CmoCh04G021070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane Fragile-X-F-associated protein
Location	Cmo_Chr04 : 13502777 .. 13505542 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAGTATAGCGGAATGCTTTGCATTTCTTGTCTGCACGAAGTGGTATAATCCTATGATTCATAGGCATTCTCTTGTTAGAGAATCCAGTTCCTCTTCGCTGACCATTAGATACCTTGACTGGGATAGAGGTGTGGTTGTTTCCTCTGATGAGGTCCAACCCCAAGTCAGAGTTTGTAACTTGCAGGAAATTGGTGGACACATAATGAAGGTTCCTTTAATCATTTTCCAAATCATGCTTTTTATGCGCTTAGAGGTAAATTTTTAAAAAGATGAATTTTAAATGAAATTTTTCTATAGCTTCTGGGTTTCTCATTTCAAACATTTCAATTTCAGGGAACCCCTAGGAGTGCTTCCTATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTATTGCAAGGGGTGGGTTCAGTATTTGCGGCATATAGGTCAATAGAAAAAATTATAATTTTGCTAGTTGGTTCACCTACCTCTGTAAGATATCTTGATATAAGGTCGAAGGCTCGTGAACTGTTAGGGTTCATGCACCATGGATCGAGGTAAATTCTTGAATTTTTGTCTATTTCTTTAGTTGATTCCCAGTTATGCAACTTGAATTGAGTGTAGAATTTACAGGATTATTAGATATTATCCTTTGGTTTATATCAATTTCTTCCTTATTTGTAGGTTGCTAGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAAATTCTGGGTTTGTTTTCGACCTTACTTAACTTCAATCTGATTCTAGGTTTTATCTGATGCCCATGTACACTTCAATATATAATGCTAAGATCAACTCTGGGGAATCATATGGGGCTTCAAGTTATTAAGTTCTCTAAATAGGATCTTGAACCTGGACCTTGGAGAGTATCTCCAACGTATCCAGACCCTTACCATTAGGACGCCCTTCGAATTCGTTGTTGAACCCTTTAAGAATCGCTGTTATACATGTATACTACTTTAATTCACGATTCTATTTTATTTTATCGGTATCATACTTTTTGAGCACGCTACTTACCTGTTGTTTGATCTGGCTCAAATCTAGTAGATTGAGAAATGAAGATTTTGAATGTAAACTATATTCTCGATTGACATTTGTTGTAGCTTGAAATGGAAAGAAGTTGATGAACTTTCTTTGCTTGATACTATAAAGTAGTGAAATTTCTTTGTTCTGTTTTTTCTCCTAATGGTTTGGTATTTCATAGTTTTATCATGTACTTAACAATCCAGGGAAGCCCATATTGACTTTTCCTTATGATTTATAAATTATTTTTTTGTTGGTGATGGAAGAACTTATAAACACTTACGAACTTGTAGCTATGTCTAGTGTTCTTCCTTCTCGTTGATACAAAGATATATTGTCTTCATTATTTTTTCTTTCTTATTCTTGTCTTTAATGCTATTATTCAGGTATGATACCTTCACACCTGAGACTGTAAAGAAAAGGACCAAATCCAATCTAGTTGATGAGGTAAAGAGAACACTATATCTACTTCTGGTTGCCACATATTTACTTCTGGTTGCCACATATTCACGTCCCCCATTTGTGTGCTTTGTTTTGAGGTCATACGAGTACGTAATTTTCAGGACCAACTGATACACACTGTCTACCTCTGTATTTCTTCCAACAATTACGTACTCATAATTTTCAATTTAAATTCTGGTTCCTATCTTGTACTTGGTCCTGCTCAAATGAATTACCTGGGAAGTCTTTGTGAAGTGTTTTCCCTGTAGTGGACTTCTTTATTTTGTTTTCTCGTTACAGATATGGAGATTACAAGCTGCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGCCAGGAGCACGAAAAGCTTCTATATGTAACCTTTTCTGACTCAACTATTTTACTTTTTGAATACTCAGCTATGTTTAACCTATGAGAGAAAGAGAAGCTGTTTTTTCATGGATGGAAAACTATTAAATGTTTCTGGTGGCTGTATTTGAGAATCATTTCTTTAAATTTGGGTCATTACAGGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCGTGTAGGCATCACATTCTTTGCAGGTAATATTCACCTTCTCCTTTGTTCATCTTCTTCATGCTTTAACGCTTTAACTCTAACTGGAAGACTTCTGTATGAATTTGACTGTGTTCGTCACGAATGGGATTTCAGCTCTTGTAGTGAGAAGTGTAATCGTTGCCCAATCTGTCGGGAATCGATCGAAGAACGGCTGCCTGTAAATGATGTTTAGTGAGAAAGCCCCATATTGGTCGGGCTGGCTCAAAGCGCTGGATTGTTGCTTGTGTTTTTTTAGATGGGACAGGCATCAACAGTGTCTAACAACATATGGTGTGTATACAAAATTTCTACACGGACCAGTTTGAAAGTTCACTGAGTGTTGAGTTCCTTGCTTTGGACTGTAATTGAGTGAGAGATTATGTTTTCAGCAAATATTATGGTATCCGTAGTTCACTCAAACTTGTAAATTCGTCAAACTCATGTAACCTTATGACCATTTTACTTATTGTATCAAAAGGAGTTGTTTGATGTCATATATTATCATATCAGAAGGCGATATTATCCCACATAGGCATTGTTCTTGCCACTATGTCCCTTATCACGTAGTGGTGTTCCATTTGACCATTCTTGCAAAATCCACCGCCAAGAATCTTACGACTTTTTATCAAGTTTTCCTTTCACCTCTTACATAA

mRNA sequence

ATGTGCAGTATAGCGGAATGCTTTGCATTTCTTGTCTGCACGAAGTGGTATAATCCTATGATTCATAGGCATTCTCTTGTTAGAGAATCCAGTTCCTCTTCGCTGACCATTAGATACCTTGACTGGGATAGAGGTGTGGTTGTTTCCTCTGATGAGGTCCAACCCCAAGTCAGAGTTTGTAACTTGCAGGAAATTGGTGGACACATAATGAAGGTTCCTTTAATCATTTTCCAAATCATGCTTTTTATGCGCTTAGAGCTTCTGGGTTTCTCATTTCAAACATTTCAATTTCAGGGAACCCCTAGGAGTGCTTCCTATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTATTGCAAGGGGTGGGTTCAGTATTTGCGGCATATAGGTCAATAGAAAAAATTATAATTTTGCTAGTTGGTTCACCTACCTCTGTAAGATATCTTGATATAAGGTCGAAGGCTCGTGAACTGTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAAATTCTGGGTATGATACCTTCACACCTGAGACTGTAAAGAAAAGGACCAAATCCAATCTAGTTGATGAGATATGGAGATTACAAGCTGCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGCCAGGAGCACGAAAAGCTTCTATATGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCGTGTAGGCATCACATTCTTTGCAGACTTCTGTATGAATTTGACTGTGTTCGTCACGAATGGGATTTCAGCTCTTGTAGTGAGAAGTGTAATCGTTGCCCAATCTGTCGGGAATCGATCGAAGAACGGCTGCCTATGGGACAGGCATCAACAGTGTCTAACAACATATGGTGTGTATACAAAATTTCTACACGGACCAAAGGCGATATTATCCCACATAGGCATTGTTCTTGCCACTATGTCCCTTATCACGTAGTGGTGTTCCATTTGACCATTCTTGCAAAATCCACCGCCAAGAATCTTACGACTTTTTATCAAGTTTTCCTTTCACCTCTTACATAA

Coding sequence (CDS)

ATGTGCAGTATAGCGGAATGCTTTGCATTTCTTGTCTGCACGAAGTGGTATAATCCTATGATTCATAGGCATTCTCTTGTTAGAGAATCCAGTTCCTCTTCGCTGACCATTAGATACCTTGACTGGGATAGAGGTGTGGTTGTTTCCTCTGATGAGGTCCAACCCCAAGTCAGAGTTTGTAACTTGCAGGAAATTGGTGGACACATAATGAAGGTTCCTTTAATCATTTTCCAAATCATGCTTTTTATGCGCTTAGAGCTTCTGGGTTTCTCATTTCAAACATTTCAATTTCAGGGAACCCCTAGGAGTGCTTCCTATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTATTGCAAGGGGTGGGTTCAGTATTTGCGGCATATAGGTCAATAGAAAAAATTATAATTTTGCTAGTTGGTTCACCTACCTCTGTAAGATATCTTGATATAAGGTCGAAGGCTCGTGAACTGTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAAATTCTGGGTATGATACCTTCACACCTGAGACTGTAAAGAAAAGGACCAAATCCAATCTAGTTGATGAGATATGGAGATTACAAGCTGCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGCCAGGAGCACGAAAAGCTTCTATATGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCGTGTAGGCATCACATTCTTTGCAGACTTCTGTATGAATTTGACTGTGTTCGTCACGAATGGGATTTCAGCTCTTGTAGTGAGAAGTGTAATCGTTGCCCAATCTGTCGGGAATCGATCGAAGAACGGCTGCCTATGGGACAGGCATCAACAGTGTCTAACAACATATGGTGTGTATACAAAATTTCTACACGGACCAAAGGCGATATTATCCCACATAGGCATTGTTCTTGCCACTATGTCCCTTATCACGTAGTGGTGTTCCATTTGACCATTCTTGCAAAATCCACCGCCAAGAATCTTACGACTTTTTATCAAGTTTTCCTTTCACCTCTTACATAA

Homology

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BLAST of CmoCh04G021070 vs. Swiss-Prot
Match: KN7M_ARATH (Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana GN=KIN7M PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 8.7e-07
Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = 1


Query: 243  LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERL 302
            +C+VCF+ P   +LLPCRH  LC+               SCS  C+ CPICR  I +RL
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCK---------------SCSLACSECPICRTKISDRL 1053

[Close]

BLAST of CmoCh04G021070 vs. Swiss-Prot
Match: KN7D_ARATH (Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana GN=KIN7D PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-06
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 1


Query: 215  RLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPIDMVLLPCRHHILCRLLYEFDCV 274
            RL+A + +  E    S+   +   +   +C+VCF+ P   +LLPCRH  LC+        
Sbjct: 982  RLKARMQEMKEKEMKSQANGDANSH---ICKVCFESPTAAILLPCRHFCLCK-------- 1041

Query: 275  RHEWDFSSCSEKCNRCPICRESIEERL 302
                   SCS  C+ CPICR  I +RL
Sbjct: 1042 -------SCSLACSECPICRTKISDRL 1050

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BLAST of CmoCh04G021070 vs. TrEMBL
Match: A0A0B0PG00_GOSAR (RING finger B OS=Gossypium arboreum GN=F383_09206 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.8e-104
Identity = 198/301 (65.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQ-VRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIRYLDW+RG+V+SSDE   Q  R+CNL
Sbjct: 45  IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRYLDWNRGLVISSDEDSHQNSRICNL 104

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P I FQIMLFM LE            GTP SA  I   V FSPL LLQG 
Sbjct: 105 QDIGGHVMKIPFICFQIMLFMHLE------------GTPPSARNISPPVFFSPLLLLQGA 164

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 165 GVAHAAYRLIEKIVILLHSGARSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSREEQ 224

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 225 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKCSQQEFERLQYEKI 284

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 285 LCRVCFEEQISVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 318

[Close]

BLAST of CmoCh04G021070 vs. TrEMBL
Match: A0A0D2REQ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.0e-103
Identity = 195/301 (64.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE-VQPQVRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE      R+CNL
Sbjct: 192 IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDEDSHHNSRICNL 251

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P   FQIMLFM+LE            GTP SA  I   +LFSPL LLQG 
Sbjct: 252 QDIGGHVMKIPFFCFQIMLFMQLE------------GTPPSARNISTPILFSPLLLLQGA 311

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 312 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 371

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 372 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 431

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 432 LCRVCFEEQICVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 465

[Close]

BLAST of CmoCh04G021070 vs. TrEMBL
Match: A0A0D2RL54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.0e-103
Identity = 195/301 (64.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE-VQPQVRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE      R+CNL
Sbjct: 193 IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDEDSHHNSRICNL 252

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P   FQIMLFM+LE            GTP SA  I   +LFSPL LLQG 
Sbjct: 253 QDIGGHVMKIPFFCFQIMLFMQLE------------GTPPSARNISTPILFSPLLLLQGA 312

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 313 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 372

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 373 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 432

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 433 LCRVCFEEQICVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 466

[Close]

BLAST of CmoCh04G021070 vs. TrEMBL
Match: D7T9A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02950 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.7e-102
Identity = 188/300 (62.67%), Postives = 229/300 (76.33%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQVRVCNLQ 63
           IAECFA +VCT+WYNP IHR+S +R++ SSS+ IRYLDW+ G+VVSSDE Q Q R+C+LQ
Sbjct: 190 IAECFASIVCTRWYNPAIHRNSHIRQTGSSSMIIRYLDWNSGLVVSSDEDQHQSRLCDLQ 249

Query: 64  EIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGVG 123
           +IGGHIMK+PL+ FQI+LFMRLE            GTP SA +IP  +LF+PLFLLQG+G
Sbjct: 250 DIGGHIMKIPLVGFQILLFMRLE------------GTPSSARHIPIPLLFAPLFLLQGIG 309

Query: 124 SVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQA 183
            +FA YR +EKI++LL  +  + RY  I SK R   GF+HHGSRLLGWWSIDEGS+EEQA
Sbjct: 310 VLFALYRLVEKIVLLLHSAAGTERYFAISSKVRSYFGFLHHGSRLLGWWSIDEGSREEQA 369

Query: 184 KLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKIL 243
           +LY AG SGY+TF+P+TVKK  KS+L +EIWRLQAAL +QTE+TK S+QE E+L  EKIL
Sbjct: 370 RLYYAGASGYNTFSPDTVKKLPKSDLAEEIWRLQAALGEQTEITKFSQQEFERLQNEKIL 429

Query: 244 CRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLPM 303
           CRVCFDE I+MVLLPCRHH+LC               S+C EKC RCPICR  IEERLP+
Sbjct: 430 CRVCFDEQINMVLLPCRHHVLC---------------STCCEKCKRCPICRVFIEERLPV 462

[Close]

BLAST of CmoCh04G021070 vs. TrEMBL
Match: A0A061EIQ6_THECC (Transmembrane Fragile-X-F-associated protein OS=Theobroma cacao GN=TCM_011872 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.9e-99
Identity = 189/301 (62.79%), Postives = 225/301 (74.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQ-VRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ES+ SS+TIRYLDW+RG VVSSDE + Q  R+CNL
Sbjct: 192 IAECFAFLVCTKWYNPAIHRNSHLGESTPSSMTIRYLDWNRGFVVSSDEDRHQNSRMCNL 251

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P I FQIMLFM LE            GTP SA  I   VLFSPL LLQG 
Sbjct: 252 QDIGGHVMKIPFIGFQIMLFMHLE------------GTPPSARNISPPVLFSPLLLLQGA 311

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
             + AAYR IEKI+IL+ G   S RY D+ SK  E  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 312 AVILAAYRLIEKIVILVHGGAGSGRYFDVSSKVLEFFGFLHHGSRLLGWWSIDEGSREEQ 371

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +  SGY+TF+P+ VKK  KS+LV+EIWRL+AAL++QTE+TK S+QE E+L  EKI
Sbjct: 372 ARLYCSEASGYNTFSPDVVKKMPKSDLVEEIWRLRAALSEQTEITKFSQQEFERLQNEKI 431

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I++VLLPCRHH+LC               S+C E+C RCPICR SIEERLP
Sbjct: 432 LCRVCFEEQINVVLLPCRHHVLC---------------STCCERCKRCPICRVSIEERLP 465

[Close]

BLAST of CmoCh04G021070 vs. TAIR10
Match: AT1G68820.1 (AT1G68820.1 Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-98
Identity = 179/302 (59.27%), Postives = 223/302 (73.84%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSD-EVQPQVRVCNL 63
           IAECFAFLVCTKW N  IHR+S + E SSSS+ +RYLDW+RG+VV++D E Q   R+C L
Sbjct: 191 IAECFAFLVCTKWSNQSIHRYSHIPEPSSSSMVVRYLDWNRGLVVTADDEHQQSNRICGL 250

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P + FQI+LFMRLE            GTP SA  IP LVLF PLFLLQG 
Sbjct: 251 QDIGGHVMKIPFVTFQIILFMRLE------------GTPASAKNIPILVLFVPLFLLQGA 310

Query: 124 GSVFAAYRSIEKIIILL-VGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEE 183
           G +FA YR +EK ++L+  GS +  RY    S ARE LGF  HG+RLLGWWSIDEGS+EE
Sbjct: 311 GVLFAMYRLVEKSVLLINSGSGSYGRYFTATSSAREFLGFFQHGARLLGWWSIDEGSREE 370

Query: 184 QAKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEK 243
           QA+LYS   +GY+TF+PE VKK  KS+LV+EIWRLQAAL++QT++T  S+QE+E+L  EK
Sbjct: 371 QARLYSGEATGYNTFSPEVVKKMPKSDLVEEIWRLQAALSEQTDITSYSQQEYERLQNEK 430

Query: 244 ILCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERL 303
           ILCRVCF++PI++VLLPCRHH+LC               S+C EKC +CPICR  IEER+
Sbjct: 431 ILCRVCFEDPINVVLLPCRHHVLC---------------STCCEKCKKCPICRVLIEERM 465

[Close]

BLAST of CmoCh04G021070 vs. TAIR10
Match: AT1G73950.1 (AT1G73950.1 Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 331.3 bits (848), Expect = 7.9e-91
Identity = 170/303 (56.11%), Postives = 212/303 (69.97%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQVRVCNLQ 63
           IAECFAFLVCTKW NP+IHR S  RE+ SSS  IRYLDW+ G+ V S++ + Q   C LQ
Sbjct: 189 IAECFAFLVCTKWSNPVIHRSSRDRETGSSSTNIRYLDWNSGLGVFSEDDRNQ-DTCGLQ 248

Query: 64  EIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGVG 123
           +IGGHIMK+PLI+FQ++L M LE            GTP +A  I   VLFSPLFLLQGVG
Sbjct: 249 DIGGHIMKIPLIVFQVVLCMHLE------------GTPEAAKSISVPVLFSPLFLLQGVG 308

Query: 124 SVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQA 183
            +FAA + IEK+++LL G   +  Y    S+A + LGF+HHGSRLLGWWSIDEGS+EE+A
Sbjct: 309 VLFAASKLIEKVVLLLRGEDDTGLYFRFLSRAHDCLGFLHHGSRLLGWWSIDEGSREEEA 368

Query: 184 KLYSAGNSGYDTF---TPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYE 243
           +LY    SGY+TF    PE VKK  K  L +E+WRLQAAL +QTE+TK S+QE+E+L  E
Sbjct: 369 RLYFDQESGYNTFCGHPPEIVKKMPKKELAEEVWRLQAALGEQTEITKFSQQEYERLQNE 428

Query: 244 KILCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEER 303
           K+LCRVCF+  I +VLLPCRH +LCR               +CS+KC +CP CR +IEER
Sbjct: 429 KVLCRVCFEREISVVLLPCRHRVLCR---------------NCSDKCKKCPFCRITIEER 463

[Close]

BLAST of CmoCh04G021070 vs. TAIR10
Match: AT1G18470.1 (AT1G18470.1 Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 328.9 bits (842), Expect = 3.9e-90
Identity = 167/301 (55.48%), Postives = 212/301 (70.43%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQVRVCNLQ 63
           IAECFAFLVCTKW NP+IHR S  RE+ SSS +IRYLDW+ G+VV+ +E + Q R C LQ
Sbjct: 189 IAECFAFLVCTKWSNPVIHRSSRARETGSSSTSIRYLDWNSGLVVAPEEDRHQDRWCGLQ 248

Query: 64  EIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGVG 123
           +IGGH++K+P+I+FQ++L M LE            GTP  A  I   VLFSPLFLLQG+G
Sbjct: 249 DIGGHMLKIPVILFQVVLCMYLE------------GTPERAKDISIPVLFSPLFLLQGLG 308

Query: 124 SVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQA 183
            +FAA + +EKI++LL G      Y    S A + LGF+HHGSRLLGWWSIDEGS+EEQA
Sbjct: 309 VLFAASKLLEKIVLLLRGEAGPGLYFRFSSSAHDCLGFLHHGSRLLGWWSIDEGSREEQA 368

Query: 184 KLYSAGNSGYDTFT---PETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYE 243
           +LY    SGY+TF+   PE VKK  K +L +E+WRLQAAL +QTE+TK S+QE+E+L  E
Sbjct: 369 RLYFDQESGYNTFSGHPPEIVKKMPKEDLAEEVWRLQAALGEQTEITKFSQQEYERLQNE 428

Query: 244 KILCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEER 302
           K+LCRVCF++ I +VLLPCRH +LCR               +C++KC  CPICR  IE+R
Sbjct: 429 KVLCRVCFEKDISLVLLPCRHRVLCR---------------TCADKCTTCPICRIDIEKR 462

[Close]

BLAST of CmoCh04G021070 vs. TAIR10
Match: AT2G21380.1 (AT2G21380.1 Kinesin motor family protein)

HSP 1 Score: 56.2 bits (134), Expect = 4.9e-08
Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = 1


Query: 243  LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERL 302
            +C+VCF+ P   +LLPCRH  LC+               SCS  C+ CPICR  I +RL
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCK---------------SCSLACSECPICRTKISDRL 1053

[Close]

BLAST of CmoCh04G021070 vs. TAIR10
Match: AT4G39050.1 (AT4G39050.1 Kinesin motor family protein)

HSP 1 Score: 55.5 bits (132), Expect = 8.3e-08
Identity = 30/87 (34.48%), Postives = 43/87 (49.43%), Query Frame = 1


Query: 215  RLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPIDMVLLPCRHHILCRLLYEFDCV 274
            RL+A + +  E    S+   +   +   +C+VCF+ P   +LLPCRH  LC+        
Sbjct: 982  RLKARMQEMKEKEMKSQANGDANSH---ICKVCFESPTAAILLPCRHFCLCK-------- 1041

Query: 275  RHEWDFSSCSEKCNRCPICRESIEERL 302
                   SCS  C+ CPICR  I +RL
Sbjct: 1042 -------SCSLACSECPICRTKISDRL 1050

[Close]

BLAST of CmoCh04G021070 vs. NCBI nr
Match: gi|728845940|gb|KHG25383.1| (RING finger B [Gossypium arboreum])

HSP 1 Score: 387.5 bits (994), Expect = 2.6e-104
Identity = 198/301 (65.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQ-VRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIRYLDW+RG+V+SSDE   Q  R+CNL
Sbjct: 45  IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRYLDWNRGLVISSDEDSHQNSRICNL 104

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P I FQIMLFM LE            GTP SA  I   V FSPL LLQG 
Sbjct: 105 QDIGGHVMKIPFICFQIMLFMHLE------------GTPPSARNISPPVFFSPLLLLQGA 164

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 165 GVAHAAYRLIEKIVILLHSGARSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSREEQ 224

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 225 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKCSQQEFERLQYEKI 284

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 285 LCRVCFEEQISVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 318

[Close]

BLAST of CmoCh04G021070 vs. NCBI nr
Match: gi|823157483|ref|XP_012478626.1| (PREDICTED: uncharacterized protein LOC105794150 isoform X1 [Gossypium raimondii])

HSP 1 Score: 384.0 bits (985), Expect = 2.9e-103
Identity = 195/301 (64.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE-VQPQVRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE      R+CNL
Sbjct: 195 IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDEDSHHNSRICNL 254

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P   FQIMLFM+LE            GTP SA  I   +LFSPL LLQG 
Sbjct: 255 QDIGGHVMKIPFFCFQIMLFMQLE------------GTPPSARNISTPILFSPLLLLQGA 314

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 315 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 374

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 375 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 434

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 435 LCRVCFEEQICVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 468

[Close]

BLAST of CmoCh04G021070 vs. NCBI nr
Match: gi|763763077|gb|KJB30331.1| (hypothetical protein B456_005G137800 [Gossypium raimondii])

HSP 1 Score: 384.0 bits (985), Expect = 2.9e-103
Identity = 195/301 (64.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE-VQPQVRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE      R+CNL
Sbjct: 193 IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDEDSHHNSRICNL 252

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P   FQIMLFM+LE            GTP SA  I   +LFSPL LLQG 
Sbjct: 253 QDIGGHVMKIPFFCFQIMLFMQLE------------GTPPSARNISTPILFSPLLLLQGA 312

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 313 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 372

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 373 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 432

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 433 LCRVCFEEQICVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 466

[Close]

BLAST of CmoCh04G021070 vs. NCBI nr
Match: gi|823157487|ref|XP_012478628.1| (PREDICTED: uncharacterized protein LOC105794150 isoform X3 [Gossypium raimondii])

HSP 1 Score: 384.0 bits (985), Expect = 2.9e-103
Identity = 195/301 (64.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE-VQPQVRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE      R+CNL
Sbjct: 124 IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDEDSHHNSRICNL 183

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P   FQIMLFM+LE            GTP SA  I   +LFSPL LLQG 
Sbjct: 184 QDIGGHVMKIPFFCFQIMLFMQLE------------GTPPSARNISTPILFSPLLLLQGA 243

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 244 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 303

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 304 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 363

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 364 LCRVCFEEQICVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 397

[Close]

BLAST of CmoCh04G021070 vs. NCBI nr
Match: gi|823157485|ref|XP_012478627.1| (PREDICTED: uncharacterized protein LOC105794150 isoform X2 [Gossypium raimondii])

HSP 1 Score: 384.0 bits (985), Expect = 2.9e-103
Identity = 195/301 (64.78%), Postives = 228/301 (75.75%), Query Frame = 1


Query: 4   IAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE-VQPQVRVCNL 63
           IAECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE      R+CNL
Sbjct: 192 IAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDEDSHHNSRICNL 251

Query: 64  QEIGGHIMKVPLIIFQIMLFMRLELLGFSFQTFQFQGTPRSASYIPCLVLFSPLFLLQGV 123
           Q+IGGH+MK+P   FQIMLFM+LE            GTP SA  I   +LFSPL LLQG 
Sbjct: 252 QDIGGHVMKIPFFCFQIMLFMQLE------------GTPPSARNISTPILFSPLLLLQGA 311

Query: 124 GSVFAAYRSIEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 183
           G   AAYR IEKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 312 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 371

Query: 184 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 243
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 372 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 431

Query: 244 LCRVCFDEPIDMVLLPCRHHILCRLLYEFDCVRHEWDFSSCSEKCNRCPICRESIEERLP 303
           LCRVCF+E I +VLLPCRHH+LC               S+C EKC RCPICR SIEERLP
Sbjct: 432 LCRVCFEEQICVVLLPCRHHVLC---------------STCCEKCKRCPICRVSIEERLP 465

The following BLAST results are available for this feature:

BLAST of CmoCh04G021070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KN7M_ARATH	8.7e-07	42.37	Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana GN=KIN7M PE=2...	[more]
KN7D_ARATH	1.5e-06	34.48	Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana GN=KIN7D PE=2...	[more]

BLAST of CmoCh04G021070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B0PG00_GOSAR	1.8e-104	65.78	RING finger B OS=Gossypium arboreum GN=F383_09206 PE=4 SV=1	[more]
A0A0D2REQ6_GOSRA	2.0e-103	64.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1	[more]
A0A0D2RL54_GOSRA	2.0e-103	64.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1	[more]
D7T9A1_VITVI	1.7e-102	62.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02950 PE=4 SV=...	[more]
A0A061EIQ6_THECC	3.9e-99	62.79	Transmembrane Fragile-X-F-associated protein OS=Theobroma cacao GN=TCM_011872 PE...	[more]

BLAST of CmoCh04G021070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68820.1	1.3e-98	59.27	Transmembrane Fragile-X-F-associated protein	[more]
AT1G73950.1	7.9e-91	56.11	Transmembrane Fragile-X-F-associated protein	[more]
AT1G18470.1	3.9e-90	55.48	Transmembrane Fragile-X-F-associated protein	[more]
AT2G21380.1	4.9e-08	42.37	Kinesin motor family protein	[more]
AT4G39050.1	8.3e-08	34.48	Kinesin motor family protein	[more]

BLAST of CmoCh04G021070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|728845940\|gb\|KHG25383.1\|	2.6e-104	65.78	RING finger B [Gossypium arboreum]	[more]
gi\|823157483\|ref\|XP_012478626.1\|	2.9e-103	64.78	PREDICTED: uncharacterized protein LOC105794150 isoform X1 [Gossypium raimondii]	[more]
gi\|763763077\|gb\|KJB30331.1\|	2.9e-103	64.78	hypothetical protein B456_005G137800 [Gossypium raimondii]	[more]
gi\|823157487\|ref\|XP_012478628.1\|	2.9e-103	64.78	PREDICTED: uncharacterized protein LOC105794150 isoform X3 [Gossypium raimondii]	[more]
gi\|823157485\|ref\|XP_012478627.1\|	2.9e-103	64.78	PREDICTED: uncharacterized protein LOC105794150 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR019396	TM_Fragile-X-F-assoc

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021070.1	CmoCh04G021070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 244..294 score: 9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 228..300 score: 3.
IPR019396	Transmembrane Fragile-X-F-associated protein	PFAM	PF10269	Tmemb_185A	coord: 4..119 score: 8.6
None	No IPR available	PANTHER	PTHR10044	INHIBITOR OF APOPTOSIS	coord: 281..303 score: 1.1E-147coord: 4..265 score: 1.1E
None	No IPR available	PANTHER	PTHR10044:SF122	SUBFAMILY NOT NAMED	coord: 4..265 score: 1.1E-147coord: 281..303 score: 1.1E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 234..301 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021070	CmaCh04G020060	Cucurbita maxima (Rimu)	cmacmoB741
CmoCh04G021070	Cp4.1LG01g17670	Cucurbita pepo (Zucchini)	cmocpeB685

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021070	Cucumber (Gy14) v2	cgybcmoB668
CmoCh04G021070	Melon (DHL92) v3.6.1	cmomedB727
CmoCh04G021070	Silver-seed gourd	carcmoB1141
CmoCh04G021070	Cucumber (Chinese Long) v3	cmocucB0889
CmoCh04G021070	Watermelon (97103) v2	cmowmbB731
CmoCh04G021070	Wax gourd	cmowgoB0900
CmoCh04G021070	Cucurbita moschata (Rifu)	cmocmoB338
CmoCh04G021070	Cucumber (Gy14) v1	cgycmoB0796
CmoCh04G021070	Wild cucumber (PI 183967)	cmocpiB762
CmoCh04G021070	Cucumber (Chinese Long) v2	cmocuB754
CmoCh04G021070	Melon (DHL92) v3.5.1	cmomeB642
CmoCh04G021070	Watermelon (Charleston Gray)	cmowcgB657
CmoCh04G021070	Watermelon (97103) v1	cmowmB696
CmoCh04G021070	Cucurbita pepo (Zucchini)	cmocpeB652
CmoCh04G021070	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021070	Cucurbita pepo (Zucchini)	cmocpeB682
CmoCh04G021070	Bottle gourd (USVL1VR-Ls)	cmolsiB618
CmoCh04G021070	Bottle gourd (USVL1VR-Ls)	cmolsiB665