CmaCh16G004340 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G004340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAN GTPase 3
Location	Cma_Chr16 : 2165009 .. 2170144 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCACGCACTTCCTCCCACTTGATTTTCTCTCTCTCTCTCTCTGGTTCGATTCTTCTTCTTCTTCCTCGTAAAGTTTGAAGTAAATCGAAGCAACAATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACTTTGAAGGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTTTTCTTTCTTCTCTCATCTTGATTTATCTTCGTTTCTTGCAATCTCCTTGGTTTTCCTTCCTTTGCTTTCTGTCTGAGTTGTTTCTTGGCGCTTTGGATTATGGTTGCTGCTTACTGTCTTCTGTGTTGGTTGAGTGTTTTGGTTTCTGAGTTTGGTTAATTAGCATGTTCTGGTTCGCCGAGCGGGCTGTAATAACCTAGATCTGTTTGATGGGAGGTGTTTTCTTATCAAGCTTGTGTTCTTATGGTTCAACCGAGTGTTTTATTGCTTTCGAAGTTGGTTCTGATGTCTTCTTACTGCGATATGTTAAGGCTTTGTTCTTCAACTTTCATGGTTGGAAGGGTAATAACGCTGGTTGATGATGGCTAAAAAAGCTTAGATTCAGAAGGCATTGAAGAATTCATTGATTAGATGTTAGTGAAGTAGTTGGGACTCGGTATTGCCTGAGCGGACTCTTGTTGAGGAAGATAATGGCTTCTGTTTCGCAGATCGTGTGCTCTCCTGAGCCATTTCATTTTCAAATATCTTATAATTTGAATTAGCAACAGAAAGTTTTGATTCTTCCAATTATTCTTTCCCCTGTCTCCCGAGAAAGTATAAAGGTATCTGGCTTCCTTCTACAGGAATTCGTCTCCTGTTTTCCATGGGGGATATATTGAAATTCTCTTTCATGCATTGTAGCTCCTCAACCTTTTGATTTGTTTCTCAAAATATCTCCTGGAGGAAAAAAAAAAAAAAAGAAAAAGAAAAAATTATTTCAATGAAATTTCTATTCTGGGTTAGCAGGATCATTGAACACAATAATGACTTAGAAGTAGTTTAGAGTCTCTTTCTAACAAGAGAAACTATGCCATCTGCTGGATTTCTTAGTATGTGTGAAACTTTTGTGTAACTGTCCAAACCCATCGCTAGTAGATACTATCCACTTTTGTCAGTTACGTATTGCCGTCAGCCTCACGGTTTTAAAATGTGTCTGCTAAGGAGAAGTTTTCACAGGGAATGCTACATTTCCCTCTCCAACCGATGGAATCTTGAGCTGTTACATTTTTCTCATAGTTTCTTGGGCTTACTATTCTCTCTCGAACTCAATGACACCATGGTACAACCCTAAAGAACAGATCTTGTTCTAGTAAGGTCGTCGCTCCTAGTCACTTTATTATGAACTTTTCTTGGTTTTGTCTAATTAGCCCAATCTCTCATAAAAACTGAAGCTTCTATGATGGATTGCCTAGAAGATATAAAGGTGCCACTGCCCCCTTCCACAAAATAAGCATCTGACAAAGGAAATGAAATGATCTGCAATTCTTGATGTGTTTTCCAACTCTCGATTAACTATGATTTTACTATTTGTTTTTGTTATACCTTTAATGATGCTCATGGATGTTGATTAGTAGATTGAAACTTTTTTTCTAATAGTTAATAAGATGGCTTCATCATTCATCAATAAGATTCTGGTAGACTGATTGTGCGAGATCTCTCAAGTTTTCTTTAAATTAAATGAGCTGTTCAGATCTACATGGGTTCTGTGTCTATAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGGGCAGTCGGTGCACTCCTTGTATATGATGTCACTCGTCATGCAACATTCGAGAACGTCGATCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTATGCTGAGAAGGAATCACTGTATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTTGAAGGCGGAGAAAATGGCTCTGCTACCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTTGGTAATCTGCCTAGATGATTTTCGATTTCATGTAATGTAATATATTTTTTCCTTGAAGATGGTTATGAAGAAAAAGGAAGATACATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGTACCTTAGCCACATGATTGGTTCGTGGTTGCTGTTGTGTCATTATTAGCATCTTGGTTTCAAGTTTCCATGGAAAATGTCCACCATTTTAGCCTCTACTACCCCTTTGATCTGTATAAGCATTCATGATGTCCTATGATGATAAATGATGTTGATGAACTCTCATATTCATTCATATGTTGTTCAAGTCAGTTATGATGGCTCTTTGAGCTGTGAACCTATATTACTTTTTAGCCTATCTATTTCGGTAAAAAATTATCATTTTGGTCCCTTTTACTTTGATTTGTATCCTATTATTTTTGTTATTATTCCCATTACATTTCATAAATCTTTAAATTTAGTCGATGCCATTAGGAGTGTAGGGAGAGCCCGTTATGCCTTGTTTTTGTTTGACCAGCCTATCCTCTTTCGAGAAGGAAGCTCCCTCCGGTTGTCCAGTTCCTAAGCGGCTCTCGATTTTTTAGCATGTTGGGAGATTAGGTGACAGTTTCAAAACTTGAAAGCTTGATGAACATGCAAATCAAGCCCGTTTTCATTTATTTGGAACCTTTATTTTCTGACGTGAAATTATTATTATTTAATTTAACTTTGGTATAATACTAAATTTAAATAATTGAAAGTATATTAAGTAGAATGTAATTCAAAATTTATTTATAAGATAAAAGATTGAATTAGAAATAAAATAATCTAATATAACATTACCAATTTTTAAATCTCATTCACAAGGTGAGATTTAAAATAAAAATAAAATAATTAATTTTGTTATTATTATTATTTAGAAATTGTCATAAATGTAGTATTTTTTTTTTTTTTTTTTTTAATAATAAACTTGTGAATTGAAGTTCAGAGCCCATTATAAGCCCAACTAGAAACCACATGCGCATAAACACAGACACACACGGCCTCCCGCCCAATTTTGTTCTCTTCAATTTTCCCTCTCGATTTCAGACCGTCGAAACCCCATCGGAGGAACTCGGCGTTTCAATTCTCTACTGTTCGACAAATCTCACTTCTTTTGAGCTATCAAAATCCATGAGAATGAGGGAGGAAGAAATCGAGAAGCTCCGAGGCGTAGTAAGGGACTGCGTGAGCAAGCATCTCTACTCATCCGCCATTTTCTTCGCTGACAAAGTTGCCGCTTTCACTGAGGACCCTGCCGACATTTACATGCAGGCGCAGGCCCTCTTTCTTGGCCGCCATTTTCGTCGTGCGTTTCACCTCCTTAATGCCTCCAAGATCGTCCTCCGCGATCCGCGGTTTCGCTACCTTGCTGCCAAGTGTCTCGTAAGCTTACTTGGAACTTCACTGTTTATCTGTGTTTTTTTTTTCTCTGTTGATTTTAGACCTCCTGTGTTTTTTCGTATGGATTTTGATTTGATGTGTTAGGGGTTTTTCTTGTGAATTCTGTTTATGATGTTGTGGGTCTCTGAACGCGGCTGTGTTTGTGTGGGAATAGCGGGAATTGGATCAGTTGTTTGCAGTAGGAAAATTTGATTACCGGAAATTCAGTTTCTTCAGAGATGAGGAACACAGGATAAGACATTTTGGGCATGTAGTCAGATCTTCTGTTTTTAATAAATGTCATTCGTTTATAAATCTTTGATTGGCCAGGAGGAATTGAAGGAGTGGGACCAATGCCTCATGATGCTTGGTGATGCCAAAGTGGACGAGCATGGCAATGTTCTTGATAATAAGGATCACAGTGGCATGTACCTCGACAAAGATTCCGAGGATCGTGAGATTAATGTACTGTTATGTTACATCATATCAACTTATTTTAAAAGAACACCCTCGGTTTAAGACTTTCAGGATGGTTAGATCATTAGTTTCACAATGGGATTCTCTGTTTTCCTACCTTGTAACAGATAGCCGCAGCTACATGCTTTTTAAGAGGCAAGGCATATGAAGCTCTGGAAAATCGCACTCAGGCTCGACTTTGGTGAGTTTATGAACACATTTTTACCTCCATGAGCGCCTTAACCAGAACCTACAGAGTTATTAAACTGTGAAACTTCAAATTAATGAATGATGTCATTTATTTATTATGATTTTTTGAAAATGGTGTTTAGGTATAAAGCTGCTATCAAAGCTGACCCTCTATGTTATGAGGTAAATATGTTTCTTTGCCGAACTTTGGTATTGCTGAACGTATTCAGCTTAGCGTACTGTTACCATTCTTGTATGTCATAGTTTTAGAAGCTGAAAATTAGTGTTCCTGTTTAGTTAATGACTTGTCCTTTTTCAAAGATCAGGCAACAAAATCTCTCCTTCCTTTTTTGGTGTAGCCATTAATTTGTAAGAGAAACGTAACTTTTTTATTTATGTTTTGGTTTCATTCTTTTAATAGATACCATTTTTATGTCCATTTTTGTCCAGGCTTTGGAGTGCCTAATAGAAAGTCACATGCTGACTTGTGATGAAGGTAAACCTCAATACTACGCATTTAACGTTTTAAAAAGCTATTGAGGTTTATGCCCTCTGGCAATATTCTAACGTTTAGCCTCGAGACTTGCGTCTTCGTTGAACCATAAGAGGCTTACACCTTGTTAAAAACACACTGAAGCTTACACCTTGTGAACTTTTTGATATTTATATGTATTCTGTCAATTTTTCATTGATGAAATATTTAACTTATCATTTATTTTTCAATCTCGCCCCCGTCTTTCGTCAGGATTATTAATAATCTACTTTTATATGATGTGAAATTTCAGAA

mRNA sequence

TTCACGCACTTCCTCCCACTTGATTTTCTCTCTCTCTCTCTCTGGTTCGATTCTTCTTCTTCTTCCTCGTAAAGTTTGAAGTAAATCGAAGCAACAATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACTTTGAAGGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGGGCAGTCGGTGCACTCCTTGTATATGATGTCACTCGTCATGCAACATTCGAGAACGTCGATCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTATGCTGAGAAGGAATCACTGTATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTTGAAGGCGGAGAAAATGGCTCTGCTACCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATATGGTTATGAAGAAAAAGGAAGATACATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGTACCTTAGCCACATGATTGACACACACGGCCTCCCGCCCAATTTTGTTCTCTTCAATTTTCCCTCTCGATTTCAGACCGTCGAAACCCCATCGGAGGAACTCGGCGTTTCAATTCTCTACTGTTCGACAAATCTCACTTCTTTTGAGCTATCAAAATCCATGAGAATGAGGGAGGAAGAAATCGAGAAGCTCCGAGGCGTAGTAAGGGACTGCGTGAGCAAGCATCTCTACTCATCCGCCATTTTCTTCGCTGACAAAGTTGCCGCTTTCACTGAGGACCCTGCCGACATTTACATGCAGGCGCAGGCCCTCTTTCTTGGCCGCCATTTTCGTCGTGCGTTTCACCTCCTTAATGCCTCCAAGATCGTCCTCCGCGATCCGCGGTTTCGCTACCTTGCTGCCAAGTGTCTCGAGGAATTGAAGGAGTGGGACCAATGCCTCATGATGCTTGGTGATGCCAAAGTGGACGAGCATGGCAATGTTCTTGATAATAAGGATCACAGTGGCATGTACCTCGACAAAGATTCCGAGGATCGTGAGATTAATATAGCCGCAGCTACATGCTTTTTAAGAGGCAAGGCATATGAAGCTCTGGAAAATCGCACTCAGGCTCGACTTTGGTATAAAGCTGCTATCAAAGCTGACCCTCTATGTTATGAGGTAAATATGTTTCTTTGCCGAACTTTGGTATTGCTGAACGTATTCAGCTTAGCGTACTGTTACCATTCTTAA

Coding sequence (CDS)

ATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACTTTGAAGGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGGGCAGTCGGTGCACTCCTTGTATATGATGTCACTCGTCATGCAACATTCGAGAACGTCGATCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTATGCTGAGAAGGAATCACTGTATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTTGAAGGCGGAGAAAATGGCTCTGCTACCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATATGGTTATGAAGAAAAAGGAAGATACATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGTACCTTAGCCACATGATTGACACACACGGCCTCCCGCCCAATTTTGTTCTCTTCAATTTTCCCTCTCGATTTCAGACCGTCGAAACCCCATCGGAGGAACTCGGCGTTTCAATTCTCTACTGTTCGACAAATCTCACTTCTTTTGAGCTATCAAAATCCATGAGAATGAGGGAGGAAGAAATCGAGAAGCTCCGAGGCGTAGTAAGGGACTGCGTGAGCAAGCATCTCTACTCATCCGCCATTTTCTTCGCTGACAAAGTTGCCGCTTTCACTGAGGACCCTGCCGACATTTACATGCAGGCGCAGGCCCTCTTTCTTGGCCGCCATTTTCGTCGTGCGTTTCACCTCCTTAATGCCTCCAAGATCGTCCTCCGCGATCCGCGGTTTCGCTACCTTGCTGCCAAGTGTCTCGAGGAATTGAAGGAGTGGGACCAATGCCTCATGATGCTTGGTGATGCCAAAGTGGACGAGCATGGCAATGTTCTTGATAATAAGGATCACAGTGGCATGTACCTCGACAAAGATTCCGAGGATCGTGAGATTAATATAGCCGCAGCTACATGCTTTTTAAGAGGCAAGGCATATGAAGCTCTGGAAAATCGCACTCAGGCTCGACTTTGGTATAAAGCTGCTATCAAAGCTGACCCTCTATGTTATGAGGTAAATATGTTTCTTTGCCGAACTTTGGTATTGCTGAACGTATTCAGCTTAGCGTACTGTTACCATTCTTAA

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSATSVPAQGEKINIKDESGLNRIKYGYEEKGRYIYIPKTFNLAALQKEEYLSHMIDTHGLPPNFVLFNFPSRFQTVETPSEELGVSILYCSTNLTSFELSKSMRMREEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTEDPADIYMQAQALFLGRHFRRAFHLLNASKIVLRDPRFRYLAAKCLEELKEWDQCLMMLGDAKVDEHGNVLDNKDHSGMYLDKDSEDREINIAAATCFLRGKAYEALENRTQARLWYKAAIKADPLCYEVNMFLCRTLVLLNVFSLAYCYHS

Homology

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BLAST of CmaCh16G004340 vs. Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.9e-95
Identity = 184/213 (86.38%), Postives = 195/213 (91.55%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRI 213
           K VE GE+G+A SVP +GEKI +K D S L ++
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKL 211

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BLAST of CmaCh16G004340 vs. Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.1e-94
Identity = 170/209 (81.34%), Postives = 194/209 (92.82%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TL VD+K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVPTEDGKS+AE+ESLYF+ETSALEA NVE AF EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGL 210
           +AVE G++GS++ +P++G+ IN+K++S +
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSV 209

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BLAST of CmaCh16G004340 vs. Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.0e-92
Identity = 171/215 (79.53%), Postives = 191/215 (88.84%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++L +D+K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV T++ K  AE+E LYF+ETSALEA NVE AF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKYG 216
           KAVE G+ G+ +S P +GE INIKDE G +  K+G
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDE-GSSWKKFG 214

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BLAST of CmaCh16G004340 vs. Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.9e-92
Identity = 175/212 (82.55%), Postives = 193/212 (91.04%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L VD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AEKESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINI-KDESGLNR 212
           KA+E      + +VP++G+KI+I KD S + +
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKK 210

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BLAST of CmaCh16G004340 vs. Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 339.3 bits (869), Expect = 6.7e-92
Identity = 170/205 (82.93%), Postives = 193/205 (94.15%), Query Frame = 1


Query: 2   AGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSKV 61
           AGYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+L+VD KV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVV 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWLKEL++HTD NIVV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKK 181
           MLVGNKSDLRHLVAV T++GK++AE+ESLYF+ETSALE+ NVE AFAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AVEGGENGSATSVPAQGEKINIKDE 207
           +VE G++  A S P +GEKINIKD+
Sbjct: 183 SVEAGDD--AGSGPGKGEKINIKDD 205

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BLAST of CmaCh16G004340 vs. TrEMBL
Match: A0A0A0KXK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 7.6e-111
Identity = 208/213 (97.65%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIK 214
           KAVEGGENGSA++VPAQGEKINIKDESGLNRIK
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIK 213

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BLAST of CmaCh16G004340 vs. TrEMBL
Match: M5X2E3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 6.5e-102
Identity = 197/213 (92.49%), Postives = 203/213 (95.31%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAEKESLYF+ETSALEA NVE +FAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAKNVENSFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDE-SGLNRI 213
           KAVEGGENG+A SVPA GEKINIKD+ S L R+
Sbjct: 181 KAVEGGENGTA-SVPATGEKINIKDDVSALKRV 212

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BLAST of CmaCh16G004340 vs. TrEMBL
Match: Q08150_PEA (GTP-binding protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.1e-100
Identity = 194/213 (91.08%), Postives = 202/213 (94.84%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNK+DLRHLVAV TEDGKSYAEKESLYF+ETSALEA NVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRI 213
           K VEG ENG+A SVPA+GEKI++K D S L R+
Sbjct: 181 KTVEGAENGNA-SVPAKGEKIDLKNDVSALKRV 212

[Close]

BLAST of CmaCh16G004340 vs. TrEMBL
Match: Q7DLK8_VICFA (Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.1e-100
Identity = 194/213 (91.08%), Postives = 202/213 (94.84%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNK+DLRHLVAV TEDGKSYAEKESLYF+ETSALEA NVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRI 213
           K VEG ENG+A SVPA+GEKI++K D S L R+
Sbjct: 181 KTVEGAENGNA-SVPAKGEKIDLKNDVSALKRV 212

[Close]

BLAST of CmaCh16G004340 vs. TrEMBL
Match: I1M2Z5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G269000 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 6.0e-100
Identity = 194/213 (91.08%), Postives = 202/213 (94.84%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTD+NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAEKESLYF+ETSALEA NVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRI 213
           KAVE  ENG+ TSVPA+GEKI++K D S L R+
Sbjct: 181 KAVEVAENGT-TSVPAKGEKIDLKNDVSALKRV 212

[Close]

BLAST of CmaCh16G004340 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B)

HSP 1 Score: 350.5 bits (898), Expect = 1.6e-96
Identity = 184/213 (86.38%), Postives = 195/213 (91.55%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRI 213
           K VE GE+G+A SVP +GEKI +K D S L ++
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKL 211

[Close]

BLAST of CmaCh16G004340 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C)

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-93
Identity = 175/212 (82.55%), Postives = 193/212 (91.04%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L VD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AEKESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINI-KDESGLNR 212
           KA+E      + +VP++G+KI+I KD S + +
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKK 210

[Close]

BLAST of CmaCh16G004340 vs. TAIR10
Match: AT4G18800.1 (AT4G18800.1 RAB GTPase homolog A1D)

HSP 1 Score: 338.6 bits (867), Expect = 6.4e-93
Identity = 169/203 (83.25%), Postives = 190/203 (93.60%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+L V+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINI 204
           KA+E GE+    +VP++GEKI++
Sbjct: 181 KAMEAGEDSG--NVPSKGEKIDV 201

[Close]

BLAST of CmaCh16G004340 vs. TAIR10
Match: AT1G06400.1 (AT1G06400.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-89
Identity = 160/209 (76.56%), Postives = 187/209 (89.47%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T KV+ K
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATFEN  RWL+EL+ HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNK DLRHLVAV TE+ K++AE+ESLYF+ETSAL+A NVE AF EVLTQI+ IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGL 210
           ++V+GG  G +  +P +GE IN+K++  +
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSV 207

[Close]

BLAST of CmaCh16G004340 vs. TAIR10
Match: AT3G15060.1 (AT3G15060.1 RAB GTPase homolog A1G)

HSP 1 Score: 312.4 bits (799), Expect = 4.9e-85
Identity = 153/213 (71.83%), Postives = 190/213 (89.20%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MA YRADDDYD+L+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ VD K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           +MLVGNK+DLRHL AV TED K++AE+E+ +F+ETSALEA+NVE AF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIK 214
           KA++ G++   T++P +G+ IN+  +  ++ +K
Sbjct: 181 KALDIGDD--HTTLP-KGQSINVGSKDDVSEVK 210

[Close]

BLAST of CmaCh16G004340 vs. NCBI nr
Match: gi|449438915|ref|XP_004137233.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110
Identity = 208/213 (97.65%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIK 214
           KAVEGGENGSA++VPAQGEKINIKDESGLNRIK
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIK 213

[Close]

BLAST of CmaCh16G004340 vs. NCBI nr
Match: gi|659101717|ref|XP_008451755.1| (PREDICTED: ras-related protein RABA1b-like [Cucumis melo])

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 207/213 (97.18%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIK 214
           KAVEGGENGSA++VPAQGEKINIKDESGLNR+K
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMK 213

[Close]

BLAST of CmaCh16G004340 vs. NCBI nr
Match: gi|470115898|ref|XP_004294128.1| (PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca])

HSP 1 Score: 387.9 bits (995), Expect = 2.6e-104
Identity = 199/213 (93.43%), Postives = 206/213 (96.71%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAEKESLYF+ETSALEAVNVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAVNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDE-SGLNRI 213
           KAVE GENG+A+SVPA+GEKINIKD+ S L R+
Sbjct: 181 KAVEAGENGTASSVPAKGEKINIKDDVSALKRV 213

[Close]

BLAST of CmaCh16G004340 vs. NCBI nr
Match: gi|1009161879|ref|XP_015899132.1| (PREDICTED: ras-related protein RABA1b [Ziziphus jujuba])

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 195/213 (91.55%), Postives = 204/213 (95.77%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHT+SNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTESNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAEKESLYF+ETSALEA NVE AFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDE-SGLNRI 213
           KAVEGGENG+ +SVP++GEKINIKD+ S L R+
Sbjct: 181 KAVEGGENGTDSSVPSKGEKINIKDDVSALKRV 213

[Close]

BLAST of CmaCh16G004340 vs. NCBI nr
Match: gi|595872726|ref|XP_007212036.1| (hypothetical protein PRUPE_ppa011259mg [Prunus persica])

HSP 1 Score: 379.4 bits (973), Expect = 9.3e-102
Identity = 197/213 (92.49%), Postives = 203/213 (95.31%), Query Frame = 1


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL+NHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TEDGKSYAEKESLYF+ETSALEA NVE +FAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEAKNVENSFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDE-SGLNRI 213
           KAVEGGENG+A SVPA GEKINIKD+ S L R+
Sbjct: 181 KAVEGGENGTA-SVPATGEKINIKDDVSALKRV 212

The following BLAST results are available for this feature:

BLAST of CmaCh16G004340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA1B_ARATH	2.9e-95	86.38	Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1	[more]
RB11D_LOTJA	1.1e-94	81.34	Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1	[more]
YPT3_NICPL	3.0e-92	79.53	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1	[more]
RAA1C_ARATH	3.9e-92	82.55	Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=2 SV=1	[more]
RIC2_ORYSJ	6.7e-92	82.93	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2	[more]

BLAST of CmaCh16G004340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK6_CUCSA	7.6e-111	97.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082460 PE=4 SV=1	[more]
M5X2E3_PRUPE	6.5e-102	92.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011259mg PE=4 SV=1	[more]
Q08150_PEA	2.1e-100	91.08	GTP-binding protein OS=Pisum sativum PE=2 SV=1	[more]
Q7DLK8_VICFA	2.1e-100	91.08	Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1	[more]
I1M2Z5_SOYBN	6.0e-100	91.08	Uncharacterized protein OS=Glycine max GN=GLYMA_13G269000 PE=4 SV=1	[more]

BLAST of CmaCh16G004340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16920.1	1.6e-96	86.38	RAB GTPase homolog A1B	[more]
AT5G45750.1	2.2e-93	82.55	RAB GTPase homolog A1C	[more]
AT4G18800.1	6.4e-93	83.25	RAB GTPase homolog A1D	[more]
AT1G06400.1	1.5e-89	76.56	Ras-related small GTP-binding family protein	[more]
AT3G15060.1	4.9e-85	71.83	RAB GTPase homolog A1G	[more]

BLAST of CmaCh16G004340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438915\|ref\|XP_004137233.1\|	1.1e-110	97.65	PREDICTED: ras-related protein RABA1b-like [Cucumis sativus]	[more]
gi\|659101717\|ref\|XP_008451755.1\|	2.4e-110	97.18	PREDICTED: ras-related protein RABA1b-like [Cucumis melo]	[more]
gi\|470115898\|ref\|XP_004294128.1\|	2.6e-104	93.43	PREDICTED: ras-related protein Rab11D [Fragaria vesca subsp. vesca]	[more]
gi\|1009161879\|ref\|XP_015899132.1\|	1.4e-102	91.55	PREDICTED: ras-related protein RABA1b [Ziziphus jujuba]	[more]
gi\|595872726\|ref\|XP_007212036.1\|	9.3e-102	92.49	hypothetical protein PRUPE_ppa011259mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR011990	TPR-like_helical_dom_sf
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G004340.1	CmaCh16G004340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 2.1
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 1.8
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 336..471 score: 6.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 331..471 score: 7.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..200 score: 3.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180 score: 4.87
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 6.9E-41coord: 152..174 score: 6.9E-41coord: 117..130 score: 6.9E-41coord: 55..77 score: 6.9E-41coord: 37..53 score: 6.9
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 5..212 score: 2.6E
None	No IPR available	PANTHER	PTHR24073:SF432	RAS-RELATED PROTEIN RABA1C-RELATED	coord: 5..212 score: 2.6E
None	No IPR available	PFAM	PF12895	ANAPC3	coord: 312..390 score: 5.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 9.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..173 score: 2.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 3.3E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 score: 1.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..226 score: 35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G004340	Cucsa.273710	Cucumber (Gy14) v1	cgycmaB0759
CmaCh16G004340	Cla005375	Watermelon (97103) v1	cmawmB308
CmaCh16G004340	Csa4G082460	Cucumber (Chinese Long) v2	cmacuB337
CmaCh16G004340	MELO3C016125	Melon (DHL92) v3.5.1	cmameB301
CmaCh16G004340	ClCG07G010230	Watermelon (Charleston Gray)	cmawcgB300
CmaCh16G004340	CSPI04G07890	Wild cucumber (PI 183967)	cmacpiB342
CmaCh16G004340	CmoCh04G007170	Cucurbita moschata (Rifu)	cmacmoB339
CmaCh16G004340	CmoCh16G004690	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G004340	Lsi07G008850	Bottle gourd (USVL1VR-Ls)	cmalsiB325
CmaCh16G004340	Cp4.1LG14g03580	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G004340	Cp4.1LG01g00710	Cucurbita pepo (Zucchini)	cmacpeB352
CmaCh16G004340	MELO3C016125.2	Melon (DHL92) v3.6.1	cmamedB351
CmaCh16G004340	CsaV3_4G008100	Cucumber (Chinese Long) v3	cmacucB0393
CmaCh16G004340	Cla97C07G136910	Watermelon (97103) v2	cmawmbB350
CmaCh16G004340	Bhi01G002484	Wax gourd	cmawgoB0437
CmaCh16G004340	CsGy4G007750	Cucumber (Gy14) v2	cgybcmaB498
CmaCh16G004340	Carg11366	Silver-seed gourd	carcmaB0924

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G004340	CmaCh04G006710	Cucurbita maxima (Rimu)	cmacmaB352

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G004340	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh16G004340	Cucurbita maxima (Rimu)	cmacmaB353
CmaCh16G004340	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G004340	Cucurbita moschata (Rifu)	cmacmoB340
CmaCh16G004340	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G004340	Cucurbita pepo (Zucchini)	cmacpeB353
CmaCh16G004340	Bottle gourd (USVL1VR-Ls)	cmalsiB329
CmaCh16G004340	Silver-seed gourd	carcmaB0052
CmaCh16G004340	Silver-seed gourd	carcmaB0053