CmoCh04G008420 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGCTGGGGCTGATCAATGCGAACCCTGTGGTTCACGCCAAGAAAGAGCGGATCGCTCGCTCCGAGGATCTCCATGGTGACGACTCCGTTGATCCTCTCGAAATCTATGATATCCTTTTCTCAGTTGTTTGTGTTGTGACCGATTTTGAATTCTTCTTTTATTTTCTTTTTAGGTCAAATTTCAAGCTGAATTCTAATTAGAAAATTAGTTTTTTCGCAAGTTCTTAGTGACCGGATGTATAGTTTTAGCTTATTTTGAGGAAATTGGCTTTTCTCGTTTCTCGTGGAATTTGTTACTTGATAGTGAATTTGCTAACTTATTATCCTTGACTCGAATTTTGACACATTTCGTGAGGGATATTAGAGATCCGGAACATCCGTATTCGTTAGAGCAGCTAAGTGTTCTCTCGGAGGAATCGATCACCGTCGATGACAAGCTAGGGCGTATCCTGTAAGCACAGTCGAAGCAACTCCGCTAATTCTTCCTCATTGATTTTGAGAAACAATTTGAAATGATTGATTTACAATTATATGCTCTAACAGACACATTATCAAGATTCATACTCTAGCAAAGTATCCTAAATCCTTTACTGAATTAGTGTTTATTATATAGGATAACCTTCACTCCGACTATCCAGCATTGTAGCATGGCAACTGTGATTGGTCTCTGTCTGCGGGTGAAACTTAAACATTTTTTTCCCCCAAATTACAAGGTCAGTATACTTTCCTTTCCTTTGAAATAGTCCTGAAATGTTGGGAGTACTGTTTGTTCGATTTCAGTTCTCCACCATACTTGTTGCAATCACCAGATACCGATGAAATTTGTGATTTGTGGCTGGGTATTAAATTAATTTTGGAGAAGTTTGTAGGTTCTTGAAGGAAACGATCATAATAATAGTGTGCTGGCTGTATTTTTAAGATATTGTCTGGGGAATTCTTCGATAAACTGTTTTTTTAATTGTTTTTCTTACTGGATTGTACTTAATCGGTAATCATTTACAAAACTAAGGAAGAACTTAGAGAACAGAAAAATGAACTTTTTCAAAAAAAAAAAAAAAAAAACTACCCACCTATTTTTTTAGATTTTTTTCAATATAAAAAATGAAAACAATTTAGTTTAAAGAATATTTTGGAAACAAATTAATTTAAAAGTTAATTTTGAAAACAATTTCCTGGTGTTCTGTTATTGTAGGCAAACAAACTTCTTTTCTAATTATTTTTAATTTTAAAACTTATTTGGAAAGAATGTCTCTTTATCTTCCTTTTCTTTCAAGTTATACCTTAAAATATTTTTTATGAACAATTAATTTATAAAATATAATGGAAAAATATGCTATACTTACTCCATTTGAATCTTGTCTTCTTGAAATAGCCTTAGGGATTCTAATAGCCTTGAAAATCACAACTCAAACAATTTTGAATCTGGCTCGAGTTTAGGTCGTCCACTAAGTCTGGTTGTGGATTTTGCAGGTTGACATCAAAGTATTTCCAGGATCCCACGCTAATGAAGAATCAGGTAAGATTAAGACATTCTGTTTTAATAGATCAAGGAGAAAAAAATCATGAAATCAAAGATTGAACTTGTTAGAGCCGTGATAGTTAATACTTCTAATTAAGGGACTGTGTTTAATATCCTTTTAGTTACCACTTGCAGATGCTAATGCAGAATGTTTTCATCTTTAAATTTGTCTTTGTTTGGGAAAAAGAACAGTTAATAAGCAACTAAACGATAAAGAAAGAGTGGCAGCGGCAATGGAAAATCCAAATTTGCGTCAGCTTGTAGATGAATGCCTGTATTCCAGCGAGCTCTGAACAAATTATATATCAACGTACAGAGTGGAAAAAGGTAGTCTGTGAATGTAATATAGAAATATTAATATATGTGATTTTATTTACTTCTTTATTGGACCCTTCATCGGCTTCGAGCCTTGGATATTTCAGTTGGTTCTACAAAATATCTCTTCTGTATTGGACCCTTCATCGGCTTCCAGCCTTGGATATTTCAGTTGGTTCTACAAAATATCTCTTCTGTATTGGACCCTTCATCGGCTTCCAGCCTTGGATATTTCAGTTGGTT ATGACGCTGGGGCTGATCAATGCGAACCCTGTGGTTCACGCCAAGAAAGAGCGGATCGCTCGCTCCGAGGATCTCCATGGTGACGACTCCGTTGATCCTCTCGAAATCTATGATATCCTTTTCTCAGTTGTTTGTGTTGTGACCGATTTTGAATTCTTCTTTTATTTTCTTTTTAGTGAATTTGCTAACTTATTATCCTTGACTCGAATTTTGACACATTTCGTGAGGGATATTAGAGATCCGGAACATCCGTATTCGTTAGAGCAGCTAAGTGTTCTCTCGGAGGAATCGATCACCGTCGATGACAAGCTAGGGCGTATCCTGATAACCTTCACTCCGACTATCCAGCATTGTAGCATGGCAACTGTGATTGGTCTCTGTCTGCGGGTGAAACTTAAACATTTTTTTCCCCCAAATTACAAGGTTGACATCAAAGTATTTCCAGGATCCCACGCTAATGAAGAATCAGTTAATAAGCAACTAAACGATAAAGAAAGAGTGGCAGCGGCAATGGAAAATCCAAATTTGCGTCAGCTTGTAGATGAATGCCTGTATTCCAGCGAGCTCTGAACAAATTATATATCAACGTACAGAGTGGAAAAAGGTAGTCTGTGAATGTAATATAGAAATATTAATATATGTGATTTTATTTACTTCTTTATTGGACCCTTCATCGGCTTCGAGCCTTGGATATTTCAGTTGGTTCTACAAAATATCTCTTCTGTATTGGACCCTTCATCGGCTTCCAGCCTTGGATATTTCAGTTGGTTCTACAAAATATCTCTTCTGTATTGGACCCTTCATCGGCTTCCAGCCTTGGATATTTCAGTTGGTT ATGACGCTGGGGCTGATCAATGCGAACCCTGTGGTTCACGCCAAGAAAGAGCGGATCGCTCGCTCCGAGGATCTCCATGGTGACGACTCCGTTGATCCTCTCGAAATCTATGATATCCTTTTCTCAGTTGTTTGTGTTGTGACCGATTTTGAATTCTTCTTTTATTTTCTTTTTAGTGAATTTGCTAACTTATTATCCTTGACTCGAATTTTGACACATTTCGTGAGGGATATTAGAGATCCGGAACATCCGTATTCGTTAGAGCAGCTAAGTGTTCTCTCGGAGGAATCGATCACCGTCGATGACAAGCTAGGGCGTATCCTGATAACCTTCACTCCGACTATCCAGCATTGTAGCATGGCAACTGTGATTGGTCTCTGTCTGCGGGTGAAACTTAAACATTTTTTTCCCCCAAATTACAAGGTTGACATCAAAGTATTTCCAGGATCCCACGCTAATGAAGAATCAGTTAATAAGCAACTAAACGATAAAGAAAGAGTGGCAGCGGCAATGGAAAATCCAAATTTGCGTCAGCTTGTAGATGAATGCCTGTATTCCAGCGAGCTCTGA
BLAST of CmoCh04G008420 vs. Swiss-Prot
Match: AEL1_ARATH (Protein AE7-like 1 OS=Arabidopsis thaliana GN=AEL1 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47 Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 1
BLAST of CmoCh04G008420 vs. Swiss-Prot
Match: AE7_ARATH (Protein AE7 OS=Arabidopsis thaliana GN=AE7 PE=1 SV=2) HSP 1 Score: 162.2 bits (409), Expect = 5.7e-39 Identity = 74/114 (64.91%), Postives = 95/114 (83.33%), Query Frame = 1
BLAST of CmoCh04G008420 vs. Swiss-Prot
Match: U195_CAEEL (MIP18 family protein F45G2.10 OS=Caenorhabditis elegans GN=F45G2.10 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 3.7e-30 Identity = 79/183 (43.17%), Postives = 101/183 (55.19%), Query Frame = 1
BLAST of CmoCh04G008420 vs. Swiss-Prot
Match: U195A_DROME (MIP18 family protein CG7949 OS=Drosophila melanogaster GN=CG7949 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29 Identity = 60/116 (51.72%), Postives = 88/116 (75.86%), Query Frame = 1
BLAST of CmoCh04G008420 vs. Swiss-Prot
Match: FA96A_HUMAN (MIP18 family protein FAM96A OS=Homo sapiens GN=FAM96A PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29 Identity = 61/113 (53.98%), Postives = 88/113 (77.88%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TrEMBL
Match: A0A0B2RUL4_GLYSO (MIP18 family protein OS=Glycine soja GN=glysoja_003251 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 9.1e-76 Identity = 153/192 (79.69%), Postives = 164/192 (85.42%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TrEMBL
Match: I1J8W2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G175900 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.5e-75 Identity = 152/192 (79.17%), Postives = 163/192 (84.90%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TrEMBL
Match: B9S6H7_RICCO (Protein FAM96B, putative OS=Ricinus communis GN=RCOM_0536830 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 6.7e-71 Identity = 147/189 (77.78%), Postives = 155/189 (82.01%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TrEMBL
Match: A0A061DMA5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000392 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 5.9e-67 Identity = 141/190 (74.21%), Postives = 157/190 (82.63%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TrEMBL
Match: U5D7S9_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00059p00038420 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 3.8e-66 Identity = 144/192 (75.00%), Postives = 155/192 (80.73%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TAIR10
Match: AT3G50845.1 (AT3G50845.1 Protein of unknown function (DUF59)) HSP 1 Score: 191.0 bits (484), Expect = 6.5e-49 Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TAIR10
Match: AT1G68310.1 (AT1G68310.1 Protein of unknown function (DUF59)) HSP 1 Score: 168.7 bits (426), Expect = 3.4e-42 Identity = 91/192 (47.40%), Postives = 123/192 (64.06%), Query Frame = 1
BLAST of CmoCh04G008420 vs. TAIR10
Match: AT3G09380.1 (AT3G09380.1 Protein of unknown function (DUF59)) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-30 Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1
BLAST of CmoCh04G008420 vs. NCBI nr
Match: gi|734411742|gb|KHN36128.1| (MIP18 family protein [Glycine soja]) HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75 Identity = 153/192 (79.69%), Postives = 164/192 (85.42%), Query Frame = 1
BLAST of CmoCh04G008420 vs. NCBI nr
Match: gi|947128966|gb|KRH76820.1| (hypothetical protein GLYMA_01G175900 [Glycine max]) HSP 1 Score: 289.3 bits (739), Expect = 5.0e-75 Identity = 152/192 (79.17%), Postives = 163/192 (84.90%), Query Frame = 1
BLAST of CmoCh04G008420 vs. NCBI nr
Match: gi|223539274|gb|EEF40867.1| (Protein FAM96B, putative [Ricinus communis]) HSP 1 Score: 275.0 bits (702), Expect = 9.7e-71 Identity = 147/189 (77.78%), Postives = 155/189 (82.01%), Query Frame = 1
BLAST of CmoCh04G008420 vs. NCBI nr
Match: gi|590703690|ref|XP_007046946.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 261.9 bits (668), Expect = 8.5e-67 Identity = 141/190 (74.21%), Postives = 157/190 (82.63%), Query Frame = 1
BLAST of CmoCh04G008420 vs. NCBI nr
Match: gi|548859869|gb|ERN17477.1| (hypothetical protein AMTR_s00059p00038420 [Amborella trichopoda]) HSP 1 Score: 259.2 bits (661), Expect = 5.5e-66 Identity = 144/192 (75.00%), Postives = 155/192 (80.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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