CmoCh04G015400 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G015400
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionFasciclin-like arabinogalactan protein
LocationCmo_Chr04 : 7879139 .. 7880119 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCCACTCCTCGTCTCTCTCATCCTTTTTTCTCTCTTCTCTCTCTCTTCCCCTTTACCCTCTGTAACTGTTCTCAACGCTGCCGAAATCTTGTCCGACAATGGCTTTGTCTCAATGGCTCTTACGCTTGAGCTTATAGCCGAATCTTTGCTCTCACAGACAAATTCAATGACGATCTTCACACCTTCGGACACTGCTTTCGTTCAATCGGGTCAGCCTTCTCTCTCTCTCCTTCAATTCCACTTCTCGCCGCTCTACTCATCTCCTGAAAGCCTCAAATCGCTTGCGTTGGGCACCAAGATTCCTACGATGTTGGCTGGTCGATCGCTTACGGTAACCTCTTCCCGATCTGATTCTAAAGTTTCTTTAAACGGAGTAAAGATTAGTAACTCGCCGTTATACGATGACGGTTCGCTTGCTGTTTTCGGTATCGAGAAGTTTTTTAACCTAATATTCCAAGTTCCACCGCTTACTCCAAGTCCGAGTGCGAAATTTCGGTGTGGTCCATTGACGTTTAAGAATCCGTTTAGTGAAGCGATAAAAACTCTACGGTCTAATGGATATTCTTCAATGGCATTATTTCTTGAATCTCAGATTATAGGGTTTAATAATGGTCAATCCATGATGACCATCTTTGCTCCTTCCGATGATGCATTGGCTACTCGCATTGATAACTTTACCGATTACCCATCTCTATATTTTCGTCAGATTTTACCGTGCAGGATCTTGTGGAATGATTTAGCGAATCTTGAGGAAGGCACAGAGTTATCTACATATTCGGAGGGATACGAACTTTATATAGCGAAATCAAGCGGCATGTTGAGGATCAATGGAGTTGCAGTCTTCTACCCTAACATGTATTTGAACGAGTGGCTAGTGATCCATGGCCTTCTTGATGTTTTTTCTGCGGCAGAGAGAATCTCAGCAGAGGAATCAGATTCAGAAATGCATGGGATGGCAATGGATCACTGGTAA

mRNA sequence

ATGGCTTCCCCACTCCTCGTCTCTCTCATCCTTTTTTCTCTCTTCTCTCTCTCTTCCCCTTTACCCTCTGTAACTGTTCTCAACGCTGCCGAAATCTTGTCCGACAATGGCTTTGTCTCAATGGCTCTTACGCTTGAGCTTATAGCCGAATCTTTGCTCTCACAGACAAATTCAATGACGATCTTCACACCTTCGGACACTGCTTTCGTTCAATCGGGTCAGCCTTCTCTCTCTCTCCTTCAATTCCACTTCTCGCCGCTCTACTCATCTCCTGAAAGCCTCAAATCGCTTGCGTTGGGCACCAAGATTCCTACGATGTTGGCTGGTCGATCGCTTACGGTAACCTCTTCCCGATCTGATTCTAAAGTTTCTTTAAACGGAGTAAAGATTAGTAACTCGCCGTTATACGATGACGGTTCGCTTGCTGTTTTCGGTATCGAGAAGTTTTTTAACCTAATATTCCAAGTTCCACCGCTTACTCCAAGTCCGAGTGCGAAATTTCGGTGTGGTCCATTGACGTTTAAGAATCCGTTTAGTGAAGCGATAAAAACTCTACGGTCTAATGGATATTCTTCAATGGCATTATTTCTTGAATCTCAGATTATAGGGTTTAATAATGGTCAATCCATGATGACCATCTTTGCTCCTTCCGATGATGCATTGGCTACTCGCATTGATAACTTTACCGATTACCCATCTCTATATTTTCGTCAGATTTTACCGTGCAGGATCTTGTGGAATGATTTAGCGAATCTTGAGGAAGGCACAGAGTTATCTACATATTCGGAGGGATACGAACTTTATATAGCGAAATCAAGCGGCATGTTGAGGATCAATGGAGTTGCAGTCTTCTACCCTAACATGTATTTGAACGAGTGGCTAGTGATCCATGGCCTTCTTGATGTTTTTTCTGCGGCAGAGAGAATCTCAGCAGAGGAATCAGATTCAGAAATGCATGGGATGGCAATGGATCACTGGTAA

Coding sequence (CDS)

ATGGCTTCCCCACTCCTCGTCTCTCTCATCCTTTTTTCTCTCTTCTCTCTCTCTTCCCCTTTACCCTCTGTAACTGTTCTCAACGCTGCCGAAATCTTGTCCGACAATGGCTTTGTCTCAATGGCTCTTACGCTTGAGCTTATAGCCGAATCTTTGCTCTCACAGACAAATTCAATGACGATCTTCACACCTTCGGACACTGCTTTCGTTCAATCGGGTCAGCCTTCTCTCTCTCTCCTTCAATTCCACTTCTCGCCGCTCTACTCATCTCCTGAAAGCCTCAAATCGCTTGCGTTGGGCACCAAGATTCCTACGATGTTGGCTGGTCGATCGCTTACGGTAACCTCTTCCCGATCTGATTCTAAAGTTTCTTTAAACGGAGTAAAGATTAGTAACTCGCCGTTATACGATGACGGTTCGCTTGCTGTTTTCGGTATCGAGAAGTTTTTTAACCTAATATTCCAAGTTCCACCGCTTACTCCAAGTCCGAGTGCGAAATTTCGGTGTGGTCCATTGACGTTTAAGAATCCGTTTAGTGAAGCGATAAAAACTCTACGGTCTAATGGATATTCTTCAATGGCATTATTTCTTGAATCTCAGATTATAGGGTTTAATAATGGTCAATCCATGATGACCATCTTTGCTCCTTCCGATGATGCATTGGCTACTCGCATTGATAACTTTACCGATTACCCATCTCTATATTTTCGTCAGATTTTACCGTGCAGGATCTTGTGGAATGATTTAGCGAATCTTGAGGAAGGCACAGAGTTATCTACATATTCGGAGGGATACGAACTTTATATAGCGAAATCAAGCGGCATGTTGAGGATCAATGGAGTTGCAGTCTTCTACCCTAACATGTATTTGAACGAGTGGCTAGTGATCCATGGCCTTCTTGATGTTTTTTCTGCGGCAGAGAGAATCTCAGCAGAGGAATCAGATTCAGAAATGCATGGGATGGCAATGGATCACTGGTAA
Homology
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BLAST of CmoCh04G015400 vs. Swiss-Prot
Match: FLA20_ARATH (Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana GN=FLA20 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-41
Identity = 117/348 (33.62%), Postives = 187/348 (53.74%), Query Frame = 1 

Query: 1   MASPLLVSLIL-FSLFSLSSPLPSVT-VLNAAEILSDNGFVSMALTLELIAESL-LSQTN 60
           MAS LL +  L F +  +     S+T V +A E+LSD+G++SM LTL+L  + L L    
Sbjct: 42  MASKLLTTFFLIFFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQ 101

Query: 61  SMTIFTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVT-S 120
            +T+F PSD +F + GQPSL  +++  SP     E+L++L  G KIPT+ +  SLTVT S
Sbjct: 102 ELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNS 161

Query: 121 SRSDSKVSLNGVKISNSPLYDDGSLAVFGIEKFF----------NLIFQVPPLT------ 180
           SR   K S+N V + +SP++DDG + ++G ++FF          +    +P  T      
Sbjct: 162 SRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSI 221

Query: 181 ----------PSPSAKF--------RCGPLTFKNPFSEAIKTLRSNGYSSMALFLESQII 240
                     PSP+           R  P+   N F  A + L S G+  +A FL  Q+ 
Sbjct: 222 PIPSSATQTPPSPNIASDSTRNLPNRSKPVNRFNIFESASRLLMSRGFVIIATFLALQLE 281

Query: 241 GFNNG-QSMMTIFAPSDDALATRIDNFTDYPSLYFRQILPCRILWNDLANL-EEGTELST 300
              +G  + +T+FAP D+A+      F+DY +++   ++   +LW DL    +EG+ L T
Sbjct: 282 DNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQT 341

Query: 301 YSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGLLDVFSAAER 309
             +GYE+ I+ S  +L +NGV + YP++Y+N+W+ +HG   +    E+
Sbjct: 342 VLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMIVTKEK 389

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BLAST of CmoCh04G015400 vs. TrEMBL
Match: A0A0A0KUM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611680 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 7.4e-126
Identity = 241/318 (75.79%), Postives = 273/318 (85.85%), Query Frame = 1 

Query: 2   ASPLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTI 61
           +S L +SLIL SLFSLSSPL S TVL+AAEILS+NGFVSMALTLELIA+SLLSQ+NS+TI
Sbjct: 3   SSTLFISLILLSLFSLSSPLTSETVLDAAEILSNNGFVSMALTLELIADSLLSQSNSITI 62

Query: 62  FTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDS 121
           F+P DT+FVQSGQPSLSLL+FHF PLY S  SL+S A GTKIPTML  +SLTVT+ +SDS
Sbjct: 63  FSPPDTSFVQSGQPSLSLLRFHFLPLYLSSGSLRSFAFGTKIPTMLPSQSLTVTTPQSDS 122

Query: 122 KVSLNGVKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCGPLTFKNPFSEA 181
            +SLN VK+S+SP YDDG L V+GIEKFF+L F       SP+ KFRC  LT +NPF EA
Sbjct: 123 VISLNRVKVSSSPFYDDGLLVVYGIEKFFDLKFH------SPNMKFRCDLLTIRNPFGEA 182

Query: 182 IKTLRSNGYSSMALFLESQIIGFNNGQ-SMMTIFAPSDDALATRIDNFTDYPSLYFRQIL 241
           I+TLRS+GYSSMALFLESQI+GF+NGQ SMMT+FAPSDDAL TR+D FTDYPSLYFRQI 
Sbjct: 183 IETLRSHGYSSMALFLESQILGFSNGQSSMMTVFAPSDDALETRVDKFTDYPSLYFRQIS 242

Query: 242 PCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGLL 301
           PCRI WNDL +LE+GTELSTYSEGY +Y+ KSSGMLRINGVAVFYPNMYLNEWLV+HGLL
Sbjct: 243 PCRISWNDLVDLEDGTELSTYSEGYTIYVTKSSGMLRINGVAVFYPNMYLNEWLVVHGLL 302

Query: 302 DVFSAAERISAEESDSEM 319
           DVF  AERIS  ESDSEM
Sbjct: 303 DVFPVAERISTVESDSEM 314

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BLAST of CmoCh04G015400 vs. TrEMBL
Match: K7LLL3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G265700 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.0e-75
Identity = 147/308 (47.73%), Postives = 218/308 (70.78%), Query Frame = 1 

Query: 4   PLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTIFT 63
           PLL+ ++ F  FS    LP   + +AA++LSD+G+VSMALTLE++AE+LL Q+ S T+F 
Sbjct: 6   PLLLLILPFIFFSFGRALPREAIFDAADVLSDSGYVSMALTLEIVAETLLEQSPSATVFA 65

Query: 64  PSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDSKV 123
           PSD+AF +SGQPSL LL+FH SPL   P SL+ L  G+KIPTML G++LTVT+S SD   
Sbjct: 66  PSDSAFKKSGQPSLDLLRFHLSPLPLPPASLRLLTAGSKIPTMLPGQTLTVTTSSSDRVT 125

Query: 124 SLNGVKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCG----PLTFKNPFS 183
           S N +K++ SP+YDDG L V+GI++FF+  FQ     PS ++   C       +  + F 
Sbjct: 126 SFNNIKLTGSPIYDDGILLVYGIDRFFDPTFQFNSQRPSDNSDTSCSAKNHTASASDSFD 185

Query: 184 EAIKTLRSNGYSSMALFLESQIIGFNNGQSMMTIFAPSDDALATRIDNFTDYPSLYFRQI 243
           +AI+TL++ GYS+MA FL  Q+ G  + QS +T+FAP+DD + +RI +F +YPS + R +
Sbjct: 186 QAIQTLKTGGYSAMASFLGMQLSGVAD-QSGITVFAPTDDTVMSRIGDFGEYPSFFRRHV 245

Query: 244 LPCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGL 303
           +PCR+LWNDL N  +G+EL T+ +G+ + I +S G+L +NGV VF+P+++ N+ +V+HG+
Sbjct: 246 VPCRLLWNDLVNFGDGSELPTFLDGFAINITRSDGVLILNGVPVFFPDVFFNDRVVVHGV 305

Query: 304 LDVFSAAE 308
            DV +A +
Sbjct: 306 SDVLAAQD 312

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BLAST of CmoCh04G015400 vs. TrEMBL
Match: M5Y0U7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021895mg PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74
Identity = 171/333 (51.35%), Postives = 221/333 (66.37%), Query Frame = 1 

Query: 1   MASPLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMT 60
           MA+ LLVSLIL SL SLSS LP+  VL+AAEILSD+GFVSMALTLEL+++SL+ Q+ S+T
Sbjct: 1   MAALLLVSLILLSLLSLSSSLPNQAVLDAAEILSDSGFVSMALTLELVSQSLVPQSPSLT 60

Query: 61  IFTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSD 120
           IF P DTAF +SGQPSLSLLQ HF PL    ++LK+L  GTKIPT+L+G SL VT+  S 
Sbjct: 61  IFAPPDTAFTRSGQPSLSLLQIHFCPLPLPLQTLKALPAGTKIPTLLSGHSLIVTTPSSG 120

Query: 121 SKVSLNGVKI-SNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCGPLTFKNP-- 180
           + +SLN VKI S +PLYDDG L +FG++KFF+  FQ+P    SP     C   T  +   
Sbjct: 121 APISLNNVKITSAAPLYDDGFLIIFGVDKFFDANFQLPIPIRSPVPDPVCESSTSSSSAN 180

Query: 181 ------------FSEAIKTLRSNGYSSMALFLESQIIGFNNGQSMMTIFAPSDDALATRI 240
                       F  A   LRSNGY+ MA FL+ Q++GF N  S MT+FAP D A    I
Sbjct: 181 VTTTIGFPGASWFEGASAVLRSNGYNVMASFLDLQLVGFKNPNS-MTVFAPLDQA----I 240

Query: 241 DNFTDYPSLYFRQILPCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFY 300
           +N   YPS++ R ++PCR+LW+DL    EGT L TY EG+ + I++S  +L +NGV VF+
Sbjct: 241 ENPLQYPSIFLRHVVPCRLLWSDLVRFNEGTVLPTYMEGFTITISRSGDVLLLNGVPVFF 300

Query: 301 PNMYLNEWLVIHGLLDVFSAAERIS-AEESDSE 318
            NMY ++ LV+HGL +     E    A+ES  E
Sbjct: 301 ANMYYSDSLVVHGLRESLVMLEMPEVADESSPE 328

[Close]
BLAST of CmoCh04G015400 vs. TrEMBL
Match: W9RD61_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025876 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-74
Identity = 162/325 (49.85%), Postives = 227/325 (69.85%), Query Frame = 1 

Query: 4   PLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTIFT 63
           P++  L+LFSL SLSS LPS TVL+A+EIL+D+G VSMALTLEL++++L  ++ S+TIF 
Sbjct: 6   PIISFLVLFSLPSLSSSLPSDTVLDASEILTDSGHVSMALTLELVSQTLTLKSPSLTIFA 65

Query: 64  PSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDSKV 123
           P D AF +SGQP+LSLLQ+HF PL  S E +KSL  GTKIPT+L+G  L VTSS  DS++
Sbjct: 66  PPDAAFSKSGQPALSLLQYHFCPLPLSLEKIKSLPAGTKIPTLLSGHVLIVTSSPFDSQI 125

Query: 124 SLNGVKI-SNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRC--GPLTFKNP--F 183
           SLN VKI S SP+++DGSL +FGIE FF+L +Q P   PSP +   C   P  F     F
Sbjct: 126 SLNNVKITSESPIFNDGSLIIFGIEDFFDLNYQDPGSVPSPRSGSICELSPTVFPGASWF 185

Query: 184 SEAIKTLRSNGYSSMALFLESQIIGFNNGQS-MMTIFAPSDDALATRIDNFTDYPSLYFR 243
            EA   LR NGYS+MA FL+ Q++GF+  +S  MT+FAP+D A++ R    +  PS++ R
Sbjct: 186 KEASDNLRFNGYSAMAAFLDLQLLGFDKERSAAMTVFAPTDQAMSKRPSQHSS-PSIFLR 245

Query: 244 QILPCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIH 303
            ++PCR+LW+DL +L  GT L TYSEG+ + + +S  +L +NG+ VFY NM+ ++ + +H
Sbjct: 246 HVVPCRLLWSDLMSLSAGTVLPTYSEGFTITVTRSDSVLMLNGIPVFYANMHYSDSVAVH 305

Query: 304 GLLDVF-----SAAERISAEESDSE 318
           GL ++      + +E +SA  S+ E
Sbjct: 306 GLNEILVPQEVAESEPLSAPVSEPE 329

[Close]
BLAST of CmoCh04G015400 vs. TrEMBL
Match: V7BBQ6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G037300g PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.6e-74
Identity = 141/299 (47.16%), Postives = 217/299 (72.58%), Query Frame = 1 

Query: 8   SLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTIFTPSDT 67
           + +    FSL+  LP   + +AA++LSD+GFVSMALTLE++AE+LL Q+ S T+F PSD+
Sbjct: 5   AFVFVLFFSLAGALPREAIFDAADVLSDSGFVSMALTLEVVAETLLEQSPSATVFAPSDS 64

Query: 68  AFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDSKVSLNG 127
           AF +SGQPSL LL+FH +PL  +P SL+ L  G KIPTML+G+SLT T+S +D   S+N 
Sbjct: 65  AFKKSGQPSLDLLRFHLAPLPLTPSSLRLLTAGAKIPTMLSGQSLTATTSSADRLTSINN 124

Query: 128 VKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPS-PSAKFRCGPLTFKNPFSEAIKTLR 187
           +K++ SP+YDDGSL V+GI++FF+  FQ+P  + S  S   +    +  + F++AI+TL+
Sbjct: 125 IKLTQSPIYDDGSLLVYGIDRFFDPNFQLPSSSDSNSSCSAKNHTASVSDSFNQAIQTLK 184

Query: 188 SNGYSSMALFLESQIIGFNNGQSMMTIFAPSDDALATRIDNFTDYPSLYFRQILPCRILW 247
           + GYS++A FLE Q+ G     S +T+FAP+DD +  RI +F+ YPS + R ++PCR+LW
Sbjct: 185 TGGYSAVAAFLEMQLFGVAE-FSGITVFAPADDLVLNRIGDFSQYPSFFRRHVVPCRLLW 244

Query: 248 NDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGLLDVFSA 306
           NDL N ++G+ELS++ EG+ + I +S G+L  NGV VF+P+++ N+ +V+HG+ ++ ++
Sbjct: 245 NDLVNFDDGSELSSFLEGFTINITRSGGVLVFNGVPVFFPDVFFNDRIVVHGVSNILAS 302

[Close]
BLAST of CmoCh04G015400 vs. TAIR10
Match: AT5G40940.1 (AT5G40940.1 putative fasciclin-like arabinogalactan protein 20)

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-42
Identity = 117/348 (33.62%), Postives = 187/348 (53.74%), Query Frame = 1 

Query: 1   MASPLLVSLIL-FSLFSLSSPLPSVT-VLNAAEILSDNGFVSMALTLELIAESL-LSQTN 60
           MAS LL +  L F +  +     S+T V +A E+LSD+G++SM LTL+L  + L L    
Sbjct: 42  MASKLLTTFFLIFFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQ 101

Query: 61  SMTIFTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVT-S 120
            +T+F PSD +F + GQPSL  +++  SP     E+L++L  G KIPT+ +  SLTVT S
Sbjct: 102 ELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNS 161

Query: 121 SRSDSKVSLNGVKISNSPLYDDGSLAVFGIEKFF----------NLIFQVPPLT------ 180
           SR   K S+N V + +SP++DDG + ++G ++FF          +    +P  T      
Sbjct: 162 SRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSI 221

Query: 181 ----------PSPSAKF--------RCGPLTFKNPFSEAIKTLRSNGYSSMALFLESQII 240
                     PSP+           R  P+   N F  A + L S G+  +A FL  Q+ 
Sbjct: 222 PIPSSATQTPPSPNIASDSTRNLPNRSKPVNRFNIFESASRLLMSRGFVIIATFLALQLE 281

Query: 241 GFNNG-QSMMTIFAPSDDALATRIDNFTDYPSLYFRQILPCRILWNDLANL-EEGTELST 300
              +G  + +T+FAP D+A+      F+DY +++   ++   +LW DL    +EG+ L T
Sbjct: 282 DNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQT 341

Query: 301 YSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGLLDVFSAAER 309
             +GYE+ I+ S  +L +NGV + YP++Y+N+W+ +HG   +    E+
Sbjct: 342 VLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMIVTKEK 389

[Close]
BLAST of CmoCh04G015400 vs. NCBI nr
Match: gi|778708686|ref|XP_004135381.2| (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 1.1e-125
Identity = 241/318 (75.79%), Postives = 273/318 (85.85%), Query Frame = 1 

Query: 2   ASPLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTI 61
           +S L +SLIL SLFSLSSPL S TVL+AAEILS+NGFVSMALTLELIA+SLLSQ+NS+TI
Sbjct: 3   SSTLFISLILLSLFSLSSPLTSETVLDAAEILSNNGFVSMALTLELIADSLLSQSNSITI 62

Query: 62  FTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDS 121
           F+P DT+FVQSGQPSLSLL+FHF PLY S  SL+S A GTKIPTML  +SLTVT+ +SDS
Sbjct: 63  FSPPDTSFVQSGQPSLSLLRFHFLPLYLSSGSLRSFAFGTKIPTMLPSQSLTVTTPQSDS 122

Query: 122 KVSLNGVKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCGPLTFKNPFSEA 181
            +SLN VK+S+SP YDDG L V+GIEKFF+L F       SP+ KFRC  LT +NPF EA
Sbjct: 123 VISLNRVKVSSSPFYDDGLLVVYGIEKFFDLKFH------SPNMKFRCDLLTIRNPFGEA 182

Query: 182 IKTLRSNGYSSMALFLESQIIGFNNGQ-SMMTIFAPSDDALATRIDNFTDYPSLYFRQIL 241
           I+TLRS+GYSSMALFLESQI+GF+NGQ SMMT+FAPSDDAL TR+D FTDYPSLYFRQI 
Sbjct: 183 IETLRSHGYSSMALFLESQILGFSNGQSSMMTVFAPSDDALETRVDKFTDYPSLYFRQIS 242

Query: 242 PCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGLL 301
           PCRI WNDL +LE+GTELSTYSEGY +Y+ KSSGMLRINGVAVFYPNMYLNEWLV+HGLL
Sbjct: 243 PCRISWNDLVDLEDGTELSTYSEGYTIYVTKSSGMLRINGVAVFYPNMYLNEWLVVHGLL 302

Query: 302 DVFSAAERISAEESDSEM 319
           DVF  AERIS  ESDSEM
Sbjct: 303 DVFPVAERISTVESDSEM 314

[Close]
BLAST of CmoCh04G015400 vs. NCBI nr
Match: gi|659091712|ref|XP_008446692.1| (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis melo])

HSP 1 Score: 458.0 bits (1177), Expect = 1.4e-125
Identity = 241/318 (75.79%), Postives = 272/318 (85.53%), Query Frame = 1 

Query: 2   ASPLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTI 61
           +S L +SLIL SLFSLSS L S TVL+AAEILSDNGFVSMALTLELIAESLLSQ+NS+TI
Sbjct: 3   SSTLFISLILLSLFSLSSSLTSETVLDAAEILSDNGFVSMALTLELIAESLLSQSNSITI 62

Query: 62  FTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDS 121
           F+P DT+FVQSGQPSLSLL+FHF PLY SP SL+S A GTKIPTML  +SLTVT+ +SDS
Sbjct: 63  FSPPDTSFVQSGQPSLSLLRFHFLPLYLSPGSLRSFAFGTKIPTMLPSQSLTVTTPQSDS 122

Query: 122 KVSLNGVKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCGPLTFKNPFSEA 181
            +SLN VK+S+SP YDDG L V+GIEKFF+L FQ      SP+ KFRC  LT +NPF EA
Sbjct: 123 VISLNRVKVSSSPFYDDGLLVVYGIEKFFDLKFQ------SPNMKFRCDLLTIRNPFGEA 182

Query: 182 IKTLRSNGYSSMALFLESQIIGFNNGQ-SMMTIFAPSDDALATRIDNFTDYPSLYFRQIL 241
           I+ LRSNGYSSMALFLESQI+GF+NGQ SMMT+FAPSD+AL TR+D FTDYPSLYFRQIL
Sbjct: 183 IEILRSNGYSSMALFLESQILGFSNGQSSMMTVFAPSDEALETRVDKFTDYPSLYFRQIL 242

Query: 242 PCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGLL 301
           PCRI WNDL +LE GTELSTYSEGY +++ KSSGML+INGVAVFYPNMYLNEWLV+HGLL
Sbjct: 243 PCRISWNDLVDLENGTELSTYSEGYTIHVTKSSGMLKINGVAVFYPNMYLNEWLVVHGLL 302

Query: 302 DVFSAAERISAEESDSEM 319
           DVF  AER S  ESDSEM
Sbjct: 303 DVFPVAERTSTVESDSEM 314

[Close]
BLAST of CmoCh04G015400 vs. NCBI nr
Match: gi|225424180|ref|XP_002280452.1| (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Vitis vinifera])

HSP 1 Score: 295.8 bits (756), Expect = 9.1e-77
Identity = 165/326 (50.61%), Postives = 227/326 (69.63%), Query Frame = 1 

Query: 1   MASPLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMT 60
           MA  LL SLI+F LFSLSS LPS T+L+AAEILSD+G+VSM+LTLEL++++LL ++ S T
Sbjct: 1   MAYSLLTSLIIFCLFSLSSSLPSQTILDAAEILSDSGYVSMSLTLELVSQTLLPKSPSAT 60

Query: 61  IFTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSD 120
           +F  SD AF++SGQP LSLLQFH SPL  S ESL+SL +G KIPTM A  SL VTS+ SD
Sbjct: 61  LFAASDAAFIESGQPPLSLLQFHSSPLALSFESLRSLPVGAKIPTMFANHSLIVTSAASD 120

Query: 121 SKVSLNGVKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCGPLTFK----N 180
           S++SLN V I++SPL+DDGSL +FG++KFF+L F    LT SPS    C          +
Sbjct: 121 SQISLNNVNITSSPLFDDGSLIIFGVDKFFDLNFPALGLTRSPSPNTGCTDDAIASSGGD 180

Query: 181 PFSEAIKTLRSNGYSSMALFLESQIIGFNNGQSMMTIFAPSDDALATRIDNFTDY-PSLY 240
            F EA   LRS GY  MA FL+ Q++GF +G + MT+ AP+D+ +  R+ NF+D   S++
Sbjct: 181 SFDEASGVLRSRGYFVMASFLDLQLLGFRDG-TKMTVLAPADEVMMDRVGNFSDISSSIF 240

Query: 241 FRQILPCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLV 300
            R +LPC++ W+DL N ++G+ L T  EG+ + I +S   L++N V+V +P+MY ++WLV
Sbjct: 241 LRHVLPCKVSWSDLVNFDDGSMLPTSLEGFTINITRSGDTLKLNEVSVAFPDMYHSDWLV 300

Query: 301 IHGLLDVFS-AAERISAEESDSEMHG 321
           +HGL +V +       A +S SE  G
Sbjct: 301 VHGLGEVLTLLVGPEQAADSSSETGG 325

[Close]
BLAST of CmoCh04G015400 vs. NCBI nr
Match: gi|1009155114|ref|XP_015895539.1| (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Ziziphus jujuba])

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76
Identity = 163/317 (51.42%), Postives = 220/317 (69.40%), Query Frame = 1 

Query: 1   MASPLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMT 60
           MAS LLVS +L S  S +SPLPS T+L+AAEILSD+GFVSMALTLE+++++L  Q+ S+T
Sbjct: 1   MASSLLVSFLLLSFLSFASPLPSDTILDAAEILSDSGFVSMALTLEIVSQTLTVQSPSLT 60

Query: 61  IFTPSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSD 120
           IF P+D+AF Q+GQPSLSLLQFHF P+    ESLK L+ GTKIPT+L+G SL VTSS S 
Sbjct: 61  IFAPNDSAFSQAGQPSLSLLQFHFCPIPLPLESLKLLSTGTKIPTLLSGHSLIVTSSPSS 120

Query: 121 SKVSLNGVKIS-NSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCGPLTFKNP-- 180
            ++SLN VKI+  SP+YDDGS+ +FGIE FF+  F +P    SP +  RCG  +      
Sbjct: 121 DQISLNNVKITGGSPIYDDGSMIIFGIEDFFDPNFGLPVPISSPRSTPRCGSSSTNGSMD 180

Query: 181 ------FSEAIKTLRSNGYSSMALFLESQIIGFNNGQSMMTIFAPSDDALATRIDNFTDY 240
                 F  A   LRSNG+S MA FL+ Q+ GF    +MMTIFAP D ++   + N    
Sbjct: 181 FPGVSWFEGASAALRSNGHSVMASFLDLQLEGFKE-PTMMTIFAPVDQSMVNPMKNV--- 240

Query: 241 PSLYFRQILPCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLN 300
            S++ R ++PC++LWNDL N ++GT L TYS G+ + + +S  +L +NGV VF+PNMY +
Sbjct: 241 -SVFLRHVVPCKLLWNDLVNFDDGTVLPTYSNGFTITVTRSDSVLMLNGVPVFFPNMYFS 300

Query: 301 EWLVIHGLLDVFSAAER 309
           + LV+HGL +V +  E+
Sbjct: 301 DPLVVHGLNEVLAVQEK 312

[Close]
BLAST of CmoCh04G015400 vs. NCBI nr
Match: gi|571484766|ref|XP_006589647.1| (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Glycine max])

HSP 1 Score: 289.3 bits (739), Expect = 8.6e-75
Identity = 147/308 (47.73%), Postives = 218/308 (70.78%), Query Frame = 1 

Query: 4   PLLVSLILFSLFSLSSPLPSVTVLNAAEILSDNGFVSMALTLELIAESLLSQTNSMTIFT 63
           PLL+ ++ F  FS    LP   + +AA++LSD+G+VSMALTLE++AE+LL Q+ S T+F 
Sbjct: 6   PLLLLILPFIFFSFGRALPREAIFDAADVLSDSGYVSMALTLEIVAETLLEQSPSATVFA 65

Query: 64  PSDTAFVQSGQPSLSLLQFHFSPLYSSPESLKSLALGTKIPTMLAGRSLTVTSSRSDSKV 123
           PSD+AF +SGQPSL LL+FH SPL   P SL+ L  G+KIPTML G++LTVT+S SD   
Sbjct: 66  PSDSAFKKSGQPSLDLLRFHLSPLPLPPASLRLLTAGSKIPTMLPGQTLTVTTSSSDRVT 125

Query: 124 SLNGVKISNSPLYDDGSLAVFGIEKFFNLIFQVPPLTPSPSAKFRCG----PLTFKNPFS 183
           S N +K++ SP+YDDG L V+GI++FF+  FQ     PS ++   C       +  + F 
Sbjct: 126 SFNNIKLTGSPIYDDGILLVYGIDRFFDPTFQFNSQRPSDNSDTSCSAKNHTASASDSFD 185

Query: 184 EAIKTLRSNGYSSMALFLESQIIGFNNGQSMMTIFAPSDDALATRIDNFTDYPSLYFRQI 243
           +AI+TL++ GYS+MA FL  Q+ G  + QS +T+FAP+DD + +RI +F +YPS + R +
Sbjct: 186 QAIQTLKTGGYSAMASFLGMQLSGVAD-QSGITVFAPTDDTVMSRIGDFGEYPSFFRRHV 245

Query: 244 LPCRILWNDLANLEEGTELSTYSEGYELYIAKSSGMLRINGVAVFYPNMYLNEWLVIHGL 303
           +PCR+LWNDL N  +G+EL T+ +G+ + I +S G+L +NGV VF+P+++ N+ +V+HG+
Sbjct: 246 VPCRLLWNDLVNFGDGSELPTFLDGFAINITRSDGVLILNGVPVFFPDVFFNDRVVVHGV 305

Query: 304 LDVFSAAE 308
            DV +A +
Sbjct: 306 SDVLAAQD 312

The following BLAST results are available for this feature:
BLAST of CmoCh04G015400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FLA20_ARATH6.2e-4133.62Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana GN=FL... [more]
BLAST of CmoCh04G015400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUM5_CUCSA7.4e-12675.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611680 PE=4 SV=1[more]
K7LLL3_SOYBN6.0e-7547.73Uncharacterized protein OS=Glycine max GN=GLYMA_10G265700 PE=4 SV=1[more]
M5Y0U7_PRUPE1.7e-7451.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021895mg PE=4 SV=1[more]
W9RD61_9ROSA2.3e-7449.85Uncharacterized protein OS=Morus notabilis GN=L484_025876 PE=4 SV=1[more]
V7BBQ6_PHAVU6.6e-7447.16Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G037300g PE=4 SV=1[more]
BLAST of CmoCh04G015400 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G40940.13.5e-4233.62 putative fasciclin-like arabinogalactan protein 20[more]
BLAST of CmoCh04G015400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708686|ref|XP_004135381.2|1.1e-12575.79PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis sativus][more]
gi|659091712|ref|XP_008446692.1|1.4e-12575.79PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis melo][more]
gi|225424180|ref|XP_002280452.1|9.1e-7750.61PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Vitis vinifera][more]
gi|1009155114|ref|XP_015895539.1|2.0e-7651.42PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Ziziphus jujuba][more]
gi|571484766|ref|XP_006589647.1|8.6e-7547.73PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G015400.1CmoCh04G015400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainGENE3DG3DSA:2.30.180.10coord: 182..302
score: 1.0E-6coord: 30..134
score: 4.
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 48..133
score: 9.
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 212..306
score: 1.1E-4coord: 60..154
score: 0
IPR000782FAS1 domainPROFILEPS50213FAS1coord: 26..154
score: 10
IPR000782FAS1 domainunknownSSF82153FAS1 domaincoord: 23..148
score: 8.24E-10coord: 177..302
score: 4.05
NoneNo IPR availablePANTHERPTHR33985FAMILY NOT NAMEDcoord: 26..308
score: 1.1
NoneNo IPR availablePANTHERPTHR33985:SF4FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 20-RELATEDcoord: 26..308
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G015400Cucsa.280470Cucumber (Gy14) v1cgycmoB0776
CmoCh04G015400Cucsa.283080Cucumber (Gy14) v1cgycmoB0793
CmoCh04G015400CmaCh04G014670Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G015400Cla003916Watermelon (97103) v1cmowmB712
CmoCh04G015400Cla020443Watermelon (97103) v1cmowmB693
CmoCh04G015400Csa5G571500Cucumber (Chinese Long) v2cmocuB729
CmoCh04G015400Csa5G611680Cucumber (Chinese Long) v2cmocuB738
CmoCh04G015400MELO3C005314Melon (DHL92) v3.5.1cmomeB620
CmoCh04G015400MELO3C012299Melon (DHL92) v3.5.1cmomeB631
CmoCh04G015400ClCG01G006130Watermelon (Charleston Gray)cmowcgB642
CmoCh04G015400ClCG05G022230Watermelon (Charleston Gray)cmowcgB654
CmoCh04G015400CSPI05G19700Wild cucumber (PI 183967)cmocpiB737
CmoCh04G015400CSPI05G25810Wild cucumber (PI 183967)cmocpiB745
CmoCh04G015400Lsi09G006490Bottle gourd (USVL1VR-Ls)cmolsiB617
CmoCh04G015400Cp4.1LG09g03340Cucurbita pepo (Zucchini)cmocpeB651
CmoCh04G015400MELO3C012299.2Melon (DHL92) v3.6.1cmomedB720
CmoCh04G015400MELO3C005314.2Melon (DHL92) v3.6.1cmomedB708
CmoCh04G015400CsaV3_5G034890Cucumber (Chinese Long) v3cmocucB0874
CmoCh04G015400CsaV3_5G028530Cucumber (Chinese Long) v3cmocucB0863
CmoCh04G015400Cla97C01G006430Watermelon (97103) v2cmowmbB683
CmoCh04G015400Cla97C05G104000Watermelon (97103) v2cmowmbB729
CmoCh04G015400Bhi07G001042Wax gourdcmowgoB0892
CmoCh04G015400Bhi12G000770Wax gourdcmowgoB0830
CmoCh04G015400CsGy5G025280Cucumber (Gy14) v2cgybcmoB650
CmoCh04G015400CsGy5G019190Cucumber (Gy14) v2cgybcmoB643
CmoCh04G015400Carg01873Silver-seed gourdcarcmoB1138
CmoCh04G015400Carg19026Silver-seed gourdcarcmoB1412
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G015400CmoCh18G009860Cucurbita moschata (Rifu)cmocmoB336
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G015400Cucurbita moschata (Rifu)cmocmoB265
CmoCh04G015400Cucurbita moschata (Rifu)cmocmoB469
CmoCh04G015400Cucurbita maxima (Rimu)cmacmoB312
CmoCh04G015400Cucurbita maxima (Rimu)cmacmoB420
CmoCh04G015400Cucurbita maxima (Rimu)cmacmoB743
CmoCh04G015400Cucurbita pepo (Zucchini)cmocpeB659
CmoCh04G015400Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G015400Bottle gourd (USVL1VR-Ls)cmolsiB660