MELO3C005314.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005314.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Fasciclin-arabinogalactan-like protein
Location	chr09 : 20397223 .. 20398161 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCACTCTCAACCTCGCTTCCCGCTCCTTCCTCCACCATTTCTCCTCCCTCACCATCTTCGCCCCCGCAGACTCCGCCTTCTCCCGCTCTGGCCAACCACCACTCTCTCTTCTCCAGTACCACCTCCTCCCTCACGCCTTCTCTCCCGAAAGTCTTCGCTCTCTCCCCTTAAATGCCAAGATCTCCACAATGCTCCCCAGCCGATTCCTCACCGTCACTAACGACGAAATTCGTATTTCACTCAACAACGTCACCGTCGACACCCCCCCAGTCTACGACGATGGATCTCTCATAATCTTTGGAATCGAGAAATTTTTCAATCCGTTCTTCGAGATCTCTAACTCGAGTAGTAAAAGAATCATACATCCCAATAACGAATGCCGCCGCCGCCGCGATTCTGTAATTGAGAGCAATCCGGTTGAAGCTCTGGCAGCAGCGCTTAGAAACAGAGGGTGGTCGGTAATGGCATCGTTTCTGGATATGCAAATTCTGGGGTTTCATAAAGAACCGGCGGTGACGATATTCGCTCCAACGGACGATTCTTTAATGAATCGCGTAAGTAATTTCTCCGATTGGATGTCGATGTTTCGGCGGCATGTAGTTCCGTGCAAGCTGTGGTGGTCGGATTTGACGAATTTGGGCGGCGGAACGGAAATAAAGACGTATCTGAGAGGGTTTGGAATCAATGTGAAGCGGAGTAATGGGGTTTTGACGCTGAACGACAGGTCGGTTATATATCCTGATATGTTGTATAGTGAAGGAATTGTCGTTCATGGAATTGGGGGAATTCTTGAGATTGAAAAGGAAATGAAGGGAGAAATTGAAGAATCTTCTTCTTCATCAATGGGAAATGGAGGATCTCCAGAAAGTGGGTTTGAAGAGAGTGATAGAGATAAAGCTGTAACACATTACCATTTCTCTGTTATCAGGTGA

mRNA sequence

ATGGCTCTCACTCTCAACCTCGCTTCCCGCTCCTTCCTCCACCATTTCTCCTCCCTCACCATCTTCGCCCCCGCAGACTCCGCCTTCTCCCGCTCTGGCCAACCACCACTCTCTCTTCTCCAGTACCACCTCCTCCCTCACGCCTTCTCTCCCGAAAGTCTTCGCTCTCTCCCCTTAAATGCCAAGATCTCCACAATGCTCCCCAGCCGATTCCTCACCGTCACTAACGACGAAATTCGTATTTCACTCAACAACGTCACCGTCGACACCCCCCCAGTCTACGACGATGGATCTCTCATAATCTTTGGAATCGAGAAATTTTTCAATCCGTTCTTCGAGATCTCTAACTCGAGTAGTAAAAGAATCATACATCCCAATAACGAATGCCGCCGCCGCCGCGATTCTGTAATTGAGAGCAATCCGGTTGAAGCTCTGGCAGCAGCGCTTAGAAACAGAGGGTGGTCGGTAATGGCATCGTTTCTGGATATGCAAATTCTGGGGTTTCATAAAGAACCGGCGGTGACGATATTCGCTCCAACGGACGATTCTTTAATGAATCGCGTAAGTAATTTCTCCGATTGGATGTCGATGTTTCGGCGGCATGTAGTTCCGTGCAAGCTGTGGTGGTCGGATTTGACGAATTTGGGCGGCGGAACGGAAATAAAGACGTATCTGAGAGGGTTTGGAATCAATGTGAAGCGGAGTAATGGGGTTTTGACGCTGAACGACAGGTCGGTTATATATCCTGATATGTTGTATAGTGAAGGAATTGTCGTTCATGGAATTGGGGGAATTCTTGAGATTGAAAAGGAAATGAAGGGAGAAATTGAAGAATCTTCTTCTTCATCAATGGGAAATGGAGGATCTCCAGAAAGTGGGTTTGAAGAGAGTGATAGAGATAAAGCTGTAACACATTACCATTTCTCTGTTATCAGGTGA

Coding sequence (CDS)

ATGGCTCTCACTCTCAACCTCGCTTCCCGCTCCTTCCTCCACCATTTCTCCTCCCTCACCATCTTCGCCCCCGCAGACTCCGCCTTCTCCCGCTCTGGCCAACCACCACTCTCTCTTCTCCAGTACCACCTCCTCCCTCACGCCTTCTCTCCCGAAAGTCTTCGCTCTCTCCCCTTAAATGCCAAGATCTCCACAATGCTCCCCAGCCGATTCCTCACCGTCACTAACGACGAAATTCGTATTTCACTCAACAACGTCACCGTCGACACCCCCCCAGTCTACGACGATGGATCTCTCATAATCTTTGGAATCGAGAAATTTTTCAATCCGTTCTTCGAGATCTCTAACTCGAGTAGTAAAAGAATCATACATCCCAATAACGAATGCCGCCGCCGCCGCGATTCTGTAATTGAGAGCAATCCGGTTGAAGCTCTGGCAGCAGCGCTTAGAAACAGAGGGTGGTCGGTAATGGCATCGTTTCTGGATATGCAAATTCTGGGGTTTCATAAAGAACCGGCGGTGACGATATTCGCTCCAACGGACGATTCTTTAATGAATCGCGTAAGTAATTTCTCCGATTGGATGTCGATGTTTCGGCGGCATGTAGTTCCGTGCAAGCTGTGGTGGTCGGATTTGACGAATTTGGGCGGCGGAACGGAAATAAAGACGTATCTGAGAGGGTTTGGAATCAATGTGAAGCGGAGTAATGGGGTTTTGACGCTGAACGACAGGTCGGTTATATATCCTGATATGTTGTATAGTGAAGGAATTGTCGTTCATGGAATTGGGGGAATTCTTGAGATTGAAAAGGAAATGAAGGGAGAAATTGAAGAATCTTCTTCTTCATCAATGGGAAATGGAGGATCTCCAGAAAGTGGGTTTGAAGAGAGTGATAGAGATAAAGCTGTAACACATTACCATTTCTCTGTTATCAGGTGA

Protein sequence

MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLNAKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSKRIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPTDDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLTLNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRDKAVTHYHFSVIR

Homology

[Close]

BLAST of MELO3C005314.2 vs. NCBI nr
Match: XP_008437696.2 (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis melo])

HSP 1 Score: 621.3 bits (1601), Expect = 1.8e-174
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN
Sbjct: 41  MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 100

Query: 61  AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 120
           AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK
Sbjct: 101 AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 160

Query: 121 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 180
           RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT
Sbjct: 161 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 220

Query: 181 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 240
           DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT
Sbjct: 221 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 280

Query: 241 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 300
           LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD
Sbjct: 281 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 340

Query: 301 KAVTHYHFSVIR 313
           KAVTHYHFSVIR
Sbjct: 341 KAVTHYHFSVIR 352

[Close]

BLAST of MELO3C005314.2 vs. NCBI nr
Match: KGN51507.1 (hypothetical protein Csa_5G571500 [Cucumis sativus])

HSP 1 Score: 562.4 bits (1448), Expect = 9.7e-157
Identity = 283/312 (90.71%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           M+L L+LASRSFLHHFSSLTIFAP DSAFSRSGQPPLSLLQYHLLPHAFS ESLRSLPLN
Sbjct: 79  MSLILDLASRSFLHHFSSLTIFAPPDSAFSRSGQPPLSLLQYHLLPHAFSAESLRSLPLN 138

Query: 61  AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 120
           AKISTMLPSRFLTVTNDE RISLNNVTVD+PPVYDDGSLIIFGIEK FNPFF+ISN+SSK
Sbjct: 139 AKISTMLPSRFLTVTNDETRISLNNVTVDSPPVYDDGSLIIFGIEKLFNPFFDISNASSK 198

Query: 121 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 180
           RI+HP+NECRRR DS IES PVEALAAALRNRGW+VM SFLD+QILGFHKE AVTIFAPT
Sbjct: 199 RIMHPDNECRRRGDSEIESKPVEALAAALRNRGWTVMGSFLDLQILGFHKEAAVTIFAPT 258

Query: 181 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 240
           DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGG EIKTYLRGF INVKRSNGVLT
Sbjct: 259 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGAEIKTYLRGFVINVKRSNGVLT 318

Query: 241 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 300
           LND SVIYPDMLYSEGIVVHGIGGIL+IE EMKGEIEES SSSM NGGSPESGFEE+D D
Sbjct: 319 LNDVSVIYPDMLYSEGIVVHGIGGILDIEMEMKGEIEESPSSSMRNGGSPESGFEENDGD 378

Query: 301 KAVTHYHFSVIR 313
            AVTHYHFSVIR
Sbjct: 379 TAVTHYHFSVIR 390

[Close]

BLAST of MELO3C005314.2 vs. NCBI nr
Match: XP_004150482.2 (PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis sativus])

HSP 1 Score: 562.4 bits (1448), Expect = 9.7e-157
Identity = 283/312 (90.71%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           M+L L+LASRSFLHHFSSLTIFAP DSAFSRSGQPPLSLLQYHLLPHAFS ESLRSLPLN
Sbjct: 41  MSLILDLASRSFLHHFSSLTIFAPPDSAFSRSGQPPLSLLQYHLLPHAFSAESLRSLPLN 100

Query: 61  AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 120
           AKISTMLPSRFLTVTNDE RISLNNVTVD+PPVYDDGSLIIFGIEK FNPFF+ISN+SSK
Sbjct: 101 AKISTMLPSRFLTVTNDETRISLNNVTVDSPPVYDDGSLIIFGIEKLFNPFFDISNASSK 160

Query: 121 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 180
           RI+HP+NECRRR DS IES PVEALAAALRNRGW+VM SFLD+QILGFHKE AVTIFAPT
Sbjct: 161 RIMHPDNECRRRGDSEIESKPVEALAAALRNRGWTVMGSFLDLQILGFHKEAAVTIFAPT 220

Query: 181 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 240
           DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGG EIKTYLRGF INVKRSNGVLT
Sbjct: 221 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGAEIKTYLRGFVINVKRSNGVLT 280

Query: 241 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 300
           LND SVIYPDMLYSEGIVVHGIGGIL+IE EMKGEIEES SSSM NGGSPESGFEE+D D
Sbjct: 281 LNDVSVIYPDMLYSEGIVVHGIGGILDIEMEMKGEIEESPSSSMRNGGSPESGFEENDGD 340

Query: 301 KAVTHYHFSVIR 313
            AVTHYHFSVIR
Sbjct: 341 TAVTHYHFSVIR 352

[Close]

BLAST of MELO3C005314.2 vs. NCBI nr
Match: XP_022152344.1 (putative fasciclin-like arabinogalactan protein 20 [Momordica charantia])

HSP 1 Score: 413.7 bits (1062), Expect = 5.6e-112
Identity = 219/314 (69.75%), Postives = 241/314 (76.75%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           MALTL LAS S L   SSLTIFA  DSAFSRSGQPPLSLLQYHLLPHAFS ESLRSLP  
Sbjct: 43  MALTLELASHSLLQQSSSLTIFAATDSAFSRSGQPPLSLLQYHLLPHAFSLESLRSLPSG 102

Query: 61  AKISTMLPSRFLTVTN--DEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSS 120
           AKISTMLP RFLTVT      RISLNNVTV   PVYDDGSL+IFGIEKFF+PFFE S   
Sbjct: 103 AKISTMLPGRFLTVTTSPSHARISLNNVTVGASPVYDDGSLVIFGIEKFFDPFFESSAVD 162

Query: 121 SKRIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFA 180
           S+RI+ P+ EC     S I+S+PV  LAAALRNRGWSVMASFLD+Q LGFH++PA+T+ A
Sbjct: 163 SRRIVRPDLEC--GDSSSIQSDPVGVLAAALRNRGWSVMASFLDLQFLGFHRQPALTVLA 222

Query: 181 PTDDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGV 240
           PTDDSLMNRVSNF+DW S+FRRHVVPCKL WSDL +   GT + TYL+GF INV RS GV
Sbjct: 223 PTDDSLMNRVSNFTDWRSIFRRHVVPCKLRWSDLADFPDGTRLTTYLKGFNINVNRSGGV 282

Query: 241 LTLNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESD 300
           L LND SVI+PDM YSEGIVVHGIGGILE++ E+K   E SS      G  PES      
Sbjct: 283 LMLNDMSVIFPDMFYSEGIVVHGIGGILEMQNEIKRRAESSSEVPFKTGPPPES------ 342

Query: 301 RDKAVTHYHFSVIR 313
            +KAV HYHFSV R
Sbjct: 343 -EKAVAHYHFSVFR 347

[Close]

BLAST of MELO3C005314.2 vs. NCBI nr
Match: POF08757.1 (putative fasciclin-like arabinogalactan protein 20 [Quercus suber])

HSP 1 Score: 260.4 bits (664), Expect = 7.9e-66
Identity = 148/277 (53.43%), Postives = 188/277 (67.87%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           MALTL LAS + L H  SLTIFAPAD+AF+R GQPPLSL+QYH+LP AFS +SL+SLPL 
Sbjct: 1   MALTLELASHTLLPHSPSLTIFAPADTAFNRLGQPPLSLIQYHILPLAFSFQSLKSLPLG 60

Query: 61  AKISTMLP--SRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSS 120
           AKIST+LP  S  +T ++ +  +SLNNVTV   PVYDDGSLIIFGI+KFFNP+F  S   
Sbjct: 61  AKISTVLPRHSLIVTASSSDDCVSLNNVTVRGQPVYDDGSLIIFGIDKFFNPYFRFSKRF 120

Query: 121 SKRIIHPNNEC----RRRRDSV--IESNPVEALAAALRNRGWSVMASFLDMQILGF-HKE 180
            ++    N EC         SV  + +      +AA+R  G S+MASFLD+Q LG   K 
Sbjct: 121 WRQ--SHNLECLATMPHSESSVASLGAYSFREASAAMRTNGCSIMASFLDIQFLGSQEKA 180

Query: 181 PAVTIFAPTDDSLMNRVSNFSDWM-SMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGI 240
           P +T+FAP ++ +     +FS+++ S F RHVVPC+L W DL NL  GT ++TY  GF I
Sbjct: 181 PMLTVFAPANEVIEGHYGSFSEYVSSFFHRHVVPCRLSWGDLVNLEDGTLLRTYSEGFTI 240

Query: 241 NVKRSNGVLTLNDRSVIYPDMLYSEGIVVHGIGGILE 268
           NV RS G+L LND  VIYPDM +S  +VVHG+  + E
Sbjct: 241 NVTRSLGMLLLNDVPVIYPDMYFSNWLVVHGVVDVFE 275

[Close]

BLAST of MELO3C005314.2 vs. TAIR10
Match: AT5G40940.1 (putative fasciclin-like arabinogalactan protein 20)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-37
Identity = 106/328 (32.32%), Postives = 169/328 (51.52%), Query Frame = 0


Query: 1   MALTLNLASRSF-LHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPL 60
           M LTL LA++   L  +  LT+FAP+D +FS+ GQP L  ++Y L P     E+LR+LP 
Sbjct: 84  MGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPN 143

Query: 61  NAKISTMLPSRFLTVTNDEI---RISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISN 120
            AKI T+  +  LTVTN      + S+NNV V   PV+DDG ++I+G ++FF    +IS+
Sbjct: 144 GAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISD 203

Query: 121 SS----------------------------SKRIIHPNNECRRRRDSVIESNPVEALAAA 180
            S                                         R   V   N  E+ +  
Sbjct: 204 DSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRNLPNRSKPVNRFNIFESASRL 263

Query: 181 LRNRGWSVMASFLDMQILG--FHKEPAVTIFAPTDDSLMNRVSNFSDWMSMFRRHVVPCK 240
           L +RG+ ++A+FL +Q+       +  +T+FAP D+++ N  + FSD++++FR HVV   
Sbjct: 264 LMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQL 323

Query: 241 LWWSDLTNLG-GGTEIKTYLRGFGINVKRSNGVLTLNDRSVIYPDMLYSEGIVVHGIGGI 294
           L W DL      G+ ++T L+G+ I +  S  +L LN   +IYPD+  ++ I VHG   +
Sbjct: 324 LLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQM 383

[Close]

BLAST of MELO3C005314.2 vs. Swiss-Prot
Match: sp|Q9FGW0|FLA20_ARATH (Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=FLA20 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 106/328 (32.32%), Postives = 169/328 (51.52%), Query Frame = 0


Query: 1   MALTLNLASRSF-LHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPL 60
           M LTL LA++   L  +  LT+FAP+D +FS+ GQP L  ++Y L P     E+LR+LP 
Sbjct: 84  MGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPN 143

Query: 61  NAKISTMLPSRFLTVTNDEI---RISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISN 120
            AKI T+  +  LTVTN      + S+NNV V   PV+DDG ++I+G ++FF    +IS+
Sbjct: 144 GAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISD 203

Query: 121 SS----------------------------SKRIIHPNNECRRRRDSVIESNPVEALAAA 180
            S                                         R   V   N  E+ +  
Sbjct: 204 DSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRNLPNRSKPVNRFNIFESASRL 263

Query: 181 LRNRGWSVMASFLDMQILG--FHKEPAVTIFAPTDDSLMNRVSNFSDWMSMFRRHVVPCK 240
           L +RG+ ++A+FL +Q+       +  +T+FAP D+++ N  + FSD++++FR HVV   
Sbjct: 264 LMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQL 323

Query: 241 LWWSDLTNLG-GGTEIKTYLRGFGINVKRSNGVLTLNDRSVIYPDMLYSEGIVVHGIGGI 294
           L W DL      G+ ++T L+G+ I +  S  +L LN   +IYPD+  ++ I VHG   +
Sbjct: 324 LLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQM 383

[Close]

BLAST of MELO3C005314.2 vs. TrEMBL
Match: tr|A0A1S3AV74|A0A1S3AV74_CUCME (putative fasciclin-like arabinogalactan protein 20 OS=Cucumis melo OX=3656 GN=LOC103483040 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 1.2e-174
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN
Sbjct: 41  MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 100

Query: 61  AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 120
           AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK
Sbjct: 101 AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 160

Query: 121 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 180
           RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT
Sbjct: 161 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 220

Query: 181 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 240
           DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT
Sbjct: 221 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 280

Query: 241 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 300
           LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD
Sbjct: 281 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 340

Query: 301 KAVTHYHFSVIR 313
           KAVTHYHFSVIR
Sbjct: 341 KAVTHYHFSVIR 352

[Close]

BLAST of MELO3C005314.2 vs. TrEMBL
Match: tr|A0A0A0KSZ5|A0A0A0KSZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571500 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 6.4e-157
Identity = 283/312 (90.71%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           M+L L+LASRSFLHHFSSLTIFAP DSAFSRSGQPPLSLLQYHLLPHAFS ESLRSLPLN
Sbjct: 79  MSLILDLASRSFLHHFSSLTIFAPPDSAFSRSGQPPLSLLQYHLLPHAFSAESLRSLPLN 138

Query: 61  AKISTMLPSRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSSSK 120
           AKISTMLPSRFLTVTNDE RISLNNVTVD+PPVYDDGSLIIFGIEK FNPFF+ISN+SSK
Sbjct: 139 AKISTMLPSRFLTVTNDETRISLNNVTVDSPPVYDDGSLIIFGIEKLFNPFFDISNASSK 198

Query: 121 RIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIFAPT 180
           RI+HP+NECRRR DS IES PVEALAAALRNRGW+VM SFLD+QILGFHKE AVTIFAPT
Sbjct: 199 RIMHPDNECRRRGDSEIESKPVEALAAALRNRGWTVMGSFLDLQILGFHKEAAVTIFAPT 258

Query: 181 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNGVLT 240
           DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGG EIKTYLRGF INVKRSNGVLT
Sbjct: 259 DDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGAEIKTYLRGFVINVKRSNGVLT 318

Query: 241 LNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMKGEIEESSSSSMGNGGSPESGFEESDRD 300
           LND SVIYPDMLYSEGIVVHGIGGIL+IE EMKGEIEES SSSM NGGSPESGFEE+D D
Sbjct: 319 LNDVSVIYPDMLYSEGIVVHGIGGILDIEMEMKGEIEESPSSSMRNGGSPESGFEENDGD 378

Query: 301 KAVTHYHFSVIR 313
            AVTHYHFSVIR
Sbjct: 379 TAVTHYHFSVIR 390

[Close]

BLAST of MELO3C005314.2 vs. TrEMBL
Match: tr|A0A2N9FCH6|A0A2N9FCH6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16469 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 156/285 (54.74%), Postives = 196/285 (68.77%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           MALTL LAS++ L H  SLTIFAP+DSAF+ SGQPP SL+QYHLLP +FS +SL SLPL 
Sbjct: 40  MALTLELASQTLLPHSPSLTIFAPSDSAFAHSGQPPFSLIQYHLLPISFSFQSLESLPLG 99

Query: 61  AKISTMLPSRFLTVT--NDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSS 120
           AKI+T+LP   LTVT    + R++LNNVTV+  PVYDDGSLIIFGI+KFFNP+F+ S   
Sbjct: 100 AKIATVLPRHLLTVTASPSDYRVALNNVTVEGTPVYDDGSLIIFGIDKFFNPYFQFSQRF 159

Query: 121 SKRIIHPNNECRRRRDSVIESNPV---------EALAAALRNRGWSVMASFLDMQILGFH 180
             +    N EC     S  +SN +            +A LR +G SVMASFLD+Q LG  
Sbjct: 160 WSQ--SHNLECIA---STFQSNALLVSSGAYSFSQASATLRAKGCSVMASFLDIQFLGSQ 219

Query: 181 KEPAVTIFAPTDDSLMNRVSNFSDWM-SMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGF 240
           ++P +T+FAP D+ +  R  NFS+++ S F +HVVPC+L W DL NL  GTE++TY  GF
Sbjct: 220 EKPKLTVFAPVDEVIKIRFGNFSEYLSSFFHQHVVPCRLLWGDLVNLDDGTELRTYSEGF 279

Query: 241 GINVKRSNGVLTLNDRSVIYPDMLYSEGIVVHGIGGILEIEKEMK 274
            INV RS G+L LND  VIYPDM +S  +VVHGI  ILE  + +K
Sbjct: 280 TINVSRSRGMLLLNDVPVIYPDMYFSNWLVVHGIVDILEPPQRIK 319

[Close]

BLAST of MELO3C005314.2 vs. TrEMBL
Match: tr|A0A2P4LTZ7|A0A2P4LTZ7_QUESU (Putative fasciclin-like arabinogalactan protein 20 OS=Quercus suber OX=58331 GN=CFP56_50547 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.2e-66
Identity = 148/277 (53.43%), Postives = 188/277 (67.87%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           MALTL LAS + L H  SLTIFAPAD+AF+R GQPPLSL+QYH+LP AFS +SL+SLPL 
Sbjct: 1   MALTLELASHTLLPHSPSLTIFAPADTAFNRLGQPPLSLIQYHILPLAFSFQSLKSLPLG 60

Query: 61  AKISTMLP--SRFLTVTNDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNSS 120
           AKIST+LP  S  +T ++ +  +SLNNVTV   PVYDDGSLIIFGI+KFFNP+F  S   
Sbjct: 61  AKISTVLPRHSLIVTASSSDDCVSLNNVTVRGQPVYDDGSLIIFGIDKFFNPYFRFSKRF 120

Query: 121 SKRIIHPNNEC----RRRRDSV--IESNPVEALAAALRNRGWSVMASFLDMQILGF-HKE 180
            ++    N EC         SV  + +      +AA+R  G S+MASFLD+Q LG   K 
Sbjct: 121 WRQ--SHNLECLATMPHSESSVASLGAYSFREASAAMRTNGCSIMASFLDIQFLGSQEKA 180

Query: 181 PAVTIFAPTDDSLMNRVSNFSDWM-SMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGI 240
           P +T+FAP ++ +     +FS+++ S F RHVVPC+L W DL NL  GT ++TY  GF I
Sbjct: 181 PMLTVFAPANEVIEGHYGSFSEYVSSFFHRHVVPCRLSWGDLVNLEDGTLLRTYSEGFTI 240

Query: 241 NVKRSNGVLTLNDRSVIYPDMLYSEGIVVHGIGGILE 268
           NV RS G+L LND  VIYPDM +S  +VVHG+  + E
Sbjct: 241 NVTRSLGMLLLNDVPVIYPDMYFSNWLVVHGVVDVFE 275

[Close]

BLAST of MELO3C005314.2 vs. TrEMBL
Match: tr|G7IAT5|G7IAT5_MEDTR (Fasciclin-like arabinogalactan protein OS=Medicago truncatula OX=3880 GN=11423835 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.9e-61
Identity = 120/269 (44.61%), Postives = 175/269 (65.06%), Query Frame = 0


Query: 1   MALTLNLASRSFLHHFSSLTIFAPADSAFSRSGQPPLSLLQYHLLPHAFSPESLRSLPLN 60
           M+LTL + + S L    S T+FAP+DSAF +SGQP L LL++H +      +SLR LP  
Sbjct: 43  MSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPQQSLRRLPAG 102

Query: 61  AKISTMLPSRFLTVT---NDEIRISLNNVTVDTPPVYDDGSLIIFGIEKFFNPFFEISNS 120
           AK+ TML  + LTVT   +D +  S+NN+ ++  P+YDDG L+++GI++FF+P F+ +  
Sbjct: 103 AKLPTMLTGQSLTVTTSFSDRV-TSVNNIKINGTPIYDDGVLLVYGIDRFFDPNFQYTGP 162

Query: 121 SSKRIIHPNNECRRRRDSVIESNPVEALAAALRNRGWSVMASFLDMQILGFHKEPAVTIF 180
           S K   + N+ C     +V  S   E     L+  G+SVMASFL MQ+ G   +  +T+F
Sbjct: 163 SRKPNSYSNSSCSALNRTVNSSGSFEQAVKTLKTSGYSVMASFLGMQLSGNINQNGITVF 222

Query: 181 APTDDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGTEIKTYLRGFGINVKRSNG 240
           APTD+ +MNR+ +F D+ S FRRHVVPCK  W+DL + G GT++ T+L GF IN+ RS G
Sbjct: 223 APTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGDGTQLPTFLEGFSINITRSGG 282

Query: 241 VLTLNDRSVIYPDMLYSEGIVVHGIGGIL 267
           VL LN   V +PD+ +++ +VVHG+  +L
Sbjct: 283 VLILNGVPVFFPDVFFNDRLVVHGVTDVL 310

The following BLAST results are available for this feature:

BLAST of MELO3C005314.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437696.2	1.8e-174	100.00	PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis melo]	[more]
KGN51507.1	9.7e-157	90.71	hypothetical protein Csa_5G571500 [Cucumis sativus]	[more]
XP_004150482.2	9.7e-157	90.71	PREDICTED: putative fasciclin-like arabinogalactan protein 20 [Cucumis sativus]	[more]
XP_022152344.1	5.6e-112	69.75	putative fasciclin-like arabinogalactan protein 20 [Momordica charantia]	[more]
POF08757.1	7.9e-66	53.43	putative fasciclin-like arabinogalactan protein 20 [Quercus suber]	[more]

BLAST of MELO3C005314.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G40940.1	1.4e-37	32.32	putative fasciclin-like arabinogalactan protein 20	[more]

BLAST of MELO3C005314.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FGW0\|FLA20_ARATH	2.6e-36	32.32	Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of MELO3C005314.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AV74\|A0A1S3AV74_CUCME	1.2e-174	100.00	putative fasciclin-like arabinogalactan protein 20 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0KSZ5\|A0A0A0KSZ5_CUCSA	6.4e-157	90.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571500 PE=4 SV=1	[more]
tr\|A0A2N9FCH6\|A0A2N9FCH6_FAGSY	1.7e-72	54.74	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16469 PE=4 SV=1	[more]
tr\|A0A2P4LTZ7\|A0A2P4LTZ7_QUESU	5.2e-66	53.43	Putative fasciclin-like arabinogalactan protein 20 OS=Quercus suber OX=58331 GN=...	[more]
tr\|G7IAT5\|G7IAT5_MEDTR	3.9e-61	44.61	Fasciclin-like arabinogalactan protein OS=Medicago truncatula OX=3880 GN=1142383...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036378	FAS1_dom_sf
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005314.2.1	MELO3C005314.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 20..111 e-value: 1.3E-5 score: 34.6 coord: 175..269 e-value: 4.9E-10 score: 49.3
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 170..265 e-value: 3.5E-6 score: 27.1 coord: 17..106 e-value: 1.1E-4 score: 22.3
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 129..266 score: 10.336
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 1..108 score: 12.219
IPR036378	FAS1 domain superfamily	GENE3D	G3DSA:2.30.180.10		coord: 135..267 e-value: 2.1E-7 score: 33.2
IPR036378	FAS1 domain superfamily	SUPERFAMILY	SSF82153	FAS1 domain	coord: 124..266
IPR036378	FAS1 domain superfamily	SUPERFAMILY	SSF82153	FAS1 domain	coord: 11..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..301
None	No IPR available	PANTHER	PTHR33985	FAMILY NOT NAMED	coord: 1..271
None	No IPR available	PANTHER	PTHR33985:SF2	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 20-RELATED	coord: 1..271

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005314.2	Csa5G611680	Cucumber (Chinese Long) v2	cumedB345
MELO3C005314.2	Csa5G571500	Cucumber (Chinese Long) v2	cumedB329
MELO3C005314.2	CSPI05G25810	Wild cucumber (PI 183967)	cpimedB345
MELO3C005314.2	CSPI05G19700	Wild cucumber (PI 183967)	cpimedB331
MELO3C005314.2	Cucsa.283080	Cucumber (Gy14) v1	cgymedB470
MELO3C005314.2	Cucsa.280470	Cucumber (Gy14) v1	cgymedB463
MELO3C005314.2	CmaCh04G014670	Cucurbita maxima (Rimu)	cmamedB712
MELO3C005314.2	CmoCh04G015400	Cucurbita moschata (Rifu)	cmomedB708
MELO3C005314.2	CmoCh18G009860	Cucurbita moschata (Rifu)	cmomedB393
MELO3C005314.2	Lsi09G006490	Bottle gourd (USVL1VR-Ls)	lsimedB013
MELO3C005314.2	Cp4.1LG09g03340	Cucurbita pepo (Zucchini)	cpemedB023
MELO3C005314.2	CsGy5G025280	Cucumber (Gy14) v2	cgybmedB309
MELO3C005314.2	CsGy5G019190	Cucumber (Gy14) v2	cgybmedB293
MELO3C005314.2	Cla020443	Watermelon (97103) v1	medwmB016
MELO3C005314.2	Cla003916	Watermelon (97103) v1	medwmB029
MELO3C005314.2	ClCG01G006130	Watermelon (Charleston Gray)	medwcgB017
MELO3C005314.2	ClCG05G022230	Watermelon (Charleston Gray)	medwcgB026
MELO3C005314.2	Cla97C01G006430	Watermelon (97103) v2	medwmbB007
MELO3C005314.2	Cla97C05G104000	Watermelon (97103) v2	medwmbB022
MELO3C005314.2	Bhi12G000770	Wax gourd	medwgoB011
MELO3C005314.2	Bhi07G001042	Wax gourd	medwgoB046
MELO3C005314.2	Carg26043	Silver-seed gourd	carmedB0438
MELO3C005314.2	Carg01873	Silver-seed gourd	carmedB0842
MELO3C005314.2	Carg19026	Silver-seed gourd	carmedB1030
MELO3C005314.2	CsaV3_5G034890	Cucumber (Chinese Long) v3	cucmedB357
MELO3C005314.2	CsaV3_5G028530	Cucumber (Chinese Long) v3	cucmedB342

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C005314.2	MELO3C012299.2	Melon (DHL92) v3.6.1	medmedB002

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005314.2	Watermelon (97103) v2	medwmbB016
MELO3C005314.2	Cucurbita maxima (Rimu)	cmamedB293
MELO3C005314.2	Cucurbita maxima (Rimu)	cmamedB723
MELO3C005314.2	Cucurbita moschata (Rifu)	cmomedB279
MELO3C005314.2	Cucurbita moschata (Rifu)	cmomedB716
MELO3C005314.2	Cucurbita pepo (Zucchini)	cpemedB176
MELO3C005314.2	Bottle gourd (USVL1VR-Ls)	lsimedB293
MELO3C005314.2	Silver-seed gourd	carmedB0197