Cp4.1LG01g17670 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g17670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane Fragile-X-F-associated protein
Location	Cp4.1LG01 : 13201864 .. 13209585 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTTAATTAAACGTCTTTTTCCTCCTTTCGCGTAAAAGCAAAGTGTTGAAATGAAACCGCTGGCGCTCGGGAATATTTGTTAACCCCACCTTCCACTGCCCCATTTCAATTTTTTTCTCAATTTCAGCGTTGAGGCCGAACTTTCTTAGAAAGAGAGGTGGAGGGGGTTGAGGAGAGGACTCCAGTTCTCTCTCTTTTGCTTAATCTTTTCTGAACAGACCAAATTCTTCTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGTATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTTTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGGTTCGTACCTCTCTCAATTCCTTATTCAACTTTTCTGTTTCTTTTGCAGAATATTAGTGGAACCCATTTGTAATTTTGTGTAATTTGAACTTTTTTGGGTCTGAATTCTGAAGTTCCTTCATTATTTGGTGGTATGGAGAATGTAGAAATGAATTTGGAGGTGTTAGCCTGATATCTCGCTAGCATTTTGTTGTGTTTCTCTGCTCTTATCTTCTGCTAACAATTTCTGCCCTGCTTTGTTTTTCTACCTCATAAGGAAATTTGAATATAAAAAAGTTTCTGAGGCTCTGTTTGCTTGGATTTGATTGGTCATTTGTATTACTTTCTGGTATGGGTGGAGGGGCCTGCATATGGGCTTGGGTTTGAACTCCCAAACGAAGTTATTTCACTGTCTGGTGGGTATTATAGAGAAACCTGCATCTGGGTCCCACCTAATTTGAAAGGCCTTGGTTAATCGTTTCTGAAATTTCATCTCTGTGCTTGTGTTGAAAAGAAGGTTGCGGCATTTATTTCCACTCTTGGGTATATTTAAGGGTAAATTTCAGATGGGCACTCATAATCTCTGGCTATTGAGATTTGGCTTGCTAATACCTGTCAGCTGTCATTACATAAACTTGCTTTTTAAGAGGACGGGAAGTCTTATATTATGAAATTAGAACATTACTGTAATATATTGTGACTGTGCGTCTATAATATATTTGTCTTGACATGGAATTGTGGAAGAACAATATCCAGCCATAACTTGAATGTAGAGGAGTCTTATGCAATACCAAAATCTAGAGCTCGTTTAGTCCTTTATAAGGCCTAGTTTGAAGTAGGTTCAAATATTGAAGAGTGTCTTCTTGGGTTTAGTCTGGAACTCTGGGGTAGTTTATGGTTTGTTCATATGAATGCAAGTTACATTGCAATTCATGCTTAACATGGTTAACTCAGCCCTAGATATGCATGAAGATTTTTTTCTTTGCCATGAATGAGCTGCCATTTACATGTTCTATTATTTTCTCTTTGGAGATTTGTGGGAATGCATTGGAAAAGTCCTTCCCGCTCTTAACATCTGAATTAATAGATAGAATCAATTTATCCTTTTTGTCTGCAGGGTTGTCTTTTCACCCCTATGGCTTTTTCATTTAGTTGCAGCAAGAGGCAGATTTTCTCTACCTGCTCCATCAATGCCTCATGACCGATATGTATGTGATTCGTCTACTTTGTTTTCTAAGCTCATATAACCTAACCAATTTCATTTTGTTCTTCCTCGGTAAAGAACACAAATTTAAACATTCCTTTGTGATGCACAGTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCTTTCGAAGTACTTCTTTGTATATATTTAGAGTGCAGTAATGGTAGGTAGTCTCTTTAGTTATTGTTTCTCCTTGGGCTTGTGGAGTGTTTGATTCCATGTATTGGAAGTTTTTCTTGCTTGTAGGCTCATTAATATGGGTCCACTAGAATAAAGTGATACTATTTCATAATAATCACTCGTACTTTAATCTTAATGCAGCTTAATTTTACTGCAGTTATAGATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGATAGCAATTTTGGTCGACAATATCAGGTACAATCATGTTCTTCCACACGATCATGAATTCTTCGTCAATTGTTCTTTTTTTTACCTCTAAGGCTCTGGAAAATTGGAATACACAATTTTATTGTATATGTATTTTTCCTTTGGAGAAAGACATATTTTCCATTTGAGATGAAGTACAAAAAAGAGGATGAGGCATCCTCAAACCCATCGTGGATGCTTACGCAATGCACCCTAATTAGCACCAATATCTAAGAAAAAGTAATTACAGAAAAAGTTACAAAGAGAACTCTGTGTCTTGACTGTTATTCACTAATTGAATAAATAATTGTGCAACTCTGTTATTACGTATCCAAGACTAAAAGTAAAAAAGATTACTTCAACCTTTGGTGATTTGATATTTCTTTGTGATTTTCTCTCCATTTTTCTTTGAGCTAAAATATTTCAGTAATTTTCATTATATCATATTTACTTCATTTTCAATTATATGAATTTTTTCTTGTAGGATGTGTAGAGCCTTACTGCCTGGAGATGAAGAAGACAACGTAAGCGATGAAGTTATATGGGAAACGCTTCCTGTAAGTTGGATTGGAAAATTATTCTTTTGCATATAATGCTGAATGTCAATCAAAATCTCAGCATCATTGATTTACCATCATATGCTATTGTCTGGGGAGTACTACTTAGGTTTTTGCATGGTGATGACTGATTATTAAGAAAACAACGCTTTCTTTTAGCACGCTGCCCTTAGACATGCTACAGTTCCCAAGAGTTTCATCAACTTTTTAGATTAAAATTTCCATTATTTGGATAGCTCCTTTTGCTGTACAATTGAAAACGATTTACAAAGGATGGGACTATGGTGTGGTATCATCATTGGAATAGCTATGCTTTTACTTTTTATTTTTTATTTTTATTTTGAGGTCTTTGTGCTTGATTAAAGCTAGTGAAAAAGGTAAAAGGGCTTAAAGCTAAAGGAATTATTAAGGCTATTCCTGCTTATTCCAGTTGAAATGACACGATACTTTTTCTGGTTATTATCTAACATATCCTTGAAAGAGCCATGTAATGATTATCTTGATTCTTGGTCATCCTGTATAAGTCTTAGAAAATTAGGTTGTTTGGGCTATTATATTCAAGTGTTTGGTTTTTACACGTTTCATGTATATATATATATATATATTTGCTATGATATTTTGATACTGAGTTATTGATCTCTGGTTCCAGCACTTCTGGGTCTCAATCTCCATGGTTTTCTTCATCGCTGCAACCCTTTTCACTCTTCTTAAGCTTAGTGGTATGTTTACCTCTTCTCAAATGAACTAAGATTATTAGTCATATTAAGTTGGTACTCACAGTCTTATAGCAACTAGGTCTAGGTCCATTAATTGCTCACCATCTTGACTTTCTGATTGTTATTTTTATGGCTATACTTTACAAGACCATTTATACTAAAGATCTCTGGATGTACGTCATAATGTGTCTTCAGAGTATCAAAGCTCTTGCAGCAAGTTTTTTTTTTAAATTACTTGAAAAGATTGTGACCTGTTAGTTCAGATCGGGGTTTAAAATTACTTGAGCCTTTTGGGTTCTTGATGGGGTAAAATGAACATTTTAGTGCTTTTTTTAATAGGAAACTAAAAATATTATTAACAGAGCCAAGAATAAAGATAGAAAAAAGGGGGATGAGATATTCCCACAAAACCAAGGGGTTACAAAATAGAATCCCAATGGATATGACCATATGAATAAGTATTTTCGTGCACTTAAGTTTATATTCGAAGCTTCATCGCGAGAATATTCTTATGATAATTTTAGTGTTATAGACATGTAACAAGTGGAGGATGCACGGGATAAATTTCTAATTTTTAAATTGATATGAGCTCTGTTTGATAATAATTGTTTTTAAGTTTTATGTTTCATTAAATTAAGGTAGATAATGATTTGCCTGTTCTACTTTCTAGTTTTAGCACACTGTTGAAATATTGACAAAACTTCCAACTTTTTCTAAAAGAACTACTATTTTTAGAGTTTAGGCTTTTGCTATGTTTTAAGAAGCATTTTTACTAGTAGAATGGAAAATAAAAAAGAAAAATAAAATAAAACAACCTTAATTTCAAAACGGCGCTTCCCATCATTATATCTTTGAGCGAAAACATGCTATTGACATGCGTGCATGCGACAGGAACTCGCTAGGGAAACTTAAAAGAAGAATAAACATTAGGGAGACTCAGTAAACCATAATCAAAAGGGGCATGATCTGTAATACTTGTTCTGTGAACAGTATCATATTGTTGATATGCCTGCAAGTGATACAAACAGTAGGGAGGCTCATTTAACCTTCACAGACTGATAAAAAACACACTCCTTTTTTATGCAGGCAGTGTAGCTGCTCTGGGCTGGTGGGATCTATTTATAAATTACTGGTACATTGACTTTGAGTCTGCTTTAAATATATGTGGTTAAATTGCATGTTGTGATCCTAAACTTTCGTAGACCTGTTTATTTAATTTCTATACTTTTAAAAGATGCTAATAGATCCTCAAACTGTTTAATAAGTTTTTGCTAATAATTCATTTGGCAACAGCATGACATGCTAATTGTGTATTATTTAAGGATCATGCAATGGGTTGATTTAAAGCTTTGCTCTTGAATAATCCAATCAATATGCCGCGTAAGCGTTAAACTCACATGGGGTGGATTTAAAGCTTAGTTCTTAAATAATACTATCTATGTGTTAAATAAGTGTTAAACTAATAATGTTAACAGGAGGATCTTATTAGACAAAGTTGGAAATTCTAGTACTTACTAGATTTTTTTTTTTAATTTATTTTTATTTTTATTTTTTCAATAAAGGGACTAGATTAGATATAATTATCAAGATTTGGTGACGTATTAGAAACCTTTTGAAGTTAAAGAACTAAATAGCTGTAACAAGTTTTGGGACAAAAATTCTAGTTTAACCTTTTTTTTGCTTTTCTTTCCTTGCATATTGAATTGTTCTCGAGAAATTCTTATATAAATCACAATTTCTCCTTAAAAATCTGCAGTATAGCCGAATGCTTTGCATTTCTTGTCTGCACGAAGTGGTATAATCCTATGATTCATAGGCATTCTCTTGTTAGAGAATCCAGTTCCTCTTCGCTGACCATTAGATACCTCGACTGGGATAGAGGTGTGGTTGTTTCCTCTGATGAGGTTCAACCCCAAGTCAGAGTTTGTAACTTGCAGGAAGTTGGTGGACACATCATGAAGGTTCCTTTAATCATTTTCCAAATCATGCTTTTTATGCGCTTAGAGGTAAATTTTTAAAAAGATGAATTTTAAATGAAATTTTTCTATAGCTTCTGGGTTTCTCATTTCAAACATTTCAATTTCAGGGAACCCCTAGGAGTGCTTCCTATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTATTGCAAGGGGTGGGTTCAGTATTTGCGGCATATAGGTCAATGGAAAAAATTATAATTTTGCTAGTTGGTTCACCTACCTCTGTAAGATATCTTGATATAAGGTCGAAGGCTCGTGAACTGTTAGGGTTCATGCACCATGGATCGAGGTAAATTCTTGAATTTTTGTCTATTTCTTTAGTTGATTCCCAGTTATGCAACTTGAATTGAATGTAGAATTTACAGGATAATTAGATATTATCCTTTGGTTTATATCAATTTCTTCCTTATTTGTAGGTTACTGGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAAATTCTGGGTTTGTTTTCGACCTTACTTAACTTCAATCTGATTCTAGGTTTTATCTGATGCCCATGTACACTTCAATATATAATGCTAAGATCAACTCTGGGGAATCATATGGGGCTTCAAGTTATTAAGTTCTCTAAATAGGATCTTGAACCTGGACCTTGGAGAGTATCTCCAACGTATCCAGACCCTTACCATTAGGACGCCCTTCGAATTCGTTGTTGAACCCTTTAAGAATCGCTGTTATACATGTATACTACTTTAATTCAAGATTCTTGTATTTTATTTTATCGATATCATACTTTTTGAGCACGCTACTTACACGTTGTTTGATCTGGCTCAAATCTAGTAGATTGGGAAATGAAGATTTTGAATGAAGAAATGGTTTAAACTATATTCTCGATTGACATTTGTTGTAGCTTGAAATGGAAAGAAGTTGATGAACTTTCTTTGCTTGATACTGTAAAGTAGTGATATTTCTTTGTTCTGTTTTTTCTCCTAATGGTTTGGTATTTCATAGTTTTATCATGTACTTAACAATCCAGGGAAGCCCATATTGACTTTTCCTTGTGATTATAAATTATTTTTTTGTTGGTGATGGAAGAACTTATAAAGACTTACGAACTTGTAGCTATGTCTAGTGTTCTTCCTTCTCGTTGATACAAAGATATATTGTCTTCATTATTTTTTCTTTCTTATTCTTGTCCTTAATGCTATTATTCAGGTATGATACTTTCACACCAGAGACTGTAAAGAAAAGGACCAAATCCAATCTAGTTGATGAGGTAAAGAGAATACTATGTCTACTTCTGGTTGCCACATATTCACATCCCCCATTTGTGTGCTTTGTTTTGAGGTCATATGAGTACGTAATTTTCAGGACCAACTTATACACTATGTCTACCTCTGTATTTCTTCCAACAATTACGTACTCATAATTTTCAATTTAAATTCTGGTTCCTATCTTGTACTTTAAGTGTTTTCCCTGTAGTGGACTTCTTTATTTTCTTTTCTCGTTACAGATATGGAGATTACAAGCTGCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGCCAGGAGCACGAAAAGCTTCTATATGTAACCTTTTCTGACTCAACTATTTTACTTTTTGAATACTCAGCTATGTTTAACCTATGAGAGAAAGAGAAGCTGTTTTTTCATGTATGGAAAACTATAAATGTTTCTGGTGGCTGTATTTGAGAATCATTTCTTTAAATTTGGGTCATTACAGGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCGTGTAGGCATCACATTCTTTGCAGGTAATATTCACCTTCCCCTTTGTTCATCTTCTGCTTGCTTTAACTCTGACAGTCAATTTGACTGTGTTGGTCACAAATGGGATTTCAGCTCTTGTAGTGAGAAGTGTAATCGTTGCCCAATCTGTCGGGAATCGATCGAAGAACGGCTGCCTGTAAATGATGTTTAGTGAGAAAGCCCCATATTGGTCGGGCTGGCTCAAAGCGCTGGATTGTTGCTTGTGTTTTTTTAGATGGGACAGGCATCAACAGTGTCTAACAACATATGGTGTGTATACAAAATTTCTACACGGACCAGTTTGAAAGTTCACTGAGTGTTGAGTTCCTTGCTTTGGACTGTAATTGAGTGAGAGATTATGTTTTCAGCAAATATTATGGTATCCATAGTTCACTCAAACTTGTAAATTCGTCAAACTCATGTAACCTTGTGACCAACCCAATTCAACTTTGTAGTGTTGGAATCATTTATAAGTTATGTATAGAAAGTGATGATACTTCAGAGATCCATTTCACTTATTGTATCAAAAGGAGTTGTTTGATGTCATATATTATCATATCAGAAGGCGATATTA

mRNA sequence

ACATTTAATTAAACGTCTTTTTCCTCCTTTCGCGTAAAAGCAAAGTGTTGAAATGAAACCGCTGGCGCTCGGGAATATTTGTTAACCCCACCTTCCACTGCCCCATTTCAATTTTTTTCTCAATTTCAGCGTTGAGGCCGAACTTTCTTAGAAAGAGAGGTGGAGGGGGTTGAGGAGAGGACTCCAGTTCTCTCTCTTTTGCTTAATCTTTTCTGAACAGACCAAATTCTTCTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGTATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTTTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGGGTTGTCTTTTCACCCCTATGGCTTTTTCATTTAGTTGCAGCAAGAGGCAGATTTTCTCTACCTGCTCCATCAATGCCTCATGACCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCTTTCGAAGTACTTCTTTGTATATATTTAGAGTGCAGTAATGTTATAGATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGATAGCAATTTTGGTCGACAATATCAGGATGTGTAGAGCCTTACTGCCTGGAGATGAAGAAGACAACGTAAGCGATGAAGTTATATGGGAAACGCTTCCTCACTTCTGGGTCTCAATCTCCATGGTTTTCTTCATCGCTGCAACCCTTTTCACTCTTCTTAAGCTTAGTGCCGAATGCTTTGCATTTCTTGTCTGCACGAAGTGGTATAATCCTATGATTCATAGGCATTCTCTTGTTAGAGAATCCAGTTCCTCTTCGCTGACCATTAGATACCTCGACTGGGATAGAGGTGTGGTTGTTTCCTCTGATGAGGTTCAACCCCAAGTCAGAGTTTGTAACTTGCAGGAAGTTGGTGGACACATCATGAAGGTTCCTTTAATCATTTTCCAAATCATGCTTTTTATGCGCTTAGAGGGAACCCCTAGGAGTGCTTCCTATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTATTGCAAGGGGTGGGTTCAGTATTTGCGGCATATAGGTCAATGGAAAAAATTATAATTTTGCTAGTTGGTTCACCTACCTCTGTAAGATATCTTGATATAAGGTCGAAGGCTCGTGAACTGTTAGGGTTCATGCACCATGGATCGAGGTTACTGGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAAATTCTGGGTATGATACTTTCACACCAGAGACTGTAAAGAAAAGGACCAAATCCAATCTAGTTGATGAGATATGGAGATTACAAGCTGCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGCCAGGAGCACGAAAAGCTTCTATATGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCGTGTAGGCATCACATTCTTTGCAGCTCTTGTAGTGAGAAGTGTAATCGTTGCCCAATCTGTCGGGAATCGATCGAAGAACGGCTGCCTGTAAATGATGTTTAGTGAGAAAGCCCCATATTGGTCGGGCTGGCTCAAAGCGCTGGATTGTTGCTTGTGTTTTTTTAGATGGGACAGGCATCAACAGTGTCTAACAACATATGGTGTGTATACAAAATTTCTACACGGACCAGTTTGAAAGTTCACTGAGTGTTGAGTTCCTTGCTTTGGACTGTAATTGAGTGAGAGATTATGTTTTCAGCAAATATTATGGTATCCATAGTTCACTCAAACTTGTAAATTCGTCAAACTCATGTAACCTTGTGACCAACCCAATTCAACTTTGTAGTGTTGGAATCATTTATAAGTTATGTATAGAAAGTGATGATACTTCAGAGATCCATTTCACTTATTGTATCAAAAGGAGTTGTTTGATGTCATATATTATCATATCAGAAGGCGATATTA

Coding sequence (CDS)

ATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTTTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGGGTTGTCTTTTCACCCCTATGGCTTTTTCATTTAGTTGCAGCAAGAGGCAGATTTTCTCTACCTGCTCCATCAATGCCTCATGACCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCTTTCGAAGTACTTCTTTGTATATATTTAGAGTGCAGTAATGTTATAGATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGATAGCAATTTTGGTCGACAATATCAGGATGTGTAGAGCCTTACTGCCTGGAGATGAAGAAGACAACGTAAGCGATGAAGTTATATGGGAAACGCTTCCTCACTTCTGGGTCTCAATCTCCATGGTTTTCTTCATCGCTGCAACCCTTTTCACTCTTCTTAAGCTTAGTGCCGAATGCTTTGCATTTCTTGTCTGCACGAAGTGGTATAATCCTATGATTCATAGGCATTCTCTTGTTAGAGAATCCAGTTCCTCTTCGCTGACCATTAGATACCTCGACTGGGATAGAGGTGTGGTTGTTTCCTCTGATGAGGTTCAACCCCAAGTCAGAGTTTGTAACTTGCAGGAAGTTGGTGGACACATCATGAAGGTTCCTTTAATCATTTTCCAAATCATGCTTTTTATGCGCTTAGAGGGAACCCCTAGGAGTGCTTCCTATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTATTGCAAGGGGTGGGTTCAGTATTTGCGGCATATAGGTCAATGGAAAAAATTATAATTTTGCTAGTTGGTTCACCTACCTCTGTAAGATATCTTGATATAAGGTCGAAGGCTCGTGAACTGTTAGGGTTCATGCACCATGGATCGAGGTTACTGGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAAATTCTGGGTATGATACTTTCACACCAGAGACTGTAAAGAAAAGGACCAAATCCAATCTAGTTGATGAGATATGGAGATTACAAGCTGCATTAAATCAGCAGACAGAAGTTACGAAATTGAGCCGCCAGGAGCACGAAAAGCTTCTATATGAGAAGATTCTTTGTAGAGTATGCTTTGATGAACCCATTGATATGGTTCTTCTTCCGTGTAGGCATCACATTCTTTGCAGCTCTTGTAGTGAGAAGTGTAATCGTTGCCCAATCTGTCGGGAATCGATCGAAGAACGGCTGCCTGTAAATGATGTTTAG

Protein sequence

MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEIAILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLSAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVGSVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQAKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV

Homology

[Close]

BLAST of Cp4.1LG01g17670 vs. Swiss-Prot
Match: KN7M_ARATH (Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana GN=KIN7M PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 2.3e-09
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 1


Query: 402  LCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERL 446
            +C+VCF+ P   +LLPCRH  LC SCS  C+ CPICR  I +RL
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCKSCSLACSECPICRTKISDRL 1053

[Close]

BLAST of Cp4.1LG01g17670 vs. Swiss-Prot
Match: KN7D_ARATH (Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana GN=KIN7D PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.1e-09
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 1


Query: 374  RLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNR 433
            RL+A + +  E    S+   +   +   +C+VCF+ P   +LLPCRH  LC SCS  C+ 
Sbjct: 982  RLKARMQEMKEKEMKSQANGDANSH---ICKVCFESPTAAILLPCRHFCLCKSCSLACSE 1041

Query: 434  CPICRESIEERL 446
            CPICR  I +RL
Sbjct: 1042 CPICRTKISDRL 1050

[Close]

BLAST of Cp4.1LG01g17670 vs. Swiss-Prot
Match: RNGB_DICDI (RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 1


Query: 378 ALNQQTEVTKLSRQEHEK-LLYEKILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPI 437
           ++  Q  + +L   E EK  L ++  C +C   P ++VLLPCRH  LCS C  K  +CPI
Sbjct: 871 SIKDQRYLNRLVSLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPI 930

Query: 438 CRESIEERLPV 448
           CR  IE ++ +
Sbjct: 931 CRSHIENKISI 941

[Close]

BLAST of Cp4.1LG01g17670 vs. Swiss-Prot
Match: RFFL_HUMAN (E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-07
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 1


Query: 399 EKILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESI 442
           E+ LC++C D PID VLL C H + C+ C ++ N CPICR+ +
Sbjct: 312 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYV 354

[Close]

BLAST of Cp4.1LG01g17670 vs. Swiss-Prot
Match: RFFL_MOUSE (E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-07
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 1


Query: 399 EKILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESI 442
           E+ LC++C D PID VLL C H + C+ C ++ N CPICR+ +
Sbjct: 326 EENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYV 368

[Close]

BLAST of Cp4.1LG01g17670 vs. TrEMBL
Match: A0A0D2REQ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 1.7e-184
Identity = 329/468 (70.30%), Postives = 382/468 (81.62%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           +V   RV+TWRRV KSLQAL AH  L SFTL LALKL H +SYSWWVVFSPLWLFH   A
Sbjct: 2   LVERRRVMTWRRVGKSLQALVAHALLFSFTLLLALKLHHALSYSWWVVFSPLWLFHATVA 61

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR WAP+HA+++TPLLVAFE+LLCI L+ S V++LKIVF+PL+ FE+
Sbjct: 62  RGRFSLPAPSMPHDRDWAPFHALISTPLLVAFELLLCIRLDSSYVVNLKIVFLPLLAFEM 121

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AIL+DNIRMCRAL+PGDEE ++SDEVIWETLPHFWV+ISMVFFIAAT FTLLKL      
Sbjct: 122 AILIDNIRMCRALMPGDEE-SMSDEVIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAA 181

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE 240
                       AECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE
Sbjct: 182 LGWWDLFINFGIAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDE 241

Query: 241 -VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVG 300
                 R+CNLQ++GGH+MK+P   FQIMLFM+LEGTP SA  I   +LFSPL LLQG G
Sbjct: 242 DSHHNSRICNLQDIGGHVMKIPFFCFQIMLFMQLEGTPPSARNISTPILFSPLLLLQGAG 301

Query: 301 SVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQA 360
              AAYR +EKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQA
Sbjct: 302 VAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQA 361

Query: 361 KLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKIL 420
           +LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKIL
Sbjct: 362 RLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKIL 421

Query: 421 CRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           CRVCF+E I +VLLPCRHH+LCS+C EKC RCPICR SIEERLPV DV
Sbjct: 422 CRVCFEEQICVVLLPCRHHVLCSTCCEKCKRCPICRVSIEERLPVYDV 468

[Close]

BLAST of Cp4.1LG01g17670 vs. TrEMBL
Match: A0A0D2RL54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 2.2e-184
Identity = 329/469 (70.15%), Postives = 382/469 (81.45%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           +V   RV+TWRRV KSLQAL AH  L SFTL LALKL H +SYSWWVVFSPLWLFH   A
Sbjct: 2   LVERRRVMTWRRVGKSLQALVAHALLFSFTLLLALKLHHALSYSWWVVFSPLWLFHATVA 61

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR WAP+HA+++TPLLVAFE+LLCI L+ S V++LKIVF+PL+ FE+
Sbjct: 62  RGRFSLPAPSMPHDRDWAPFHALISTPLLVAFELLLCIRLDSSYVVNLKIVFLPLLAFEM 121

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLSA---- 180
           AIL+DNIRMCRAL+PGDEE ++SDEVIWETLPHFWV+ISMVFFIAAT FTLLKL A    
Sbjct: 122 AILIDNIRMCRALMPGDEE-SMSDEVIWETLPHFWVAISMVFFIAATTFTLLKLCAGDVA 181

Query: 181 --------------ECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSD 240
                         ECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSD
Sbjct: 182 ALGWWDLFINFGIAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSD 241

Query: 241 E-VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGV 300
           E      R+CNLQ++GGH+MK+P   FQIMLFM+LEGTP SA  I   +LFSPL LLQG 
Sbjct: 242 EDSHHNSRICNLQDIGGHVMKIPFFCFQIMLFMQLEGTPPSARNISTPILFSPLLLLQGA 301

Query: 301 GSVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 360
           G   AAYR +EKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 302 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 361

Query: 361 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 420
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 362 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 421

Query: 421 LCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           LCRVCF+E I +VLLPCRHH+LCS+C EKC RCPICR SIEERLPV DV
Sbjct: 422 LCRVCFEEQICVVLLPCRHHVLCSTCCEKCKRCPICRVSIEERLPVYDV 469

[Close]

BLAST of Cp4.1LG01g17670 vs. TrEMBL
Match: D7T9A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02950 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.1e-180
Identity = 316/466 (67.81%), Postives = 378/466 (81.12%), Query Frame = 1


Query: 8   LTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAARGRFSLP 67
           ++WRRV  SLQA AAHG LL+FTL L LKLDH VSYSWW++F+PLWLFH V ARGRFSLP
Sbjct: 1   MSWRRVATSLQAPAAHGLLLTFTLLLVLKLDHAVSYSWWIIFAPLWLFHAVVARGRFSLP 60

Query: 68  APSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLE------CSNVIDLKIVFVPLMIFEIA 127
           APSMPHDR+WAP+HAV ATPLLVAFE+LLCIYL+      C   ++LKIVF+PL+  E A
Sbjct: 61  APSMPHDRHWAPFHAVTATPLLVAFELLLCIYLQHSYVIKCIAAVNLKIVFLPLLALEAA 120

Query: 128 ILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS------ 187
           IL+DNIRMC+AL+PGD+E ++SDE IWETLPHFWV+ISMVFFIAAT FTLLKL       
Sbjct: 121 ILIDNIRMCKALMPGDDE-SISDEAIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAAL 180

Query: 188 -----------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEV 247
                      AECFA +VCT+WYNP IHR+S +R++ SSS+ IRYLDW+ G+VVSSDE 
Sbjct: 181 GWWDLFINFGIAECFASIVCTRWYNPAIHRNSHIRQTGSSSMIIRYLDWNSGLVVSSDED 240

Query: 248 QPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVGSV 307
           Q Q R+C+LQ++GGHIMK+PL+ FQI+LFMRLEGTP SA +IP  +LF+PLFLLQG+G +
Sbjct: 241 QHQSRLCDLQDIGGHIMKIPLVGFQILLFMRLEGTPSSARHIPIPLLFAPLFLLQGIGVL 300

Query: 308 FAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQAKL 367
           FA YR +EKI++LL  +  + RY  I SK R   GF+HHGSRLLGWWSIDEGS+EEQA+L
Sbjct: 301 FALYRLVEKIVLLLHSAAGTERYFAISSKVRSYFGFLHHGSRLLGWWSIDEGSREEQARL 360

Query: 368 YSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCR 427
           Y AG SGY+TF+P+TVKK  KS+L +EIWRLQAAL +QTE+TK S+QE E+L  EKILCR
Sbjct: 361 YYAGASGYNTFSPDTVKKLPKSDLAEEIWRLQAALGEQTEITKFSQQEFERLQNEKILCR 420

Query: 428 VCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           VCFDE I+MVLLPCRHH+LCS+C EKC RCPICR  IEERLPV DV
Sbjct: 421 VCFDEQINMVLLPCRHHVLCSTCCEKCKRCPICRVFIEERLPVYDV 465

[Close]

BLAST of Cp4.1LG01g17670 vs. TrEMBL
Match: A0A061EIQ6_THECC (Transmembrane Fragile-X-F-associated protein OS=Theobroma cacao GN=TCM_011872 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 7.2e-180
Identity = 324/468 (69.23%), Postives = 379/468 (80.98%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           +V   RV++WRRV KSLQAL AH  L SFTL LALKL H VS SWWVVF+PLWLFH V A
Sbjct: 2   LVERRRVMSWRRVGKSLQALVAHALLFSFTLLLALKLHHAVSRSWWVVFAPLWLFHAVVA 61

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR+WAP+HAV+A PLLVAFE+LLCI L+ S V++LKIVF+PL+ FEI
Sbjct: 62  RGRFSLPAPSMPHDRHWAPFHAVIAMPLLVAFELLLCIRLDNSYVVNLKIVFLPLLAFEI 121

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AIL+DNIRMCRAL+PGDEE ++SDEVIWETLPHFWV+ISMVFFIAAT FTLLKL      
Sbjct: 122 AILIDNIRMCRALMPGDEE-SMSDEVIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAA 181

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE 240
                       AECFAFLVCTKWYNP IHR+S + ES+ SS+TIRYLDW+RG VVSSDE
Sbjct: 182 LGWWDLFINFGIAECFAFLVCTKWYNPAIHRNSHLGESTPSSMTIRYLDWNRGFVVSSDE 241

Query: 241 VQPQ-VRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVG 300
            + Q  R+CNLQ++GGH+MK+P I FQIMLFM LEGTP SA  I   VLFSPL LLQG  
Sbjct: 242 DRHQNSRMCNLQDIGGHVMKIPFIGFQIMLFMHLEGTPPSARNISPPVLFSPLLLLQGAA 301

Query: 301 SVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQA 360
            + AAYR +EKI+IL+ G   S RY D+ SK  E  GF+HHGSRLLGWWSIDEGS+EEQA
Sbjct: 302 VILAAYRLIEKIVILVHGGAGSGRYFDVSSKVLEFFGFLHHGSRLLGWWSIDEGSREEQA 361

Query: 361 KLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKIL 420
           +LY +  SGY+TF+P+ VKK  KS+LV+EIWRL+AAL++QTE+TK S+QE E+L  EKIL
Sbjct: 362 RLYCSEASGYNTFSPDVVKKMPKSDLVEEIWRLRAALSEQTEITKFSQQEFERLQNEKIL 421

Query: 421 CRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           CRVCF+E I++VLLPCRHH+LCS+C E+C RCPICR SIEERLPV DV
Sbjct: 422 CRVCFEEQINVVLLPCRHHVLCSTCCERCKRCPICRVSIEERLPVYDV 468

[Close]

BLAST of Cp4.1LG01g17670 vs. TrEMBL
Match: V4KM49_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10018496mg PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 6.1e-179
Identity = 312/469 (66.52%), Postives = 378/469 (80.60%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           M+V+ RV++WRRV+KS QA++AHG L SFTL LALKLDH+VS+SWW +F+PLW FH V A
Sbjct: 1   MLVQRRVMSWRRVWKSFQAVSAHGLLFSFTLLLALKLDHVVSHSWWFIFTPLWFFHAVIA 60

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR+WAP+H+VMATPLLVAFE+LLC++LE   V+DLKIVF+PL+ FE+
Sbjct: 61  RGRFSLPAPSMPHDRHWAPFHSVMATPLLVAFEILLCVHLEDKYVVDLKIVFLPLLAFEV 120

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AILVDN+RMCR L+PGDEE  +SDE IWETLPHFWVSISMVFFIAAT FTLLKL      
Sbjct: 121 AILVDNVRMCRTLMPGDEE-TMSDEAIWETLPHFWVSISMVFFIAATTFTLLKLCGDVAA 180

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE 240
                       AECFAFLVCTKW N  IHR++ + E SSSS+ +RYLDW+RG+VV++DE
Sbjct: 181 LGWWDLFINFGIAECFAFLVCTKWSNQSIHRYTHIPEPSSSSMVVRYLDWNRGLVVTADE 240

Query: 241 VQPQV-RVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVG 300
              Q  R+C LQ++GGH+MK+P I FQI+LFMRLEGTP SA  IP LVLF PLFLLQG G
Sbjct: 241 EHQQSNRICGLQDIGGHVMKIPFITFQIILFMRLEGTPASAKNIPILVLFVPLFLLQGAG 300

Query: 301 SVFAAYRSMEKIIILLV-GSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 360
            +FA YR +EK  +L+  G  +  RY    S ARE LGF  HG+RLLGWWSIDEGS+EEQ
Sbjct: 301 VIFATYRLVEKSFLLITSGGGSYGRYFTATSSAREFLGFFQHGARLLGWWSIDEGSREEQ 360

Query: 361 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 420
           A+LYS   +GY+TF+PE VKK  KS+LV+EIWRLQAAL++QT++T  S+QE+EKL  EKI
Sbjct: 361 ARLYSGEATGYNTFSPEVVKKMPKSDLVEEIWRLQAALSEQTDITNYSQQEYEKLQNEKI 420

Query: 421 LCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           LCRVCF++PI++VLLPCRHH+LCS+C EKC +CPICR  IEER+PV DV
Sbjct: 421 LCRVCFEDPINVVLLPCRHHVLCSTCCEKCKKCPICRVLIEERMPVYDV 468

[Close]

BLAST of Cp4.1LG01g17670 vs. TAIR10
Match: AT1G68820.1 (AT1G68820.1 Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 632.1 bits (1629), Expect = 2.6e-181
Identity = 312/469 (66.52%), Postives = 379/469 (80.81%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           M+V+ RV++WRRV+KS QA +AH  L SFTL LALKLDH+VS+SWW VF+PLWLFH V A
Sbjct: 1   MLVQRRVMSWRRVWKSFQAASAHCLLFSFTLLLALKLDHVVSHSWWFVFAPLWLFHAVIA 60

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR+WAP+H+VMATPLLVAFE+LLC++LE   V+DLKIVF+PL+ FE+
Sbjct: 61  RGRFSLPAPSMPHDRHWAPFHSVMATPLLVAFEILLCVHLEDKYVVDLKIVFLPLLAFEV 120

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AIL+DN+RMCR L+PGDEE  +SDE IWETLPHFWVSISMVFFIAAT FTLLKL      
Sbjct: 121 AILIDNVRMCRTLMPGDEE-TMSDEAIWETLPHFWVSISMVFFIAATTFTLLKLCGDVAA 180

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSS-D 240
                       AECFAFLVCTKW N  IHR+S + E SSSS+ +RYLDW+RG+VV++ D
Sbjct: 181 LGWWDLFINFGIAECFAFLVCTKWSNQSIHRYSHIPEPSSSSMVVRYLDWNRGLVVTADD 240

Query: 241 EVQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVG 300
           E Q   R+C LQ++GGH+MK+P + FQI+LFMRLEGTP SA  IP LVLF PLFLLQG G
Sbjct: 241 EHQQSNRICGLQDIGGHVMKIPFVTFQIILFMRLEGTPASAKNIPILVLFVPLFLLQGAG 300

Query: 301 SVFAAYRSMEKIIILL-VGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 360
            +FA YR +EK ++L+  GS +  RY    S ARE LGF  HG+RLLGWWSIDEGS+EEQ
Sbjct: 301 VLFAMYRLVEKSVLLINSGSGSYGRYFTATSSAREFLGFFQHGARLLGWWSIDEGSREEQ 360

Query: 361 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 420
           A+LYS   +GY+TF+PE VKK  KS+LV+EIWRLQAAL++QT++T  S+QE+E+L  EKI
Sbjct: 361 ARLYSGEATGYNTFSPEVVKKMPKSDLVEEIWRLQAALSEQTDITSYSQQEYERLQNEKI 420

Query: 421 LCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           LCRVCF++PI++VLLPCRHH+LCS+C EKC +CPICR  IEER+PV DV
Sbjct: 421 LCRVCFEDPINVVLLPCRHHVLCSTCCEKCKKCPICRVLIEERMPVYDV 468

[Close]

BLAST of Cp4.1LG01g17670 vs. TAIR10
Match: AT1G73950.1 (AT1G73950.1 Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-160
Identity = 283/464 (60.99%), Postives = 349/464 (75.22%), Query Frame = 1


Query: 12  RVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAARGRFSLPAPSM 71
           RV KS+QA  AH FL SFTL L LKLDH ++YSWWVV  PLW FH V ARGRFSLPAP  
Sbjct: 5   RVLKSVQASVAHCFLFSFTLALVLKLDHSITYSWWVVCLPLWAFHAVVARGRFSLPAPIA 64

Query: 72  PHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNV-----IDLKIVFVPLMIFEIAILVDN 131
           P +R+WAP HA+++TPLL+AFE+LLC+YLE +       + LKIVF+PL+ FE+ ILVDN
Sbjct: 65  PRNRHWAPCHAIVSTPLLIAFELLLCVYLETAYADSPPAVSLKIVFLPLLAFEVIILVDN 124

Query: 132 IRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----------- 191
            RMCRAL+PGDEE +V+DE +WE LPHFWV+ISMVFF+AAT+FTLLKLS           
Sbjct: 125 ARMCRALMPGDEE-SVNDEAVWEALPHFWVAISMVFFLAATVFTLLKLSGDVAALGWWDL 184

Query: 192 ------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQPQVR 251
                 AECFAFLVCTKW NP+IHR S  RE+ SSS  IRYLDW+ G+ V S++ + Q  
Sbjct: 185 FINFGIAECFAFLVCTKWSNPVIHRSSRDRETGSSSTNIRYLDWNSGLGVFSEDDRNQ-D 244

Query: 252 VCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVGSVFAAYR 311
            C LQ++GGHIMK+PLI+FQ++L M LEGTP +A  I   VLFSPLFLLQGVG +FAA +
Sbjct: 245 TCGLQDIGGHIMKIPLIVFQVVLCMHLEGTPEAAKSISVPVLFSPLFLLQGVGVLFAASK 304

Query: 312 SMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQAKLYSAGN 371
            +EK+++LL G   +  Y    S+A + LGF+HHGSRLLGWWSIDEGS+EE+A+LY    
Sbjct: 305 LIEKVVLLLRGEDDTGLYFRFLSRAHDCLGFLHHGSRLLGWWSIDEGSREEEARLYFDQE 364

Query: 372 SGYDTF---TPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILCRVC 431
           SGY+TF    PE VKK  K  L +E+WRLQAAL +QTE+TK S+QE+E+L  EK+LCRVC
Sbjct: 365 SGYNTFCGHPPEIVKKMPKKELAEEVWRLQAALGEQTEITKFSQQEYERLQNEKVLCRVC 424

Query: 432 FDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           F+  I +VLLPCRH +LC +CS+KC +CP CR +IEERLPV DV
Sbjct: 425 FEREISVVLLPCRHRVLCRNCSDKCKKCPFCRITIEERLPVYDV 466

[Close]

BLAST of Cp4.1LG01g17670 vs. TAIR10
Match: AT1G18470.1 (AT1G18470.1 Transmembrane Fragile-X-F-associated protein)

HSP 1 Score: 561.6 bits (1446), Expect = 4.3e-160
Identity = 284/468 (60.68%), Postives = 351/468 (75.00%), Query Frame = 1


Query: 8   LTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAARGRFSLP 67
           ++ RRV KS+QALAAH  L  FTL L LKLDH VS SWW+VF PLW FH V ARGRFSLP
Sbjct: 1   MSCRRVLKSIQALAAHSLLFCFTLLLVLKLDHTVSSSWWMVFFPLWAFHAVVARGRFSLP 60

Query: 68  APSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNV-----IDLKIVFVPLMIFEIAI 127
           AP  P +R+WAP HAV+ATPLLVAFE+LLCIYLE S       + LKI F+PL+ FE+ I
Sbjct: 61  APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYARWPPAVSLKIAFLPLLAFELTI 120

Query: 128 LVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS------- 187
           LVDN+RMCRAL+PGD+ D+++D+ IWE LPHFWV+ISMVF +AAT FTLLKLS       
Sbjct: 121 LVDNLRMCRALMPGDD-DSITDDAIWEALPHFWVAISMVFTLAATFFTLLKLSGDVVALG 180

Query: 188 ----------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEVQ 247
                     AECFAFLVCTKW NP+IHR S  RE+ SSS +IRYLDW+ G+VV+ +E +
Sbjct: 181 WWDLFINFGIAECFAFLVCTKWSNPVIHRSSRARETGSSSTSIRYLDWNSGLVVAPEEDR 240

Query: 248 PQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVGSVF 307
            Q R C LQ++GGH++K+P+I+FQ++L M LEGTP  A  I   VLFSPLFLLQG+G +F
Sbjct: 241 HQDRWCGLQDIGGHMLKIPVILFQVVLCMYLEGTPERAKDISIPVLFSPLFLLQGLGVLF 300

Query: 308 AAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQAKLY 367
           AA + +EKI++LL G      Y    S A + LGF+HHGSRLLGWWSIDEGS+EEQA+LY
Sbjct: 301 AASKLLEKIVLLLRGEAGPGLYFRFSSSAHDCLGFLHHGSRLLGWWSIDEGSREEQARLY 360

Query: 368 SAGNSGYDTFT---PETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKIL 427
               SGY+TF+   PE VKK  K +L +E+WRLQAAL +QTE+TK S+QE+E+L  EK+L
Sbjct: 361 FDQESGYNTFSGHPPEIVKKMPKEDLAEEVWRLQAALGEQTEITKFSQQEYERLQNEKVL 420

Query: 428 CRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           CRVCF++ I +VLLPCRH +LC +C++KC  CPICR  IE+RL V DV
Sbjct: 421 CRVCFEKDISLVLLPCRHRVLCRTCADKCTTCPICRIDIEKRLSVYDV 467

[Close]

BLAST of Cp4.1LG01g17670 vs. TAIR10
Match: AT2G21380.1 (AT2G21380.1 Kinesin motor family protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 1


Query: 402  LCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERL 446
            +C+VCF+ P   +LLPCRH  LC SCS  C+ CPICR  I +RL
Sbjct: 1010 ICKVCFESPTATILLPCRHFCLCKSCSLACSECPICRTKISDRL 1053

[Close]

BLAST of Cp4.1LG01g17670 vs. TAIR10
Match: AT4G39050.1 (AT4G39050.1 Kinesin motor family protein)

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-10
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 1


Query: 374  RLQAALNQQTEVTKLSRQEHEKLLYEKILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNR 433
            RL+A + +  E    S+   +   +   +C+VCF+ P   +LLPCRH  LC SCS  C+ 
Sbjct: 982  RLKARMQEMKEKEMKSQANGDANSH---ICKVCFESPTAAILLPCRHFCLCKSCSLACSE 1041

Query: 434  CPICRESIEERL 446
            CPICR  I +RL
Sbjct: 1042 CPICRTKISDRL 1050

[Close]

BLAST of Cp4.1LG01g17670 vs. NCBI nr
Match: gi|823157485|ref|XP_012478627.1| (PREDICTED: uncharacterized protein LOC105794150 isoform X2 [Gossypium raimondii])

HSP 1 Score: 653.7 bits (1685), Expect = 2.4e-184
Identity = 329/468 (70.30%), Postives = 382/468 (81.62%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           +V   RV+TWRRV KSLQAL AH  L SFTL LALKL H +SYSWWVVFSPLWLFH   A
Sbjct: 2   LVERRRVMTWRRVGKSLQALVAHALLFSFTLLLALKLHHALSYSWWVVFSPLWLFHATVA 61

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR WAP+HA+++TPLLVAFE+LLCI L+ S V++LKIVF+PL+ FE+
Sbjct: 62  RGRFSLPAPSMPHDRDWAPFHALISTPLLVAFELLLCIRLDSSYVVNLKIVFLPLLAFEM 121

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AIL+DNIRMCRAL+PGDEE ++SDEVIWETLPHFWV+ISMVFFIAAT FTLLKL      
Sbjct: 122 AILIDNIRMCRALMPGDEE-SMSDEVIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAA 181

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE 240
                       AECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSDE
Sbjct: 182 LGWWDLFINFGIAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSDE 241

Query: 241 -VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVG 300
                 R+CNLQ++GGH+MK+P   FQIMLFM+LEGTP SA  I   +LFSPL LLQG G
Sbjct: 242 DSHHNSRICNLQDIGGHVMKIPFFCFQIMLFMQLEGTPPSARNISTPILFSPLLLLQGAG 301

Query: 301 SVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQA 360
              AAYR +EKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQA
Sbjct: 302 VAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQA 361

Query: 361 KLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKIL 420
           +LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKIL
Sbjct: 362 RLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKIL 421

Query: 421 CRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           CRVCF+E I +VLLPCRHH+LCS+C EKC RCPICR SIEERLPV DV
Sbjct: 422 CRVCFEEQICVVLLPCRHHVLCSTCCEKCKRCPICRVSIEERLPVYDV 468

[Close]

BLAST of Cp4.1LG01g17670 vs. NCBI nr
Match: gi|763763077|gb|KJB30331.1| (hypothetical protein B456_005G137800 [Gossypium raimondii])

HSP 1 Score: 653.3 bits (1684), Expect = 3.1e-184
Identity = 329/469 (70.15%), Postives = 382/469 (81.45%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           +V   RV+TWRRV KSLQAL AH  L SFTL LALKL H +SYSWWVVFSPLWLFH   A
Sbjct: 2   LVERRRVMTWRRVGKSLQALVAHALLFSFTLLLALKLHHALSYSWWVVFSPLWLFHATVA 61

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR WAP+HA+++TPLLVAFE+LLCI L+ S V++LKIVF+PL+ FE+
Sbjct: 62  RGRFSLPAPSMPHDRDWAPFHALISTPLLVAFELLLCIRLDSSYVVNLKIVFLPLLAFEM 121

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLSA---- 180
           AIL+DNIRMCRAL+PGDEE ++SDEVIWETLPHFWV+ISMVFFIAAT FTLLKL A    
Sbjct: 122 AILIDNIRMCRALMPGDEE-SMSDEVIWETLPHFWVAISMVFFIAATTFTLLKLCAGDVA 181

Query: 181 --------------ECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSD 240
                         ECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+SSD
Sbjct: 182 ALGWWDLFINFGIAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVISSD 241

Query: 241 E-VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGV 300
           E      R+CNLQ++GGH+MK+P   FQIMLFM+LEGTP SA  I   +LFSPL LLQG 
Sbjct: 242 EDSHHNSRICNLQDIGGHVMKIPFFCFQIMLFMQLEGTPPSARNISTPILFSPLLLLQGA 301

Query: 301 GSVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQ 360
           G   AAYR +EKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+EEQ
Sbjct: 302 GVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKEEQ 361

Query: 361 AKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKI 420
           A+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YEKI
Sbjct: 362 ARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYEKI 421

Query: 421 LCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           LCRVCF+E I +VLLPCRHH+LCS+C EKC RCPICR SIEERLPV DV
Sbjct: 422 LCRVCFEEQICVVLLPCRHHVLCSTCCEKCKRCPICRVSIEERLPVYDV 469

[Close]

BLAST of Cp4.1LG01g17670 vs. NCBI nr
Match: gi|225423871|ref|XP_002281391.1| (PREDICTED: uncharacterized protein LOC100249082 isoform X1 [Vitis vinifera])

HSP 1 Score: 652.5 bits (1682), Expect = 5.3e-184
Identity = 320/467 (68.52%), Postives = 384/467 (82.23%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           M+V+ RV++WRRV  SLQA AAHG LL+FTL L LKLDH VSYSWW++F+PLWLFH V A
Sbjct: 1   MLVQRRVMSWRRVATSLQAPAAHGLLLTFTLLLVLKLDHAVSYSWWIIFAPLWLFHAVVA 60

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR+WAP+HAV ATPLLVAFE+LLCIYL+ S  ++LKIVF+PL+  E 
Sbjct: 61  RGRFSLPAPSMPHDRHWAPFHAVTATPLLVAFELLLCIYLQHSYAVNLKIVFLPLLALEA 120

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AIL+DNIRMC+AL+PGD+E ++SDE IWETLPHFWV+ISMVFFIAAT FTLLKL      
Sbjct: 121 AILIDNIRMCKALMPGDDE-SISDEAIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAA 180

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE 240
                       AECFA +VCT+WYNP IHR+S +R++ SSS+ IRYLDW+ G+VVSSDE
Sbjct: 181 LGWWDLFINFGIAECFASIVCTRWYNPAIHRNSHIRQTGSSSMIIRYLDWNSGLVVSSDE 240

Query: 241 VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVGS 300
            Q Q R+C+LQ++GGHIMK+PL+ FQI+LFMRLEGTP SA +IP  +LF+PLFLLQG+G 
Sbjct: 241 DQHQSRLCDLQDIGGHIMKIPLVGFQILLFMRLEGTPSSARHIPIPLLFAPLFLLQGIGV 300

Query: 301 VFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQAK 360
           +FA YR +EKI++LL  +  + RY  I SK R   GF+HHGSRLLGWWSIDEGS+EEQA+
Sbjct: 301 LFALYRLVEKIVLLLHSAAGTERYFAISSKVRSYFGFLHHGSRLLGWWSIDEGSREEQAR 360

Query: 361 LYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILC 420
           LY AG SGY+TF+P+TVKK  KS+L +EIWRLQAAL +QTE+TK S+QE E+L  EKILC
Sbjct: 361 LYYAGASGYNTFSPDTVKKLPKSDLAEEIWRLQAALGEQTEITKFSQQEFERLQNEKILC 420

Query: 421 RVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           RVCFDE I+MVLLPCRHH+LCS+C EKC RCPICR  IEERLPV DV
Sbjct: 421 RVCFDEQINMVLLPCRHHVLCSTCCEKCKRCPICRVFIEERLPVYDV 466

[Close]

BLAST of Cp4.1LG01g17670 vs. NCBI nr
Match: gi|823157483|ref|XP_012478626.1| (PREDICTED: uncharacterized protein LOC105794150 isoform X1 [Gossypium raimondii])

HSP 1 Score: 649.0 bits (1673), Expect = 5.9e-183
Identity = 329/471 (69.85%), Postives = 382/471 (81.10%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           +V   RV+TWRRV KSLQAL AH  L SFTL LALKL H +SYSWWVVFSPLWLFH   A
Sbjct: 2   LVERRRVMTWRRVGKSLQALVAHALLFSFTLLLALKLHHALSYSWWVVFSPLWLFHATVA 61

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECS---NVIDLKIVFVPLMI 120
           RGRFSLPAPSMPHDR WAP+HA+++TPLLVAFE+LLCI L+ S    V++LKIVF+PL+ 
Sbjct: 62  RGRFSLPAPSMPHDRDWAPFHALISTPLLVAFELLLCIRLDSSYGKKVVNLKIVFLPLLA 121

Query: 121 FEIAILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS-- 180
           FE+AIL+DNIRMCRAL+PGDEE ++SDEVIWETLPHFWV+ISMVFFIAAT FTLLKL   
Sbjct: 122 FEMAILIDNIRMCRALMPGDEE-SMSDEVIWETLPHFWVAISMVFFIAATTFTLLKLCGD 181

Query: 181 ---------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVS 240
                          AECFAFLVCTKWYNP IHR+S + ESSSSS+TIR+LDW+RG+V+S
Sbjct: 182 VAALGWWDLFINFGIAECFAFLVCTKWYNPAIHRNSHLGESSSSSMTIRHLDWNRGLVIS 241

Query: 241 SDE-VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQ 300
           SDE      R+CNLQ++GGH+MK+P   FQIMLFM+LEGTP SA  I   +LFSPL LLQ
Sbjct: 242 SDEDSHHNSRICNLQDIGGHVMKIPFFCFQIMLFMQLEGTPPSARNISTPILFSPLLLLQ 301

Query: 301 GVGSVFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQE 360
           G G   AAYR +EKI+ILL     S RY+DI SK RE  GF+HHGSRLLGWWSIDEGS+E
Sbjct: 302 GAGVAHAAYRLIEKIVILLHSGAVSGRYIDISSKVREFFGFLHHGSRLLGWWSIDEGSKE 361

Query: 361 EQAKLYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYE 420
           EQA+LY +G SGY+TF+P+ VKKR KS+LV+EIWRLQAAL++QTEVTK S+QE E+L YE
Sbjct: 362 EQARLYYSGASGYNTFSPDIVKKRPKSDLVEEIWRLQAALSEQTEVTKYSQQEFERLQYE 421

Query: 421 KILCRVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           KILCRVCF+E I +VLLPCRHH+LCS+C EKC RCPICR SIEERLPV DV
Sbjct: 422 KILCRVCFEEQICVVLLPCRHHVLCSTCCEKCKRCPICRVSIEERLPVYDV 471

[Close]

BLAST of Cp4.1LG01g17670 vs. NCBI nr
Match: gi|731370640|ref|XP_010647974.1| (PREDICTED: uncharacterized protein LOC100249082 isoform X2 [Vitis vinifera])

HSP 1 Score: 648.3 bits (1671), Expect = 1.0e-182
Identity = 319/467 (68.31%), Postives = 384/467 (82.23%), Query Frame = 1


Query: 1   MVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWWVVFSPLWLFHLVAA 60
           M+V+ RV++WRRV  SLQA AAHG LL+FTL L LKLDH VSYSWW++F+PLWLFH V A
Sbjct: 1   MLVQRRVMSWRRVATSLQAPAAHGLLLTFTLLLVLKLDHAVSYSWWIIFAPLWLFHAVVA 60

Query: 61  RGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVIDLKIVFVPLMIFEI 120
           RGRFSLPAPSMPHDR+WAP+HAV ATPLLVAFE+LLCIYL+  + ++LKIVF+PL+  E 
Sbjct: 61  RGRFSLPAPSMPHDRHWAPFHAVTATPLLVAFELLLCIYLQ--HTVNLKIVFLPLLALEA 120

Query: 121 AILVDNIRMCRALLPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLS----- 180
           AIL+DNIRMC+AL+PGD+E ++SDE IWETLPHFWV+ISMVFFIAAT FTLLKL      
Sbjct: 121 AILIDNIRMCKALMPGDDE-SISDEAIWETLPHFWVAISMVFFIAATTFTLLKLCGDVAA 180

Query: 181 ------------AECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDE 240
                       AECFA +VCT+WYNP IHR+S +R++ SSS+ IRYLDW+ G+VVSSDE
Sbjct: 181 LGWWDLFINFGIAECFASIVCTRWYNPAIHRNSHIRQTGSSSMIIRYLDWNSGLVVSSDE 240

Query: 241 VQPQVRVCNLQEVGGHIMKVPLIIFQIMLFMRLEGTPRSASYIPCLVLFSPLFLLQGVGS 300
            Q Q R+C+LQ++GGHIMK+PL+ FQI+LFMRLEGTP SA +IP  +LF+PLFLLQG+G 
Sbjct: 241 DQHQSRLCDLQDIGGHIMKIPLVGFQILLFMRLEGTPSSARHIPIPLLFAPLFLLQGIGV 300

Query: 301 VFAAYRSMEKIIILLVGSPTSVRYLDIRSKARELLGFMHHGSRLLGWWSIDEGSQEEQAK 360
           +FA YR +EKI++LL  +  + RY  I SK R   GF+HHGSRLLGWWSIDEGS+EEQA+
Sbjct: 301 LFALYRLVEKIVLLLHSAAGTERYFAISSKVRSYFGFLHHGSRLLGWWSIDEGSREEQAR 360

Query: 361 LYSAGNSGYDTFTPETVKKRTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLYEKILC 420
           LY AG SGY+TF+P+TVKK  KS+L +EIWRLQAAL +QTE+TK S+QE E+L  EKILC
Sbjct: 361 LYYAGASGYNTFSPDTVKKLPKSDLAEEIWRLQAALGEQTEITKFSQQEFERLQNEKILC 420

Query: 421 RVCFDEPIDMVLLPCRHHILCSSCSEKCNRCPICRESIEERLPVNDV 451
           RVCFDE I+MVLLPCRHH+LCS+C EKC RCPICR  IEERLPV DV
Sbjct: 421 RVCFDEQINMVLLPCRHHVLCSTCCEKCKRCPICRVFIEERLPVYDV 464

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KN7M_ARATH	2.3e-09	56.82	Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana GN=KIN7M PE=2...	[more]
KN7D_ARATH	5.1e-09	41.67	Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana GN=KIN7D PE=2...	[more]
RNGB_DICDI	1.6e-07	39.44	RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2	[more]
RFFL_HUMAN	3.6e-07	48.84	E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1 SV=1	[more]
RFFL_MOUSE	3.6e-07	48.84	E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1 SV=1	[more]

BLAST of Cp4.1LG01g17670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2REQ6_GOSRA	1.7e-184	70.30	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1	[more]
A0A0D2RL54_GOSRA	2.2e-184	70.15	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G137800 PE=4 SV=1	[more]
D7T9A1_VITVI	1.1e-180	67.81	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02950 PE=4 SV=...	[more]
A0A061EIQ6_THECC	7.2e-180	69.23	Transmembrane Fragile-X-F-associated protein OS=Theobroma cacao GN=TCM_011872 PE...	[more]
V4KM49_EUTSA	6.1e-179	66.52	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10018496mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g17670 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68820.1	2.6e-181	66.52	Transmembrane Fragile-X-F-associated protein	[more]
AT1G73950.1	3.3e-160	60.99	Transmembrane Fragile-X-F-associated protein	[more]
AT1G18470.1	4.3e-160	60.68	Transmembrane Fragile-X-F-associated protein	[more]
AT2G21380.1	1.3e-10	56.82	Kinesin motor family protein	[more]
AT4G39050.1	2.8e-10	41.67	Kinesin motor family protein	[more]

BLAST of Cp4.1LG01g17670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|823157485\|ref\|XP_012478627.1\|	2.4e-184	70.30	PREDICTED: uncharacterized protein LOC105794150 isoform X2 [Gossypium raimondii]	[more]
gi\|763763077\|gb\|KJB30331.1\|	3.1e-184	70.15	hypothetical protein B456_005G137800 [Gossypium raimondii]	[more]
gi\|225423871\|ref\|XP_002281391.1\|	5.3e-184	68.52	PREDICTED: uncharacterized protein LOC100249082 isoform X1 [Vitis vinifera]	[more]
gi\|823157483\|ref\|XP_012478626.1\|	5.9e-183	69.85	PREDICTED: uncharacterized protein LOC105794150 isoform X1 [Gossypium raimondii]	[more]
gi\|731370640\|ref\|XP_010647974.1\|	1.0e-182	68.31	PREDICTED: uncharacterized protein LOC100249082 isoform X2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019396	TM_Fragile-X-F-assoc
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17670.1	Cp4.1LG01g17670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 403..438 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 387..444 score: 2.4
IPR019396	Transmembrane Fragile-X-F-associated protein	PFAM	PF10269	Tmemb_185A	coord: 35..175 score: 6.9E-50coord: 176..278 score: 2.0
None	No IPR available	PANTHER	PTHR10044	INHIBITOR OF APOPTOSIS	coord: 1..450 score: 1.3E
None	No IPR available	PANTHER	PTHR10044:SF122	SUBFAMILY NOT NAMED	coord: 1..450 score: 1.3E
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 402..443 score: 1.9
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 393..444 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g17670	CmoCh04G021070	Cucurbita moschata (Rifu)	cmocpeB685

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g17670	Wax gourd	cpewgoB0574
Cp4.1LG01g17670	Cucurbita pepo (Zucchini)	cpecpeB037
Cp4.1LG01g17670	Cucumber (Gy14) v1	cgycpeB0757
Cp4.1LG01g17670	Cucurbita maxima (Rimu)	cmacpeB436
Cp4.1LG01g17670	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g17670	Cucurbita moschata (Rifu)	cmocpeB400
Cp4.1LG01g17670	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g17670	Cucurbita moschata (Rifu)	cmocpeB680
Cp4.1LG01g17670	Cucurbita moschata (Rifu)	cmocpeB682
Cp4.1LG01g17670	Wild cucumber (PI 183967)	cpecpiB429
Cp4.1LG01g17670	Cucumber (Chinese Long) v2	cpecuB434
Cp4.1LG01g17670	Bottle gourd (USVL1VR-Ls)	cpelsiB313
Cp4.1LG01g17670	Watermelon (Charleston Gray)	cpewcgB400
Cp4.1LG01g17670	Watermelon (97103) v1	cpewmB439
Cp4.1LG01g17670	Melon (DHL92) v3.5.1	cpemeB387
Cp4.1LG01g17670	Cucumber (Gy14) v2	cgybcpeB640
Cp4.1LG01g17670	Melon (DHL92) v3.6.1	cpemedB448
Cp4.1LG01g17670	Silver-seed gourd	carcpeB1450
Cp4.1LG01g17670	Cucumber (Chinese Long) v3	cpecucB0535