CmoCh04G007170 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G007170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RAN GTPase 3
Location	Cmo_Chr04 : 3562533 .. 3565212 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAATTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAAGGTTTTCTTTCCTTCTTCTCTTCTCTGGATTTCTCGCCTTCTCTTGCCTTCTCTTGCCTTCTCCTTGGTTTTGCTTCCTGTTCATTTTCGTGTTAGTGGTTTGGTTTCTGGTTGTTGCTTGCTGTTTGAGTGTCCTGATTTCTGGGGTTTAGTTAATTAGCATGTTCCGGTTTGCCGAGTGTGCTGTGTAATGACCTAGATCTGATCGATATAAACTGTGTTTTCTTCTTAATTTTGTGTTCTCATGGTTCAATTGAGTGTTTAATGCTTGCGAAGTTGGTTTTGATGTATTTTTACTGTGATGTTGTGGCTTTGTTCTTCAATTTCTACGGTTGTTTGTGTAATAAAGCTGTTTGGTGATGGTTAGAAAAGTTAGATTCAGCAGGCCTTGAAGAATCCATTTAATAGAAGTTAATGGAATAGTTGGGGACTTGGAATTGTCTGAGCAGATCCTTGTTCACGAAGACTTTGGATTCTGTTTCGTAGATCGTGTGCTTTGAGCCATTTCTATTATAAATCTCTTATAATTTATATTAGCAACAGGAAGCTTTGATTCCTCCCATTATTCTTTCCCTTGTCCCCCGATAAAGCACAAAGGCACTTGGCTTCTTTCTAAAGGAATTCGTTTCCTATCTTCCAAATGGGGAATCAGTTAAAATTTTCTTTCATGTATGGTACCTCCTCTACTTTTTGGTTTCTGTTTATTGCGATGCCTACAAGAGGAAAAAGATCATATGACAAAAGATTTCGTTGCATGTCATTGCAATTTATATAATGTGTTGGGTAAGTAGGGATATTGAACGCATCCAATGGCATTGATTTTCATACCCTATTTTAGGGGCAGCTCGAACTGGTATTACCTAGAAGTAGCTTATAATCTCATACTAAAAAGAGAAACAATGTCATGTTCTGGGATTGTTTCGTCGAGTGTCAAACTTTGTCATAGGTTCTTGGGCTTATATTGTCACTGTTATGAACTTTTATTCCTTCTCAAGTTAGCTCAAGCTCTCCTAAAAACTGGACCTTCTATATATGGATTGCATTTACTCGACTATATGCTTACGGCATGTACTGGTTTCCCCCCAAAAAATGTGTCACTTCATAACAATTATGAATCTGCCCTATCATTCCACAGCACTCTTCCTTCATAAGATTAGCATCTGACAAAGGAAATGAAGTGATCTGCTATTCTTGATGTGCTTTTCATCAACTATAATTTTACTTTTTGTTTTCTCTGTACGTGTAGCCTATGAATGTTGATTAGTAAATTGCAATTCCTGTGGTGGCGTTGAATAGGAAAAGGGTTGTAATTTTTTCCAAATTTTGTTGAGAAGATCTCATCATCGTTCATCAATACAAGTCTCATGGACGGATCTTATGATCTAGTTTACCTTCTTTATGATTCTTTTGTCTATCAATAATGGCATACATTGCATGGTAAATGTGAAGAAGTAGACCATTAACTCGGCAATAATGAGCCAAACTAGTATTTGGAGTGAATCCACCTGTTATTTTTTAGAAAGATTGAATGAGCTGTTCAGATCTGTGTGGCTTTCTGTATGTATAGGTACCGTGCCATCACCAGCGCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAGAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGATAATCTTTCGAAATGATTTTGGATTCTATGTACTGTAATAATTTTTTTTCTTTTGAAGAGAGACGAGAACAAAAAAGAGGAGGTTAAAGGAAAAGGAAGATATCCCCAAGACCTTCAATCTTGCTGTATTACAGAAGAGGAGTAACAGCCACATGATTGTTTTGTGGTTGCTGTTGTGTCCATTTCAAGTTTGGTTTCTACGGTAAATGTCCTCAATTTTAGTTAAAGTTCTTTAAGAATAATTTTTATTTCTAAAAATTTGCTTAAGTTAGGTATGTGATATTCTGCTCTATACATACACTACGAGTGGCTAATGATTTGTTTCTTTAATTGGGTAATCATTTTGCTTCGCTTCAATTTGTAGTTGCTAATTATATATCTTACTACTTGAATTTTACCCAACTTTATTTTGTTTTTCATTCTATTATATATATATATTCATATTCTTAAGTCA

mRNA sequence

ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAATTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAAGGTTTTCTTTCCTTCTTCTCTTCTCTGGATTTCTCGCCTTCTCTTGCCTTCTCTTGCCTTCTCCTTGGTTTTGCTTCCTGTTCATTTTCGTGTACCGTGCCATCACCAGCGCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAGAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGATAATCTTTCGAAATGATTTTGGATTCTATGTACTGTAATAATTTTTTTTCTTTTGAAGAGAGACGAGAACAAAAAAGAGGAGGTTAAAGGAAAAGGAAGATATCCCCAAGACCTTCAATCTTGCTGTATTACAGAAGAGGAGTAACAGCCACATGATTGTTTTGTGGTTGCTGTTGTGTCCATTTCAAGTTTGGTTTCTACGGTAAATGTCCTCAATTTTAGTTAAAGTTCTTTAAGAATAATTTTTATTTCTAAAAATTTGCTTAAGTTAGGTATGTGATATTCTGCTCTATACATACACTACGAGTGGCTAATGATTTGTTTCTTTAATTGGGTAATCATTTTGCTTCGCTTCAATTTGTAGTTGCTAATTATATATCTTACTACTTGAATTTTACCCAACTTTATTTTGTTTTTCATTCTATTATATATATATATTCATATTCTTAAGTCA

Coding sequence (CDS)

ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAATTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAAGGTTTTCTTTCCTTCTTCTCTTCTCTGGATTTCTCGCCTTCTCTTGCCTTCTCTTGCCTTCTCCTTGGTTTTGCTTCCTGTTCATTTTCGTGTACCGTGCCATCACCAGCGCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAGAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAA

Homology

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BLAST of CmoCh04G007170 vs. Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.4e-93
Identity = 186/248 (75.00%), Postives = 199/248 (80.24%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           V+KAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VVKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTR ATFENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL
Sbjct: 121 LVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGL 240
            F+ETSALEA NVE AFAEVLTQIY I SKK VE GE+G+A SVP +GEKI ++ D S L
Sbjct: 181 CFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNA-SVP-KGEKIEVKNDVSAL 216

Query: 241 NRIKCCSS 248
            ++ CCS+
Sbjct: 241 KKLGCCSN 216

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BLAST of CmoCh04G007170 vs. Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.4e-93
Identity = 177/248 (71.37%), Postives = 199/248 (80.24%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           V+KAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VVKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTR ATFEN  RWLKEL++HTD NIVVML+GNKSDLRHLVAVPTEDGKS+AERESL
Sbjct: 121 LVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESG-L 240
           YF+ETSALEA NVE AF EVLTQIY IVSK+AVE G++GS+S +P++G+ IN++++S  L
Sbjct: 181 YFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVL 218

Query: 241 NRIKCCSS 248
            R  CCS+
Sbjct: 241 KRFGCCST 218

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BLAST of CmoCh04G007170 vs. Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.8e-91
Identity = 173/248 (69.76%), Postives = 197/248 (79.44%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++LN+DGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTR  TFE   RWLKEL++HTD NIVVML+GNKSDLRHLV V TEDGK++AE+ESL
Sbjct: 121 LVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESG-L 240
           YF+ETSALEA NVE AF+EVLTQIY IVSK+AVE G+  S S VP+QG+ IN+ ++S  L
Sbjct: 181 YFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVL 218

Query: 241 NRIKCCSS 248
           NR +CCS+
Sbjct: 241 NRYRCCSN 218

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BLAST of CmoCh04G007170 vs. Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.4e-91
Identity = 175/248 (70.56%), Postives = 192/248 (77.42%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRH T+ENV RWLKEL++HTD NIVVML+GNKSDLRHLVAV T++ K  AERE L
Sbjct: 121 LVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEA NVE AF E LTQIY IVSKKAVE G+ G+ SS P +GE INI+DE S  
Sbjct: 181 YFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSW 218

Query: 241 NRIKCCSS 248
            +  CCSS
Sbjct: 241 KKFGCCSS 218

[Close]

BLAST of CmoCh04G007170 vs. Swiss-Prot
Match: RAA1D_ARATH (Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-90
Identity = 175/247 (70.85%), Postives = 200/247 (80.97%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRH+TFENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESL
Sbjct: 121 LVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLN 240
           YF+ETSALE+ NVE AF+EVLTQIYH+VSKKA+E GE+  + +VP++GEKI++ D S + 
Sbjct: 181 YFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV-DVSAVK 214

Query: 241 RIKCCSS 248
           +  CCS+
Sbjct: 241 KTGCCSN 214

[Close]

BLAST of CmoCh04G007170 vs. TrEMBL
Match: A0A0A0KXK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-111
Identity = 215/247 (87.04%), Postives = 217/247 (87.85%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLN 240
           YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLN
Sbjct: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLN 217

Query: 241 RIKCCSS 248
           RIKCCSS
Sbjct: 241 RIKCCSS 217

[Close]

BLAST of CmoCh04G007170 vs. TrEMBL
Match: M5X2E3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.2e-101
Identity = 201/248 (81.05%), Postives = 209/248 (84.27%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHTDSNIVVMLVGNKSDLRHLVAV TEDGKSYAE+ESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSDLRHLVAVSTEDGKSYAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEA NVE +FAEVLTQIYHIVSKKAVEGGENG+A SVPA GEKINI+D+ S L
Sbjct: 181 YFMETSALEAKNVENSFAEVLTQIYHIVSKKAVEGGENGTA-SVPATGEKINIKDDVSAL 217

Query: 241 NRIKCCSS 248
            R+ CCSS
Sbjct: 241 KRVGCCSS 217

[Close]

BLAST of CmoCh04G007170 vs. TrEMBL
Match: A5BUD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035368 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 9.0e-100
Identity = 194/247 (78.54%), Postives = 207/247 (83.81%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHTD NIVVMLVGNKSDLRHLVAV TEDGK+YAERESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLVAVSTEDGKTYAERESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEA NVE AFAEVLTQIY IVSKK+VEGG+ G+ASSVPA+GE+IN++D+ S L
Sbjct: 181 YFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEGAASSVPAKGERINVKDDASAL 217

Query: 241 NRIKCCS 247
            R+ CCS
Sbjct: 241 KRVGCCS 217

[Close]

BLAST of CmoCh04G007170 vs. TrEMBL
Match: F6H2M2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01160 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 9.0e-100
Identity = 194/247 (78.54%), Postives = 207/247 (83.81%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 35  MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 94

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 95  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 154

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHTD NIVVMLVGNKSDLRHLVAV TEDGK+YAERESL
Sbjct: 155 LVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLVAVSTEDGKTYAERESL 214

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEA NVE AFAEVLTQIY IVSKK+VEGG+ G+ASSVPA+GE+IN++D+ S L
Sbjct: 215 YFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEGAASSVPAKGERINVKDDASAL 251

Query: 241 NRIKCCS 247
            R+ CCS
Sbjct: 275 KRVGCCS 251

[Close]

BLAST of CmoCh04G007170 vs. TrEMBL
Match: Q7DLK8_VICFA (Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.0e-98
Identity = 196/248 (79.03%), Postives = 206/248 (83.06%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHTDSNIVVMLVGNK+DLRHLVAV TEDGKSYAE+ESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADLRHLVAVSTEDGKSYAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGL 240
           YF+ETSALEA NVE AFAEVLTQIYHIVSKK VEG ENG+A SVPA+GEKI+++ D S L
Sbjct: 181 YFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAENGNA-SVPAKGEKIDLKNDVSAL 217

Query: 241 NRIKCCSS 248
            R+ CCSS
Sbjct: 241 KRVGCCSS 217

[Close]

BLAST of CmoCh04G007170 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B)

HSP 1 Score: 344.0 bits (881), Expect = 7.8e-95
Identity = 186/248 (75.00%), Postives = 199/248 (80.24%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           V+KAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VVKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTR ATFENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL
Sbjct: 121 LVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGL 240
            F+ETSALEA NVE AFAEVLTQIY I SKK VE GE+G+A SVP +GEKI ++ D S L
Sbjct: 181 CFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNA-SVP-KGEKIEVKNDVSAL 216

Query: 241 NRIKCCSS 248
            ++ CCS+
Sbjct: 241 KKLGCCSN 216

[Close]

BLAST of CmoCh04G007170 vs. TAIR10
Match: AT4G18800.1 (AT4G18800.1 RAB GTPase homolog A1D)

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-91
Identity = 175/247 (70.85%), Postives = 200/247 (80.97%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRH+TFENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESL
Sbjct: 121 LVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLN 240
           YF+ETSALE+ NVE AF+EVLTQIYH+VSKKA+E GE+  + +VP++GEKI++ D S + 
Sbjct: 181 YFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGED--SGNVPSKGEKIDV-DVSAVK 214

Query: 241 RIKCCSS 248
           +  CCS+
Sbjct: 241 KTGCCSN 214

[Close]

BLAST of CmoCh04G007170 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C)

HSP 1 Score: 332.4 bits (851), Expect = 2.4e-91
Identity = 177/248 (71.37%), Postives = 199/248 (80.24%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRH+TFENV+ WLKEL+NHTD NIVVMLVGNKSDLRHLVAV TED KS+AE+ESL
Sbjct: 121 LVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI-RDESGL 240
           YF+ETSALEA NVE AFAEVLTQI+HIVSKKA+E      +++VP++G+KI+I +D S +
Sbjct: 181 YFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAA--SESANVPSKGDKIDIGKDVSAV 216

Query: 241 NRIKCCSS 248
            +  CCS+
Sbjct: 241 KKGGCCSN 216

[Close]

BLAST of CmoCh04G007170 vs. TAIR10
Match: AT1G06400.1 (AT1G06400.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 321.2 bits (822), Expect = 5.4e-88
Identity = 167/248 (67.34%), Postives = 194/248 (78.23%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           V+KAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VVKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           L+YDVTRHATFEN  RWL+EL+ HTD NIVVML+GNK DLRHLVAV TE+ K++AERESL
Sbjct: 121 LIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIR-DESGL 240
           YF+ETSAL+A NVE AF EVLTQI+ IVSK++V+GG  G ++ +P +GE IN++ D S L
Sbjct: 181 YFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVL 216

Query: 241 NRIKCCSS 248
            R+ CCS+
Sbjct: 241 KRMGCCSN 216

[Close]

BLAST of CmoCh04G007170 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-82
Identity = 157/250 (62.80%), Postives = 193/250 (77.20%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MA YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           ++KAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  IVKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRH TFENV+RWLKEL++HTD+NIV+M VGNK+DLRHL AV TED K++AERE+ 
Sbjct: 121 LVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENT 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINI---RDES 240
           +F+ETSALE++NVE AF EVL+QIY +VS+KA++ G++ +A     +G+ IN+    D S
Sbjct: 181 FFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAAL---PKGQTINVGSKDDVS 217

Query: 241 GLNRIKCCSS 248
            + ++ CCS+
Sbjct: 241 AVKKVGCCSN 217

[Close]

BLAST of CmoCh04G007170 vs. NCBI nr
Match: gi|449438915|ref|XP_004137233.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 1.9e-111
Identity = 215/247 (87.04%), Postives = 217/247 (87.85%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLN 240
           YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLN
Sbjct: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLN 217

Query: 241 RIKCCSS 248
           RIKCCSS
Sbjct: 241 RIKCCSS 217

[Close]

BLAST of CmoCh04G007170 vs. NCBI nr
Match: gi|659101717|ref|XP_008451755.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 4.3e-111
Identity = 214/247 (86.64%), Postives = 217/247 (87.85%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDESGLN 240
           YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAS+VPAQGEKINI+DESGLN
Sbjct: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASAVPAQGEKINIKDESGLN 217

Query: 241 RIKCCSS 248
           R+KCCSS
Sbjct: 241 RMKCCSS 217

[Close]

BLAST of CmoCh04G007170 vs. NCBI nr
Match: gi|470115898|ref|XP_004294128.1| (PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca])

HSP 1 Score: 382.5 bits (981), Expect = 5.6e-103
Identity = 202/248 (81.45%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHTDSNIVVMLVGNKSDLRHLVAV TEDGKSYAE+ESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSDLRHLVAVSTEDGKSYAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEAVNVE AFAEVLTQIYHIVSKKAVE GENG+ASSVPA+GEKINI+D+ S L
Sbjct: 181 YFMETSALEAVNVENAFAEVLTQIYHIVSKKAVEAGENGTASSVPAKGEKINIKDDVSAL 218

Query: 241 NRIKCCSS 248
            R+ CCSS
Sbjct: 241 KRVGCCSS 218

[Close]

BLAST of CmoCh04G007170 vs. NCBI nr
Match: gi|1009161879|ref|XP_015899132.1| (PREDICTED: ras-related protein RABA1b [Ziziphus jujuba])

HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102
Identity = 200/248 (80.65%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHT+SNIVVMLVGNKSDLRHLVAV TEDGKSYAE+ESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELRNHTESNIVVMLVGNKSDLRHLVAVSTEDGKSYAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEA NVE AFAEVLTQIYHIVSKKAVEGGENG+ SSVP++GEKINI+D+ S L
Sbjct: 181 YFMETSALEATNVENAFAEVLTQIYHIVSKKAVEGGENGTDSSVPSKGEKINIKDDVSAL 218

Query: 241 NRIKCCSS 248
            R+ CCSS
Sbjct: 241 KRVGCCSS 218

[Close]

BLAST of CmoCh04G007170 vs. NCBI nr
Match: gi|595872726|ref|XP_007212036.1| (hypothetical protein PRUPE_ppa011259mg [Prunus persica])

HSP 1 Score: 376.7 bits (966), Expect = 3.1e-101
Identity = 201/248 (81.05%), Postives = 209/248 (84.27%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERFSFLLLFSGFLAFSCLLLPSPWFCFLFIFVYRAITSAYYRGAVGAL 120
           VIKAQIWDTAGQER                              YRAITSAYYRGAVGAL
Sbjct: 61  VIKAQIWDTAGQER------------------------------YRAITSAYYRGAVGAL 120

Query: 121 LVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESL 180
           LVYDVTRHATFENVDRWLKEL+NHTDSNIVVMLVGNKSDLRHLVAV TEDGKSYAE+ESL
Sbjct: 121 LVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSDLRHLVAVSTEDGKSYAEKESL 180

Query: 181 YFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIRDE-SGL 240
           YF+ETSALEA NVE +FAEVLTQIYHIVSKKAVEGGENG+A SVPA GEKINI+D+ S L
Sbjct: 181 YFMETSALEAKNVENSFAEVLTQIYHIVSKKAVEGGENGTA-SVPATGEKINIKDDVSAL 217

Query: 241 NRIKCCSS 248
            R+ CCSS
Sbjct: 241 KRVGCCSS 217

The following BLAST results are available for this feature:

BLAST of CmoCh04G007170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA1B_ARATH	1.4e-93	75.00	Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1	[more]
RB11D_LOTJA	1.4e-93	71.37	Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1	[more]
RB11E_LOTJA	3.8e-91	69.76	Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1	[more]
YPT3_NICPL	6.4e-91	70.56	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1	[more]
RAA1D_ARATH	1.9e-90	70.85	Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2 SV=1	[more]

BLAST of CmoCh04G007170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK6_CUCSA	1.3e-111	87.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1	[more]
M5X2E3_PRUPE	2.2e-101	81.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1	[more]
A5BUD1_VITVI	9.0e-100	78.54	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035368 PE=4 SV=1	[more]
F6H2M2_VITVI	9.0e-100	78.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01160 PE=4 SV=...	[more]
Q7DLK8_VICFA	1.0e-98	79.03	Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1	[more]

BLAST of CmoCh04G007170 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16920.1	7.8e-95	75.00	RAB GTPase homolog A1B	[more]
AT4G18800.1	1.1e-91	70.85	RAB GTPase homolog A1D	[more]
AT5G45750.1	2.4e-91	71.37	RAB GTPase homolog A1C	[more]
AT1G06400.1	5.4e-88	67.34	Ras-related small GTP-binding family protein	[more]
AT5G60860.1	1.5e-82	62.80	RAB GTPase homolog A1F	[more]

BLAST of CmoCh04G007170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438915\|ref\|XP_004137233.1\|	1.9e-111	87.04	PREDICTED: ras-related protein RABA1b-like [Cucumis sativus]	[more]
gi\|659101717\|ref\|XP_008451755.1\|	4.3e-111	86.64	PREDICTED: ras-related protein RABA1b-like [Cucumis melo]	[more]
gi\|470115898\|ref\|XP_004294128.1\|	5.6e-103	81.45	PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca]	[more]
gi\|1009161879\|ref\|XP_015899132.1\|	2.1e-102	80.65	PREDICTED: ras-related protein RABA1b [Ziziphus jujuba]	[more]
gi\|595872726\|ref\|XP_007212036.1\|	3.1e-101	81.05	hypothetical protein PRUPE_ppa011259mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G007170.1	CmoCh04G007170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 105..205 score: 3.5E-30coord: 15..78 score: 2.2
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..77 score: 3.1E-19coord: 105..200 score: 2.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..230 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 105..210 score: 2.46E-56coord: 9..74 score: 2.46
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 37..53 score: 2.9E-34coord: 182..204 score: 2.9E-34coord: 14..35 score: 2.9E-34coord: 55..77 score: 2.9
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 106..247 score: 2.0E-159coord: 5..75 score: 2.0E
None	No IPR available	PANTHER	PTHR24073:SF432	RAS-RELATED PROTEIN RABA1C-RELATED	coord: 5..75 score: 2.0E-159coord: 106..247 score: 2.0E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..207 score: 1.7
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..203 score: 9.
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..207 score: 2.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..242 score: 0.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..245 score: 33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G007170	Cucsa.273710	Cucumber (Gy14) v1	cgycmoB0756
CmoCh04G007170	CmaCh16G004340	Cucurbita maxima (Rimu)	cmacmoB339
CmoCh04G007170	CmaCh04G006710	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G007170	Cla005375	Watermelon (97103) v1	cmowmB681
CmoCh04G007170	Csa4G082460	Cucumber (Chinese Long) v2	cmocuB712
CmoCh04G007170	MELO3C016125	Melon (DHL92) v3.5.1	cmomeB691
CmoCh04G007170	ClCG07G010230	Watermelon (Charleston Gray)	cmowcgB674
CmoCh04G007170	Lsi07G008850	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G007170	Cp4.1LG14g03580	Cucurbita pepo (Zucchini)	cmocpeB669
CmoCh04G007170	Cp4.1LG01g00710	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G007170	MELO3C016125.2	Melon (DHL92) v3.6.1	cmomedB785
CmoCh04G007170	CsaV3_4G008100	Cucumber (Chinese Long) v3	cmocucB0842
CmoCh04G007170	Cla97C07G136910	Watermelon (97103) v2	cmowmbB752
CmoCh04G007170	Bhi01G002484	Wax gourd	cmowgoB0855
CmoCh04G007170	CsGy4G007750	Cucumber (Gy14) v2	cgybcmoB529
CmoCh04G007170	Carg11366	Silver-seed gourd	carcmoB0901
CmoCh04G007170	Carg13085	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G007170	CmoCh16G004690	Cucurbita moschata (Rifu)	cmocmoB287

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G007170	Wax gourd	cmowgoB0844