CmoCh04G005260 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G005260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein disulfide-isomerase SCO2
Location	Cmo_Chr04 : 2613242 .. 2616651 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATCAAACCCAATAAAACCTCTGGTTTGTGGTCCCCAGTTGGTCTTCACCTCGAACGCAATCCTCCATCACCACCTGCCCACTCCACTGCCTATGAACACGCCGGTGGCCACAATCCATAATTTCCCTCCTCCGTCAGACAGTTCCGTTCATTGATAAAAGCTAAACAATCCGATTGACTTCTACGTTCGGGTAATGTTCGCCGTAAACCCCACTTCCCTTTTCTTCCCTTCCAATCCCACCGCTACACGTCAACAATCCATCTCTCTCTCCCCCTCCTTCCGCCGCAGCTGTGCCGCTGCCGGAGACGCCTCGGTCGGCCCTTCATTTTCTCGGCTGTTCAATTTTCCGTCTGTTTCTGCCACCGACGCTACCGGCGGCTTTCGACTCGGACAAGAGTACGACGGCGGAGCTTCCTCCGGCTCTGTTGATGGAGTGGGGAGGTCGGGTAGCGGAAATGGCAGCGTCAAAGCAAACGCCATGGAGAAGAAATGGTCGCGGGATAGAGAGAGTTACTTGGTCGATAGTAGCGAGGTTCTTCCTCTTCCTATGACTTATCCGGATTCTTCCCCTGTCACGCCTGAGGAGATTGACCGACGGCTTCAGTGCGATCCCCAAGTGGAGGTCAGTAATTCGCATCATAACTTTTGATATAGTTCTTCTGAATTCAAACTTGCGCTTCTGGTGCTTTTACTTTTTCCTAATCCTGCATATCGTAGAAAGCGATTTGCAGTGGCTTCCCTGTTATGTGCCCTAGAACGTATGTTCTTGACTCATTTGAGAGGTTACTTTGAATTGCTTTAGAAAACGACTTGTTACATTGATTCAATTATCTGGAAACTGGAGATTTACTTGTTACAGTTGAAGTATTGGTATTATGAACGACCTTAGCATACTTTAGCTGAGTTTATCTCCTCAAAATTAGGCTGCATTGGTGGGTTTAATGCCCTTTCCAACCTCACAAATATGCCAGTTATCTCCGTTTTGGAGTTTTGGATTTGAAGCCATTCTTGTAAATTGTAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAGGGGTCTGGATTTGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATTCCTTGCCTTGGAGTTGGTATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATGTTCCATTTTCCTATGGGAACGAACACATAATCCAAATAGTAGGGTATTGCAGTGTTGTATTGTTGGGGTTTTACTGCTTCTTATCATGAAAACGAAATACTTGATATTCAAAAGGTAATAAACACTCTCATGCTAATATTCTTCTTGAGTTCAACCCAACCCACAAGGGCGAAAGATTTGATCCTCTAGTCGAGGAGATATACCTTAACTAGTTGAGTTATGTTCAAGTTGATGCTAATGTGCTTATTTAGATTGGCGTTTTGTCAATCAATAGTTATTGCTGGCTATCTTCATTGATGTGCTTTTGGCATTGACAGCTATGAGCATGATATACCCTAATCAGTTGAGTTATACTTAGGTTGATGCTAATGTCGTTATTTAGATTGATGTTCTGTCAATCAATAGTTATTGCTACGTTCTTTTGGCATTGATAACTATGAGTATGATATACCCTGAGTTATGCTTAGGTTGATGTTAATGTCCTTATTTAGATTGGCGTTTTGTCGATCAATAACTATTGCTTGCTATCTTTATTGACATGATTTTGGCATTGACAACTATGAGCAGGATATATCCTAATCAGTTGAGTTATGCTCAGGTTGATGCCAATGTCCTTATTTAGATCGGCGTTTTGTCAATCAATAGCTATCGTATGCTATCTGCATTGATGTGCTTTTGACATTAACAACTATGAGCATGATATACCCTAATCAGTTGAGTTATGCTTAGGTTGATGCTAATGTCCTTATTTAAATCGGCGTTTTGTCAATCAATAGTTATTGCTTGCTATCTTCATTGATGTGCTTTTGACATTGGCAACTATGAGCATGATATACCCTAATCAGTTAAGTTATGCTCAAGTTGAGTCCTTATATAGATTGACGTTTTGTCAACCAACCATTATTGCTTGCTATCTTCATTGACGTACTTTTGGTATTGACAACTATGAGCACGATATACCCTAATCAGTTAAGTTATGCTCAAGTTGAGTCCTTATATAGATTGATGTTTTGTCAACCAACTATTATTGCTTGCTATCTTCATTGACGTACTTTTGGTATTGACAACTATGAGCATGATATACCCTAACCAGTTGAGTTATGCTCAAGTTGATGCTAATGTCCTTATTTAGATTGACGTTTTGTCAATCAACCGTTATGGCTTGTTATCTTCAATGACGTACTTTTGGCATGGACTACTATGAGCATGACTGTAGGAGTCCAAATGAAAATCCTAGGAATTTCTGCTCATCATTGAATTTCTTTGATAAAATGATAGCTTCAATGGTCTACCTTCTGTTTAGATCAAGGGCTTTTATCATTCTGATCTTAAATTTGTCTCAGACAATAGGAACTTCTGTTACAAATGATGCTTCTTCTTCACCAACTAGAAACTCTTTTACACTTCTAATGAAAAGTTCATGTTTTTTACAACACAAAAACATTTTCCTCGTAACTAATGTCGGATTCACTGATACTTCCAACAAATTTTCATTGTCTGCTGATTCTTGCTTTTCATTTCAATGCATTTTCTCCCCTTATATCAATACAATTTCTCCAACCTCTTGATGCTTACCAAACCAACATCTTGACAATATTGTGTAGTAACTTTGAGGACATGACATGATGGCTGCCTTTCCAATCAAAAGGAATGAACCTAATGGATAGTTCTCCCATTTTTGTGGGCGCTCGCTCCTTTTATATGTCCTTGTATCCTTTCATTTTCGCTCGTTAAACGTCCGGTTATTCATGCTGATTTTCGGAACCTAAATCTTGGATCAAATTTGCTTCTTCTGTTGTTTGCAATTCTGCAGGGTATGTGCAGAAGATAACAGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATGGAAAACCATTGTGATGTGATTCAATGCATTATTTACTCTCTTTTTTTGGAAAATAGTACCTCTCTAACTTCTTCACCCCTGAGGAGGAGTAATTTTTCACACACAGATTAGCCTTTGTATTGATAATAGGCAACATAGACAACTGAGAGAATGTTGGCCTGCTAAGCAAACAATAAAAGTACTGCAAATTTGGCAGTGAGCTTCGGCCTTGTTCTTCACTATCTTTAGCATTGTTAAGTCTTGATTCTCTGTTACAATCCTGCAAAGAGTCTGTTCTAGATACTATTTTTCAAATGAACTTGTATTTATTTCTATTACGGATCGAGATTCAACCTCGAGAGAAGGCTA

mRNA sequence

GTTTATCAAACCCAATAAAACCTCTGGTTTGTGGTCCCCAGTTGGTCTTCACCTCGAACGCAATCCTCCATCACCACCTGCCCACTCCACTGCCTATGAACACGCCGGTGGCCACAATCCATAATTTCCCTCCTCCGTCAGACAGTTCCGTTCATTGATAAAAGCTAAACAATCCGATTGACTTCTACGTTCGGGTAATGTTCGCCGTAAACCCCACTTCCCTTTTCTTCCCTTCCAATCCCACCGCTACACGTCAACAATCCATCTCTCTCTCCCCCTCCTTCCGCCGCAGCTGTGCCGCTGCCGGAGACGCCTCGGTCGGCCCTTCATTTTCTCGGCTGTTCAATTTTCCGTCTGTTTCTGCCACCGACGCTACCGGCGGCTTTCGACTCGGACAAGAGTACGACGGCGGAGCTTCCTCCGGCTCTGTTGATGGAGTGGGGAGGTCGGGTAGCGGAAATGGCAGCGTCAAAGCAAACGCCATGGAGAAGAAATGGTCGCGGGATAGAGAGAGTTACTTGGTCGATAGTAGCGAGGTTCTTCCTCTTCCTATGACTTATCCGGATTCTTCCCCTGTCACGCCTGAGGAGATTGACCGACGGCTTCAGTGCGATCCCCAAGTGGAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAGGGGTCTGGATTTGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATTCCTTGCCTTGGAGTTGGGTATGTGCAGAAGATAACAGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATGGAAAACCATTGTGATGTGATTCAATGCATTATTTACTCTCTTTTTTTGGAAAATAGTACCTCTCTAACTTCTTCACCCCTGAGGAGGAGTAATTTTTCACACACAGATTAGCCTTTGTATTGATAATAGGCAACATAGACAACTGAGAGAATGTTGGCCTGCTAAGCAAACAATAAAAGTACTGCAAATTTGGCAGTGAGCTTCGGCCTTGTTCTTCACTATCTTTAGCATTGTTAAGTCTTGATTCTCTGTTACAATCCTGCAAAGAGTCTGTTCTAGATACTATTTTTCAAATGAACTTGTATTTATTTCTATTACGGATCGAGATTCAACCTCGAGAGAAGGCTA

Coding sequence (CDS)

ATGTTCGCCGTAAACCCCACTTCCCTTTTCTTCCCTTCCAATCCCACCGCTACACGTCAACAATCCATCTCTCTCTCCCCCTCCTTCCGCCGCAGCTGTGCCGCTGCCGGAGACGCCTCGGTCGGCCCTTCATTTTCTCGGCTGTTCAATTTTCCGTCTGTTTCTGCCACCGACGCTACCGGCGGCTTTCGACTCGGACAAGAGTACGACGGCGGAGCTTCCTCCGGCTCTGTTGATGGAGTGGGGAGGTCGGGTAGCGGAAATGGCAGCGTCAAAGCAAACGCCATGGAGAAGAAATGGTCGCGGGATAGAGAGAGTTACTTGGTCGATAGTAGCGAGGTTCTTCCTCTTCCTATGACTTATCCGGATTCTTCCCCTGTCACGCCTGAGGAGATTGACCGACGGCTTCAGTGCGATCCCCAAGTGGAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAGGGGTCTGGATTTGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATTCCTTGCCTTGGAGTTGGGTATGTGCAGAAGATAACAGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATGGAAAACCATTGTGA

Homology

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BLAST of CmoCh04G005260 vs. Swiss-Prot
Match: SCO2_ARATH (Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 100/180 (55.56%), Postives = 116/180 (64.44%), Query Frame = 1


Query: 27  PSFRRSCAAAGDASVGPSFSRLFNFPSVSATDATGGFRLGQEYDGGASSGSVDGVGRSGS 86
           PS    C AA D  +G                   G RL +E D  + +     V  +  
Sbjct: 23  PSRSLRCRAAADIPLGD------------------GIRLPREADSTSDTARSRDVSVAAG 82

Query: 87  GNGS-VKANAMEKKWSRDRESYLVDSSEVLPLPMTYPDSSPVTPEEIDRRLQCDPQVEDC 146
           GNG   K       WS+  ESYLVD  + LPLPMTYPD+SPV+P+ IDRRLQCDP VEDC
Sbjct: 83  GNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVIDRRLQCDPVVEDC 142

Query: 147 KEVVYEWTGKCRSCQGSGFVSYYNKRGREITCKCIPCLGVGYVQKITARKDIELMEDLDN 206
           +EVVYEWTGKCRSCQGSG VSYY KRG+E+ CKCIPC G+GYVQKIT+R DIE+MEDLDN
Sbjct: 143 REVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSRTDIEVMEDLDN 184

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BLAST of CmoCh04G005260 vs. TrEMBL
Match: A0A0A0L6G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207360 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-92
Identity = 174/212 (82.08%), Postives = 186/212 (87.74%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTAT--RQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATD 60
           MFA+NP+S FFPSNPT    RQ SIS   SFR S AA GDAS  PS SRLFNFPS+SATD
Sbjct: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60

Query: 61  ATGGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLP 120
           ATGGF LGQ+YD GASS  +DG GR   GNG+VK NAMEKKWSRDRESYLVD S+VLPLP
Sbjct: 61  ATGGFSLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120

Query: 121 MTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCK 180
           MTYPDSSPV+P+EIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREITCK
Sbjct: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCK 180

Query: 181 CIPCLGVGYVQKITARKDIELMEDLD-NGKPL 210
           CIPCLG+GYVQKITARKDIELMEDLD NGKPL
Sbjct: 181 CIPCLGIGYVQKITARKDIELMEDLDNNGKPL 212

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BLAST of CmoCh04G005260 vs. TrEMBL
Match: A0A067LE01_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01623 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.7e-68
Identity = 140/222 (63.06%), Postives = 165/222 (74.32%), Query Frame = 1


Query: 1   MFAVNPTSLFF--------PSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFP 60
           M  +NPTSLFF        P +PTAT   + + S S R  C AAGD   GP+F R F F 
Sbjct: 1   MLPINPTSLFFCSKPSTLIPISPTAT---TTTTSTSHR--CFAAGDLRAGPTFPRWFQF- 60

Query: 61  SVSATDATGGFRLGQEYDGGASSGSVDGVGRS------GSGNGSVKANAMEKKWSRDRES 120
             SA DA G  R+GQE +G ASS + DG   +      G  NGSV+ NA EKKWSR+RES
Sbjct: 61  -TSAADA-GSIRIGQESEGPASSPTADGASIAPQRRGVGGSNGSVRVNAKEKKWSRNRES 120

Query: 121 YLVDSSEVLPLPMTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVS 180
           YL D+ +VLPLPMTYP+S PV  EEID+RL+CD +++DCKEVVYEWTGKCRSCQGSG+VS
Sbjct: 121 YLTDNEDVLPLPMTYPNSKPVPAEEIDKRLRCDAEIQDCKEVVYEWTGKCRSCQGSGYVS 180

Query: 181 YYNKRGREITCKCIPCLGVGYVQKITARKDIELMEDLDNGKP 209
           YYNKRG+EITCKC+PCLG+GYVQKITARKDI++MEDLDNGKP
Sbjct: 181 YYNKRGKEITCKCVPCLGIGYVQKITARKDIDVMEDLDNGKP 214

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BLAST of CmoCh04G005260 vs. TrEMBL
Match: B9HS05_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10520g PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 8.5e-67
Identity = 136/210 (64.76%), Postives = 157/210 (74.76%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATDAT 60
           M +++PTSLF PS PT  R +S      FR  C+AAGD S    F R   F S +     
Sbjct: 1   MLSISPTSLFLPSKPTFNRTRS------FR--CSAAGDLS----FPRWLQFTSAADASIG 60

Query: 61  GG-FRLGQEYDGGASS-GSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLP 120
           GG  R+GQE DG AS+ G   G G   SG  SV+ NA EKKWSR+RESYL D+ + LPLP
Sbjct: 61  GGSIRIGQELDGAASADGERKGFG-GNSGGSSVRVNAREKKWSRNRESYLADNEDALPLP 120

Query: 121 MTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCK 180
           MTYPDS PV PEEID+RL CDP+VEDC+EVVYEWTGKCRSCQGSGFVSYYNKRG+E+TCK
Sbjct: 121 MTYPDSKPVPPEEIDKRLSCDPEVEDCREVVYEWTGKCRSCQGSGFVSYYNKRGKEVTCK 180

Query: 181 CIPCLGVGYVQKITARKDIELMEDLDNGKP 209
           C+PCLG+GYVQKITARKDI +ME+LDNGKP
Sbjct: 181 CVPCLGIGYVQKITARKDIAVMEELDNGKP 197

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BLAST of CmoCh04G005260 vs. TrEMBL
Match: A9PJQ1_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 8.5e-67
Identity = 136/210 (64.76%), Postives = 157/210 (74.76%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATDAT 60
           M +++PTSLF PS PT  R +S      FR  C+AAGD S    F R   F S +     
Sbjct: 1   MLSISPTSLFLPSKPTFNRTRS------FR--CSAAGDLS----FPRWLQFTSAADASIG 60

Query: 61  GG-FRLGQEYDGGASS-GSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLP 120
           GG  R+GQE DG AS+ G   G G   SG  SV+ NA EKKWSR+RESYL D+ + LPLP
Sbjct: 61  GGSIRIGQELDGAASADGERKGFG-GNSGGSSVRVNAREKKWSRNRESYLADNEDALPLP 120

Query: 121 MTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCK 180
           MTYPDS PV PEEID+RL CDP+VEDC+EVVYEWTGKCRSCQGSGFVSYYNKRG+E+TCK
Sbjct: 121 MTYPDSKPVPPEEIDKRLSCDPEVEDCREVVYEWTGKCRSCQGSGFVSYYNKRGKEVTCK 180

Query: 181 CIPCLGVGYVQKITARKDIELMEDLDNGKP 209
           C+PCLG+GYVQKITARKDI +ME+LDNGKP
Sbjct: 181 CVPCLGIGYVQKITARKDIAVMEELDNGKP 197

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BLAST of CmoCh04G005260 vs. TrEMBL
Match: B9RYI8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813630 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.1e-65
Identity = 132/217 (60.83%), Postives = 159/217 (73.27%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATDAT 60
           M  +NP SLFFPS P+     S+    +  R  A+AGD    P+F R + F   SA D T
Sbjct: 1   MLPINPNSLFFPSKPS--HLLSLPSITTSHRCFASAGDLRHIPTFPRWW-FHFTSAAD-T 60

Query: 61  GGFRLGQEYDGGASSGSVDGV--------GRSGSGNGSVKANAMEKKWSRDRESYLVDSS 120
           G  R+GQE DG  SS   D          G  GSG+ S++ NA EKKWSR+RESYLVD+ 
Sbjct: 61  GSIRIGQESDGATSSPVADSSSSAGPQRRGLGGSGSSSIRVNAKEKKWSRNRESYLVDNE 120

Query: 121 EVLPLPMTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRG 180
           + LPLPMTYPDS PV+PEEID+RL+CDP+++DC+EVVYEWTGKCRSCQGSG+VSY+NKRG
Sbjct: 121 DALPLPMTYPDSKPVSPEEIDKRLRCDPEIQDCREVVYEWTGKCRSCQGSGYVSYFNKRG 180

Query: 181 REITCKCIPCLGVGYVQKITARKDIELMEDLDNGKPL 210
           +E  CKC+PCLG+GYVQKITARKDI +MEDLDNGKPL
Sbjct: 181 KETICKCVPCLGIGYVQKITARKDIGVMEDLDNGKPL 213

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BLAST of CmoCh04G005260 vs. TAIR10
Match: AT3G19220.1 (AT3G19220.1 protein disulfide isomerases)

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-49
Identity = 100/180 (55.56%), Postives = 116/180 (64.44%), Query Frame = 1


Query: 27  PSFRRSCAAAGDASVGPSFSRLFNFPSVSATDATGGFRLGQEYDGGASSGSVDGVGRSGS 86
           PS    C AA D  +G                   G RL +E D  + +     V  +  
Sbjct: 23  PSRSLRCRAAADIPLGD------------------GIRLPREADSTSDTARSRDVSVAAG 82

Query: 87  GNGS-VKANAMEKKWSRDRESYLVDSSEVLPLPMTYPDSSPVTPEEIDRRLQCDPQVEDC 146
           GNG   K       WS+  ESYLVD  + LPLPMTYPD+SPV+P+ IDRRLQCDP VEDC
Sbjct: 83  GNGEGAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVIDRRLQCDPVVEDC 142

Query: 147 KEVVYEWTGKCRSCQGSGFVSYYNKRGREITCKCIPCLGVGYVQKITARKDIELMEDLDN 206
           +EVVYEWTGKCRSCQGSG VSYY KRG+E+ CKCIPC G+GYVQKIT+R DIE+MEDLDN
Sbjct: 143 REVVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSRTDIEVMEDLDN 184

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BLAST of CmoCh04G005260 vs. NCBI nr
Match: gi|778680082|ref|XP_004140700.2| (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 1.7e-92
Identity = 174/212 (82.08%), Postives = 186/212 (87.74%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTAT--RQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATD 60
           MFA+NP+S FFPSNPT    RQ SIS   SFR S AA GDAS  PS SRLFNFPS+SATD
Sbjct: 1   MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATD 60

Query: 61  ATGGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLP 120
           ATGGF LGQ+YD GASS  +DG GR   GNG+VK NAMEKKWSRDRESYLVD S+VLPLP
Sbjct: 61  ATGGFSLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLP 120

Query: 121 MTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCK 180
           MTYPDSSPV+P+EIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREITCK
Sbjct: 121 MTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCK 180

Query: 181 CIPCLGVGYVQKITARKDIELMEDLD-NGKPL 210
           CIPCLG+GYVQKITARKDIELMEDLD NGKPL
Sbjct: 181 CIPCLGIGYVQKITARKDIELMEDLDNNGKPL 212

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BLAST of CmoCh04G005260 vs. NCBI nr
Match: gi|659112230|ref|XP_008456126.1| (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 2.2e-92
Identity = 171/205 (83.41%), Postives = 182/205 (88.78%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATDAT 60
           MFA+NP+SLFFPSNPT  RQ SIS   SFR   AA GDAS  PS SRLFNFPS+SATDAT
Sbjct: 1   MFAINPSSLFFPSNPTTPRQHSISPPSSFRLYGAATGDASPEPSISRLFNFPSLSATDAT 60

Query: 61  GGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLPMT 120
            GFRLGQ+YD GASS +VD  GR G GNG+VK NAMEKKWSRDRESYLVD S+VLPLPM 
Sbjct: 61  AGFRLGQDYDAGASSPAVDAPGRFGRGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLPMA 120

Query: 121 YPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCKCI 180
           YPDSSPV+P+EIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSG+VSYYNKRGREITCKCI
Sbjct: 121 YPDSSPVSPDEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCI 180

Query: 181 PCLGVGYVQKITARKDIELMEDLDN 206
           PCLG+GYVQKITARKDIELMEDLDN
Sbjct: 181 PCLGIGYVQKITARKDIELMEDLDN 205

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BLAST of CmoCh04G005260 vs. NCBI nr
Match: gi|702392382|ref|XP_010066023.1| (PREDICTED: protein disulfide-isomerase SCO2 [Eucalyptus grandis])

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 132/208 (63.46%), Postives = 154/208 (74.04%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATDAT 60
           MF +NP+S F    P+      ++  PS     A AGD   GP+F R   FP+ SA DA 
Sbjct: 46  MFPINPSSAFALPKPSTL----LAARPSLACRAAGAGDVPAGPAFPRWLQFPAASAGDAA 105

Query: 61  GGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLPMT 120
              R+G  +DGGA + +     R G G G VKANA EK+WSRDRESYL D  E LPLPMT
Sbjct: 106 ---RVGPNFDGGAVADAPAVARRGGGGTGGVKANAREKRWSRDRESYLTDDGEPLPLPMT 165

Query: 121 YPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCKCI 180
           YP++SPV+P+EID+RL+CDP VEDCKEVVYEWTGKCRSCQG+GFVSYYNKRGRE  CKC+
Sbjct: 166 YPNTSPVSPDEIDKRLRCDPVVEDCKEVVYEWTGKCRSCQGTGFVSYYNKRGRETICKCV 225

Query: 181 PCLGVGYVQKITARKDIELMEDLDNGKP 209
           PCLG+GYVQKITARKDIE+MEDLDNGKP
Sbjct: 226 PCLGIGYVQKITARKDIEVMEDLDNGKP 246

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BLAST of CmoCh04G005260 vs. NCBI nr
Match: gi|802563406|ref|XP_012066880.1| (PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas])

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-67
Identity = 140/222 (63.06%), Postives = 165/222 (74.32%), Query Frame = 1


Query: 1   MFAVNPTSLFF--------PSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFP 60
           M  +NPTSLFF        P +PTAT   + + S S R  C AAGD   GP+F R F F 
Sbjct: 1   MLPINPTSLFFCSKPSTLIPISPTAT---TTTTSTSHR--CFAAGDLRAGPTFPRWFQF- 60

Query: 61  SVSATDATGGFRLGQEYDGGASSGSVDGVGRS------GSGNGSVKANAMEKKWSRDRES 120
             SA DA G  R+GQE +G ASS + DG   +      G  NGSV+ NA EKKWSR+RES
Sbjct: 61  -TSAADA-GSIRIGQESEGPASSPTADGASIAPQRRGVGGSNGSVRVNAKEKKWSRNRES 120

Query: 121 YLVDSSEVLPLPMTYPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVS 180
           YL D+ +VLPLPMTYP+S PV  EEID+RL+CD +++DCKEVVYEWTGKCRSCQGSG+VS
Sbjct: 121 YLTDNEDVLPLPMTYPNSKPVPAEEIDKRLRCDAEIQDCKEVVYEWTGKCRSCQGSGYVS 180

Query: 181 YYNKRGREITCKCIPCLGVGYVQKITARKDIELMEDLDNGKP 209
           YYNKRG+EITCKC+PCLG+GYVQKITARKDI++MEDLDNGKP
Sbjct: 181 YYNKRGKEITCKCVPCLGIGYVQKITARKDIDVMEDLDNGKP 214

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BLAST of CmoCh04G005260 vs. NCBI nr
Match: gi|1009150198|ref|XP_015892891.1| (PREDICTED: protein disulfide-isomerase SCO2 [Ziziphus jujuba])

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-67
Identity = 130/208 (62.50%), Postives = 155/208 (74.52%), Query Frame = 1


Query: 1   MFAVNPTSLFFPSNPTATRQQSISLSPSFRRSCAAAGDASVGPSFSRLFNFPSVSATDAT 60
           MFA NP+SLFF   P  +      L  +FR   A++G+  +G  F R F +P  +   + 
Sbjct: 1   MFASNPSSLFFSYKPNFSPPPPFRLPVTFRCR-ASSGNIPLGLRFPRWFQYPFTADVASA 60

Query: 61  GGFRLGQEYDGGASSGSVDGVGRSGSGNGSVKANAMEKKWSRDRESYLVDSSEVLPLPMT 120
           GG R+G + +G A    +DG  R G   G +K NA EKKWSR+ ESYL D ++ LPLPMT
Sbjct: 61  GGIRIGSDSEGAAV---LDGAARRGDNGGGMKVNAKEKKWSRNGESYLADDNDALPLPMT 120

Query: 121 YPDSSPVTPEEIDRRLQCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGREITCKCI 180
           YPD+SP +P+EIDRRL+CDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRG+EI CKCI
Sbjct: 121 YPDTSPASPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGFVSYYNKRGKEIVCKCI 180

Query: 181 PCLGVGYVQKITARKDIELMEDLDNGKP 209
           PCLG+GYVQKITARKDIE+MEDLDNGKP
Sbjct: 181 PCLGIGYVQKITARKDIEVMEDLDNGKP 204

The following BLAST results are available for this feature:

BLAST of CmoCh04G005260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCO2_ARATH	1.3e-47	55.56	Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1	[more]

BLAST of CmoCh04G005260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6G9_CUCSA	1.2e-92	82.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207360 PE=4 SV=1	[more]
A0A067LE01_JATCU	7.7e-68	63.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01623 PE=4 SV=1	[more]
B9HS05_POPTR	8.5e-67	64.76	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10520g PE=4 SV=1	[more]
A9PJQ1_9ROSI	8.5e-67	64.76	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]
B9RYI8_RICCO	2.1e-65	60.83	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813630 PE=4 SV=1	[more]

BLAST of CmoCh04G005260 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19220.1	7.2e-49	55.56	protein disulfide isomerases	[more]

BLAST of CmoCh04G005260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680082\|ref\|XP_004140700.2\|	1.7e-92	82.08	PREDICTED: protein disulfide-isomerase SCO2 [Cucumis sativus]	[more]
gi\|659112230\|ref\|XP_008456126.1\|	2.2e-92	83.41	PREDICTED: protein disulfide-isomerase SCO2 [Cucumis melo]	[more]
gi\|702392382\|ref\|XP_010066023.1\|	2.9e-68	63.46	PREDICTED: protein disulfide-isomerase SCO2 [Eucalyptus grandis]	[more]
gi\|802563406\|ref\|XP_012066880.1\|	1.1e-67	63.06	PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]	[more]
gi\|1009150198\|ref\|XP_015892891.1\|	1.9e-67	62.50	PREDICTED: protein disulfide-isomerase SCO2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G005260.1	CmoCh04G005260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36035	FAMILY NOT NAMED	coord: 73..209 score: 7.5
None	No IPR available	PANTHER	PTHR36035:SF1	PROTEIN DISULFIDE-ISOMERASE SCO2	coord: 73..209 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G005260	CmaCh04G004890	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G005260	Cla013067	Watermelon (97103) v1	cmowmB697
CmoCh04G005260	MELO3C019509	Melon (DHL92) v3.5.1	cmomeB682
CmoCh04G005260	ClCG05G010000	Watermelon (Charleston Gray)	cmowcgB658
CmoCh04G005260	Cp4.1LG01g02250	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G005260	Carg08160	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G005260	Cucumber (Chinese Long) v3	cmocucB0814
CmoCh04G005260	Cucumber (Chinese Long) v3	cmocucB0910
CmoCh04G005260	Watermelon (97103) v2	cmowmbB717
CmoCh04G005260	Watermelon (97103) v2	cmowmbB735
CmoCh04G005260	Wax gourd	cmowgoB0849
CmoCh04G005260	Cucurbita moschata (Rifu)	cmocmoB125
CmoCh04G005260	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G005260	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh04G005260	Cucurbita moschata (Rifu)	cmocmoB477
CmoCh04G005260	Cucumber (Gy14) v1	cgycmoB0632
CmoCh04G005260	Cucumber (Gy14) v1	cgycmoB0687
CmoCh04G005260	Cucurbita maxima (Rimu)	cmacmoB156
CmoCh04G005260	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G005260	Cucurbita maxima (Rimu)	cmacmoB530
CmoCh04G005260	Wild cucumber (PI 183967)	cmocpiB698
CmoCh04G005260	Wild cucumber (PI 183967)	cmocpiB777
CmoCh04G005260	Cucumber (Chinese Long) v2	cmocuB687
CmoCh04G005260	Cucumber (Chinese Long) v2	cmocuB769
CmoCh04G005260	Melon (DHL92) v3.5.1	cmomeB665
CmoCh04G005260	Melon (DHL92) v3.5.1	cmomeB683
CmoCh04G005260	Melon (DHL92) v3.5.1	cmomeB703
CmoCh04G005260	Watermelon (Charleston Gray)	cmowcgB645
CmoCh04G005260	Watermelon (Charleston Gray)	cmowcgB660
CmoCh04G005260	Watermelon (97103) v1	cmowmB699
CmoCh04G005260	Watermelon (97103) v1	cmowmB721
CmoCh04G005260	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G005260	Cucurbita pepo (Zucchini)	cmocpeB703
CmoCh04G005260	Bottle gourd (USVL1VR-Ls)	cmolsiB627
CmoCh04G005260	Bottle gourd (USVL1VR-Ls)	cmolsiB650
CmoCh04G005260	Bottle gourd (USVL1VR-Ls)	cmolsiB683
CmoCh04G005260	Cucumber (Gy14) v2	cgybcmoB386
CmoCh04G005260	Cucumber (Gy14) v2	cgybcmoB949
CmoCh04G005260	Melon (DHL92) v3.6.1	cmomedB751
CmoCh04G005260	Melon (DHL92) v3.6.1	cmomedB774
CmoCh04G005260	Melon (DHL92) v3.6.1	cmomedB800
CmoCh04G005260	Silver-seed gourd	carcmoB0899