CmoCh04G003720 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Rho gtpase-activating protein
Location	Cmo_Chr04 : 1811697 .. 1817831 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACACTCGGTGAAATTTAATTTAATTTAATTTAGTTTTTTGGAGGGAGTCTTGGCATTTGGGGACCTCATGATCTTCAGCTTCTGCAAGCTGAGCGCGGTTTTTTGGCTTTTCGGAATCGTGGGTACTTAAGTACAATTTTCTTCTTCGGTTTTCTCGGCAAAGTTCTTGTGCGATTCTAGGGATTTTCCTGCTTTGTTAGTACTCGATTACGACTGCGAGGTAGAATTCTTTACTGGTAGAAATTTCTTTATGTTTGATCAATGTAAACAGTTGTGATTGATTATCGTTAGTTTTCTTTTCTCGAGCTCGTGGATTTTTTTTTTTTAATGTTATTTCTCTTTATTCTGCCACTCTCTGATTTTTTTCTTAATTTATTCTGTTGTCGGGAAATTTAGCAGAGAATTCGATTTTGAAATAATTTTGTGATGTTATTTGGACGATCTTGTGCGGTAGTCAATTTTTATGTTTAAGGTTGAGTTGTGTTTCATTGACAGTGGATGGTTCCTAGATTTTTGCATCGGATATGACTAGCTTGTTTGTTTTATCAATTTTACTGGGATGAGGAAAGAAGTGAAATGTTTAAAGAGTTTTAGCGGATGACTTTATTAGTTTTTTCACTACTTTTTGCTAGGAAAGGATAGAAAATGAAATATAATTGAGAGTATTGAGACAGTTGATGATAGTGTTTAGTTGAGAATGAACTGAATTATAGTAATTAAGTTTTTAGTCATGGATGTCAGATTCCTTATCATTCGGGGTTTCTTTTGAACTGAATTTAATAGTGTAAGGGAAAGTATGAATCGGTGCTATTATTTTGAACTTCGATGTATTGTTCTGCAACAGGCATAATCAATACACAAATTTAAACTGACGCTGGTTTCAAAGTTGGTCCAATGCCTTCTGTTAATACTTCAGAGTGGAAGGAAAAGGCTGGTGGTTTCTTTTCTTCATCAGGTACTCTTTTCAGTACTTAAATGAATATGATTTTGTTGTTTGGTCTCCTGCATTTCTAATTCTCATGTTTTCTGTCCTATAATGATATATTGCAGGAGTAAAGCTGAAACAAGCTGGACAATCAGCTGGAACTTTCGTTGGGGGAGTTGCAAAGGATGCAAAAGGAAATGCTGCTGACGTGGTTGAACGAGTTGGTTCTGTAGTCAAGAGCGGATTGGCTACTACTGGCACATTCTTGAGGAAAGGCATGTCAGAGACAAAGGAGAAAGTTGTCGTGGGGAAAGATAAAGTTGAAGAGGTAATTTTGGCGAAACTTTTCTTTTCCATTTTTATGTTACATGAAATGATATTTCCTTTCATATTCGACTTGTGTATGTTTCTTAGTTTGTAAAAAAGACTGCACAAAAGTACAATACAATTTTGACAGTTGAACGAAGGCAGAAGGTAATCTTCATCCTATACAGTTGACAATTCGCCTCTCTTTGCATATTATACCCGTGATCTAACTCATGTTTGTTTACAATTATGCAGGAGGTTGCCAGTACTGATGGTAAGTTTCTGAATTTTGTCCATTTAGTTTATTTAATGTTATCGAGTAATTTACACGTTTGAGCTCTCTGCAAACTTTTCTTGCATGGGTCTGTATTTATTTTTTATTTTGATATGAATCTCTAGTATTTGGAGTTCCAATTGAGGTAACCGTACAAAGACAACAGTCAAGCAGGATCATTCCACATATTTTGGTCAGATGTGCTGAATATCTCGACTCGTCAGGTACTGGATTTCAAAATTACTTCCATACATGAACGCGTTTATACATTTTTTTTTTTTTTTGCATGTGACGAAAATTCCATCGAACATTTGCCTTTGCTTATCCTTTATTTTTTTTAGGGCTAAACTCACCATGGCTATTTAAGTCTGACGGAGATAAAAGGGTTCTTCAGCAGTTGGTGTCAATGTATAATCAAGGTAAAGGAAGTAGTTTATGCGGTTAAGTTTTGTCTTTTGTGATCTACTTTCAATAACTTCACAATGTGTGTCGGTTGCATACATTTTTCAGATGCCAATGCCCCAGTACCTGAAGGTACAAATCCAGTTGATATAGCAGCTCTAGCTAAATGTTACCTGGCCAGTTTTCCTGAGCCACTAGTCACACTTAAGCTTTACAATGAGATCAGGAGTGCACGTACAAGCATTACTGACCTGCGAAACATTTTAAAGAAACTTCCTAATGTGAACTACATGACCTTAGAGTTTATGACTGCACTATTTCTCCGCATTAGCCAAACAGCACTGCTTTATAAGGCAGGGTCTCTATCTCTCTCTTTGTGCATGCATACATGTTCGTTCATTTCTGTTGCATTCTTGTTTATATAGGACTGTTTATGAATTTGAGCTGGCATGTAAGAATATATTATGTTTACTGGTCCTCAACAAGGCTGGTGCTCTCTCTTGTGTGCACGCTTACACATAGATCTTTTTTTTTTTTTGTTTATTTAGGTCCATTTATGAGTTTAAGTTGGCTTGTAAGAACACATTCATGCAGTTTTTGAACTAACTTGATGTGATGACCTCTGCTTTATTACAAACTTCAAACCTTGAAAAAGTCACTTGGTATGCATTTATCAGAGGTTGTCTTGAATTAACCATCGTCATAAAGGATTATTTTATATGCTACTTGATATCGAAGCACTACATACATTTTAGATAGAGGAGCTTGCGTGCAAGGCTGCAAATTTTTACATGTTCGCAAATAACTTATTAGTGCAACATCATGACCCATATATTTATGTGTTCAAATATTTCAGAACCTATATCTCATAATCTTTCTCGTGATCAACATGATATACTGTCATGCGTAGCCAATGATGTATGCCTTTGATGGTTTGGGTATTTTGGCTATTATTTTGCCTGAGACGATTTATGGATGTCTCTTGAGGGTTCTATGCACAAATTTCTAAAGCAAAGCACGTGCTGTCCAGGACACTCTAATTGTAGCTGATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTGCTAAATCTTTTCTGATGTGTAATTGCTAATTTTCTGCATTGAAATTTTGACCTTTCTTGCCTAACTTTTGGAGTCATCAATCTTCTCATATACTCAAACGTAAATAATCCATTCATGTTCTTTGTTGTGTTGCTAATGTCTGTATTCCTTCAATAGATGGATGCTCGTAGCCTCGCTATGGAGATGACTCCTATAATAATGTGGCAAACGGACAGGCGGCCAGAATTCTATCGGGAATATTGGGATTATCATTCTGAAAATTCTTCTGCAAAGTCCTCGAATAATACATCACCTACTTACAGTGCATGGGACATGCTTTCAGGTAACTTGGCCAATCCTTGATATTTGATTGTTTGCTATGTGCTTTATAATTGGAAATAACTCTAGATTTTTCCTCTTTTGGAGTGGACATTTCAGTCGCATGCTTTGGAATGAGAATGATGGTGATGAGTTATATTATCCATTTAATATTGATTGACAATCTGAAGTGTGTGAAAAGACCTACCACCTTTTTATGCAGATAATTCTATCTAGTTAATAAAATTTATTATGATTACTGTCTTAGATGTTCAACTGAGGAAATGTGAAAGGTATTAAGTAGTGAGGTTTGGGCATATTCCAACCTTTACCCTGCACTTTAGTAGCTTTGAGTAGTTTACTGTATGTGGGCTTGCTGTTAATTCTTTGTTTAGGTAGTGCACTGTTTTTAGTAGTTAGTGGTTAATTAGAAGCTCTTATAAAGAATACGATGCTCTGTCTTTGCAACCCGTACTTTTAATTCATATAATAAAGCTCTCTTTGAACATTCTTGCGGCGAATCTTTAGGCTGCATCTGTATAAGAAGTGAGTAGGGACATTTTGAACCATTTAACCTTTAATGTTCTGTTCATTAAGCTATTATTCATGGTGCAATATTGAAACCTCAACACATATATTGTTAAGAAGGAAAATAATTTTAAATATTGTGCAAAATTATCCTCGATTGTCCTTTTGATCGTCCCCCTGGATTAATTTTCACTATTTTTGTTTTTGTGCTTCAGAAGAGAGTGATGATACAGATGCTTCCTCAGACATTCCCTTGGATGATGCCTTGCCAGTTGACTATAGTGCCATCGAGGTCATTCAGTGCCTCATAGAACATCATAAGGAAATTTTTACTGATGCCAATTAAACAATTTGGAGATAAATCAGCAGCAGTTATTTCCTCGGGCGACCTTTATTCTTGGATGAATTTTGATACAAGTCTATCTCTAGCGACAGGTCTATATCTGAGAGTTATTTTCTTAGTTCGATTGGCCAGGTTGGTAAATTAAACTTAAAATTTGTTCGGATATGGACAGCTAGCACAGTGAAAGAAACTACAGTGTGATGCATAAAATGGAGCGCGTTTAGTTGTAATAACCTTCCAGGATTTACTAGTTGATCTGAAGTTAGATATCAGTTGTACATACAACTAATACTGCTGTTATATTTAGCGTGTGAATAATAATTCTATTTACAATATGCCAGTTGGACATAGTTCGTTCTTCTTCGTATAATATTTGGGCCACCCAACTTAGTATTACTCTCACCCAAGCACGCTTAATTGCGGACTTCTGATGAAATCTGGTGCATTAGTGCCAGTATGATCGCACCCTTAACTACGTTGAACACCTCGGTTGTTGATAAGAGATATACTCCAGATACTTTGATAATAGCACCCAGGAAGTAAGCTACACAATTCAACCAGAGACACCGAGGAAAATAGCAAACTAATAAACTATGACAGGGATGTATTGTCTATTGAGCTAGTGGAGCTTGGATATCCATGTTTCTGTTAAAATGAAGGGGGAGGTTGATAAAAAAAGTCAAACAAATCAGCTGAGAAATCGTCAAAGCAATCAACAACTGTTGCATGGTAAGGGTTTCCATTCTCAACTTCTAAACTACTTTCTGCTTTCATATCTTGTTCTTTAGGCATTGAACTGCTCATGAACTGCAGGGAGCTTTCTATTTTTGAAGTCTGGCCTGGCTCAAGCCCGTCTTGCAAATTGGAAGCAATGTGGTGTGGCGCCAGTCCGAGGCAGTCTGGAACCATTCCGATCCCTTGTGAGGATTGGGTGATTTGGGAGATGCAACAATGAGGAAAAGGGTCAAAGGGTGCTAGCATGTGTATGGATGGAGTTCCAAATATTTGATTCTCAGTTTCCATAGCTATCATATTTGACTGTACTGATAACGAT

mRNA sequence

GCACACTCGGTGAAATTTAATTTAATTTAATTTAGTTTTTTGGAGGGAGTCTTGGCATTTGGGGACCTCATGATCTTCAGCTTCTGCAAGCTGAGCGCGGTTTTTTGGCTTTTCGGAATCGTGGGTACTTAAGTACAATTTTCTTCTTCGGTTTTCTCGGCAAAGTTCTTGTGCGATTCTAGGGATTTTCCTGCTTTGTTAGTACTCGATTACGACTGCGAGGCATAATCAATACACAAATTTAAACTGACGCTGGTTTCAAAGTTGGTCCAATGCCTTCTGTTAATACTTCAGAGTGGAAGGAAAAGGCTGGTGGTTTCTTTTCTTCATCAGGAGTAAAGCTGAAACAAGCTGGACAATCAGCTGGAACTTTCGTTGGGGGAGTTGCAAAGGATGCAAAAGGAAATGCTGCTGACGTGGTTGAACGAGTTGGTTCTGTAGTCAAGAGCGGATTGGCTACTACTGGCACATTCTTGAGGAAAGGCATGTCAGAGACAAAGGAGAAAGTTGTCGTGGGGAAAGATAAAGTTGAAGAGTTTGTAAAAAAGACTGCACAAAAGTACAATACAATTTTGACAGTTGAACGAAGGCAGAAGGAGGTTGCCAGTACTGATGTATTTGGAGTTCCAATTGAGGTAACCGTACAAAGACAACAGTCAAGCAGGATCATTCCACATATTTTGGTCAGATGTGCTGAATATCTCGACTCGTCAGGGCTAAACTCACCATGGCTATTTAAGTCTGACGGAGATAAAAGGGTTCTTCAGCAGTTGGTGTCAATGTATAATCAAGATGCCAATGCCCCAGTACCTGAAGGTACAAATCCAGTTGATATAGCAGCTCTAGCTAAATGTTACCTGGCCAGTTTTCCTGAGCCACTAGTCACACTTAAGCTTTACAATGAGATCAGGAGTGCACGTACAAGCATTACTGACCTGCGAAACATTTTAAAGAAACTTCCTAATGTGAACTACATGACCTTAGAGTTTATGACTGCACTATTTCTCCGCATTAGCCAAACAGCACTGCTTTATAAGATGGATGCTCGTAGCCTCGCTATGGAGATGACTCCTATAATAATGTGGCAAACGGACAGGCGGCCAGAATTCTATCGGGAATATTGGGATTATCATTCTGAAAATTCTTCTGCAAAGTCCTCGAATAATACATCACCTACTTACAGTGCATGGGACATGCTTTCAGAAGAGAGTGATGATACAGATGCTTCCTCAGACATTCCCTTGGATGATGCCTTGCCAGTTGACTATAGTGCCATCGAGGTCATTCAGTGCCTCATAGAACATCATAAGGAAATTTTTACTGATGCCAATTAAACAATTTGGAGATAAATCAGCAGCAGTTATTTCCTCGGGCGACCTTTATTCTTGGATGAATTTTGATACAAGTCTATCTCTAGCGACAGGTCTATATCTGAGAGTTATTTTCTTAGTTCGATTGGCCAGGTTGGTAAATTAAACTTAAAATTTGTTCGGATATGGACAGCTAGCACAGTGAAAGAAACTACAGTGTGATGCATAAAATGGAGCGCGTTTAGTTGTAATAACCTTCCAGGATTTACTAGTTGATCTGAAGTTAGATATCAGTTGTACATACAACTAATACTGCTGTTATATTTAGCGTGTGAATAATAATTCTATTTACAATATGCCAGTTGGACATAGTTCGTTCTTCTTCGTATAATATTTGGGCCACCCAACTTAGTATTACTCTCACCCAAGCACGCTTAATTGCGGACTTCTGATGAAATCTGGTGCATTAGTGCCAGTATGATCGCACCCTTAACTACGTTGAACACCTCGGTTGTTGATAAGAGATATACTCCAGATACTTTGATAATAGCACCCAGGAAGTAAGCTACACAATTCAACCAGAGACACCGAGGAAAATAGCAAACTAATAAACTATGACAGGGATGTATTGTCTATTGAGCTAGTGGAGCTTGGATATCCATGTTTCTGTTAAAATGAAGGGGGAGGTTGATAAAAAAAGTCAAACAAATCAGCTGAGAAATCGTCAAAGCAATCAACAACTGTTGCATGGGAGCTTTCTATTTTTGAAGTCTGGCCTGGCTCAAGCCCGTCTTGCAAATTGGAAGCAATGTGGTGTGGCGCCAGTCCGAGGCAGTCTGGAACCATTCCGATCCCTTGTGAGGATTGGGTGATTTGGGAGATGCAACAATGAGGAAAAGGGTCAAAGGGTGCTAGCATGTGTATGGATGGAGTTCCAAATATTTGATTCTCAGTTTCCATAGCTATCATATTTGACTGTACTGATAACGAT

Coding sequence (CDS)

ATGCCTTCTGTTAATACTTCAGAGTGGAAGGAAAAGGCTGGTGGTTTCTTTTCTTCATCAGGAGTAAAGCTGAAACAAGCTGGACAATCAGCTGGAACTTTCGTTGGGGGAGTTGCAAAGGATGCAAAAGGAAATGCTGCTGACGTGGTTGAACGAGTTGGTTCTGTAGTCAAGAGCGGATTGGCTACTACTGGCACATTCTTGAGGAAAGGCATGTCAGAGACAAAGGAGAAAGTTGTCGTGGGGAAAGATAAAGTTGAAGAGTTTGTAAAAAAGACTGCACAAAAGTACAATACAATTTTGACAGTTGAACGAAGGCAGAAGGAGGTTGCCAGTACTGATGTATTTGGAGTTCCAATTGAGGTAACCGTACAAAGACAACAGTCAAGCAGGATCATTCCACATATTTTGGTCAGATGTGCTGAATATCTCGACTCGTCAGGGCTAAACTCACCATGGCTATTTAAGTCTGACGGAGATAAAAGGGTTCTTCAGCAGTTGGTGTCAATGTATAATCAAGATGCCAATGCCCCAGTACCTGAAGGTACAAATCCAGTTGATATAGCAGCTCTAGCTAAATGTTACCTGGCCAGTTTTCCTGAGCCACTAGTCACACTTAAGCTTTACAATGAGATCAGGAGTGCACGTACAAGCATTACTGACCTGCGAAACATTTTAAAGAAACTTCCTAATGTGAACTACATGACCTTAGAGTTTATGACTGCACTATTTCTCCGCATTAGCCAAACAGCACTGCTTTATAAGATGGATGCTCGTAGCCTCGCTATGGAGATGACTCCTATAATAATGTGGCAAACGGACAGGCGGCCAGAATTCTATCGGGAATATTGGGATTATCATTCTGAAAATTCTTCTGCAAAGTCCTCGAATAATACATCACCTACTTACAGTGCATGGGACATGCTTTCAGAAGAGAGTGATGATACAGATGCTTCCTCAGACATTCCCTTGGATGATGCCTTGCCAGTTGACTATAGTGCCATCGAGGTCATTCAGTGCCTCATAGAACATCATAAGGAAATTTTTACTGATGCCAATTAA

Homology

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BLAST of CmoCh04G003720 vs. Swiss-Prot
Match: RGAPX_ARATH (Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana GN=At5g61530 PE=1 SV=2)

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-114
Identity = 229/373 (61.39%), Postives = 277/373 (74.26%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS+ + +W+E+  GFFSSSG KL++AGQ+AG+FVG VAKDAK N ADV ERVGS+ KS 
Sbjct: 1   MPSLISQQWQERTSGFFSSSGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTGTF+RKG++ETKEKV VGK KVEE  KKTAQK  TI
Sbjct: 61  WAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VAS+DVFGV IE+TVQRQ+SSR IP ILV+CA+YL  +GLNSP LFK++G
Sbjct: 121 LTDIERWQKGVASSDVFGVAIEITVQRQESSRPIPLILVKCADYLILTGLNSPNLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           D++++QQLVS YNQD  A +PEG NPVD+AAL K YLAS P PL T +LYNEI+ AR+SI
Sbjct: 181 DRKLIQQLVSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             +R  L+KL NVNY TLEF+TAL LR+SQ +LL KMD+ SLAMEM P+IMW+ D RPE 
Sbjct: 241 HRMRQSLQKLSNVNYNTLEFITALLLRVSQKSLLNKMDSHSLAMEMAPVIMWREDNRPES 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 353
           YREYW     + S K SN+   T + WD+LS+E +  DASS IPLDD   VD+ A+EV+Q
Sbjct: 301 YREYW--RRPSRSPKKSNDFE-TATPWDLLSDEGEGPDASSSIPLDDIARVDFGAVEVVQ 360

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BLAST of CmoCh04G003720 vs. Swiss-Prot
Match: GACJJ_DICDI (Rho GTPase-activating protein gacJJ OS=Dictyostelium discoideum GN=gacJJ PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-11
Identity = 43/160 (26.88%), Postives = 82/160 (51.25%), Query Frame = 1


Query: 115 VFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDGDKRVLQQLVSMYNQD 174
           VFGVPIE TV        IP ++++  +Y++   ++   +F+  G    ++Q  + Y++ 
Sbjct: 425 VFGVPIEKTVSGNNE---IPAVVLQTIDYIEKKAMDIVGIFRLSGSVLTIEQWKAKYDKG 484

Query: 175 ANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSITD-------LRNILK 234
               + +  +P  +A L K YL   P+PL+T + Y+   +A+ SI D       +++++K
Sbjct: 485 EKVDLFQEVDPHAVAGLLKLYLRELPDPLLTYEKYDNFIAAQ-SIDDFPSRIKLIKHLVK 544

Query: 235 KLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTP 268
            LP VNY  L ++ A   +++  +   KM   +L+    P
Sbjct: 545 SLPPVNYAVLSYLMAFVGKVATHSAANKMQVHNLSTVFGP 580

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BLAST of CmoCh04G003720 vs. Swiss-Prot
Match: RHG24_RAT (Rho GTPase-activating protein 24 OS=Rattus norvegicus GN=Arhgap24 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10
Identity = 42/166 (25.30%), Postives = 79/166 (47.59%), Query Frame = 1


Query: 115 VFGVPIEVTV--QRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDGDKRVLQQLVSMYN 174
           +FG  +E TV  +++  +R+ P ++ +C +++   GL    LF+  G   ++++L   ++
Sbjct: 131 IFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFD 190

Query: 175 QDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSART--------SITDLRN 234
                     T+   +A+L K YL   PEP+V    Y +  S  T         + +L  
Sbjct: 191 CGEKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELTK 250

Query: 235 ILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIM 271
            +K LP VNY  L+++      +   + + KM A++LA    P I+
Sbjct: 251 QVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSAQNLATVFGPNIL 296

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BLAST of CmoCh04G003720 vs. Swiss-Prot
Match: RHG24_MOUSE (Rho GTPase-activating protein 24 OS=Mus musculus GN=Arhgap24 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10
Identity = 42/166 (25.30%), Postives = 79/166 (47.59%), Query Frame = 1


Query: 115 VFGVPIEVTV--QRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDGDKRVLQQLVSMYN 174
           +FG  +E TV  +++  +R+ P ++ +C +++   GL    LF+  G   ++++L   ++
Sbjct: 130 IFGQKLEDTVRYEKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFD 189

Query: 175 QDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSART--------SITDLRN 234
                     T+   +A+L K YL   PEP+V    Y +  S  T         + +L  
Sbjct: 190 CGEKPSFDSNTDVHTVASLLKLYLRELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELMK 249

Query: 235 ILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIM 271
            +K LP VNY  L+++      +   + + KM A++LA    P I+
Sbjct: 250 QVKSLPVVNYNLLKYICRFLDEVQSYSGVNKMSAQNLATVFGPNIL 295

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BLAST of CmoCh04G003720 vs. Swiss-Prot
Match: RG68F_DROME (Rho GTPase-activating protein 68F OS=Drosophila melanogaster GN=RhoGAP68F PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.6e-10
Identity = 46/176 (26.14%), Postives = 85/176 (48.30%), Query Frame = 1


Query: 105 RRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSG-LNSPWLFKSDGDKRV 164
           ++Q ++A+T  FGVP++  V        IP I+ +C + L  +G +++  +F+  G+   
Sbjct: 263 QQQHKMATTHQFGVPLKFIVMNSPCLNSIPPIVRKCVDSLSITGVIDTEGIFRRSGNHSE 322

Query: 165 LQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEI--------RSA 224
           +  L    N+  +  + +  N   IA L K +L    EPL+T +LY ++           
Sbjct: 323 IMALKERVNRGEDVDL-KSVNVHVIAGLLKSFLRDLAEPLLTFELYEDVTGFLDWPKEER 382

Query: 225 RTSITDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMW 272
             ++T L  I +KLP  NY   +++    +R+     L KM + +LA+   P  +W
Sbjct: 383 SRNVTQL--IREKLPEENYELFKYIVEFLVRVMDCEDLNKMTSSNLAIVFGPNFLW 435

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BLAST of CmoCh04G003720 vs. TrEMBL
Match: A0A0A0KXL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022930 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 2.0e-153
Identity = 290/374 (77.54%), Postives = 316/374 (84.49%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MP+VN+S+W+EKA GFFSSSGVKLK+AG SAG FV  VAKDAKGNAADV ERVG++ KS 
Sbjct: 5   MPTVNSSQWQEKASGFFSSSGVKLKEAGHSAGNFVEEVAKDAKGNAADVAERVGTLFKSR 64

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTGTF RKG+SETK+KVVVGK KVEE  KKTAQK  TI
Sbjct: 65  WALLQQPATRHAVQERLISAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTI 124

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGV IEVTVQ+QQSSR+IPHILVRCA+YL  SGLNSPWLFKSDG
Sbjct: 125 LTDIERWQKGVASTDVFGVSIEVTVQKQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDG 184

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+VLQQLVSMYNQD NAP+PEGTNPVD+AALAKCYLAS PEPLVT +LYNEIR ARTSI
Sbjct: 185 DKKVLQQLVSMYNQDPNAPLPEGTNPVDVAALAKCYLASLPEPLVTFELYNEIRGARTSI 244

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             LRNI KKLPNVNYMTLEF TAL LR+SQ ALL KMDARSL+MEMTPIIMWQ DRRPEF
Sbjct: 245 NALRNIFKKLPNVNYMTLEFTTALLLRVSQKALLNKMDARSLSMEMTPIIMWQNDRRPEF 304

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YREYWDYHS++SSAKS NNT PTYSAWDMLSEESDDTDASS IPLDD +PVD++A+EV+Q
Sbjct: 305 YREYWDYHSKSSSAKSLNNTPPTYSAWDMLSEESDDTDASSHIPLDDGVPVDFNAVEVVQ 364

[Close]

BLAST of CmoCh04G003720 vs. TrEMBL
Match: A0A0B0NPG4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03900 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 9.5e-127
Identity = 246/374 (65.78%), Postives = 294/374 (78.61%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVK-- 60
           MPS  + +W+EKA GFFSSSGVKLK+A Q+AGTFVG VAKDAKGN  DV ERVGS+VK  
Sbjct: 1   MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNR 60

Query: 61  ------------------SGLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                             S  ATTGTFLRKG++ TK++VVVGK KVEE  KKTAQK  TI
Sbjct: 61  WAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDRVVVGKTKVEEVAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGVPIEVTVQRQQ+ + IP ILVRCA+YL  SG+NS +LFK++G
Sbjct: 121 LTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+V++QLVS YNQD NA +PEG NP+D+AALAK Y+AS PEPL T +LY+EI+SAR+SI
Sbjct: 181 DKKVIEQLVSAYNQDLNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             +RN+LK LP+VNYMTLEF+TAL LR+SQ ++L KMDARSLAMEM P+IMWQ DR+PE 
Sbjct: 241 HAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKMDARSLAMEMAPVIMWQKDRKPES 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR+YW  H   S +K S +++PTYSAWDML ++ +D DASS IPLDD +PVD+ AIEVIQ
Sbjct: 301 YRKYWS-HPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQ 360

[Close]

BLAST of CmoCh04G003720 vs. TrEMBL
Match: U5GL40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s24160g PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 1.6e-126
Identity = 244/374 (65.24%), Postives = 295/374 (78.88%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS  + +W+EKA GFFS+SGVKLK+AGQSAGTFVG VAKDAKGN ADV E+VGS VK+ 
Sbjct: 1   MPSAVSPQWQEKATGFFSTSGVKLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTG F RKG+SETK+KV VGK KVEE  KKTAQK  TI
Sbjct: 61  WAILREPSTRHAMQERLITAAATTGMFFRKGISETKDKVTVGKTKVEEVAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGVPIEVTVQRQ+ S+++PHILV+CA+YL  SGLNS  LFK++G
Sbjct: 121 LTDIERWQKGVASTDVFGVPIEVTVQRQEFSKLVPHILVKCADYLILSGLNSVDLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+V+QQLVS+YNQD+NA +PEG NP+D+A LAKCYLAS PEPL T +LY+EI+ AR+SI
Sbjct: 181 DKKVIQQLVSLYNQDSNASLPEGLNPIDVAFLAKCYLASLPEPLTTFELYDEIKGARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             ++NILKKLP VNYMTLEF+TAL LR+SQ +LL KMDAR++A EM P+IMWQ +R+PE 
Sbjct: 241 HVMKNILKKLPAVNYMTLEFITALLLRVSQKSLLNKMDARAIATEMAPVIMWQKERKPET 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR YW+ +   S +K + + +PTYSAWDMLSEES+D DASS IPLDDA+P D+ AI+++Q
Sbjct: 301 YRSYWN-NLSRSPSKKNMDPAPTYSAWDMLSEESEDMDASSLIPLDDAMPTDFGAIDIVQ 360

[Close]

BLAST of CmoCh04G003720 vs. TrEMBL
Match: A0A067JSD0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26285 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.8e-126
Identity = 243/374 (64.97%), Postives = 290/374 (77.54%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS  + +W+EKA  FFSSSG KLK+AGQSAGT+VGGVAKDA+GN AD  ER GS VKS 
Sbjct: 1   MPSAGSPQWQEKATVFFSSSGTKLKEAGQSAGTYVGGVAKDARGNVADAAERFGSAVKSR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTG FLRKG+S+TK+KV VGK KVEE  KKTAQK  TI
Sbjct: 61  WAFLREPSTRHVLQENLITAAATTGMFLRKGLSDTKDKVAVGKTKVEEAAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           +T +ER QK +ASTDVFGVPIEVTVQRQ+SS ++PHILV+CA+YL  SGLNS  LFK++G
Sbjct: 121 ITDIERWQKGIASTDVFGVPIEVTVQRQRSSSLVPHILVKCADYLILSGLNSMDLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           +K+V+Q LVS+YNQD+NA +PEG NP+D+AAL KCYLAS PEPL T +LYNEI+ AR+SI
Sbjct: 181 EKKVIQHLVSVYNQDSNASLPEGVNPLDVAALIKCYLASLPEPLTTFELYNEIKGARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             ++NILKKLP VNYMTLE +TAL LR+SQ +LL KMDARSLAME+ P++MWQ +++PEF
Sbjct: 241 YAMKNILKKLPTVNYMTLELITALLLRVSQKSLLNKMDARSLAMEIAPVVMWQKEQKPEF 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR+YW   S N   K S + +P YSAWDMLS+E +D DASS IPLDD  PVD+SAIEVIQ
Sbjct: 301 YRQYWSQASRN-PPKRSRDPAPNYSAWDMLSDEGEDLDASSPIPLDDGTPVDFSAIEVIQ 360

[Close]

BLAST of CmoCh04G003720 vs. TrEMBL
Match: A0A0D2TA56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G215000 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.0e-125
Identity = 244/374 (65.24%), Postives = 294/374 (78.61%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS  + +W+EKA GFFSSSGVKLK+A Q+AGTFVG VAKDAKGN  DV ERVGS+VKS 
Sbjct: 1   MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKSR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTGTFLRKG++ TK++VVVGK KVEE  KKTAQK  TI
Sbjct: 61  WAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDRVVVGKTKVEEVAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGVPIEVTVQRQQ+ + IP ILV+CA+YL  SG+NS +LFK++G
Sbjct: 121 LTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVKCADYLILSGINSQYLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+V++QLVS YNQD NA +PEG NP+D+AALAK Y+AS PEPL T +LY+EI+SAR+SI
Sbjct: 181 DKKVIEQLVSAYNQDFNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             +RN+LK LP+VNYMTLEF+TAL LR+SQ ++L KMDARSLA+EM P+IMWQ DR+PE 
Sbjct: 241 HAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKMDARSLALEMAPVIMWQKDRKPES 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR+YW  H   S +K S +++PTYSAWDML ++ +D DASS IPLDD +PVD+ AIEVIQ
Sbjct: 301 YRKYWS-HPLKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQ 360

[Close]

BLAST of CmoCh04G003720 vs. TAIR10
Match: AT5G61530.1 (AT5G61530.1 small G protein family protein / RhoGAP family protein)

HSP 1 Score: 414.1 bits (1063), Expect = 8.8e-116
Identity = 229/373 (61.39%), Postives = 277/373 (74.26%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS+ + +W+E+  GFFSSSG KL++AGQ+AG+FVG VAKDAK N ADV ERVGS+ KS 
Sbjct: 1   MPSLISQQWQERTSGFFSSSGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTGTF+RKG++ETKEKV VGK KVEE  KKTAQK  TI
Sbjct: 61  WAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VAS+DVFGV IE+TVQRQ+SSR IP ILV+CA+YL  +GLNSP LFK++G
Sbjct: 121 LTDIERWQKGVASSDVFGVAIEITVQRQESSRPIPLILVKCADYLILTGLNSPNLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           D++++QQLVS YNQD  A +PEG NPVD+AAL K YLAS P PL T +LYNEI+ AR+SI
Sbjct: 181 DRKLIQQLVSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             +R  L+KL NVNY TLEF+TAL LR+SQ +LL KMD+ SLAMEM P+IMW+ D RPE 
Sbjct: 241 HRMRQSLQKLSNVNYNTLEFITALLLRVSQKSLLNKMDSHSLAMEMAPVIMWREDNRPES 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 353
           YREYW     + S K SN+   T + WD+LS+E +  DASS IPLDD   VD+ A+EV+Q
Sbjct: 301 YREYW--RRPSRSPKKSNDFE-TATPWDLLSDEGEGPDASSSIPLDDIARVDFGAVEVVQ 360

[Close]

BLAST of CmoCh04G003720 vs. NCBI nr
Match: gi|449458339|ref|XP_004146905.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis sativus])

HSP 1 Score: 550.1 bits (1416), Expect = 2.9e-153
Identity = 290/374 (77.54%), Postives = 316/374 (84.49%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MP+VN+S+W+EKA GFFSSSGVKLK+AG SAG FV  VAKDAKGNAADV ERVG++ KS 
Sbjct: 5   MPTVNSSQWQEKASGFFSSSGVKLKEAGHSAGNFVEEVAKDAKGNAADVAERVGTLFKSR 64

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTGTF RKG+SETK+KVVVGK KVEE  KKTAQK  TI
Sbjct: 65  WALLQQPATRHAVQERLISAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTI 124

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGV IEVTVQ+QQSSR+IPHILVRCA+YL  SGLNSPWLFKSDG
Sbjct: 125 LTDIERWQKGVASTDVFGVSIEVTVQKQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDG 184

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+VLQQLVSMYNQD NAP+PEGTNPVD+AALAKCYLAS PEPLVT +LYNEIR ARTSI
Sbjct: 185 DKKVLQQLVSMYNQDPNAPLPEGTNPVDVAALAKCYLASLPEPLVTFELYNEIRGARTSI 244

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             LRNI KKLPNVNYMTLEF TAL LR+SQ ALL KMDARSL+MEMTPIIMWQ DRRPEF
Sbjct: 245 NALRNIFKKLPNVNYMTLEFTTALLLRVSQKALLNKMDARSLSMEMTPIIMWQNDRRPEF 304

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YREYWDYHS++SSAKS NNT PTYSAWDMLSEESDDTDASS IPLDD +PVD++A+EV+Q
Sbjct: 305 YREYWDYHSKSSSAKSLNNTPPTYSAWDMLSEESDDTDASSHIPLDDGVPVDFNAVEVVQ 364

[Close]

BLAST of CmoCh04G003720 vs. NCBI nr
Match: gi|659107846|ref|XP_008453890.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis melo])

HSP 1 Score: 541.2 bits (1393), Expect = 1.4e-150
Identity = 288/374 (77.01%), Postives = 311/374 (83.16%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MP+VN+S+W+EKA GFF  +GVKLK+AG SAG FV  VAKDAKGNAADV ERVGS+ KS 
Sbjct: 5   MPTVNSSQWQEKASGFFQIAGVKLKEAGHSAGNFVEEVAKDAKGNAADVAERVGSLFKSR 64

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTGTF RKG+SETK+KVVVGK KVEE  KKTAQK  TI
Sbjct: 65  WALLQQPATRHAVQERLISAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTI 124

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGV IEVTVQRQQSSR+IPHILVRCA+YL  SGLNSPWLFKSDG
Sbjct: 125 LTDIERWQKGVASTDVFGVAIEVTVQRQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDG 184

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+VLQQLVSMYNQD NA +PEGTNPVD+AALAKCYLAS PEPLVT +LYN+IR ARTSI
Sbjct: 185 DKKVLQQLVSMYNQDPNAALPEGTNPVDVAALAKCYLASLPEPLVTFELYNDIRGARTSI 244

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             LRNI KKLPNVNYMTLEF TAL  RISQ ALL KMDARSL+MEMTPIIMWQ DRRPEF
Sbjct: 245 NALRNIFKKLPNVNYMTLEFTTALLQRISQKALLNKMDARSLSMEMTPIIMWQNDRRPEF 304

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YREYWDYHS++SSAKS NNT PTYSAWDMLSEESDDTDASS IPLDD +PVD+SA+EVI 
Sbjct: 305 YREYWDYHSKSSSAKSLNNTPPTYSAWDMLSEESDDTDASSHIPLDDGIPVDFSAVEVIH 364

[Close]

BLAST of CmoCh04G003720 vs. NCBI nr
Match: gi|728834246|gb|KHG13689.1| (hypothetical protein F383_03900 [Gossypium arboreum])

HSP 1 Score: 461.5 bits (1186), Expect = 1.4e-126
Identity = 246/374 (65.78%), Postives = 294/374 (78.61%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVK-- 60
           MPS  + +W+EKA GFFSSSGVKLK+A Q+AGTFVG VAKDAKGN  DV ERVGS+VK  
Sbjct: 1   MPSAVSQQWQEKATGFFSSSGVKLKEASQTAGTFVGEVAKDAKGNVTDVAERVGSMVKNR 60

Query: 61  ------------------SGLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                             S  ATTGTFLRKG++ TK++VVVGK KVEE  KKTAQK  TI
Sbjct: 61  WAFLRQPATRHAVQESLISAAATTGTFLRKGITGTKDRVVVGKTKVEEVAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGVPIEVTVQRQQ+ + IP ILVRCA+YL  SG+NS +LFK++G
Sbjct: 121 LTDIERWQKGVASTDVFGVPIEVTVQRQQAIKPIPLILVRCADYLILSGINSQYLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+V++QLVS YNQD NA +PEG NP+D+AALAK Y+AS PEPL T +LY+EI+SAR+SI
Sbjct: 181 DKKVIEQLVSAYNQDLNASIPEGVNPIDVAALAKYYIASLPEPLTTFELYDEIKSARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             +RN+LK LP+VNYMTLEF+TAL LR+SQ ++L KMDARSLAMEM P+IMWQ DR+PE 
Sbjct: 241 HAMRNVLKMLPSVNYMTLEFITALLLRVSQKSVLNKMDARSLAMEMAPVIMWQKDRKPES 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR+YW  H   S +K S +++PTYSAWDML ++ +D DASS IPLDD +PVD+ AIEVIQ
Sbjct: 301 YRKYWS-HPPKSPSKGSMDSTPTYSAWDMLEDDGEDMDASSHIPLDDGIPVDFGAIEVIQ 360

[Close]

BLAST of CmoCh04G003720 vs. NCBI nr
Match: gi|566168404|ref|XP_006385127.1| (hypothetical protein POPTR_0004s24160g [Populus trichocarpa])

HSP 1 Score: 460.7 bits (1184), Expect = 2.3e-126
Identity = 244/374 (65.24%), Postives = 295/374 (78.88%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS  + +W+EKA GFFS+SGVKLK+AGQSAGTFVG VAKDAKGN ADV E+VGS VK+ 
Sbjct: 1   MPSAVSPQWQEKATGFFSTSGVKLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTG F RKG+SETK+KV VGK KVEE  KKTAQK  TI
Sbjct: 61  WAILREPSTRHAMQERLITAAATTGMFFRKGISETKDKVTVGKTKVEEVAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           LT +ER QK VASTDVFGVPIEVTVQRQ+ S+++PHILV+CA+YL  SGLNS  LFK++G
Sbjct: 121 LTDIERWQKGVASTDVFGVPIEVTVQRQEFSKLVPHILVKCADYLILSGLNSVDLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           DK+V+QQLVS+YNQD+NA +PEG NP+D+A LAKCYLAS PEPL T +LY+EI+ AR+SI
Sbjct: 181 DKKVIQQLVSLYNQDSNASLPEGLNPIDVAFLAKCYLASLPEPLTTFELYDEIKGARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             ++NILKKLP VNYMTLEF+TAL LR+SQ +LL KMDAR++A EM P+IMWQ +R+PE 
Sbjct: 241 HVMKNILKKLPAVNYMTLEFITALLLRVSQKSLLNKMDARAIATEMAPVIMWQKERKPET 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR YW+ +   S +K + + +PTYSAWDMLSEES+D DASS IPLDDA+P D+ AI+++Q
Sbjct: 301 YRSYWN-NLSRSPSKKNMDPAPTYSAWDMLSEESEDMDASSLIPLDDAMPTDFGAIDIVQ 360

[Close]

BLAST of CmoCh04G003720 vs. NCBI nr
Match: gi|802769868|ref|XP_012090477.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Jatropha curcas])

HSP 1 Score: 459.9 bits (1182), Expect = 4.0e-126
Identity = 243/374 (64.97%), Postives = 290/374 (77.54%), Query Frame = 1


Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGNAADVVERVGSVVKS- 60
           MPS  + +W+EKA  FFSSSG KLK+AGQSAGT+VGGVAKDA+GN AD  ER GS VKS 
Sbjct: 1   MPSAGSPQWQEKATVFFSSSGTKLKEAGQSAGTYVGGVAKDARGNVADAAERFGSAVKSR 60

Query: 61  -------------------GLATTGTFLRKGMSETKEKVVVGKDKVEEFVKKTAQKYNTI 120
                                ATTG FLRKG+S+TK+KV VGK KVEE  KKTAQK  TI
Sbjct: 61  WAFLREPSTRHVLQENLITAAATTGMFLRKGLSDTKDKVAVGKTKVEEAAKKTAQKSKTI 120

Query: 121 LT-VERRQKEVASTDVFGVPIEVTVQRQQSSRIIPHILVRCAEYLDSSGLNSPWLFKSDG 180
           +T +ER QK +ASTDVFGVPIEVTVQRQ+SS ++PHILV+CA+YL  SGLNS  LFK++G
Sbjct: 121 ITDIERWQKGIASTDVFGVPIEVTVQRQRSSSLVPHILVKCADYLILSGLNSMDLFKAEG 180

Query: 181 DKRVLQQLVSMYNQDANAPVPEGTNPVDIAALAKCYLASFPEPLVTLKLYNEIRSARTSI 240
           +K+V+Q LVS+YNQD+NA +PEG NP+D+AAL KCYLAS PEPL T +LYNEI+ AR+SI
Sbjct: 181 EKKVIQHLVSVYNQDSNASLPEGVNPLDVAALIKCYLASLPEPLTTFELYNEIKGARSSI 240

Query: 241 TDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKMDARSLAMEMTPIIMWQTDRRPEF 300
             ++NILKKLP VNYMTLE +TAL LR+SQ +LL KMDARSLAME+ P++MWQ +++PEF
Sbjct: 241 YAMKNILKKLPTVNYMTLELITALLLRVSQKSLLNKMDARSLAMEIAPVVMWQKEQKPEF 300

Query: 301 YREYWDYHSENSSAKSSNNTSPTYSAWDMLSEESDDTDASSDIPLDDALPVDYSAIEVIQ 354
           YR+YW   S N   K S + +P YSAWDMLS+E +D DASS IPLDD  PVD+SAIEVIQ
Sbjct: 301 YRQYWSQASRN-PPKRSRDPAPNYSAWDMLSDEGEDLDASSPIPLDDGTPVDFSAIEVIQ 360

The following BLAST results are available for this feature:

BLAST of CmoCh04G003720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RGAPX_ARATH	1.6e-114	61.39	Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana ...	[more]
GACJJ_DICDI	2.5e-11	26.88	Rho GTPase-activating protein gacJJ OS=Dictyostelium discoideum GN=gacJJ PE=3 SV...	[more]
RHG24_RAT	2.7e-10	25.30	Rho GTPase-activating protein 24 OS=Rattus norvegicus GN=Arhgap24 PE=1 SV=2	[more]
RHG24_MOUSE	2.7e-10	25.30	Rho GTPase-activating protein 24 OS=Mus musculus GN=Arhgap24 PE=1 SV=2	[more]
RG68F_DROME	3.6e-10	26.14	Rho GTPase-activating protein 68F OS=Drosophila melanogaster GN=RhoGAP68F PE=1 S...	[more]

BLAST of CmoCh04G003720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXL2_CUCSA	2.0e-153	77.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022930 PE=4 SV=1	[more]
A0A0B0NPG4_GOSAR	9.5e-127	65.78	Uncharacterized protein OS=Gossypium arboreum GN=F383_03900 PE=4 SV=1	[more]
U5GL40_POPTR	1.6e-126	65.24	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s24160g PE=4 SV=1	[more]
A0A067JSD0_JATCU	2.8e-126	64.97	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26285 PE=4 SV=1	[more]
A0A0D2TA56_GOSRA	1.0e-125	65.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G215000 PE=4 SV=1	[more]

BLAST of CmoCh04G003720 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61530.1	8.8e-116	61.39	small G protein family protein / RhoGAP family protein	[more]

BLAST of CmoCh04G003720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458339\|ref\|XP_004146905.1\|	2.9e-153	77.54	PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis sati...	[more]
gi\|659107846\|ref\|XP_008453890.1\|	1.4e-150	77.01	PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis melo...	[more]
gi\|728834246\|gb\|KHG13689.1\|	1.4e-126	65.78	hypothetical protein F383_03900 [Gossypium arboreum]	[more]
gi\|566168404\|ref\|XP_006385127.1\|	2.3e-126	65.24	hypothetical protein POPTR_0004s24160g [Populus trichocarpa]	[more]
gi\|802769868\|ref\|XP_012090477.1\|	4.0e-126	64.97	PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Jatropha cur...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000198	RhoGAP_dom
IPR008936	Rho_GTPase_activation_prot

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
biological_process	GO:1902582	single-organism intracellular transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006810	transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003720.1	CmoCh04G003720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000198	Rho GTPase-activating protein domain	GENE3D	G3DSA:1.10.555.10		coord: 334..352 score: 2.6E-40coord: 128..285 score: 2.6
IPR000198	Rho GTPase-activating protein domain	PFAM	PF00620	RhoGAP	coord: 134..274 score: 1.9
IPR000198	Rho GTPase-activating protein domain	SMART	SM00324	RhoGAP_3	coord: 131..346 score: 4.1
IPR000198	Rho GTPase-activating protein domain	PROFILE	PS50238	RHOGAP	coord: 118..349 score: 27
IPR008936	Rho GTPase activation protein	unknown	SSF48350	GTPase activation domain, GAP	coord: 113..271 score: 2.75E-34coord: 322..349 score: 2.75
None	No IPR available	PANTHER	PTHR23176	RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN	coord: 35..273 score: 4.5E-164coord: 310..353 score: 4.5E
None	No IPR available	PANTHER	PTHR23176:SF32	SUBFAMILY NOT NAMED	coord: 35..273 score: 4.5E-164coord: 310..353 score: 4.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003720	CmaCh16G002090	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G003720	CmaCh04G003530	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G003720	Cla010723	Watermelon (97103) v1	cmowmB687
CmoCh04G003720	Csa4G022930	Cucumber (Chinese Long) v2	cmocuB700
CmoCh04G003720	MELO3C017654	Melon (DHL92) v3.5.1	cmomeB694
CmoCh04G003720	ClCG07G016890	Watermelon (Charleston Gray)	cmowcgB671
CmoCh04G003720	CSPI04G04060	Wild cucumber (PI 183967)	cmocpiB708
CmoCh04G003720	Lsi07G001080	Bottle gourd (USVL1VR-Ls)	cmolsiB690
CmoCh04G003720	Cp4.1LG01g03620	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G003720	Cp4.1LG14g05380	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G003720	MELO3C017654.2	Melon (DHL92) v3.6.1	cmomedB788
CmoCh04G003720	CsaV3_4G004120	Cucumber (Chinese Long) v3	cmocucB0828
CmoCh04G003720	Cla97C07G143910	Watermelon (97103) v2	cmowmbB749
CmoCh04G003720	Bhi01G002034	Wax gourd	cmowgoB0845
CmoCh04G003720	Carg08027	Silver-seed gourd	carcmoB0514
CmoCh04G003720	Carg16752	Silver-seed gourd	carcmoB1177

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G003720	CmoCh16G002270	Cucurbita moschata (Rifu)	cmocmoB286

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G003720	Cucumber (Gy14) v1	cgycmoB0197
CmoCh04G003720	Cucumber (Gy14) v2	cgybcmoB516