Carg24966 (gene) Silver-seed gourd

Overview
NameCarg24966
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCytochrome c
LocationCucurbita_argyrosperma_scaffold_234 : 297633 .. 301378 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCATCCTTCGTGAAACTCTGCGAACCCTAGCTCTCAGATCTGAACGCAACCTCATTCCAACGCCATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTAAGAATTTCTTTGCGATTGGAGATCGTTTGGTCTCTATTGGTAATATGAACGTATCCAACCGTCTTCGGGGATCGTGACGCTGATTTGAGCTAGCTTCAACCGATCTGATTGTTCTCTCTCTCTCTTTCTCTCCCCTCCCCAGCGCACTAGGTTTATAATAGTTAGTATCGGCCTTGATAAACACTTTTCGTGGAATCTCGATTGTTCTTGTCCGAGAAGGAAACCCCCGAAGGCATATATATATTTATTTATTTTCTTTTTTGGTTATTTGATTTGATGAAACGAATTTTAACATTTAGAAACGTAAACTATTATAGAAGCAATTACTAATATATCATATTTATATCTTTTTAAGTTGTGGTTTTTTAGAAATTGTTATCATCTATTAGCTTGGTATGATAAGCTGGTATGTTTTTGTTTGATGTGATAGACATTGTTCAATATTAATTCTGATCGAGGTTAACGTTTAAATCTACATTTATCTGTGTCCATTTTTTGTATATTTGCTATTGTGGTTCTAGCTGCTATTCTTGTTATCTTATTTGTTATGGTGATCAAGTTTTAACATCTCAACCTGGATGAAAATGTTGGGGTCTCAATTTAACAGAGATAAATGACCATTTAAGTATCGACTAAATGTCGGATGTAAATTTCTGGCTAAGTTACAAACAATGAATTCTAAAGAAAAAAAAAAAAAAAAACATCGTGGAAATCAACATTTTTGAACTTTTAAAACAAGTTAAAATGACTATTTGACATTTTTTCCCCTCTTTTTCTCTTTTTTTTTTTATTATAAATTTTTATGTTTCATGGTTTTTTTTTTTTTTTAAATTGTATAATGGAAATGATGAATCACCCCTTTTGTTGATGTCAAATCCATGTATGTGGAAATATCGATGGAAATGTTGAGTCGATGGAAATTTAGTTTACTGATAATGATTATATTTGACACTTTTAATTGGAGTAGAATTTGATCTCATCCCCCCGCTGGGTCATGGGGGAAAATCAGCTCTTCTTTGTTAGTATTTAAGTCGACACTAAAACTAGCAACGTCACTTGGATCTTGCAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGGTAGATACTCTCTATTTCTTAACACTTCTTAGCGTATGGCATTTGATTTAGAGTTGGTTTATTTCCCTGAGTTTTCCAGATGTCTTACTTGCCGATTAAGTGATAATAATTGTGAACACACACCTAAATAAGCGTTGCCATGTTCTGTACTTGCTATCGGTAGCCTTGTTCTTCATAATACTTGTCCAACTGAGCAACAGCTGATGAAATATTTTGGGCTCTTCGATCAACATGTCCCACCTTTTACCATCTTCTCCCTGGAGCTTTGTTAAAGTACTTTTTTTAAACATTTCAAATAGCTTCAATTAAAAGTTATCCATGGAATCTTGCACCTTTTCTACTTTAATATTGTCAAAACAAAGCCTCCCCCCACTTGGAGTTTCAATCTTGATTTAAGCTAGAATCAAAAGCACCCTTAAAATTTCTCTCTTATATCTGAATATGCTTCAGACAATCTAGCATGCTAATATTTTTTTTAGCACATTGAATTTCATGATTTTCTCCAATTGCGTCTTAAGTCTCCATTAATAGAAAACACACTGGTCTCAACATAACCTAATGGTGAACCTGCACATTTGGGCATTAGTTGCGTTCCCCCCCTTGATCTTTTTTGTCCTCCTTTTGTGGCTGGGTTCGTCCCGAGTCCTGTTCTCTTATTGGAAATCCTTGTTCACCCATAAGTTTCAATGGCTTTGGTTGGTGGAAAATTTGGTCTCTTCTTTTGCCACTCTTATTTCATGGACATAATTACGAAGGGAGCAAAAATTTCTTCTCTGCTCTCAGTTTGGCATGAAAGATATTCAAAAGCTTCCAAAGAAAGTGAAATAATCTTGGTTGTAACTTCTGAGTGGAAGTATCAACTCTTGCTACATCATTTATAAAATGTGTCTTTAGAGCTGTATTTCACCAGGTTGGTCTTCTGTGTCGGAGTCCCTAGGCAATCTCCCTTTTTTTGGAAACTTGTAATGGCACTACTACTCAGATGTGGTTGGTTCTTGACCTCCTTCCCTTGAAGACACTAAAGTCCTTTCTCTTTGTTCCTTGAAGGTCATTCTTTCAAAAGTGAAAAGGTTTTGTGCATCAATGAATTGTGGGTTATTTTTGGCTTTTATGGCTCAAAGGGAAAGGAACATCACCGTTGTTTATAACAACGGAAAACCCATGTTTTAATTGAATCACTGCTGTATATTATCCATTTAATATGTTAAAAGTAAAATTATACATTAAACTTTGTTGAATATATCATAATATTTCTGTTTTGTAATAGATAAGTAATATCTAAGTAAAATAATACCATTATCAGGCCTTAATCTTTTTGAATAATTATTTTGAAATATAAATATTTAGTTCTCAAATTGTTGGTATGAGTTTTTTAGCATATGAATCTTTGTTTAATAGTGTTCTTAACTCTTATGCTTGCTATGGTTTTGAGGAGTGCGAAGTTGTCAATTTTGAGTGCTCTCAACTCCATGAATTTTGTAGACGTGATTTATTAATGATCAGTTTTTCTGTTGAACTTGACATTTACTTGCATAATAGATGTTCTAACAAAAATTTTGCTGTCTATTATCACACAGTATATACCCGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCTACTCCCTTCATTAAATAAGAACATTGAGGAAAATTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGAAAATCACAAGAGTTCCCTTTTTTTCGTTAAATTCTTATTTCCCTTCGCTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTATTGGTTTGTGAACATAACTGCTAAACTTTTTGGTAAAGCCGGTTATGGCAATCCTTTTTCATAATAATAGCACGCTTGTTAGAGCCTATCAATTCATTCATCGATGCTTTATTAGGAAGAATACGCTTATGGTGGATATAATTTTGGTATTTTTGCAATGTAGTCTTGAATATCTTGATGTTAGTATGCATCTTTTTTACATTCAAATGATTCACATGGGCACTTCCTCTTCTATTATTTAGTTAACTTGCCTTGTCAACAACTAAAATATCAGGAGACATGACAGGAATTTGGCTCCATGAATTGACAAGACAGGTAGAGAAAAGTAGCAAGGATTCAGTTGTAGCGTCTACTCTTCATGAAATAACCAATCACAAAGTTGTATGGTTCCCACTTCTTTAGGGATGGCTCTCCA

mRNA sequence

CTTCATCCTTCGTGAAACTCTGCGAACCCTAGCTCTCAGATCTGAACGCAACCTCATTCCAACGCCATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCTACTCCCTTCATTAAATAAGAACATTGAGGAAAATTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGAAAATCACAAGAGTTCCCTTTTTTTCGTTAAATTCTTATTTCCCTTCGCTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTATTGGTTTGTGAACATAACTGCTAAACTTTTTGGTAAAGCCGGTTATGGCAATCCTTTTTCATAATAATAGCACGCTTGTTAGAGCCTATCAATTCATTCATCGATGCTTTATTAGGAAGAATACGCTTATGGTGGATATAATTTTGGTATTTTTGCAATGTAGTCTTGAATATCTTGATGTTAGTATGCATCTTTTTTACATTCAAATGATTCACATGGGCACTTCCTCTTCTATTATTTAGTTAACTTGCCTTGTCAACAACTAAAATATCAGGAGACATGACAGGAATTTGGCTCCATGAATTGACAAGACAGGTAGAGAAAAGTAGCAAGGATTCAGTTGTAGCGTCTACTCTTCATGAAATAACCAATCACAAAGTTGTATGGTTCCCACTTCTTTAGGGATGGCTCTCCA

Coding sequence (CDS)

ATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCATAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA

Protein sequence

MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Homology
[Close]
BLAST of Carg24966 vs. NCBI nr
Match: XP_022930036.1 (cytochrome c [Cucurbita moschata] >XP_022994612.1 cytochrome c [Cucurbita maxima] >XP_023530772.1 cytochrome c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-59
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. NCBI nr
Match: XP_004146423.1 (PREDICTED: cytochrome c [Cucumis sativus] >KGN50769.1 hypothetical protein Csa_5G244150 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-58
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 112
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111

[Close]
BLAST of Carg24966 vs. NCBI nr
Match: XP_008452381.1 (PREDICTED: cytochrome c [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. NCBI nr
Match: XP_020218493.1 (cytochrome c [Cajanus cajan] >KYP64139.1 putative cytochrome c At4g10040 family [Cajanus cajan])

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. NCBI nr
Match: XP_016748672.1 (PREDICTED: cytochrome c [Gossypium hirsutum] >PPR81160.1 hypothetical protein GOBAR_AA39551 [Gossypium barbadense])

HSP 1 Score: 233.4 bits (594), Expect = 3.7e-58
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASF++APPGN+KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. TAIR10
Match: AT4G10040.1 (cytochrome c-2)

HSP 1 Score: 226.5 bits (576), Expect = 8.3e-60
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE TA
Sbjct: 61  NKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

[Close]
BLAST of Carg24966 vs. TAIR10
Match: AT1G22840.1 (CYTOCHROME C-1)

HSP 1 Score: 221.1 bits (562), Expect = 3.5e-58
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAA
Sbjct: 1   MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGPNLNGLFGRQSGTTAGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. Swiss-Prot
Match: sp|P00051|CYC_CUCMA (Cytochrome c OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.5e-60
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNRAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of Carg24966 vs. Swiss-Prot
Match: sp|P00052|CYC_VIGRR (Cytochrome c OS=Vigna radiata var. radiata OX=3916 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-59
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS AN
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSTAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 111

[Close]
BLAST of Carg24966 vs. Swiss-Prot
Match: sp|Q9T0G2|CYC2_ARATH (Cytochrome c-2 OS=Arabidopsis thaliana OX=3702 GN=CYTC-2 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-58
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE TA
Sbjct: 61  NKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

[Close]
BLAST of Carg24966 vs. Swiss-Prot
Match: sp|P62772|CYC_BRANA (Cytochrome c OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-58
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of Carg24966 vs. Swiss-Prot
Match: sp|P62773|CYC_BRAOL (Cytochrome c OS=Brassica oleracea OX=3712 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-58
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAAN 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAAN
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAAN 60

Query: 62  KNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           KN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Sbjct: 61  KNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]
BLAST of Carg24966 vs. TrEMBL
Match: tr|A0A1S3BUU3|A0A1S3BUU3_CUCME (cytochrome c OS=Cucumis melo OX=3656 GN=LOC103493436 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. TrEMBL
Match: tr|A0A0A0KPD8|A0A0A0KPD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G244150 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 112
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEST 111

[Close]
BLAST of Carg24966 vs. TrEMBL
Match: tr|A0A151TAR6|A0A151TAR6_CAJCA (Putative cytochrome c At4g10040 family OS=Cajanus cajan OX=3821 GN=KK1_018728 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. TrEMBL
Match: tr|A0A1U8PBV1|A0A1U8PBV1_GOSHI (cytochrome c OS=Gossypium hirsutum OX=3635 GN=LOC107957634 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASF++APPGN+KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]
BLAST of Carg24966 vs. TrEMBL
Match: tr|A0A2P5VQU3|A0A2P5VQU3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA39551 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60
           MASF++APPGN+KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAA 60

Query: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 113
           NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Sbjct: 61  NKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

The following BLAST results are available for this feature:
BLAST of Carg24966 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022930036.12.6e-59100.00cytochrome c [Cucurbita moschata] >XP_022994612.1 cytochrome c [Cucurbita maxima... [more]
XP_004146423.12.2e-5899.10PREDICTED: cytochrome c [Cucumis sativus] >KGN50769.1 hypothetical protein Csa_5... [more]
XP_008452381.12.2e-5898.21PREDICTED: cytochrome c [Cucumis melo][more]
XP_020218493.12.2e-5898.21cytochrome c [Cajanus cajan] >KYP64139.1 putative cytochrome c At4g10040 family ... [more]
XP_016748672.13.7e-5897.32PREDICTED: cytochrome c [Gossypium hirsutum] >PPR81160.1 hypothetical protein GO... [more]
BLAST of Carg24966 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10040.18.3e-6094.64cytochrome c-2[more]
AT1G22840.13.5e-5892.86CYTOCHROME C-1[more]
BLAST of Carg24966 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P00051|CYC_CUCMA3.5e-6098.20Cytochrome c OS=Cucurbita maxima OX=3661 PE=1 SV=1[more]
sp|P00052|CYC_VIGRR1.8e-5997.30Cytochrome c OS=Vigna radiata var. radiata OX=3916 PE=1 SV=1[more]
sp|Q9T0G2|CYC2_ARATH1.5e-5894.64Cytochrome c-2 OS=Arabidopsis thaliana OX=3702 GN=CYTC-2 PE=1 SV=1[more]
sp|P62772|CYC_BRANA1.9e-5896.40Cytochrome c OS=Brassica napus OX=3708 PE=1 SV=1[more]
sp|P62773|CYC_BRAOL1.9e-5896.40Cytochrome c OS=Brassica oleracea OX=3712 PE=1 SV=1[more]
BLAST of Carg24966 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BUU3|A0A1S3BUU3_CUCME1.4e-5898.21cytochrome c OS=Cucumis melo OX=3656 GN=LOC103493436 PE=3 SV=1[more]
tr|A0A0A0KPD8|A0A0A0KPD8_CUCSA1.4e-5899.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G244150 PE=3 SV=1[more]
tr|A0A151TAR6|A0A151TAR6_CAJCA1.4e-5898.21Putative cytochrome c At4g10040 family OS=Cajanus cajan OX=3821 GN=KK1_018728 PE... [more]
tr|A0A1U8PBV1|A0A1U8PBV1_GOSHI2.5e-5897.32cytochrome c OS=Gossypium hirsutum OX=3635 GN=LOC107957634 PE=3 SV=1[more]
tr|A0A2P5VQU3|A0A2P5VQU3_GOSBA2.5e-5897.32Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA39551 PE=3 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR009056Cyt_c-like_dom
IPR036909Cyt_c-like_dom_sf
IPR002327Cyt_c_1A/1B
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24966-RACarg24966-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002327Cytochrome c, class IA/ IBPRINTSPR00604CYTCHRMECIABcoord: 101..109
score: 78.4
coord: 84..94
score: 81.56
coord: 22..29
score: 83.53
coord: 65..81
score: 58.88
coord: 35..50
score: 75.76
coord: 51..61
score: 61.26
IPR002327Cytochrome c, class IA/ IBPANTHERPTHR11961CYTOCHROME Ccoord: 1..111
IPR036909Cytochrome c-like domain superfamilyGENE3DG3DSA:1.10.760.10coord: 1..111
e-value: 1.5E-42
score: 146.5
IPR036909Cytochrome c-like domain superfamilySUPERFAMILYSSF46626Cytochrome ccoord: 9..108
IPR009056Cytochrome c-like domainPFAMPF00034Cytochrom_Ccoord: 13..109
e-value: 3.3E-13
score: 50.5
IPR009056Cytochrome c-like domainPROSITEPS51007CYTCcoord: 10..111
score: 15.982
NoneNo IPR availablePANTHERPTHR11961:SF9CYTOCHROME C-1-RELATEDcoord: 1..111

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24966Cla016943Watermelon (97103) v1carwmB0727
Carg24966ClCG11G000560Watermelon (Charleston Gray)carwcgB0706
Carg24966CmaCh04G019360Cucurbita maxima (Rimu)carcmaB1020
Carg24966CmoCh04G020540Cucurbita moschata (Rifu)carcmoB0992
Carg24966Lsi11G000540Bottle gourd (USVL1VR-Ls)carlsiB667
Carg24966Cp4.1LG01g16770Cucurbita pepo (Zucchini)carcpeB1026
Carg24966Cla97C11G206880Watermelon (97103) v2carwmbB0762
Carg24966Bhi07G000003Wax gourdcarwgoB0861
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None