TrEMBL
Match: A0A061GW84_THECC (Actin depolymerizing factor 4 OS=Theobroma cacao GN=TCM_041889 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.9e-67
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLG+P+QSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPTQSYEDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVT ENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEMGLDVIRSR+
Sbjct: 122 QATDPTEMGLDVIRSRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. TrEMBL
Match: A0A0B0N468_GOSAR (Actin-depolymerizing factor 1 OS=Gossypium arboreum GN=F383_06723 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 7.9e-67
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSY+DF ASLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYDDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVT ENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTAENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEMGLDVIRSR+
Sbjct: 122 QATDPTEMGLDVIRSRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. TAIR10
Match: AT3G46010.2 (AT3G46010.2 actin depolymerizing factor 1)

HSP 1 Score: 241.9 bits (616), Expect = 2.5e-64
Identity = 117/138 (84.78%), Postives = 130/138 (94.20%), Query Frame = 1 

Query: 10  AANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASL 69
           +ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+FAA L
Sbjct: 12  SANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 71

Query: 70  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 129
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 72  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 131

Query: 130 LQATDPTEMGLDVIRSRS 148
           LQATDPTEM LDV RSR+
Sbjct: 132 LQATDPTEMDLDVFRSRA 149

[Close]
BLAST of Cp4.1LG01g23960 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 241.5 bits (615), Expect = 3.3e-64
Identity = 116/136 (85.29%), Postives = 129/136 (94.85%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+G+P  +YEDFAASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD ++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSR 147
           QATDPTEM LDV++SR
Sbjct: 122 QATDPTEMDLDVLKSR 137

[Close]
BLAST of Cp4.1LG01g23960 vs. TAIR10
Match: AT3G46000.1 (AT3G46000.1 actin depolymerizing factor 2)

HSP 1 Score: 233.8 bits (595), Expect = 6.9e-62
Identity = 112/137 (81.75%), Postives = 128/137 (93.43%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+F++LKAKRT+R IV+KIE+  KQV+VEKLG+P QSY+DFAASLP
Sbjct: 2   ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           AD+CRY +YDFDFVT ENCQKS+I FIAWSPDT++VR KMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEMGLDV +SR+
Sbjct: 122 QATDPTEMGLDVFKSRT 136

[Close]
BLAST of Cp4.1LG01g23960 vs. TAIR10
Match: AT5G59880.1 (AT5G59880.1 actin depolymerizing factor 3)

HSP 1 Score: 227.6 bits (579), Expect = 4.9e-60
Identity = 107/137 (78.10%), Postives = 126/137 (91.97%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+F++LK KRT+RFI++KIEE QKQV+VEK+G+P Q++ED AASLP
Sbjct: 2   ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYA++DFDFV+ E   +SRI F+AWSPDT+RVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEM LDV +SR+
Sbjct: 122 QATDPTEMDLDVFKSRA 138

[Close]
BLAST of Cp4.1LG01g23960 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 225.3 bits (573), Expect = 2.4e-59
Identity = 104/139 (74.82%), Postives = 126/139 (90.65%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           AN+ASGM V+D+CK++FL+LKAKRTYRFIVFKI+EK +QV +EKLG P ++Y+DF +S+P
Sbjct: 2   ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
            DECRYAVYDFDF TE+NCQKS+I FIAWSPDTSRVRSKM+YASSKDRFKRE++GIQVEL
Sbjct: 62  DDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRSGL 150
           QATDP+EM LD+I+ R  L
Sbjct: 122 QATDPSEMSLDIIKGRLNL 140

[Close]
BLAST of Cp4.1LG01g23960 vs. NCBI nr
Match: gi|449449972|ref|XP_004142738.1| (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 8.4e-70
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPS+SYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRSG 149
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of Cp4.1LG01g23960 vs. NCBI nr
Match: gi|659127012|ref|XP_008463478.1| (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 2.5e-69
Identity = 134/138 (97.10%), Postives = 137/138 (99.28%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRSG 149
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of Cp4.1LG01g23960 vs. NCBI nr
Match: gi|1021312110|ref|NP_001310792.1| (actin-depolymerizing factor 1-like [Ziziphus jujuba])

HSP 1 Score: 269.2 bits (687), Expect = 4.2e-69
Identity = 134/145 (92.41%), Postives = 140/145 (96.55%), Query Frame = 1 

Query: 3   VESLRPSAANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSY 62
           V  L+P  ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSY
Sbjct: 194 VRGLQPVQANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSY 253

Query: 63  EDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRE 122
           EDF+ASLPA+ECRYAVYDFDFVTEENCQKSRIIFIAWSPD SRVRSKMIYASSKDRFKRE
Sbjct: 254 EDFSASLPANECRYAVYDFDFVTEENCQKSRIIFIAWSPDASRVRSKMIYASSKDRFKRE 313

Query: 123 LDGIQVELQATDPTEMGLDVIRSRS 148
           LDGIQVELQATDPTEMGLDVIRSRS
Sbjct: 314 LDGIQVELQATDPTEMGLDVIRSRS 338

[Close]
BLAST of Cp4.1LG01g23960 vs. NCBI nr
Match: gi|1009120557|ref|XP_015876986.1| (PREDICTED: actin-depolymerizing factor 1-like isoform X7 [Ziziphus jujuba])

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-67
Identity = 131/137 (95.62%), Postives = 136/137 (99.27%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKL+FL+LKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSYEDF+ASLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFSASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           A+ECRYAVYDFDFVTEENCQKSRIIFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ANECRYAVYDFDFVTEENCQKSRIIFIAWSPDASRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEMGLDVIRSRS
Sbjct: 122 QATDPTEMGLDVIRSRS 138

[Close]
BLAST of Cp4.1LG01g23960 vs. NCBI nr
Match: gi|702241997|ref|XP_010047513.1| (PREDICTED: actin-depolymerizing factor 2 [Eucalyptus grandis])

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 1 

Query: 11  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 70
           ANAASGMAVHDDCKLRFL+LKAKRTYRFIVFKIEEKQKQVVVEK+G+P+QSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFTASLP 61

Query: 71  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 130
           ADECRYAVYDFDFVTEENCQKSRI FIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 131 QATDPTEMGLDVIRSRS 148
           QATDPTEMGLDVIRSR+
Sbjct: 122 QATDPTEMGLDVIRSRA 138

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g23960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ADF2_PETHY1.3e-6587.68Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1[more]
ADF1_PETHY6.3e-6588.32Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1[more]
ADF4_ARATH5.9e-6385.29Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=1 SV=2[more]
ADF1_ARATH5.9e-6385.40Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1[more]
ADF7_ORYSJ1.1e-6182.48Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2[more]
BLAST of Cp4.1LG01g23960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNQ1_CUCSA5.9e-7097.83Uncharacterized protein OS=Cucumis sativus GN=Csa_5G512870 PE=3 SV=1[more]
A0A0U4JRK1_ZIZJJ2.9e-6992.41Actin-depolymerizing factor 1 OS=Ziziphus jujuba GN=ACT1 PE=2 SV=1[more]
A0A0D2SKK5_GOSRA7.9e-6794.16Uncharacterized protein OS=Gossypium raimondii GN=B456_013G264800 PE=3 SV=1[more]
A0A061GW84_THECC7.9e-6794.16Actin depolymerizing factor 4 OS=Theobroma cacao GN=TCM_041889 PE=3 SV=1[more]
A0A0B0N468_GOSAR7.9e-6794.16Actin-depolymerizing factor 1 OS=Gossypium arboreum GN=F383_06723 PE=3 SV=1[more]
BLAST of Cp4.1LG01g23960 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G46010.22.5e-6484.78 actin depolymerizing factor 1[more]
AT5G59890.13.3e-6485.29 actin depolymerizing factor 4[more]
AT3G46000.16.9e-6281.75 actin depolymerizing factor 2[more]
AT5G59880.14.9e-6078.10 actin depolymerizing factor 3[more]
AT4G00680.12.4e-5974.82 actin depolymerizing factor 8[more]
BLAST of Cp4.1LG01g23960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449972|ref|XP_004142738.1|8.4e-7097.83PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis sativus][more]
gi|659127012|ref|XP_008463478.1|2.5e-6997.10PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo][more]
gi|1021312110|ref|NP_001310792.1|4.2e-6992.41actin-depolymerizing factor 1-like [Ziziphus jujuba][more]
gi|1009120557|ref|XP_015876986.1|1.8e-6795.62PREDICTED: actin-depolymerizing factor 1-like isoform X7 [Ziziphus jujuba][more]
gi|702241997|ref|XP_010047513.1|2.3e-6794.89PREDICTED: actin-depolymerizing factor 2 [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g23960.1Cp4.1LG01g23960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 23..145
score: 6.6
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 21..148
score: 6.4
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 14..148
score: 38
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 11..146
score: 2.0E
NoneNo IPR availablePANTHERPTHR11913:SF22ACTIN-DEPOLYMERIZING FACTOR 1-RELATEDcoord: 11..146
score: 2.0E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 12..146
score: 1.43

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g23960Cucsa.002640Cucumber (Gy14) v1cgycpeB0016
Cp4.1LG01g23960CmaCh15G004060Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g23960CmaCh04G026270Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g23960CmoCh07G010200Cucurbita moschata (Rifu)cmocpeB814
Cp4.1LG01g23960CmoCh15G004200Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g23960CmoCh04G027510Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g23960Cla004689Watermelon (97103) v1cpewmB381
Cp4.1LG01g23960Csa5G512870Cucumber (Chinese Long) v2cpecuB417
Cp4.1LG01g23960MELO3C025451Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g23960ClCG09G020080Watermelon (Charleston Gray)cpewcgB344
Cp4.1LG01g23960CSPI05G17460Wild cucumber (PI 183967)cpecpiB416
Cp4.1LG01g23960Lsi02G016630Bottle gourd (USVL1VR-Ls)cpelsiB336
Cp4.1LG01g23960Lsi01G014060Bottle gourd (USVL1VR-Ls)cpelsiB324
Cp4.1LG01g23960MELO3C025451.2Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g23960CsaV3_5G026390Cucumber (Chinese Long) v3cpecucB0519
Cp4.1LG01g23960CsaV3_4G024760Cucumber (Chinese Long) v3cpecucB0502
Cp4.1LG01g23960Bhi06G000634Wax gourdcpewgoB0505
Cp4.1LG01g23960CsGy5G017090Cucumber (Gy14) v2cgybcpeB627
Cp4.1LG01g23960Carg04514Silver-seed gourdcarcpeB0965
Cp4.1LG01g23960Carg02360Silver-seed gourdcarcpeB0374
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g23960Cp4.1LG13g09700Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g23960Cp4.1LG19g04390Cucurbita pepo (Zucchini)cpecpeB384
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g23960Wax gourdcpewgoB0499
Cp4.1LG01g23960Wax gourdcpewgoB0541
Cp4.1LG01g23960Cucurbita pepo (Zucchini)cpecpeB407
Cp4.1LG01g23960Cucurbita maxima (Rimu)cmacpeB877