CmoCh04G003690 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G003690
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRibosomal protein L15
LocationCmo_Chr04 : 1797658 .. 1800033 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATTGCGCTTGCCCGAAGAAAAAACCCTAGCTCGATAACCAGACTTTTATACCTCAATTTTCTCTAACCTCATTCGTCTTCTCCGCCGAGCTCTGCAGAAATGGGTACGTACCTCTGCATCATCTCATTGTTATCCTTTACTCTAGATGTATTTCATAACTTCCTGCATTTTCATTCTCTAGCACAATTCATTCAGGTTTGTGTGTTGTCACTGGTTTTTGCTGAAGGTTTTGTGAAGTTTCTAGATCACTTCCTTGTTCCGTTTTCGTTTTTCTAGTTTTTTTTTTTTTTTTTTTTTTTAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTAATTATTCTTGAAAGTTCGTTATTTAAGTCCTGGTTATGCGTTCGACATTGATTTGGTGTTTTATCAGGTGCTTATAAGTACGTATCCGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTTTGCAAAGAGTGAGATGCTGGGAATATCGCCAGCACCCTTCAATCGTTCGTGTTACGCATCCCACTCGCCCGGATAAGGCTCGTCGATTAGGCTACAAGGCCAAACAGGTACATGAATCTCTGCACCTTTGACTCTCTGATACTTGCTTTATTATTGATTCTTGGTTTGAACTTCATGACATCTTCAAAATTTTAGAAGTAATGAGAAAGACATTGAGTTTTGTTTACTTTTGCTGTCCGCATTTCCTGAGTTAATTTCTTCATAATTTGTTTACATGTAGAAGTTGAATGTGATTCACATTCGACCCTTCTATGGTTTATGCGTCACTTGTGCTTTTCTTTATGCCTGACACGGATTACTCTTGATCTTTTCTTTAAAAAAATCGTGCGCATTGATTAAAAATAAATGTTATAAAATTGTTGCTTCACAATGTTTTTTAATGTTAATCGGGTGGAACGATTTGGTTCCCTAGGAAAAGAACAATGTTAGAACTGCATTGAGAAAATACTGTATCCTATCCACTCTTCTCTTCGGGAAGTTTCTATTTGATGAATGGTTCAAGTAGAAATAAGGGGAAAGTAGGATTTTTTTTTGCAATTGCTCGATTAATTACATTTGGTTAGAAGTAGTTTTGATATTTGTTTTGCATGAGAGAACGACTTATGTGCTTTTACTCTTACACGTAAAAACATAGATATGGAATATGTAAAACATGGATATTCACCATTTGAATCCTCATGGGTGACATAGTGCAATCATTTCATCATATTTGTCAACAAATTAGAAATCAATTTTTTTCTCATCTGTCTACTATTATGCATTTTCTTATTTTAGCAACAATTTTGTAGGGTTATGTTGTATACCGTGTACGTGTGAGGCGTGGTGGAAGGAAGAGGCCTGTTCCCAAGGGTATTGTATATGGTAAGCCAACAAACCAGGGTGTTACCCAGCTGAAGTTCCAACGCAGCAAGCGTTCAGTTGCCGAGGAACGTGCTGGCCGTAAGTTGGGTGGTCTTAGAGTTCTCAACTCCTACTGGATTAATGAGGTAACAAGCGATTATTATTAAGATGAAATAAAATGGACTTGACATTGACATGCACTTATTCCTCTTTTGGAACCAAACAAAGCCGATGTTTAGGAGAGTTGCATCTTAACCTTCCCATGTACAGTTTGCTAGAGTGTCTCTCATAATTTTCTCTTCATTACTGCAGGATTCAACATACAAATACTTTGAAGTGATCTTGGTTGATGTGGCTCACAATGCTGTTCGCAATGATCCAAGAATAAACTGGATCTGCAATCCTGTTCACAAGCACAGGGAACTTCGTGGTCTCACATCTGCTGGGAAGAAGTACAGAGGTCTTCGTGGAAAGGGTCATCTTCACCACAAGGCAAGACCTTCACGAAGGGCTACATGGAAAAGAAACAACACGCTCTCTCTTCGCCGCTACCGTTAATCTCAGCAACCTCATTAGATTACATCTCATCCTTGTATTTTGTCAAAAAAAAGAAACTTCCGTTCATCCAAGTTTTTGTTTAAATTTACTGTTAGCCAAACTGGGTTTTTCAAGTGTTTCATGCGGATGCATTTTTAGTTCTTTTCTTGAGAAAAACTTGAGTTCTTATTTTCACTGCAAGACTCTTGTTCATCATTTATTCTCTCCAAGCTTGAGTTTTTCCTCCAAAAATGCCAATGTCTGTTACTGATTAGGGAATTCAAGAACATTAGAGAATTCCAACTCATCCAGAAACCACTTCTTGAGCTTCTGAATTGTTCTTGTTAACAGCCATTGTGCAGGAGATTGAAATTTATCATCAACG

mRNA sequence

ATATATTGCGCTTGCCCGAAGAAAAAACCCTAGCTCGATAACCAGACTTTTATACCTCAATTTTCTCTAACCTCATTCGTCTTCTCCGCCGAGCTCTGCAGAAATGGGTGCTTATAAGTACGTATCCGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTTTGCAAAGAGTGAGATGCTGGGAATATCGCCAGCACCCTTCAATCGTTCGTGTTACGCATCCCACTCGCCCGGATAAGGCTCGTCGATTAGGCTACAAGGCCAAACAGGGTTATGTTGTATACCGTGTACGTGTGAGGCGTGGTGGAAGGAAGAGGCCTGTTCCCAAGGGTATTGTATATGGTAAGCCAACAAACCAGGGTGTTACCCAGCTGAAGTTCCAACGCAGCAAGCGTTCAGTTGCCGAGGAACGTGCTGGCCGTAAGTTGGGTGGTCTTAGAGTTCTCAACTCCTACTGGATTAATGAGGATTCAACATACAAATACTTTGAAGTGATCTTGGTTGATGTGGCTCACAATGCTGTTCGCAATGATCCAAGAATAAACTGGATCTGCAATCCTGTTCACAAGCACAGGGAACTTCGTGGTCTCACATCTGCTGGGAAGAAGTACAGAGGTCTTCGTGGAAAGGGTCATCTTCACCACAAGGCAAGACCTTCACGAAGGGCTACATGGAAAAGAAACAACACGCTCTCTCTTCGCCGCTACCGTTAATCTCAGCAACCTCATTAGATTACATCTCATCCTTGTATTTTGTCAAAAAAAAGAAACTTCCGTTCATCCAAGTTTTTGTTTAAATTTACTGTTAGCCAAACTGGGTTTTTCAAGTGTTTCATGCGGATGCATTTTTAGTTCTTTTCTTGAGAAAAACTTGAGTTCTTATTTTCACTGCAAGACTCTTGTTCATCATTTATTCTCTCCAAGCTTGAGTTTTTCCTCCAAAAATGCCAATGTCTGTTACTGATTAGGGAATTCAAGAACATTAGAGAATTCCAACTCATCCAGAAACCACTTCTTGAGCTTCTGAATTGTTCTTGTTAACAGCCATTGTGCAGGAGATTGAAATTTATCATCAACG

Coding sequence (CDS)

ATGGGTGCTTATAAGTACGTATCCGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTTTGCAAAGAGTGAGATGCTGGGAATATCGCCAGCACCCTTCAATCGTTCGTGTTACGCATCCCACTCGCCCGGATAAGGCTCGTCGATTAGGCTACAAGGCCAAACAGGGTTATGTTGTATACCGTGTACGTGTGAGGCGTGGTGGAAGGAAGAGGCCTGTTCCCAAGGGTATTGTATATGGTAAGCCAACAAACCAGGGTGTTACCCAGCTGAAGTTCCAACGCAGCAAGCGTTCAGTTGCCGAGGAACGTGCTGGCCGTAAGTTGGGTGGTCTTAGAGTTCTCAACTCCTACTGGATTAATGAGGATTCAACATACAAATACTTTGAAGTGATCTTGGTTGATGTGGCTCACAATGCTGTTCGCAATGATCCAAGAATAAACTGGATCTGCAATCCTGTTCACAAGCACAGGGAACTTCGTGGTCTCACATCTGCTGGGAAGAAGTACAGAGGTCTTCGTGGAAAGGGTCATCTTCACCACAAGGCAAGACCTTCACGAAGGGCTACATGGAAAAGAAACAACACGCTCTCTCTTCGCCGCTACCGTTAA
BLAST of CmoCh04G003690 vs. Swiss-Prot
Match: RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.1e-107
Identity = 190/204 (93.14%), Postives = 195/204 (95.59%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVT PTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRV+RGGRKRPVPKGIVYGKPTNQGVTQLKFQR+KRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVD AH A+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           H+KA PSRRA WKRN TLSL RYR
Sbjct: 181 HNKAPPSRRANWKRNQTLSLPRYR 204

BLAST of CmoCh04G003690 vs. Swiss-Prot
Match: RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.1e-107
Identity = 184/204 (90.20%), Postives = 195/204 (95.59%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+THPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKY+EV+LVD AH  +RNDPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. Swiss-Prot
Match: RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 6.9e-107
Identity = 187/204 (91.67%), Postives = 196/204 (96.08%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKY+E+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN+LSLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204

BLAST of CmoCh04G003690 vs. Swiss-Prot
Match: RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-106
Identity = 186/204 (91.18%), Postives = 196/204 (96.08%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKY+E+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN++SLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204

BLAST of CmoCh04G003690 vs. Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 2.9e-105
Identity = 182/204 (89.22%), Postives = 195/204 (95.59%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRVT P+RPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKY+E+ILVD AH+A+R DPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. TrEMBL
Match: A0A0A0KU38_CUCSA (Ribosomal protein L15 OS=Cucumis sativus GN=Csa_3G112770 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 2.6e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. TrEMBL
Match: A9PAV0_POPTR (Ribosomal protein L15 OS=Populus trichocarpa GN=POPTR_0003s07630g PE=2 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 2.6e-113
Identity = 200/204 (98.04%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVDVAHNA+RNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRA WKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRANWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. TrEMBL
Match: A9PC51_POPTR (Ribosomal protein L15 OS=Populus trichocarpa GN=POPTR_0001s15590g PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-113
Identity = 199/204 (97.55%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYR+RVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRIRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVDVAHNA+RNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRA WKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRANWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. TrEMBL
Match: A0A0D2PUM3_GOSRA (Ribosomal protein L15 OS=Gossypium raimondii GN=B456_001G049600 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 7.7e-113
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVD AHNA+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDPAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. TrEMBL
Match: A0A0B0PCZ3_GOSAR (Ribosomal protein L15 OS=Gossypium arboreum GN=F383_08565 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 7.7e-113
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVD AHNA+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDPAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. TAIR10
Match: AT4G16720.1 (AT4G16720.1 Ribosomal protein L23/L15e family protein)

HSP 1 Score: 387.9 bits (995), Expect = 3.9e-108
Identity = 187/204 (91.67%), Postives = 196/204 (96.08%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKY+E+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN+LSLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204

BLAST of CmoCh04G003690 vs. TAIR10
Match: AT4G17390.1 (AT4G17390.1 Ribosomal protein L23/L15e family protein)

HSP 1 Score: 387.1 bits (993), Expect = 6.7e-108
Identity = 186/204 (91.18%), Postives = 196/204 (96.08%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKY+E+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GKK RGLRGKGH 
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HK RPSRRATWK+NN++SLRRYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204

BLAST of CmoCh04G003690 vs. NCBI nr
Match: gi|449458361|ref|XP_004146916.1| (PREDICTED: 60S ribosomal protein L15-1 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. NCBI nr
Match: gi|566161423|ref|XP_002304285.2| (60S ribosomal protein L15 [Populus trichocarpa])

HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-113
Identity = 200/204 (98.04%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVDVAHNA+RNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRA WKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRANWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. NCBI nr
Match: gi|566149188|ref|XP_006369001.1| (60S ribosomal protein L15 [Populus trichocarpa])

HSP 1 Score: 415.6 bits (1067), Expect = 5.0e-113
Identity = 199/204 (97.55%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYR+RVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 61  VYRIRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVDVAHNA+RNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRA WKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRANWKRNNTLSLRRYR 204

BLAST of CmoCh04G003690 vs. NCBI nr
Match: gi|743864397|ref|XP_011031909.1| (PREDICTED: 60S ribosomal protein L15 isoform X1 [Populus euphratica])

HSP 1 Score: 414.5 bits (1064), Expect = 1.1e-112
Identity = 199/204 (97.55%), Postives = 203/204 (99.51%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           +GAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV
Sbjct: 3   IGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 62

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW
Sbjct: 63  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 122

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVDVAHNA+RNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 123 INEDSTYKYFEVILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHL 182

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRA WKRNNTLSLRRYR
Sbjct: 183 HHKARPSRRANWKRNNTLSLRRYR 206

BLAST of CmoCh04G003690 vs. NCBI nr
Match: gi|823121420|ref|XP_012466674.1| (PREDICTED: 60S ribosomal protein L15-1-like [Gossypium raimondii])

HSP 1 Score: 414.5 bits (1064), Expect = 1.1e-112
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 1

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYFEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYFEVILVD AHNA+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDPAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RL15_PETHY3.1e-10793.1460S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1[more]
RL15B_PICMA4.1e-10790.2060S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1[more]
RL151_ARATH6.9e-10791.6760S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1[more]
RL152_ARATH1.2e-10691.1860S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1[more]
RL15A_PICMA2.9e-10589.2260S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KU38_CUCSA2.6e-11398.53Ribosomal protein L15 OS=Cucumis sativus GN=Csa_3G112770 PE=3 SV=1[more]
A9PAV0_POPTR2.6e-11398.04Ribosomal protein L15 OS=Populus trichocarpa GN=POPTR_0003s07630g PE=2 SV=1[more]
A9PC51_POPTR3.5e-11397.55Ribosomal protein L15 OS=Populus trichocarpa GN=POPTR_0001s15590g PE=2 SV=1[more]
A0A0D2PUM3_GOSRA7.7e-11398.04Ribosomal protein L15 OS=Gossypium raimondii GN=B456_001G049600 PE=3 SV=1[more]
A0A0B0PCZ3_GOSAR7.7e-11398.04Ribosomal protein L15 OS=Gossypium arboreum GN=F383_08565 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G16720.13.9e-10891.67 Ribosomal protein L23/L15e family protein[more]
AT4G17390.16.7e-10891.18 Ribosomal protein L23/L15e family protein[more]
Match NameE-valueIdentityDescription
gi|449458361|ref|XP_004146916.1|3.8e-11398.53PREDICTED: 60S ribosomal protein L15-1 [Cucumis sativus][more]
gi|566161423|ref|XP_002304285.2|3.8e-11398.0460S ribosomal protein L15 [Populus trichocarpa][more]
gi|566149188|ref|XP_006369001.1|5.0e-11397.5560S ribosomal protein L15 [Populus trichocarpa][more]
gi|743864397|ref|XP_011031909.1|1.1e-11297.55PREDICTED: 60S ribosomal protein L15 isoform X1 [Populus euphratica][more]
gi|823121420|ref|XP_012466674.1|1.1e-11298.04PREDICTED: 60S ribosomal protein L15-1-like [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000439Ribosomal_L15e
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR020925Ribosomal_L15e_CS
IPR024794Rbsml_L15e_core_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006869 lipid transport
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005319 lipid transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G003690.1CmoCh04G003690.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000439Ribosomal protein L15ePANTHERPTHR11847RIBOSOMAL PROTEIN L15coord: 2..204
score: 9.0E
IPR000439Ribosomal protein L15ePFAMPF00827Ribosomal_L15ecoord: 2..190
score: 5.2
IPR000439Ribosomal protein L15eSMARTSM01384Ribosomal_L15e_2coord: 2..193
score: 1.2E
IPR012678Ribosomal protein L23/L15e core domainunknownSSF54189Ribosomal proteins S24e, L23 and L15ecoord: 1..195
score: 4.12
IPR020925Ribosomal protein L15e, conserved sitePROSITEPS01194RIBOSOMAL_L15Ecoord: 46..69
scor
IPR024794Ribosomal protein L15e core domainGENE3DG3DSA:3.40.1120.10coord: 1..195
score: 1.2E