CmaCh04G003530 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G003530
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRho gtpase-activating protein
LocationCma_Chr04 : 1737570 .. 1740515 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCAGCTTCTGCAAGCTGAGCGCGGTTTTTTGGCTTTTCGGAATCGTGGGTACTTAAGTACAATTTTCTTCTTCGGTTTTCTCGGCAAAGTTCTTGTGCGATTCTAGGGATTTTCCTGCTTTGTTGGTACTCGATTACGACTGCGAGGTAGAATTCTTTACTGGTAGAAATTTCTTTATGTTTGATCAATGTAAACAGTTGTGATTGATTATCGTTAGTTTTCTTTTCTCGAGCTCGTGGATTTTTTTTAATGTTATTTCTCTTTATTCTGCCACTCTCTGATTTTTTTTTTTCTTAATTTAAAATTCTGTTGTCGGGAAATTTAGCAGAGAATTCGACTTTGAAATAATTTTGTGATGTTATTTGGACGATCTTGTGCGGTAGTCAATTTTTATGTTTATGGTTGAGTTGTGTTTCACTGACAGTGGATGGTTCCTTGATTTTTTCATCGGATATGACTAGCTTGTTTGTTTTATCAATTTTACTGGGATGAGCAAAGAAGTGAAATGTTTAAAGAGTTCTAGCGGATGACTTTATTAGTTTTTTCACTAATTTTTACTAGGAAAGGATAGAAAATGAAATATAATTGAGAGTATTGAGACAGTTGATGATAGTGTTTAGCTGAGAATGAACTGAATTATAGTAATTAAGTTTTTAGTCATGGATGTCAGATTCCTTATCATTCGGGGTTTCTTTTGAACTGAATTTAATAGTGTAAGGGAAAGTATGAATCGGTGCATCATTTGATGAGGTGCTATTATTTTGAACTTCGATGTATTGTTCTGCAACAGGCATAATCAATACACAAATTTAAACTGACGCTGGTTTCAAAGTTGGTTCAATGCCTTCTGTTAATACTTCAGAGTGGAAGGAGAAGGCTGGTGGTTTCTTTTCTTCATCAGGTACTGTTTTCAGTACTTAAATGAATATGATTTTGTTGTTTACTCTCCTGCATTTCTAATTCTCATGTTTTCTATCCTATAATGATATATTGCAGGAGTAAAGCTGAAACAAGCTGGACAATCAGCTGGAACTTTCGTCGGGGGAGTTGCAAAGGATGCAAAAGGATATGCTGCTGATGCGGCTGAACGAATTGGTTCTTTGGTACATGCGATTCCAGAAAGTCTAAAATCTGCTGCTGATACTACTGGCACATTCTTGAAAAAAGGCGTGTCAGAGACAAAGGAGAAAGTTGTTAAAGTTGTAGAGGTAATTTCGGTGGAACTTTTCTTTTCTATTTTTATGTTACATAAAATGATATTTCCTTTCATATTGGACTTGTTTATATTTCGAGTAATTAACACGTTTGAGCTCTCTGCAAACTTTTCTTGCATGGGTCTGTATTAATTTTTTATTTTGATATGAATCTCTAGTATTTGGAGTTCTAATTGAGGTAACCGTACAAAGACAACAGTCAAGCAGGGTCATTCCACACATTTTGGTCAGATGTGCTGAATATCTCAACTCGTCAGGTACTGGATTTCAAAATTACTTCCATACATGAACGCATTTATACATGTTTTTTTTTGCATGTGACGAAAATTCCATCGAACATTTGCCTTTGCTTATCCTTTATTTTTTTTTTAGGGCTAAACTCACCATGGCTATTTAAGTCTGACGGAGATAAAAGGGTTCTTCAGCAGTTGGTGTCAATGTATAATCAAGGTAAAGGAAGTAGTTTATGCGGTTAAGTTTTGTCTTTTGTGATCTACTTTCAATAATTTCACAATGTGTGTCGGTTGCATACATTTTTCAGATGCCCCAGTACCTGAAGGTACAAATCCAGTTGACATAGCAGCTCTAGCTAAATGTTACCTGGCCAGTTTTCCTGAGCCACTAGTCACATTTAGGCTTTACAATGAGATCAGGGGTGCACGTACAAGCATTACTGACCTGCGAAACATTTTAAAGAAACTTCCCAATGTGAACTACATGACCTTAGAGTTTATGACTGCACTATTTCTCCGCATTAGCCAAACAGCACTGCTTTATAAGGCAGGGTCTCTATCTCTCTCTCTGTGCATGCATACATGTTCGTTCATTTCTGTTGCATTCTTGTTTATATAGGACTGTTTATGAATTTGAGCTGGCATGTAAGAATATGTTATGTTTACTGGTCCTCAACAAGGCTGGTGCTCTCTCTTGTGTGCACGCTTACACATATATCTTTTTTTTTTTGTTTATTTAGGTCCATTTATGAGTTTAAGTTGGCTTGTAAGAACACATTTATGCAGTTTTTGAACTAACTTGATGTGATGACCTCTGCTTTATTACAAACTTCAAACCTTGAAAAAGTCACTTGGTATGCATTTATCAGAGGTTGTCTTGAATTAACCATCGTCATAAAGGATTATTTTATATGCTACTTGATATCGAAGCACTACATACATTTTAGATAGAGAAGCTTGCGTGCAAGGCTGCAAATTTTTACATGTTCGCAAATAACTTATTAGTGCAACATCATGACCCATATATTTATGTGTTCAAATATTTCAGAACCTATATCTCATAATCTTTCTCGTGATCAACATGATATACTGTCATGCGTAGCCAGTGATGTATGCCTTTGATGGTTTGGGTATTTTGGCTATTATTTTGCCTGAGACGATTTATGGATGTCTCTTCAGGGTTCTATGCACAAATTTCTAAAGCAAAGCACGTGCTGTCCAGGACACTCTAATTATAGCTGATACGATTTTTTTTTTTTTTTTTTTTGATATTGCTAAATCTTTTCTGATGTGTAATTGCTAATTTTCTGCATTGAAAATTTGACCTTTCTTGCCTAACTTTTGGAGTCATCAATCTTCTCATATACTCAAACGTAAATAGTCCATTCATGTTCTTTGTTGTGTTGCTAATGTCTGTATTCCTTCAATAGATGGATGCTCGTAGCTCGCTATGGAGATGACTCCTATAATAATGTGGCAAATGGACAGGCGGCCTGA

mRNA sequence

CTTCAGCTTCTGCAAGCTGAGCGCGGTTTTTTGGCTTTTCGGAATCGTGGGTACTTAAGTACAATTTTCTTCTTCGGTTTTCTCGGCAAAGTTCTTGTGCGATTCTAGGGATTTTCCTGCTTTGTTGGTACTCGATTACGACTGCGAGGCATAATCAATACACAAATTTAAACTGACGCTGGTTTCAAAGTTGGTTCAATGCCTTCTGTTAATACTTCAGAGTGGAAGGAGAAGGCTGGTGGTTTCTTTTCTTCATCAGGAGTAAAGCTGAAACAAGCTGGACAATCAGCTGGAACTTTCGTCGGGGGAGTTGCAAAGGATGCAAAAGGATATGCTGCTGATGCGGCTGAACGAATTGGTTCTTTGGTACATGCGATTCCAGAAAGTCTAAAATCTGCTGCTGATACTACTGGCACATTCTTGAAAAAAGGCGTGTCAGAGACAAAGGAGAAAGTTGTTAAAGTTGTAGAGGTAACCGTACAAAGACAACAGTCAAGCAGGGTCATTCCACACATTTTGGTCAGATGTGCTGAATATCTCAACTCGTCAGGGCTAAACTCACCATGGCTATTTAAGTCTGACGGAGATAAAAGGGTTCTTCAGCAGTTGGTGTCAATGTATAATCAAGATGCCCCAGTACCTGAAGGTACAAATCCAGTTGACATAGCAGCTCTAGCTAAATGTTACCTGGCCAGTTTTCCTGAGCCACTAGTCACATTTAGGCTTTACAATGAGATCAGGGGTGCACGTACAAGCATTACTGACCTGCGAAACATTTTAAAGAAACTTCCCAATGTGAACTACATGACCTTAGAGTTTATGACTGCACTATTTCTCCGCATTAGCCAAACAGCACTGCTTTATAAGGCAGGATGGATGCTCGTAGCTCGCTATGGAGATGACTCCTATAATAATGTGGCAAATGGACAGGCGGCCTGA

Coding sequence (CDS)

ATGCCTTCTGTTAATACTTCAGAGTGGAAGGAGAAGGCTGGTGGTTTCTTTTCTTCATCAGGAGTAAAGCTGAAACAAGCTGGACAATCAGCTGGAACTTTCGTCGGGGGAGTTGCAAAGGATGCAAAAGGATATGCTGCTGATGCGGCTGAACGAATTGGTTCTTTGGTACATGCGATTCCAGAAAGTCTAAAATCTGCTGCTGATACTACTGGCACATTCTTGAAAAAAGGCGTGTCAGAGACAAAGGAGAAAGTTGTTAAAGTTGTAGAGGTAACCGTACAAAGACAACAGTCAAGCAGGGTCATTCCACACATTTTGGTCAGATGTGCTGAATATCTCAACTCGTCAGGGCTAAACTCACCATGGCTATTTAAGTCTGACGGAGATAAAAGGGTTCTTCAGCAGTTGGTGTCAATGTATAATCAAGATGCCCCAGTACCTGAAGGTACAAATCCAGTTGACATAGCAGCTCTAGCTAAATGTTACCTGGCCAGTTTTCCTGAGCCACTAGTCACATTTAGGCTTTACAATGAGATCAGGGGTGCACGTACAAGCATTACTGACCTGCGAAACATTTTAAAGAAACTTCCCAATGTGAACTACATGACCTTAGAGTTTATGACTGCACTATTTCTCCGCATTAGCCAAACAGCACTGCTTTATAAGGCAGGATGGATGCTCGTAGCTCGCTATGGAGATGACTCCTATAATAATGTGGCAAATGGACAGGCGGCCTGA

Protein sequence

MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLVHAIPESLKSAADTTGTFLKKGVSETKEKVVKVVEVTVQRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVSMYNQDAPVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSITDLRNILKKLPNVNYMTLEFMTALFLRISQTALLYKAGWMLVARYGDDSYNNVANGQAA
Homology
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BLAST of CmaCh04G003530 vs. Swiss-Prot
Match: RGAPX_ARATH (Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana GN=At5g61530 PE=1 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.8e-46
Identity = 122/277 (44.04%), Postives = 160/277 (57.76%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSA------------------GTFVG------ 60
           MPS+ + +W+E+  GFFSSSG KL++AGQ+A                     VG      
Sbjct: 1   MPSLISQQWQERTSGFFSSSGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSR 60

Query: 61  -------GVAKDAKGYAADAAERIGSLVHA---------------IPESLKSAADTTGTF 120
                        + +   AA   G+ V                 + E+ K  A  + T 
Sbjct: 61  WAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTI 120

Query: 121 L------KKGVSETKEKVVKVVEVTVQRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSD 180
           L      +KGV+ +    V  +E+TVQRQ+SSR IP ILV+CA+YL  +GLNSP LFK++
Sbjct: 121 LTDIERWQKGVASSDVFGV-AIEITVQRQESSRPIPLILVKCADYLILTGLNSPNLFKAE 180

Query: 181 GDKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTS 224
           GD++++QQLVS YNQD  A +PEG NPVD+AAL K YLAS P PL TF LYNEI+ AR+S
Sbjct: 181 GDRKLIQQLVSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSS 240

[Close]
BLAST of CmaCh04G003530 vs. Swiss-Prot
Match: RHG08_HUMAN (Rho GTPase-activating protein 8 OS=Homo sapiens GN=ARHGAP8 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 37/134 (27.61%), Postives = 66/134 (49.25%), Query Frame = 1 

Query: 97  QQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVSMYNQDAPVP-EGTNPVD 156
           +    +IP +L     YL   GL +  LF+     + ++++  +YNQ  PV  +    + 
Sbjct: 234 KNQGELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTVREIQRLYNQGKPVNFDDYGDIH 293

Query: 157 I-AALAKCYLASFPEPLVTFRLYNEIRG-----ARTSITDLRNILKKLPNVNYMTLEFMT 216
           I A + K +L   P+PL+TF+ Y +I G     +   +T  R IL+ LP  NY+ L ++ 
Sbjct: 294 IPAVILKTFLRELPQPLLTFQAYEQILGITCVESSLRVTGCRQILRSLPEHNYVVLRYLM 353

Query: 217 ALFLRISQTALLYK 224
                +S+ ++  K
Sbjct: 354 GFLHAVSRESIFNK 367

[Close]
BLAST of CmaCh04G003530 vs. Swiss-Prot
Match: RHG01_MOUSE (Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 38/123 (30.89%), Postives = 63/123 (51.22%), Query Frame = 1 

Query: 103 IPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVSMYNQDAPVP-EGTNPVDI-AALA 162
           IP +L     YL +  L +  +F+   + +V++++   YN   PV  +  N + + A + 
Sbjct: 259 IPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVIL 318

Query: 163 KCYLASFPEPLVTFRLYNEIRG-------ARTSITDLRNILKKLPNVNYMTLEFMTALFL 217
           K +L   PEPL+TF LY  + G        R  +T  + +L+ LP  NY  L F+TA  +
Sbjct: 319 KTFLRELPEPLLTFDLYPHVVGFLNIDESQRVEVT--QQVLQTLPEENYQVLHFLTAFLV 378

[Close]
BLAST of CmaCh04G003530 vs. Swiss-Prot
Match: RHG01_HUMAN (Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-08
Identity = 36/129 (27.91%), Postives = 62/129 (48.06%), Query Frame = 1 

Query: 95  QRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVSMYNQDAPVP-EGTNP 154
           ++      IP +L     YL +  L +  +F+   + +V++++   YN   PV  +  N 
Sbjct: 251 EKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNE 310

Query: 155 VDI-AALAKCYLASFPEPLVTFRLYNEIRG-----ARTSITDLRNILKKLPNVNYMTLEF 214
           + + A + K +L   PEPL+TF LY  + G         +     +L+ LP  NY  L F
Sbjct: 311 LHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRF 370

Query: 215 MTALFLRIS 217
           +TA  ++IS
Sbjct: 371 LTAFLVQIS 379

[Close]
BLAST of CmaCh04G003530 vs. Swiss-Prot
Match: RHG08_MOUSE (Rho GTPase-activating protein 8 OS=Mus musculus GN=Arhgap8 PE=2 SV=3)

HSP 1 Score: 59.3 bits (142), Expect = 6.8e-08
Identity = 36/134 (26.87%), Postives = 64/134 (47.76%), Query Frame = 1 

Query: 97  QQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVSMYNQDAPVP-EGTNPVD 156
           +    +IP +L     YL   GL +  LF+     + ++Q+  +Y+Q  PV  +    + 
Sbjct: 203 KNQGELIPPVLRWTVTYLREKGLRTEGLFRRSASAQTVRQVQRLYDQGKPVNFDDYGDMH 262

Query: 157 I-AALAKCYLASFPEPLVTFRLYNEIRG-----ARTSITDLRNILKKLPNVNYMTLEFMT 216
           + A + K +L   P+PL+TF+ Y +I G     +   +T  R IL+ LP  NY  L ++ 
Sbjct: 263 LPAVILKTFLRELPQPLLTFQAYEQILGITSVESSLRVTHCRLILRSLPEHNYAVLRYLM 322

Query: 217 ALFLRISQTALLYK 224
                +S  ++  K
Sbjct: 323 GFLHEVSLESISNK 336

[Close]
BLAST of CmaCh04G003530 vs. TrEMBL
Match: A0A0A0KXL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022930 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.9e-75
Identity = 170/276 (61.59%), Postives = 188/276 (68.12%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MP+VN+S+W+EKA GFFSSSGVKLK+AG SAG FV  VAKDAKG AAD AER+G+L    
Sbjct: 5   MPTVNSSQWQEKASGFFSSSGVKLKEAGHSAGNFVEEVAKDAKGNAADVAERVGTLFKSR 64

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKV----VKVVEVTVQRQQSSRVI 120
                     HA+ E L SAA TTGTF +KGVSETK+KV    VKV EV  +  Q S+ I
Sbjct: 65  WALLQQPATRHAVQERLISAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTI 124

Query: 121 PHILVR----------------------------------CAEYLNSSGLNSPWLFKSDG 180
              + R                                  CA+YL  SGLNSPWLFKSDG
Sbjct: 125 LTDIERWQKGVASTDVFGVSIEVTVQKQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDG 184

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+VLQQLVSMYNQD  AP+PEGTNPVD+AALAKCYLAS PEPLVTF LYNEIRGARTSI
Sbjct: 185 DKKVLQQLVSMYNQDPNAPLPEGTNPVDVAALAKCYLASLPEPLVTFELYNEIRGARTSI 244

[Close]
BLAST of CmaCh04G003530 vs. TrEMBL
Match: W9RAR1_9ROSA (Putative Rho GTPase-activating protein OS=Morus notabilis GN=L484_001337 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.8e-66
Identity = 146/266 (54.89%), Postives = 182/266 (68.42%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS    +W +KA GFFSSSGVK+K+AGQSAGTFVG VAKDA+G  AD A R GSLV   
Sbjct: 1   MPSPILPQWHDKASGFFSSSGVKIKEAGQSAGTFVGEVAKDARGNVADVAGRFGSLVKSR 60

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKVVKV------------------ 120
                     HA+ E L +AA TTGT  ++ +SETK+KV K                   
Sbjct: 61  WALLQQPSTKHAVQERLITAAATTGTLFRRSLSETKDKVAKKTAQRSKTILTDIERWQKG 120

Query: 121 ----------VEVTVQRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVS 180
                     +EVTVQR+QS R IP++LV+CA+YL  SGLN+P+LFK++ DK+V+QQLVS
Sbjct: 121 VASTDVFGVPIEVTVQREQSMRPIPNMLVKCADYLVLSGLNTPFLFKTEADKKVIQQLVS 180

Query: 181 MYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSITDLRNILKKL 224
           ++NQD  A +PE  N +++AAL K YLAS PEPL TF LYNEI+GAR+SI  +RNILK+L
Sbjct: 181 LFNQDSNASLPESANSIEVAALVKYYLASLPEPLTTFELYNEIKGARSSINAMRNILKRL 240

[Close]
BLAST of CmaCh04G003530 vs. TrEMBL
Match: C6T8Q7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.8e-55
Identity = 138/276 (50.00%), Postives = 170/276 (61.59%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS+ + +W++KA GFFSSSGVKLK+A +SAGTFVG V KD K   A+ A R+GS+V   
Sbjct: 1   MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSR 60

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKVV----KVVEVTVQRQQSSRVI 120
                     HA+ +   SAA TTGT L++G S TK+KVV    KV EV     Q S+ I
Sbjct: 61  WALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTI 120

Query: 121 PHILVRCAEYLNSSGL----------------------------------NSPWLFKSDG 180
              + R  + + S+ L                                  NSP LFKS+G
Sbjct: 121 LTDIERWQKGIASTDLFGVPIEVTAQRQDCSKPIPQILVKCGDYLIVSGLNSPNLFKSEG 180

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+V+ QLVS+YNQD  A VPEGTNPVD+AAL K YLAS PEPL T  LYNEIR AR+SI
Sbjct: 181 DKKVIHQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRSARSSI 240

[Close]
BLAST of CmaCh04G003530 vs. TrEMBL
Match: A0A0B2S2F6_GLYSO (Putative Rho GTPase-activating protein OS=Glycine soja GN=glysoja_015278 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-54
Identity = 138/276 (50.00%), Postives = 170/276 (61.59%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS+ + +W++KA GFFSSSGVKLK+A +SAGTFVG V KD K   A+ A R+GS+V   
Sbjct: 1   MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSR 60

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKVV----KVVEVTVQRQQSSRVI 120
                     HA+ +   SAA TTGT L++G S TK+KVV    KV EV     Q S+ I
Sbjct: 61  WALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTI 120

Query: 121 PHILVRCAEYLNSSGL----------------------------------NSPWLFKSDG 180
              + R  + + S+ L                                  NSP LFKS+G
Sbjct: 121 LTDIERWQKGVASTDLFGVPIEVTAQRQDCSKPIPQILVKCGDYLIVSGLNSPNLFKSEG 180

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+V+ QLVS+YNQD  A VPEGTNPVD+AAL K YLAS PEPL T  LYNEIR AR+SI
Sbjct: 181 DKKVIHQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRSARSSI 240

[Close]
BLAST of CmaCh04G003530 vs. TrEMBL
Match: I1KZQ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G001400 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-54
Identity = 138/276 (50.00%), Postives = 170/276 (61.59%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS+ + +W++KA GFFSSSGVKLK+A +SAGTFVG V KD K   A+ A R+GS+V   
Sbjct: 1   MPSIMSPQWQDKAAGFFSSSGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSR 60

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKVV----KVVEVTVQRQQSSRVI 120
                     HA+ +   SAA TTGT L++G S TK+KVV    KV EV     Q S+ I
Sbjct: 61  WALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTI 120

Query: 121 PHILVRCAEYLNSSGL----------------------------------NSPWLFKSDG 180
              + R  + + S+ L                                  NSP LFKS+G
Sbjct: 121 LTDIERWQKGVASTDLFGVPIEVTAQRQDCSKPIPQILVKCGDYLIVSGLNSPNLFKSEG 180

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+V+ QLVS+YNQD  A VPEGTNPVD+AAL K YLAS PEPL T  LYNEIR AR+SI
Sbjct: 181 DKKVIHQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRSARSSI 240

[Close]
BLAST of CmaCh04G003530 vs. TAIR10
Match: AT5G61530.1 (AT5G61530.1 small G protein family protein / RhoGAP family protein)

HSP 1 Score: 186.0 bits (471), Expect = 2.7e-47
Identity = 122/277 (44.04%), Postives = 160/277 (57.76%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSA------------------GTFVG------ 60
           MPS+ + +W+E+  GFFSSSG KL++AGQ+A                     VG      
Sbjct: 1   MPSLISQQWQERTSGFFSSSGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSR 60

Query: 61  -------GVAKDAKGYAADAAERIGSLVHA---------------IPESLKSAADTTGTF 120
                        + +   AA   G+ V                 + E+ K  A  + T 
Sbjct: 61  WAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTI 120

Query: 121 L------KKGVSETKEKVVKVVEVTVQRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSD 180
           L      +KGV+ +    V  +E+TVQRQ+SSR IP ILV+CA+YL  +GLNSP LFK++
Sbjct: 121 LTDIERWQKGVASSDVFGV-AIEITVQRQESSRPIPLILVKCADYLILTGLNSPNLFKAE 180

Query: 181 GDKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTS 224
           GD++++QQLVS YNQD  A +PEG NPVD+AAL K YLAS P PL TF LYNEI+ AR+S
Sbjct: 181 GDRKLIQQLVSAYNQDPRASIPEGVNPVDVAALLKYYLASLPTPLTTFELYNEIKDARSS 240

[Close]
BLAST of CmaCh04G003530 vs. NCBI nr
Match: gi|449458339|ref|XP_004146905.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 8.4e-75
Identity = 170/276 (61.59%), Postives = 188/276 (68.12%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MP+VN+S+W+EKA GFFSSSGVKLK+AG SAG FV  VAKDAKG AAD AER+G+L    
Sbjct: 5   MPTVNSSQWQEKASGFFSSSGVKLKEAGHSAGNFVEEVAKDAKGNAADVAERVGTLFKSR 64

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKV----VKVVEVTVQRQQSSRVI 120
                     HA+ E L SAA TTGTF +KGVSETK+KV    VKV EV  +  Q S+ I
Sbjct: 65  WALLQQPATRHAVQERLISAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTI 124

Query: 121 PHILVR----------------------------------CAEYLNSSGLNSPWLFKSDG 180
              + R                                  CA+YL  SGLNSPWLFKSDG
Sbjct: 125 LTDIERWQKGVASTDVFGVSIEVTVQKQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDG 184

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+VLQQLVSMYNQD  AP+PEGTNPVD+AALAKCYLAS PEPLVTF LYNEIRGARTSI
Sbjct: 185 DKKVLQQLVSMYNQDPNAPLPEGTNPVDVAALAKCYLASLPEPLVTFELYNEIRGARTSI 244

[Close]
BLAST of CmaCh04G003530 vs. NCBI nr
Match: gi|659107846|ref|XP_008453890.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 8.7e-72
Identity = 166/276 (60.14%), Postives = 184/276 (66.67%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MP+VN+S+W+EKA GFF  +GVKLK+AG SAG FV  VAKDAKG AAD AER+GSL    
Sbjct: 5   MPTVNSSQWQEKASGFFQIAGVKLKEAGHSAGNFVEEVAKDAKGNAADVAERVGSLFKSR 64

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKV----VKVVEVTVQRQQSSRVI 120
                     HA+ E L SAA TTGTF +KGVSETK+KV    VKV EV  +  Q S+ I
Sbjct: 65  WALLQQPATRHAVQERLISAAATTGTFFRKGVSETKDKVVVGKVKVEEVAKKTAQKSKTI 124

Query: 121 PHILVR----------------------------------CAEYLNSSGLNSPWLFKSDG 180
              + R                                  CA+YL  SGLNSPWLFKSDG
Sbjct: 125 LTDIERWQKGVASTDVFGVAIEVTVQRQQSSRVIPHILVRCADYLVLSGLNSPWLFKSDG 184

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+VLQQLVSMYNQD  A +PEGTNPVD+AALAKCYLAS PEPLVTF LYN+IRGARTSI
Sbjct: 185 DKKVLQQLVSMYNQDPNAALPEGTNPVDVAALAKCYLASLPEPLVTFELYNDIRGARTSI 244

[Close]
BLAST of CmaCh04G003530 vs. NCBI nr
Match: gi|703096540|ref|XP_010095872.1| (putative Rho GTPase-activating protein [Morus notabilis])

HSP 1 Score: 259.6 bits (662), Expect = 5.5e-66
Identity = 146/266 (54.89%), Postives = 182/266 (68.42%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS    +W +KA GFFSSSGVK+K+AGQSAGTFVG VAKDA+G  AD A R GSLV   
Sbjct: 1   MPSPILPQWHDKASGFFSSSGVKIKEAGQSAGTFVGEVAKDARGNVADVAGRFGSLVKSR 60

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKVVKV------------------ 120
                     HA+ E L +AA TTGT  ++ +SETK+KV K                   
Sbjct: 61  WALLQQPSTKHAVQERLITAAATTGTLFRRSLSETKDKVAKKTAQRSKTILTDIERWQKG 120

Query: 121 ----------VEVTVQRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKRVLQQLVS 180
                     +EVTVQR+QS R IP++LV+CA+YL  SGLN+P+LFK++ DK+V+QQLVS
Sbjct: 121 VASTDVFGVPIEVTVQREQSMRPIPNMLVKCADYLVLSGLNTPFLFKTEADKKVIQQLVS 180

Query: 181 MYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSITDLRNILKKL 224
           ++NQD  A +PE  N +++AAL K YLAS PEPL TF LYNEI+GAR+SI  +RNILK+L
Sbjct: 181 LFNQDSNASLPESANSIEVAALVKYYLASLPEPLTTFELYNEIKGARSSINAMRNILKRL 240

[Close]
BLAST of CmaCh04G003530 vs. NCBI nr
Match: gi|743849452|ref|XP_011028470.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Populus euphratica])

HSP 1 Score: 226.5 bits (576), Expect = 5.1e-56
Identity = 140/276 (50.72%), Postives = 175/276 (63.41%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS  + +W+EKA GFFS+SGVKLK+AGQSAGTFVG VAKDAKG  AD AE++GS V   
Sbjct: 1   MPSAVSPQWQEKATGFFSTSGVKLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTR 60

Query: 61  ----------HAIPESLKSAADTTGTFLKKGVSETKEKV----VKVVEVTVQRQQSSRVI 120
                     HA+ E L +AA TTG F +KG+SETK+KV     KV EV  +  Q S+ +
Sbjct: 61  WAILREPSTRHAMQERLITAAATTGMFFRKGISETKDKVTVGKTKVEEVAKKTAQKSKTL 120

Query: 121 PHILVRCAEYLNSSGLNS----------------PW------------------LFKSDG 180
              + R  + + S+ +                  P                   LFK++G
Sbjct: 121 LTDIERWQKGVASTDVFGVPIEVTVQRQEFSKLVPHILVKCADNLILSGLNSVDLFKAEG 180

Query: 181 DKRVLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSI 224
           DK+V+QQLVS+YNQD  A +PEG NP D+A LAKCYLAS PEPL TF LY+EI+GAR+SI
Sbjct: 181 DKKVIQQLVSLYNQDSNASLPEGLNPTDVAFLAKCYLASLPEPLTTFELYDEIKGARSSI 240

[Close]
BLAST of CmaCh04G003530 vs. NCBI nr
Match: gi|727625963|ref|XP_010483825.1| (PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530-like [Camelina sativa])

HSP 1 Score: 222.2 bits (565), Expect = 9.7e-55
Identity = 132/273 (48.35%), Postives = 170/273 (62.27%), Query Frame = 1 

Query: 1   MPSVNTSEWKEKAGGFFSSSGVKLKQAGQSAGTFVGGVAKDAKGYAADAAERIGSLV--- 60
           MPS+ + +W+EK  GFFSSSG KL++A QSAG+FVG VAKDAK    D AER+G++    
Sbjct: 1   MPSLISQQWQEKTSGFFSSSGTKLREARQSAGSFVGEVAKDAKVNVTDVAERVGTMFKSR 60

Query: 61  ----------HAIPESLKSAADTTGTFL-------------------KKGVSETKEKVVK 120
                     HA+ E L +AA TTGT +                   KK   ++K  +  
Sbjct: 61  WAILQQPATRHAVQEHLITAAATTGTLVXLLCKRKLDTRGTYNTFAAKKTAQKSKTILTD 120

Query: 121 V----------------VEVTVQRQQSSRVIPHILVRCAEYLNSSGLNSPWLFKSDGDKR 180
           +                +E TVQRQ+SSR IP IL +CA+YL  +GLNSP LFK++GDK+
Sbjct: 121 IERWKKGVASSDVFGVAIENTVQRQESSRPIPFILTKCADYLILTGLNSPSLFKAEGDKK 180

Query: 181 VLQQLVSMYNQD--APVPEGTNPVDIAALAKCYLASFPEPLVTFRLYNEIRGARTSITDL 224
           ++ QLVS YNQD  A +PEG NPVD+AAL K YLAS P PL TF LYNEI+ AR+S+  +
Sbjct: 181 LIHQLVSTYNQDPRASIPEGVNPVDVAALMKYYLASLPTPLTTFELYNEIKDARSSVHRM 240

The following BLAST results are available for this feature:
BLAST of CmaCh04G003530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RGAPX_ARATH4.8e-4644.04Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana ... [more]
RHG08_HUMAN1.2e-0927.61Rho GTPase-activating protein 8 OS=Homo sapiens GN=ARHGAP8 PE=1 SV=1[more]
RHG01_MOUSE1.0e-0830.89Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1 SV=1[more]
RHG01_HUMAN4.0e-0827.91Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1[more]
RHG08_MOUSE6.8e-0826.87Rho GTPase-activating protein 8 OS=Mus musculus GN=Arhgap8 PE=2 SV=3[more]
BLAST of CmaCh04G003530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXL2_CUCSA5.9e-7561.59Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022930 PE=4 SV=1[more]
W9RAR1_9ROSA3.8e-6654.89Putative Rho GTPase-activating protein OS=Morus notabilis GN=L484_001337 PE=4 SV... [more]
C6T8Q7_SOYBN8.8e-5550.00Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A0B2S2F6_GLYSO1.2e-5450.00Putative Rho GTPase-activating protein OS=Glycine soja GN=glysoja_015278 PE=4 SV... [more]
I1KZQ6_SOYBN1.2e-5450.00Uncharacterized protein OS=Glycine max GN=GLYMA_09G001400 PE=4 SV=1[more]
BLAST of CmaCh04G003530 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G61530.12.7e-4744.04 small G protein family protein / RhoGAP family protein[more]
BLAST of CmaCh04G003530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458339|ref|XP_004146905.1|8.4e-7561.59PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis sati... [more]
gi|659107846|ref|XP_008453890.1|8.7e-7260.14PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Cucumis melo... [more]
gi|703096540|ref|XP_010095872.1|5.5e-6654.89putative Rho GTPase-activating protein [Morus notabilis][more]
gi|743849452|ref|XP_011028470.1|5.1e-5650.72PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Populus euph... [more]
gi|727625963|ref|XP_010483825.1|9.7e-5548.35PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530-like [Camelin... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
biological_process GO:0006810 transport
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006623 protein targeting to vacuole
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G003530.1CmaCh04G003530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainGENE3DG3DSA:1.10.555.10coord: 98..218
score: 1.1
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 104..218
score: 3.3
IPR000198Rho GTPase-activating protein domainSMARTSM00324RhoGAP_3coord: 101..237
score: 5.
IPR000198Rho GTPase-activating protein domainPROFILEPS50238RHOGAPcoord: 90..246
score: 21
IPR008936Rho GTPase activation proteinunknownSSF48350GTPase activation domain, GAPcoord: 93..219
score: 4.32
NoneNo IPR availablePANTHERPTHR23176RHO/RAC/CDC GTPASE-ACTIVATING PROTEINcoord: 35..223
score: 3.5
NoneNo IPR availablePANTHERPTHR23176:SF32SUBFAMILY NOT NAMEDcoord: 35..223
score: 3.5