CmoCh04G020540 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G020540
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCytochrome c
LocationCmo_Chr04 : 11465145 .. 11469719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAAATCAAAGCAAAATACAAAGAATGGTTTCTTCATCCTTCGTGAAACTCTGCGAACCCTAGCTCTCAGATCTGAACGCAACCTCATTCCAACGCCATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTAAGAATTTCTTTGCGATTGGAGATCGTTTGGTCTCTGTTGGTAATATGAACGAATCCAACCGTCTTCGGGGATCGTGACGCTGGTTTGAGCTAGCTTGAACCGATCTGATTGTTCTCTCTCTCTTTCTCTCCCCTCCCCAGCGCACTAGGTTTATAATAGTTAGTATCGGCCTTGATAAACACTTTTCGTGGAATCTCGATTGTTCTTGTCCGAGAAGGAAACCCCTGAAGGCATATATATATATATATATATTTTTTTTTTTTCTTTTTTCTTTTTTGGTTATTTGATTTGATGAAACGAATTTTAACATTTAGAAACGTAAACTATTATAGAAGCAATTACTAATATATCATATTTATATCTTTTTAAGTTGTGGTTTTTTAGAAATTGTTATCATCTATTAACTTGGTATGATAAGGTGGTATGTTTTTGTTTGATGTGATAGACATTGTTCAATATAAATTCTGATCGAGGTTAACGTTTAAATCTACATTTATCTGTGTCCATTTTTTGTATATTTGCTATTGTGGTTCTAGCTGCTATTCTTGTTATCTTATTTGTTATGATGATCAAGTTTTAACATCTCAACCTGGATGAAAATGTTGGGGTCTCAATTTAACAGAGATAAATGACCATTGAAGTATCGACTAAATGTCGGATGTAAATTTCTGGCTAAGTTACAAACAATGAATTCTAAAGAAAAAAAAAACATCGTGGAAATCAACATTTTTGAACTTTTAAAACAAGTTAAAATGACTATTTGACATTTTTTTTCCTCTTTTTCTCTTTTTTTTTATTATAAATTTTTATGTTTCATGGTTTTTTTTTAAAATTGTATAATGGAAATGATGAATCACCCCTTTTGTTGATGTCAAATCCATGGATGTGGAAATATCGATGGAAATGTTGAGTCGATGGAAATTTAGTTTACTGATAATGATTATATTTGACACTTTTAATTGGAGTAGAATTTGATCTCACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATGGGGTAAAAATCGGCTCTTCTTTGTTAGTATTTAAGTCGACACTAAAACTAGCAACGTCACTTGGATCTTGCAGGTCCCAATTTGAACGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGGTAGATACTCTCTATTTCTTAACACTTCTTAACGTATGGCATTTGATTTAGAGTTGGTTTATTTCCCTCAGTTTTCCAGATATCTTACTTGCTGAGTAAGTGATAGTAATTGTGAACACACACCTAAATAAGCATTGCCATGTTCTGTACTTGCTATCGGTAGCCTTGTTCTTCATAATACTTGTCCAACTGAGCAACAACTGATGAAATATTTTGGGCTCTTCGATCAACATGTCCCACCTTTTACCATCTTCTCCCTGGAGCTTTATTGAAGTACTTTTTTTAAACATTTCAAATAGCTTCAATTAAAAGTTATCCATGGAATCTTGCACCTTTTCTACTTTAATATAGTCAAAACAAAGCCTCCCCCCACTTGGAGTTTCAATCTTGATTTAAGCTAGAATCAAAAGCACCTTTAAAATTTCTCTCTTATATCTGAATATGCTTCAGACAATCTAGCATGTTAATATTTTTTTTTAGCACATTGAGTTTCATGATTTTCTCCAATTGCTTCTTAAGTCTCCATTAATAGAAAACACACTGTTCTCAACATAACCTAATGGTGAACCTGCACATTTGGGCATTAGTTGCGTTCCCCCCCTTTGATCTTTTTTGTCCTCCTTTTGTGGCTGGGTTCGTCCCGAGTCCTGTTCTCTTATTGGAAATCCTTGTTCACCCATAAGTTTCAATGGCTTTGGTTGGTGGAAAATTTGGTCTCTTCTTTTGCCACTCTTATTTCATGGACATAATTACGAAGGGAGCAAAAATTTCTTCTCTGCTCTCAGTTTGGCATGAAAGATATTCAAAAGCTTCCAAAGAAAGTGAAATAATCTTGGTGGTAACTTCTGAGTGGAAGTATCAACTCTTGCTACATCATTTATAAAATGTGTCTTTAGAGCTGTATTTCACCAGGTTGGTCTTCTATGTCGGAGTCCCTAGGTAATCTCCCTTTTCTGGAAACTTGTAATGGCACTACTACTCAGATGTGGTTGGTTCTTGACCTCCTTCCCTTAAAGACACTAAAGTCCTTTCTCTTTGTTCATTGAAGGTCATTCTTTCAAAAGTGAAAAGGTTTTGTGCATCAATGAATTGTGGGTTATTTTTGGCTTTTATGGCTCAAAGGGAAAGGAACACCACCGTTGTTTATAGCAACGGAAAACTCATGTTTGGCTCATGGCTTTTAATTGAATCACCGCTGTATATTATCCATTTAATATGTTAAAAGTAAAATTATACATTAAACTTTGTTGAATATATCATAATATTTCTCTTTTGTAATAGATAAGGAATATCTAAGTAAAATAATACCATTATCAGGCCTTAATCTTTTTGAATAATTATTTTGAAATATAAATATTTAGTTACTTCTCAAATTGTTGGTATGAGTTTTTTAGCATATGAATCTTTGTTTAATAGTGTTCTTAACTCTTATGCTTGCTATGGTTTTGAGGAATGCGAAGTTGTCAATTTTGAGTGCTCTCAACCCTATGAATTTTGTAGACGTGATTTATTTATGATCAGTTTTTCTGTTGAACTTGACATTTACTTGCATAATAGATGTTCTAACAAAAATTTGGATGTCTATTAATCACACAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGGTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCCCTTCATTAAATAAGAACATTTGAGGAAAATTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTGGTGAAAATCACAAGAGTTCCCTTTTTTTCATTAAATTCTTATTTCCCTGCGCTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACTTTATTGGTTTGTGAACATAACTGCTAAACTTTTTGGTAAAGCCGGTTATGGCAATCTTTTTTCATAATAATAGCACGCTTGTTAGAGCCTATCAATTCATTCAGCAATGCTTTAT

mRNA sequence

TATAAATCAAAGCAAAATACAAAGAATGGTTTCTTCATCCTTCGTGAAACTCTGCGAACCCTAGCTCTCAGATCTGAACGCAACCTCATTCCAACGCCATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCCAATTTGAACGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGGTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCCCTTCATTAAATAAGAACATTTGAGGAAAATTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTGGTGAAAATCACAAGAGTTCCCTTTTTTTCATTAAATTCTTATTTCCCTGCGCTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACTTTATTGGTTTGTGAACATAACTGCTAAACTTTTTGGTAAAGCCGGTTATGGCAATCTTTTTTCATAATAATAGCACGCTTGTTAGAGCCTATCAATTCATTCAGCAATGCTTTAT

Coding sequence (CDS)

ATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCCAATTTGAACGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA
Homology
[Close]
BLAST of CmoCh04G020540 vs. Swiss-Prot
Match: CYC_CUCMA (Cytochrome c OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.5e-60
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNRAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of CmoCh04G020540 vs. Swiss-Prot
Match: CYC_VIGRR (Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-59
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS AN
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111

[Close]
BLAST of CmoCh04G020540 vs. Swiss-Prot
Match: CYC2_ARATH (Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-58
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE TA
Sbjct: 61  NKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

[Close]
BLAST of CmoCh04G020540 vs. Swiss-Prot
Match: CYC_BRAOL (Cytochrome c OS=Brassica oleracea PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-58
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of CmoCh04G020540 vs. Swiss-Prot
Match: CYC_BRANA (Cytochrome c OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-58
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of CmoCh04G020540 vs. TrEMBL
Match: A0A151TAR6_CAJCA (Putative cytochrome c At4g10040 family OS=Cajanus cajan GN=KK1_018728 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.8e-59
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. TrEMBL
Match: A0A0A0KPD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.8e-59
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 112
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111

[Close]
BLAST of CmoCh04G020540 vs. TrEMBL
Match: A0A0D2TSA5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266800 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-58
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCSQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. TrEMBL
Match: A0A0B2QL57_GLYSO (Cytochrome c OS=Glycine soja GN=glysoja_042898 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-58
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYS A
Sbjct: 1   MASFDEAPPGNSKNGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. TrEMBL
Match: C6TJ91_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G246700 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-58
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYS A
Sbjct: 1   MASFDEAPPGNSKNGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. TAIR10
Match: AT4G10040.1 (AT4G10040.1 cytochrome c-2)

HSP 1 Score: 226.5 bits (576), Expect = 8.3e-60
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE TA
Sbjct: 61  NKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

[Close]
BLAST of CmoCh04G020540 vs. TAIR10
Match: AT1G22840.1 (AT1G22840.1 CYTOCHROME C-1)

HSP 1 Score: 221.1 bits (562), Expect = 3.5e-58
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. NCBI nr
Match: gi|449457373|ref|XP_004146423.1| (PREDICTED: cytochrome c [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 112
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111

[Close]
BLAST of CmoCh04G020540 vs. NCBI nr
Match: gi|1012352951|gb|KYP64139.1| (putative cytochrome c At4g10040 family [Cajanus cajan])

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. NCBI nr
Match: gi|659102910|ref|XP_008452381.1| (PREDICTED: cytochrome c [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA 112

[Close]
BLAST of CmoCh04G020540 vs. NCBI nr
Match: gi|823227200|ref|XP_012446433.1| (PREDICTED: cytochrome c [Gossypium raimondii])

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-58
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCSQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

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BLAST of CmoCh04G020540 vs. NCBI nr
Match: gi|729296184|ref|XP_010542745.1| (PREDICTED: cytochrome c [Tarenaya hassleriana])

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-58
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSKAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAV+WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKE+TA
Sbjct: 61  NKNMAVMWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATA 112

The following BLAST results are available for this feature:
BLAST of CmoCh04G020540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CYC_CUCMA3.5e-6098.20Cytochrome c OS=Cucurbita maxima PE=1 SV=1[more]
CYC_VIGRR1.7e-5997.30Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1[more]
CYC2_ARATH1.5e-5894.64Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1[more]
CYC_BRAOL1.9e-5896.40Cytochrome c OS=Brassica oleracea PE=1 SV=1[more]
CYC_BRANA1.9e-5896.40Cytochrome c OS=Brassica napus PE=1 SV=1[more]
BLAST of CmoCh04G020540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151TAR6_CAJCA7.8e-5998.21Putative cytochrome c At4g10040 family OS=Cajanus cajan GN=KK1_018728 PE=3 SV=1[more]
A0A0A0KPD8_CUCSA7.8e-5999.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1[more]
A0A0D2TSA5_GOSRA3.0e-5896.43Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266800 PE=3 SV=1[more]
A0A0B2QL57_GLYSO3.9e-5897.32Cytochrome c OS=Glycine soja GN=glysoja_042898 PE=3 SV=1[more]
C6TJ91_SOYBN3.9e-5897.32Uncharacterized protein OS=Glycine max GN=GLYMA_09G246700 PE=2 SV=1[more]
BLAST of CmoCh04G020540 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10040.18.3e-6094.64 cytochrome c-2[more]
AT1G22840.13.5e-5892.86 CYTOCHROME C-1[more]
BLAST of CmoCh04G020540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457373|ref|XP_004146423.1|1.1e-5899.10PREDICTED: cytochrome c [Cucumis sativus][more]
gi|1012352951|gb|KYP64139.1|1.1e-5898.21putative cytochrome c At4g10040 family [Cajanus cajan][more]
gi|659102910|ref|XP_008452381.1|1.1e-5898.21PREDICTED: cytochrome c [Cucumis melo][more]
gi|823227200|ref|XP_012446433.1|4.3e-5896.43PREDICTED: cytochrome c [Gossypium raimondii][more]
gi|729296184|ref|XP_010542745.1|4.3e-5896.43PREDICTED: cytochrome c [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002327Cyt_c_1A/1B
IPR009056Cyt_c-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0020037heme binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0070469 respiratory chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G020540.1CmoCh04G020540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002327Cytochrome c, class IA/ IBPRINTSPR00604CYTCHRMECIABcoord: 101..109
score: 1.9E-36coord: 84..94
score: 1.9E-36coord: 22..29
score: 1.9E-36coord: 65..81
score: 1.9E-36coord: 35..50
score: 1.9E-36coord: 51..61
score: 1.9
IPR002327Cytochrome c, class IA/ IBPANTHERPTHR11961CYTOCHROME Ccoord: 1..112
score: 1.6
IPR009056Cytochrome c-like domainGENE3DG3DSA:1.10.760.10coord: 9..110
score: 6.1
IPR009056Cytochrome c-like domainPFAMPF00034Cytochrom_Ccoord: 13..109
score: 3.0
IPR009056Cytochrome c-like domainPROFILEPS51007CYTCcoord: 10..111
score: 15
IPR009056Cytochrome c-like domainunknownSSF46626Cytochrome ccoord: 9..108
score: 8.78
NoneNo IPR availablePANTHERPTHR11961:SF8SUBFAMILY NOT NAMEDcoord: 1..112
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G020540CmaCh04G019360Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G020540Cla016943Watermelon (97103) v1cmowmB733
CmoCh04G020540ClCG11G000560Watermelon (Charleston Gray)cmowcgB623
CmoCh04G020540Lsi11G000540Bottle gourd (USVL1VR-Ls)cmolsiB623
CmoCh04G020540Cp4.1LG01g16770Cucurbita pepo (Zucchini)cmocpeB686
CmoCh04G020540Cla97C11G206880Watermelon (97103) v2cmowmbB699
CmoCh04G020540Bhi07G000003Wax gourdcmowgoB0906
CmoCh04G020540Carg24966Silver-seed gourdcarcmoB0992
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G020540Wax gourdcmowgoB0902
CmoCh04G020540Wax gourdcmowgoB0914
CmoCh04G020540Wild cucumber (PI 183967)cmocpiB754
CmoCh04G020540Cucumber (Chinese Long) v2cmocuB745
CmoCh04G020540Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G020540Cucurbita pepo (Zucchini)cmocpeB680
CmoCh04G020540Cucurbita pepo (Zucchini)cmocpeB682
CmoCh04G020540Melon (DHL92) v3.6.1cmomedB746