CmoCh04G009580 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G009580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr04 : 4879799 .. 4882711 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACATCAATAAAATTAAAATCAATTTTGAAAATATACTCGTAAAATTTGAAGGAATTTTAATCAACCATCTTGGTTCTTCACTCTTCAGGTAACTTCCAACCGTGTAGCGTTTGCGTGGTTTTCCAGCTTTCAGCTTTCCCTTCAACTTCCATTTCTCTGCCGCGAGCGAGCGAGCGACAGAATTTGTTTTCGAGCTTGCCAGAAACAGATAGACACAGAGATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTACTATTCGTCTCCGGTACTTTCTTCAGATCTCTCTTTCTTGTCCTTTCTGTTAATTTATACTTTGCTTAATTCAATTTTTATTTAGTTTCTATGATCCGTTCTTTGATTTTATGCAAATTCTCGTTTCCTTGTTTTTGCTTGTTCTGTTACTGGAAGCGGTTGAGGTGAACCGAATTGAGAGGGACGCAATTGACTTTGGAAGCCTTTTCTTTTCATGAATTTGTATTCAGATCTCGTTTTTGTTTGATTTTCAATCTCCTTCCATGTTAAATAGTTGAGATCTTTGTTTGTTTATGTTTTCTTAGTTAAAATAATACTTACAGAACTTCATTGTTGTTTGAATGAAATTTGGTTGCTGTATTACGATCTAAGGGGATGTGTGAATCTCAATTTCGCAATGTATAAGCGACCCAAGCAGATGCACGAAGTAGCAGTACTACTTAATCTGTGTGTCTATATATATATATATAATATATAAAGAATCCTTGTCGACATAAAAAACAACTTCTTGTACATGTTTTTATAGGTGTATGAAATTACAAAAACTGTACCAAAAAGCAGCCATGAAGTTTGTTCTTTCAGTGGCTACGCACAATTTTGCTAATTGAGAATGAAAATGAGGAGTTTCAGTTCACCTCTGGCTTCGTTGCTTATTTCCCTTCAAACCCGTACTCATTGTTCATTGCTGAGGGAGATGCAATTATGCATTAGTATTTTACCCGTGTATACTCCAAATCACATGGTTACTCTTATTTTTGTGCATTTTCCATGATCTTTTATCTTGAAATGAATTTTGCTGTCGAATGATAAATTTCTAGACATCAATTAGCCAATATTGAGACATGAATACTATCTTTTGTAGCTATCTCATAACACTTCTTTTGGTTGGCTGCTACAGCCCTTTCTGATGACTCCACTCCCAAAGATGGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGAAGGATATCTGAAATTTACTTCACTGAAGTTGGGTATGTCTTTGAACTCGTCATCCTTTTATTTTTCACCTGAAATAGCTTTATACATATCTGATATGCTGGAGTGGTATTGTCATGTCTTTTAGATGATATGGTTTCTCATGATGAATTCAGTATTAGAAAATCCATCGAACGCCATATGTATGTTTCTATCCATGGCTGCATGACGAGTAATCATTTTTCTTCTCTAATTTATATCTCATTCAGTCTTTTTCTCTATGATGTTGAAATTAAGTTCTTATTATCCTTGGGAGTAACACACTAAATTATAGGAGATTCTCAGTTTTGCTTCTCCATTTCTTGGTTTTGGAACCATTTTACATCCTAAAAGGCTAAAAAGCTCTGTACATATCAACCAACTCCTACTTCCCCTATTTTCTCCTCGCTTCGATTTTTTTTTCTTTGCCAACCCTTCATTGCAATGTTGACTCTTTCATCTTGACTTGAACTTACAAATTACAATTAAAAACTCTTAAACGGGAAGTGGAAAAGCCTGTCATGGTGTTTTAAAAGTAAATAGCTTCCTTAGAGACTATGCTTAAGGTGCTTCGTGGGGCGAGACTATGTAAGACAACATTATATCTATATAAACTTTCAAGTACTATTCATAAAAGAATGTCTATTTTCAGCACTGCCCATAGGAAAGGTATGATGGAGAAGGCAACATGCTAAGCACTGCCATTAGCATTGCAAGACGTTCTACCAATTAGTATCAGTAAAAATGAATCATAATTACAAAATAATAACTAGGAGCTGTTAAAATATTTTATGATACTCCCACGCATTCTAGAAAATACCATATAAGAACATTTCCCATAGAAGATGATATTGCAGCAAAAGCTACTCTAATTATTTACTTGTTCAGTGACTTTATGATTTGATGCACTGGCTGTTGTGTAGCTTGTCAGACCTTTTGAAGCTTTTAGACCTAATATATTCGCTTTTATGCTGTTCTTGCGATTACACTCTATACCCTGACTTGCTTGTTTGTTTTAGACTGTTCTTGCATCTCCATTCAATAGTGAGCTGTCATTTCTTTTTGGGGCCCTCACAAGTTAGGCAGTATATATCAAATGTTTTATCACACCTCAAATGTTCAAAAGGGGCACTTCTCTTGCTTTTGTCTCTCTTTTGTAAAAAAAGCTACATATAATTTTCAGATTCCTGTACCTTATAATTGACAATATTCCTTCATCTGAAATTCTATCACAGGCTTAGAAAACATTATCTTGGAATTGTTGCATGTCAAATGTCTAAAGATCATAAGATGGTAGTTTGCTGTAAGGTTAGTTTTTGTTCTTCTTTTCTACAATTTTATGATGTATTAGTTTATCCAATTGAGGATAAAATGAGTGCTTATAGCATGTAAAATTGATCGAGTTCAGATATGTAAAATTGATGTTACATAACGAGTTTATTAATGAAAGGGTTAAGTTCTCAAATATTTTGTTCTTTCA

mRNA sequence

AACATCAATAAAATTAAAATCAATTTTGAAAATATACTCGTAAAATTTGAAGGAATTTTAATCAACCATCTTGGTTCTTCACTCTTCAGGTAACTTCCAACCGTGTAGCGTTTGCGTGGTTTTCCAGCTTTCAGCTTTCCCTTCAACTTCCATTTCTCTGCCGCGAGCGAGCGAGCGACAGAATTTGTTTTCGAGCTTGCCAGAAACAGATAGACACAGAGATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTACTATTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATGGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGAAGGATATCTGAAATTTACTTCACTGAAGTTGGACTGTTCTTGCATCTCCATTCAATAGTGAGCTGTCATTTCTTTTTGGGGCCCTCACAAGTTAGGCAGTATATATCAAATGTTTTATCACACCTCAAATGTTCAAAAGGGGCACTTCTCTTGCTTTTGTCTCTCTTTTGTAAAAAAAGCTACATATAATTTTCAGATTCCTGTACCTTATAATTGACAATATTCCTTCATCTGAAATTCTATCACAGGCTTAGAAAACATTATCTTGGAATTGTTGCATGTCAAATGTCTAAAGATCATAAGATGGTAGTTTGCTGTAAGGTTAGTTTTTGTTCTTCTTTTCTACAATTTTATGATGTATTAGTTTATCCAATTGAGGATAAAATGAGTGCTTATAGCATGTAAAATTGATCGAGTTCAGATATGTAAAATTGATGTTACATAACGAGTTTATTAATGAAAGGGTTAAGTTCTCAAATATTTTGTTCTTTCA

Coding sequence (CDS)

ATGAGCGCAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTACTATTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATGGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGA

Homology

[Close]

BLAST of CmoCh04G009580 vs. TrEMBL
Match: A0A0A0L5F0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110610 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-35
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 1


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS N S R SDF+SFSA LSLLFVSALSDDS+ KD   SGNHPSSRS+T SM+AIILLG+
Sbjct: 69  MSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILLGI 128

Query: 61  LVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 129 LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 172

[Close]

BLAST of CmoCh04G009580 vs. TrEMBL
Match: A0A022R4U6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016875mg PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-20
Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 1


Query: 14  SFSALLSLLFVSALSDD-STPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKL 73
           +F + +SLL +SA SDD STPK+G K  NH  S+ +T ++I ++L+   V +LSFFLFK+
Sbjct: 15  AFISSISLLLISAYSDDLSTPKNGTKEENHSGSKGSTVALICLLLVA--VTILSFFLFKI 74

Query: 74  WQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           WQKK+REEQYARLLKLFEEDDELE+ELGLRD
Sbjct: 75  WQKKKREEQYARLLKLFEEDDELELELGLRD 103

[Close]

BLAST of CmoCh04G009580 vs. TrEMBL
Match: A0A067DSH9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034055mg PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-20
Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 1


Query: 8   RSSDFISFSALLSLLFVSALSDD-STPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVL- 67
           RS  F+   + + L F+ A+SDD S+ K G +S  H +SR NT + + I+LLGL+ V L 
Sbjct: 8   RSFQFLLLISSICLQFIPAISDDPSSTKKGKQSAAHHTSRGNTGAKVGIVLLGLVAVGLF 67

Query: 68  SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           SFFLFKLWQKK+REEQYARLLKLFEEDDELEVELGLRD
Sbjct: 68  SFFLFKLWQKKKREEQYARLLKLFEEDDELEVELGLRD 105

[Close]

BLAST of CmoCh04G009580 vs. TrEMBL
Match: M1CBL5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024883 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.6e-20
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 8   RSSDFISFSALLSLLFVSALSDDS-TPKDGIKSGNHPSSRSNTSSMIAIILLGLL-VVVL 67
           RS  F+ F    S  F++  SDDS  PK+G K   H +S SNT S + I+ L L+ VV+L
Sbjct: 8   RSISFLLFFLSFSHQFITGFSDDSLNPKNGTKVDTHAASSSNTGSTVLIVCLALVAVVLL 67

Query: 68  SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           SFFLFK WQKK+REEQYARLLKLFEEDDELE+ELGLRD
Sbjct: 68  SFFLFKFWQKKKREEQYARLLKLFEEDDELELELGLRD 105

[Close]

BLAST of CmoCh04G009580 vs. TrEMBL
Match: A0A0V0HHP3_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.6e-20
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 8   RSSDFISFSALLSLLFVSALSDDS-TPKDGIKSGNHPSSRSNTSSMIAIILLGLL-VVVL 67
           RS  F+ F    S  F++  SDDS  PK+G K   H +S SNT S + I+ L L+ VV+L
Sbjct: 8   RSISFLLFFLSFSHQFITGFSDDSLNPKNGTKVDTHAASSSNTGSTVLIVCLALVAVVLL 67

Query: 68  SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           SFFLFK WQKK+REEQYARLLKLFEEDDELE+ELGLRD
Sbjct: 68  SFFLFKFWQKKKREEQYARLLKLFEEDDELELELGLRD 105

[Close]

BLAST of CmoCh04G009580 vs. TAIR10
Match: AT1G09645.1 (AT1G09645.1 unknown protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18
Identity = 53/91 (58.24%), Postives = 68/91 (74.73%), Query Frame = 1


Query: 15  FSALLSLLFVSALSDDSTPKD-GIKSGNHPSSRSNTSSMIAIILLGLLVVVL-SFFLFKL 74
           F A + L F   LS DS   + G+K+ +H SS S T + + ++L+G + V + SFFL+KL
Sbjct: 17  FFASIGLQFFLGLSGDSKNTNAGVKTESHTSS-SKTGTKVILVLVGFVAVAMFSFFLYKL 76

Query: 75  WQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           WQKK+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 77  WQKKKRDEQYARLLKLFEEDDELEVELGLRD 106

[Close]

BLAST of CmoCh04G009580 vs. TAIR10
Match: AT1G57765.2 (AT1G57765.2 unknown protein)

HSP 1 Score: 84.0 bits (206), Expect = 6.1e-17
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1


Query: 19  LSLLFVSAL-----SDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKL 78
           L++L++ ++      D ++   G K+ +H SS S T + +  ILLG   V  LSFFL+KL
Sbjct: 28  LAMLYLDSVYQCISGDPNSSSTGAKAESHTSS-SKTGTKVIFILLGFGAVAGLSFFLYKL 87

Query: 79  WQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           WQKK+R+EQYARLLKLFEEDDELEVELGLRD
Sbjct: 88  WQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

[Close]

BLAST of CmoCh04G009580 vs. TAIR10
Match: AT3G53490.1 (AT3G53490.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 1


Query: 29  DDSTPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKL 88
           +  T K+  K G HP        +I ++LLG++ V L    +K W+KK+R+++ AR LKL
Sbjct: 154 ESGTEKEEQKGGMHPG----IVVLIVVLLLGVVAVGL-LVGYKYWRKKKRQQEQARFLKL 213

Query: 89  FEEDDELEVELGLRD 104
           FE+ D++E ELGL +
Sbjct: 214 FEDGDDIEDELGLEN 223

[Close]

BLAST of CmoCh04G009580 vs. NCBI nr
Match: gi|700201131|gb|KGN56264.1| (hypothetical protein Csa_3G110610 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 4.7e-35
Identity = 88/104 (84.62%), Postives = 93/104 (89.42%), Query Frame = 1


Query: 1   MSANLSRRSSDFISFSALLSLLFVSALSDDSTPKDGIKSGNHPSSRSNTSSMIAIILLGL 60
           MS N S R SDF+SFSA LSLLFVSALSDDS+ KD   SGNHPSSRS+T SM+AIILLG+
Sbjct: 69  MSRNSSPRPSDFLSFSASLSLLFVSALSDDSSKKDSTHSGNHPSSRSSTGSMVAIILLGI 128

Query: 61  LVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Sbjct: 129 LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 172

[Close]

BLAST of CmoCh04G009580 vs. NCBI nr
Match: gi|848879669|ref|XP_012840225.1| (PREDICTED: uncharacterized protein LOC105960581 [Erythranthe guttata])

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-20
Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 1


Query: 14  SFSALLSLLFVSALSDD-STPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKL 73
           +F + +SLL +SA SDD STPK+G K  NH  S+ +T ++I ++L+   V +LSFFLFK+
Sbjct: 15  AFISSISLLLISAYSDDLSTPKNGTKEENHSGSKGSTVALICLLLVA--VTILSFFLFKI 74

Query: 74  WQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           WQKK+REEQYARLLKLFEEDDELE+ELGLRD
Sbjct: 75  WQKKKREEQYARLLKLFEEDDELELELGLRD 103

[Close]

BLAST of CmoCh04G009580 vs. NCBI nr
Match: gi|641821961|gb|KDO41551.1| (hypothetical protein CISIN_1g034055mg [Citrus sinensis])

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-20
Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 1


Query: 8   RSSDFISFSALLSLLFVSALSDD-STPKDGIKSGNHPSSRSNTSSMIAIILLGLLVVVL- 67
           RS  F+   + + L F+ A+SDD S+ K G +S  H +SR NT + + I+LLGL+ V L 
Sbjct: 8   RSFQFLLLISSICLQFIPAISDDPSSTKKGKQSAAHHTSRGNTGAKVGIVLLGLVAVGLF 67

Query: 68  SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           SFFLFKLWQKK+REEQYARLLKLFEEDDELEVELGLRD
Sbjct: 68  SFFLFKLWQKKKREEQYARLLKLFEEDDELEVELGLRD 105

[Close]

BLAST of CmoCh04G009580 vs. NCBI nr
Match: gi|568879173|ref|XP_006492546.1| (PREDICTED: uncharacterized protein LOC102621841 [Citrus sinensis])

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-20
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 8   RSSDFISFSALLSLLFVSALSDDSTP-KDGIKSGNHPSSRSNTSSMIAIILLGLLVVVL- 67
           RS  F+   + + L F+ A+S+DS+  K G +S  H +SRSNT + + IILLGL+ V L 
Sbjct: 8   RSFQFLLLISSICLQFIPAISNDSSSTKKGKQSAAHHTSRSNTGAKVGIILLGLVAVGLF 67

Query: 68  SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           SFFLFKLWQKK+REEQYARLLKLFEEDDELEVELGLRD
Sbjct: 68  SFFLFKLWQKKKREEQYARLLKLFEEDDELEVELGLRD 105

[Close]

BLAST of CmoCh04G009580 vs. NCBI nr
Match: gi|565365213|ref|XP_006349311.1| (PREDICTED: uncharacterized protein LOC102585942 [Solanum tuberosum])

HSP 1 Score: 104.8 bits (260), Expect = 9.4e-20
Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 8   RSSDFISFSALLSLLFVSALSDDS-TPKDGIKSGNHPSSRSNTSSMIAIILLGLL-VVVL 67
           RS  F+ F    S  F++  SDDS  PK+G K   H +S SNT S + I+ L L+ VV+L
Sbjct: 8   RSISFLLFFLSFSHQFITGFSDDSLNPKNGTKVDTHAASSSNTGSTVLIVCLALVAVVLL 67

Query: 68  SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 104
           SFFLFK WQKK+REEQYARLLKLFEEDDELE+ELGLRD
Sbjct: 68  SFFLFKFWQKKKREEQYARLLKLFEEDDELELELGLRD 105

The following BLAST results are available for this feature:

BLAST of CmoCh04G009580 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G009580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5F0_CUCSA	3.3e-35	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110610 PE=4 SV=1	[more]
A0A022R4U6_ERYGU	1.3e-20	63.74	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016875mg PE=4 SV=1	[more]
A0A067DSH9_CITSI	3.0e-20	63.27	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034055mg PE=4 SV=1	[more]
M1CBL5_SOLTU	6.6e-20	62.24	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024883 PE=4 SV=1	[more]
A0A0V0HHP3_SOLCH	6.6e-20	62.24	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of CmoCh04G009580 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09645.1	1.9e-18	58.24	unknown protein	[more]
AT1G57765.2	6.1e-17	56.04	unknown protein	[more]
AT3G53490.1	1.3e-06	40.00	unknown protein	[more]

BLAST of CmoCh04G009580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201131\|gb\|KGN56264.1\|	4.7e-35	84.62	hypothetical protein Csa_3G110610 [Cucumis sativus]	[more]
gi\|848879669\|ref\|XP_012840225.1\|	1.9e-20	63.74	PREDICTED: uncharacterized protein LOC105960581 [Erythranthe guttata]	[more]
gi\|641821961\|gb\|KDO41551.1\|	4.2e-20	63.27	hypothetical protein CISIN_1g034055mg [Citrus sinensis]	[more]
gi\|568879173\|ref\|XP_006492546.1\|	4.2e-20	64.29	PREDICTED: uncharacterized protein LOC102621841 [Citrus sinensis]	[more]
gi\|565365213\|ref\|XP_006349311.1\|	9.4e-20	62.24	PREDICTED: uncharacterized protein LOC102585942 [Solanum tuberosum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0007155	cell adhesion
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005173	stem cell factor receptor binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G009580.1	CmoCh04G009580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33780	FAMILY NOT NAMED	coord: 8..103 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G009580	MELO3C016488	Melon (DHL92) v3.5.1	cmomeB680
CmoCh04G009580	Cp4.1LG01g08610	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G009580	CsaV3_3G006510	Cucumber (Chinese Long) v3	cmocucB0822
CmoCh04G009580	Carg25382	Silver-seed gourd	carcmoB0763
CmoCh04G009580	Carg00009	Silver-seed gourd	carcmoB0923

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G009580	Melon (DHL92) v3.6.1	cmomedB775
CmoCh04G009580	Watermelon (97103) v2	cmowmbB689
CmoCh04G009580	Wax gourd	cmowgoB0819
CmoCh04G009580	Cucurbita moschata (Rifu)	cmocmoB285
CmoCh04G009580	Cucumber (Gy14) v1	cgycmoB0273
CmoCh04G009580	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G009580	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G009580	Wild cucumber (PI 183967)	cmocpiB703
CmoCh04G009580	Cucumber (Chinese Long) v2	cmocuB693
CmoCh04G009580	Watermelon (Charleston Gray)	cmowcgB615
CmoCh04G009580	Watermelon (97103) v1	cmowmB674
CmoCh04G009580	Cucurbita pepo (Zucchini)	cmocpeB667
CmoCh04G009580	Bottle gourd (USVL1VR-Ls)	cmolsiB680
CmoCh04G009580	Cucumber (Gy14) v2	cgybcmoB393