CmaCh04G006710 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTTTTCTTTTCATCTCCATTTCTTCCCACCTTTATTGATTTCACACACTTCCTCCCCCACTTGAGTACTGCATTTCTTCGATTTTTCCTCTCTCCTCCTCTCTGCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTTAATCTATAAAGTTTTGAGGTAAATCGAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAAGGTTTTCTTTCCTTCTTCTCTTCTCTGGATTTCTCGCCTTCTCCTTGGTTTTGCTTCCTGTTCATTTGCGTGTTAGTGGTTTGGTTTCTGGTTGTTGCTTGCTGTTTGAGTGTCCTGATTTCTGTGGTTTAGTTAATTAGCATGTTCCGGTTTGCCGAGTGTGTTGTGTAATAACCTAGATCTGATCGATATAAACTGTGTTTTCTTCTTAATTTTGTGTTCTTATGGTTCAATTGAGTGTTTAATGCTTGCGAAGTTGGTTTTGATGTATTTTTACTGTGATGTTGTGGCTTTGTTCTTCAATTTCTACGGTTGTTTGTGTAATAAAGCTGTTTGGTGATGGTTAGAAAAGTTAGATTCAGCAGGCCTTGAAGAATCCATTTAATAGAAGTTAATGGAATAGTTGGGGACTTGGAATTGTCTGAGCAGATCCTTGTTCGCGAAGACTTTGGATTCTGTTTCGTAGATCGTGTGCTTTGAGCCATTTCTATTATAAATCTCTTATAATTTATATTAGCAACAGGAAGCTTTGATTCCTCCCATTATTCTTTCCCTTGTCCCCCGATAAAGCACAAAGGCACTTGGCTTCTTTCTAAAGGAATTCGTTTCCTATTTTCCAAATGGGGAATCGGTTAAAATTTTCTTTCATGTATGGTACCTCCTCTACTTTTTGGTTTCTGTTTATTGCGATGCCTACAAGAGGAAAAAGATCATATGACAAAGATTTCGTTGCATGTCATTGAAATTTATATAATGTGTTGGGCAAGTAGGGATATTGAACGCATCTAGTGGCATTGATTTTCATACCCTATTTTAGGGGAAGCTCGAACTGGTATTACCTAGAAGTAGCTTATAATCTCCTACTAAAAAGAGAAACAATGTCATGTGCTGGGATAGTTTCGTCGAGTGTCCAACTTTGTCATAGGTTCTTGGGCTTATATTGTCACTGTTATGAACTTTTATTCCTTCTCAAGTTAGCTCAAGCTCTCCTAAAAACTGGACCTTCTATATATGGAGTGCATCTACTCGACTATATGCTTACGGCATGTACTGGTTTTCCCTGAAAAAATGTGTCACTTCATAACAATTATGTATCTGCCCTATGATTCCACAGCACTCTTCCTTCATAAGATTAGCATCTGACAAAGTAAATGAAGTGATCTGCTATTCTTGATGTGCTTTTCATTAACTATAATTTTACCTTTTGTTTTCTCTGTACGTGTAGCCTATGAATGTTGATTAGTAAATTGCAATTCCTGTGGTGATGTTGAATAGGAAAAGGGGTTGTAATTTTTTCCAAATTTTGTTGAGAAGATCTCATCATCGTTCATCAATAAAACTCTGATGGACGGATCTTATGATCGTGTCTATCAATAATGGCATAAATTGCACGGTAAATGTGAAGAAGTAGGCCATTAACTCGGCAATAATAAGCCAAACTAGTATTTGCAGAGAATCCACCTGTTATTTTTCAGAAAAATTGAATGAGCTGTTCAGATCTGTGTGGCTTTCTGTGTGTTAGGTACCGTGCCATCACCAGCGCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGATAATCTTTCGAAATGATTTTGGATTCTATGTACTGTAATAATTTTTTTTCTTTTGAAGAGAGACGAGAACAAAAAAGAGGAGGTTAAAGGAAAAGGAAGATATCCCCAAGACCTTCAATCTTGCTGTATTACAGAGGAGTAACAGCCACATGATTGTTTTGTGGTTGCTGTTGTGTCCATTTTAGCTTCTACCAAAAAAAAATCCTGGTTTCAAGTTTGGTTTCTACGGTAAATGTCCTCAATTTTAGTTAAAGTTCTTTAAGAATAATTTTTATTTCTAAAAATTTGCTTAAATTAGGTATGTGATATTCTGCTCTATACATAAACTACGAGTGGCTAATGATTTGTTTCTTTAATTGGGTAATCATTTTGCTTCACTTCAATTTGTAGTTGCTGATTAGATATCTTACTACTTGAATTTTAC CCTTTTTTCTTTTCATCTCCATTTCTTCCCACCTTTATTGATTTCACACACTTCCTCCCCCACTTGAGTACTGCATTTCTTCGATTTTTCCTCTCTCCTCCTCTCTGCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTTAATCTATAAAGTTTTGAGGTAAATCGAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGCGCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGATAATCTTTCGAAATGATTTTGGATTCTATGTACTGTAATAATTTTTTTTCTTTTGAAGAGAGACGAGAACAAAAAAGAGGAGGTTAAAGGAAAAGGAAGATATCCCCAAGACCTTCAATCTTGCTGTATTACAGAGGAGTAACAGCCACATGATTGTTTTGTGGTTGCTGTTGTGTCCATTTTAGCTTCTACCAAAAAAAAATCCTGGTTTCAAGTTTGGTTTCTACGGTAAATGTCCTCAATTTTAGTTAAAGTTCTTTAAGAATAATTTTTATTTCTAAAAATTTGCTTAAATTAGGTATGTGATATTCTGCTCTATACATAAACTACGAGTGGCTAATGATTTGTTTCTTTAATTGGGTAATCATTTTGCTTCACTTCAATTTGTAGTTGCTGATTAGATATCTTACTACTTGAATTTTAC ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGTGTCGGCAAGTCCAATTTGCTCTCCAGATTCACTAAGAACGAGTTCAACCTCGAGTCTAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGATACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGCGCATACTATCGTGGAGCAGTTGGTGCACTCCTTGTATACGATGTTACTCGTCATGCAACATTTGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATTGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTGGCTGTTCCAACCGAGGATGGAAAGTCGTACGCTGAGAGGGAATCACTGTACTTCATAGAAACCTCTGCACTGGAAGCAGTCAACGTCGAAAAAGCATTCGCCGAGGTCCTGACTCAGATCTATCACATAGTAAGCAAGAAGGCTGTTGAAGGTGGAGAAAACGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAA MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS
BLAST of CmaCh04G006710 vs. Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 2.1e-98 Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of CmaCh04G006710 vs. Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 2.1e-98 Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of CmaCh04G006710 vs. Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.0e-95 Identity = 176/218 (80.73%), Postives = 192/218 (88.07%), Query Frame = 1
BLAST of CmaCh04G006710 vs. Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.3e-95 Identity = 174/218 (79.82%), Postives = 197/218 (90.37%), Query Frame = 1
BLAST of CmaCh04G006710 vs. Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 348.2 bits (892), Expect = 6.5e-95 Identity = 176/216 (81.48%), Postives = 199/216 (92.13%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TrEMBL
Match: A0A0A0KXK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-116 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TrEMBL
Match: M5X2E3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 3.3e-106 Identity = 202/218 (92.66%), Postives = 209/218 (95.87%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TrEMBL
Match: F6H2M2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01160 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-104 Identity = 195/217 (89.86%), Postives = 207/217 (95.39%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TrEMBL
Match: A5BUD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035368 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-104 Identity = 195/217 (89.86%), Postives = 207/217 (95.39%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TrEMBL
Match: Q08150_PEA (GTP-binding protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.5e-103 Identity = 197/218 (90.37%), Postives = 206/218 (94.50%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B) HSP 1 Score: 359.8 bits (922), Expect = 1.2e-99 Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TAIR10
Match: AT4G18800.1 (AT4G18800.1 RAB GTPase homolog A1D) HSP 1 Score: 348.2 bits (892), Expect = 3.6e-96 Identity = 175/217 (80.65%), Postives = 200/217 (92.17%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C) HSP 1 Score: 348.2 bits (892), Expect = 3.6e-96 Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TAIR10
Match: AT1G06400.1 (AT1G06400.1 Ras-related small GTP-binding family protein) HSP 1 Score: 337.0 bits (863), Expect = 8.4e-93 Identity = 168/218 (77.06%), Postives = 194/218 (88.99%), Query Frame = 1
BLAST of CmaCh04G006710 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F) HSP 1 Score: 318.2 bits (814), Expect = 4.0e-87 Identity = 157/220 (71.36%), Postives = 193/220 (87.73%), Query Frame = 1
BLAST of CmaCh04G006710 vs. NCBI nr
Match: gi|449438915|ref|XP_004137233.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis sativus]) HSP 1 Score: 426.4 bits (1095), Expect = 3.0e-116 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 1
BLAST of CmaCh04G006710 vs. NCBI nr
Match: gi|659101717|ref|XP_008451755.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 6.6e-116 Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 1
BLAST of CmaCh04G006710 vs. NCBI nr
Match: gi|470115898|ref|XP_004294128.1| (PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca]) HSP 1 Score: 398.3 bits (1022), Expect = 8.7e-108 Identity = 203/218 (93.12%), Postives = 210/218 (96.33%), Query Frame = 1
BLAST of CmaCh04G006710 vs. NCBI nr
Match: gi|1009161879|ref|XP_015899132.1| (PREDICTED: ras-related protein RABA1b [Ziziphus jujuba]) HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-107 Identity = 201/218 (92.20%), Postives = 210/218 (96.33%), Query Frame = 1
BLAST of CmaCh04G006710 vs. NCBI nr
Match: gi|595872726|ref|XP_007212036.1| (hypothetical protein PRUPE_ppa011259mg [Prunus persica]) HSP 1 Score: 392.5 bits (1007), Expect = 4.8e-106 Identity = 202/218 (92.66%), Postives = 209/218 (95.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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