CsaV3_4G004050 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G004050
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRibosomal protein L15
Locationchr4 : 2494807 .. 2496897 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGATGGTGAAGATGAGACAATGATACAAATGATTTATATATAAACTAGGGTTTCGAACGCAAACCCTAGCCGGTGTGTCTTCAGCAGCCTGACGTTTCTTTCCAATGGGTATGTCTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTTTTCTCGTTTAAATTTTCCAATGGGTATGTCTATTATTTTTCTTCTTCCTTTCTTCTTTTTCTCGTTTAAATTTTCAGCGTTTGAGTAGCTTTCCCCCCAAGTTTTGAATGTGTTCTTACTATCTTCATAATCTTTCTATTGTTTAGGGAGGAGCTTTGATTAGAGTGTATAATGGTTTTGTTTGATGTAAAGTTTTTTTTTATCACATTTTGATTATTCTAGCTTCTTTGCGGCATTTGGTTAAATGTTATATTTCTCTTTATTTTTTTTTACTATGTTCAAAATCTTTCAGTTTAGATTGTTTGTGCAGGAGCCTATATTAGATTGTTGTATGTTTATGTTTGATGAAAATTTAATAGTTTCTTCTTTTTATGTTTTTTTTTTGTTTTGCTTGGTTCCCATCATTTGTAATTTGGAAAAATAGGGGCGTACAAGTACGTGTCAGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTCTCCAGAGGGTCAGATGCTGGGAATATCGCCAACATCCATCGATTGTCCGCGTCAACCATCCCACTCGCCCGGATAAAGCTCGGCGTCTTGGTTACAAAGCCAAACAGGTAAGAAAATATATTAACATTTCCTTATAAAGTTTGTTGTATCTAAGCCTTCATGAGTTTTTTTCCTAGGTGATTTGGTCAGCATATTTTCAGTATATGTCGTTGAAATTTTTGGTATCCTTGTTATATTTTGTTCCTAATGTACACTCTTTAATTAGGAATTTTTGTTGTCTGCGTCTGCTACCATTTTGATAGCACAAGGAATATTTTCTGTTATTAGTATTTGGTTTGAGTATTACACATTGAGGTTTTACCCTATTAGGATTATTTTCCTAGGAGAAAAGATAATTATGATGTAACCAACCTTTTGACAAAAGAGCTGATATGCACAGTCCTCTCTTATAATTTCTTGTTGAGTGTTCATTTTTTTCTCAGTATGGTGTTGATATCATTTGCTTCACCTGCAATAGTGATTGGTGAGTGAACTTTTTTGTTGCAGGGTTATGTGGTTTACAGGGTCCGAGTGAGACGTGGTGGTAGGAAGAGGCCTGTTCCTAAGGGTATTGTGTATGGGAAGCCCACAAACCAGGGTGTTACCCAATTGAAATTCCAGCGCAGCAAGCGATCGGTTGCAGAAGAACGGGCAGGGCGAAAGCTGGGTGGTTTGAGAGTTGTAAATTCTTACTGGATCAACGAGGTAATTTTCTATAAAATTGAGGATATAACATCGTAAATCCTTGTGGATCGTTTTCTGACTGTTACCAAAATTGTTATAGGATTCTACCTACAAATACTATGAAGTGATTTTGGTTGATGTTGCCCATAATGCGGTTCGCAATGACCCGAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTCAGAGGACTCACATCAGCTGGCAAGAAGTACAGGGGTCTTCGAGGAAAAGGACATTTGCACCACAAAGCCAGGCCTTCTCGCCGAGCAACCTGGAAGAGGAACAACACTCTCTCGCTGCGTCGATACCGTTGATTTTGGTATTGTTTTCTTCTGTTTTGGTATTTTTATTATGAGCATTCTGTTGGTTGAGGAATGTAGTGGAAGTTGCTTCAATCTAAAAAGTTTTGAACTTCATAATTTACATTGAGATTTGTCAGGATGTTTCTAAACTAAACCAAGTATCAACTTTTGTGTTCATTGCAATTATTGTATTTTTTTTTATATCTGGTTACCATTTTTGTTCCCACAGGTTTGGATGGAAGTATCTGTTATTTGTTTGTTTATGCGATTAAGAAAACTTGTGTGCTTCAGCAAGTCCAAAAATGTATTAAATTTAGGTTCTTAATATGTTTTAAAATTAAGCCTTCTATATTGTTGCCCATTTTTATCGTGTTCGGTTGAAAAAAAATCAATCAAG

mRNA sequence

ATGGGGGCGTACAAGTACGTGTCAGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTCTCCAGAGGGTCAGATGCTGGGAATATCGCCAACATCCATCGATTGTCCGCGTCAACCATCCCACTCGCCCGGATAAAGCTCGGCGTCTTGGTTACAAAGCCAAACAGGGTTATGTGGTTTACAGGGTCCGAGTGAGACGTGGTGGTAGGAAGAGGCCTGTTCCTAAGGGTATTGTGTATGGGAAGCCCACAAACCAGGGTGTTACCCAATTGAAATTCCAGCGCAGCAAGCGATCGGTTGCAGAAGAACGGGCAGGGCGAAAGCTGGGTGGTTTGAGAGTTGTAAATTCTTACTGGATCAACGAGGATTCTACCTACAAATACTATGAAGTGATTTTGGTTGATGTTGCCCATAATGCGGTTCGCAATGACCCGAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTCAGAGGACTCACATCAGCTGGCAAGAAGTACAGGGGTCTTCGAGGAAAAGGACATTTGCACCACAAAGCCAGGCCTTCTCGCCGAGCAACCTGGAAGAGGAACAACACTCTCTCGCTGCGTCGATACCGTTGA

Coding sequence (CDS)

ATGGGGGCGTACAAGTACGTGTCAGAGCTATGGAGGAAGAAGCAGTCCGATGTGATGAGGTTTCTCCAGAGGGTCAGATGCTGGGAATATCGCCAACATCCATCGATTGTCCGCGTCAACCATCCCACTCGCCCGGATAAAGCTCGGCGTCTTGGTTACAAAGCCAAACAGGGTTATGTGGTTTACAGGGTCCGAGTGAGACGTGGTGGTAGGAAGAGGCCTGTTCCTAAGGGTATTGTGTATGGGAAGCCCACAAACCAGGGTGTTACCCAATTGAAATTCCAGCGCAGCAAGCGATCGGTTGCAGAAGAACGGGCAGGGCGAAAGCTGGGTGGTTTGAGAGTTGTAAATTCTTACTGGATCAACGAGGATTCTACCTACAAATACTATGAAGTGATTTTGGTTGATGTTGCCCATAATGCGGTTCGCAATGACCCGAGAATCAACTGGATCTGCAATCCAGTCCACAAGCACAGGGAGCTCAGAGGACTCACATCAGCTGGCAAGAAGTACAGGGGTCTTCGAGGAAAAGGACATTTGCACCACAAAGCCAGGCCTTCTCGCCGAGCAACCTGGAAGAGGAACAACACTCTCTCGCTGCGTCGATACCGTTGA

Protein sequence

MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWINEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNTLSLRRYR
Homology
[Close]
BLAST of CsaV3_4G004050 vs. NCBI nr
Match: XP_004146916.1 (PREDICTED: 60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650580.1 PREDICTED: 60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650582.1 PREDICTED: 60S ribosomal protein L15-1 [Cucumis sativus] >KGN53150.1 hypothetical protein Csa_4G022860 [Cucumis sativus] >KGN56283.1 hypothetical protein Csa_3G112770 [Cucumis sativus] >KGN56284.1 hypothetical protein Csa_3G112780 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 1.4e-114
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. NCBI nr
Match: XP_022957930.1 (60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022922395.1 60S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022972988.1 60S ribosomal protein L15-2-like [Cucurbita maxima] >XP_023521483.1 60S ribosomal protein L15-2 [Cucurbita pepo subsp. pepo] >XP_023533846.1 60S ribosomal protein L15-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533847.1 60S ribosomal protein L15-2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.6 bits (1080), Expect = 3.0e-114
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. NCBI nr
Match: XP_022141052.1 (60S ribosomal protein L15-2 [Momordica charantia] >XP_022154831.1 60S ribosomal protein L15-2 [Momordica charantia])

HSP 1 Score: 418.3 bits (1074), Expect = 1.5e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRV HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. NCBI nr
Match: XP_022996180.1 (60S ribosomal protein L15-2 [Cucurbita maxima])

HSP 1 Score: 418.3 bits (1074), Expect = 1.5e-113
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ+PSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQYPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. NCBI nr
Match: XP_008437057.1 (PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo] >XP_008453903.1 PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo])

HSP 1 Score: 417.9 bits (1073), Expect = 1.9e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNA+RNDPRI WICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAIRNDPRIKWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TAIR10
Match: AT4G17390.1 (Ribosomal protein L23/L15e family protein)

HSP 1 Score: 356.3 bits (913), Expect = 1.3e-98
Identity = 175/204 (85.78%), Postives = 182/204 (89.22%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GK           
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKXXXXXXXXXXX 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
                 SRRATWK+NN++SLRRYR
Sbjct: 181 XXXXXXSRRATWKKNNSISLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TAIR10
Match: AT4G16720.1 (Ribosomal protein L23/L15e family protein)

HSP 1 Score: 354.8 bits (909), Expect = 3.7e-98
Identity = 175/204 (85.78%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS G            
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGXXXXXXXXXXXX 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
                 SRRATWK+NN+LSLRRYR
Sbjct: 181 XXXXXXSRRATWKKNNSLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. Swiss-Prot
Match: sp|O65082|RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana OX=3335 GN=SB62 PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.1e-107
Identity = 183/204 (89.71%), Postives = 194/204 (95.10%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+ HPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKYYEV+LVD AH  +RNDPRINWICN VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. Swiss-Prot
Match: sp|O82528|RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 3.5e-106
Identity = 187/204 (91.67%), Postives = 194/204 (95.10%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRV  PTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRV+RGGRKRPVPKGIVYGKPTNQGVTQLKFQR+KRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVILVD AH A+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           H+KA PSRRA WKRN TLSL RYR
Sbjct: 181 HNKAPPSRRANWKRNQTLSLPRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. Swiss-Prot
Match: sp|O65050|RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.7e-98
Identity = 172/204 (84.31%), Postives = 185/204 (90.69%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRV  P+RPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           IN+DSTYKYYE+ILVD AH+A+R DPRINWICN VHKHRELRGLTSA         +GHL
Sbjct: 121 INQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAXXXXXXXXXRGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           +HKARPS+RATWKRNNTLSLRRYR
Sbjct: 181 YHKARPSKRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. Swiss-Prot
Match: sp|Q8VYF1|RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana OX=3702 GN=RPL15B PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.3e-97
Identity = 175/204 (85.78%), Postives = 182/204 (89.22%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS GK           
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKXXXXXXXXXXX 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
                 SRRATWK+NN++SLRRYR
Sbjct: 181 XXXXXXSRRATWKKNNSISLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. Swiss-Prot
Match: sp|O23515|RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana OX=3702 GN=RPL15A PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 6.6e-97
Identity = 175/204 (85.78%), Postives = 181/204 (88.73%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+  PTRPDKARRLGYKAKQG+V
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           +NEDSTYKYYE+ILVD AHNAVRNDPRINWICNPVHKHRELRGLTS G            
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGXXXXXXXXXXXX 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
                 SRRATWK+NN+LSLRRYR
Sbjct: 181 XXXXXXSRRATWKKNNSLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TrEMBL
Match: tr|A0A0A0KU38|A0A0A0KU38_CUCSA (Ribosomal protein L15 OS=Cucumis sativus OX=3659 GN=Csa_3G112770 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 8.9e-115
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TrEMBL
Match: tr|A0A1S3ATM3|A0A1S3ATM3_CUCME (Ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103482598 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNA+RNDPRI WICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAIRNDPRIKWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TrEMBL
Match: tr|A0A1U8P2A4|A0A1U8P2A4_GOSHI (Ribosomal protein L15 OS=Gossypium hirsutum OX=3635 GN=LOC107953634 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVILVD AHNA+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDPAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TrEMBL
Match: tr|A0A0B0PCZ3|A0A0B0PCZ3_GOSAR (Ribosomal protein L15 OS=Gossypium arboreum OX=29729 GN=F383_08565 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-113
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKY+EVILVD AHNA+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYFEVILVDPAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

[Close]
BLAST of CsaV3_4G004050 vs. TrEMBL
Match: tr|A0A0A0KKP5|A0A0A0KKP5_CUCSA (Ribosomal protein L15 OS=Cucumis sativus OX=3659 GN=Csa_5G162630 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.7e-113
Identity = 202/204 (99.02%), Postives = 203/204 (99.51%), Query Frame = 0 

Query: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVNHPTRPDKARRLGYKAKQGYV 60

Query: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
           VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRV+NSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGKGHL 180
           INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHK RELRGLTSAGKKYRGLRGKGHL
Sbjct: 121 INEDSTYKYYEVILVDVAHNAVRNDPRINWICNPVHKRRELRGLTSAGKKYRGLRGKGHL 180

Query: 181 HHKARPSRRATWKRNNTLSLRRYR 205
           HHKARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204

The following BLAST results are available for this feature:
BLAST of CsaV3_4G004050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146916.11.4e-114100.00PREDICTED: 60S ribosomal protein L15-1 [Cucumis sativus] >XP_011650580.1 PREDICT... [more]
XP_022957930.13.0e-11499.5160S ribosomal protein L15-2-like [Cucurbita moschata] >XP_022922395.1 60S riboso... [more]
XP_022141052.11.5e-11399.0260S ribosomal protein L15-2 [Momordica charantia] >XP_022154831.1 60S ribosomal ... [more]
XP_022996180.11.5e-11399.0260S ribosomal protein L15-2 [Cucurbita maxima][more]
XP_008437057.11.9e-11398.53PREDICTED: 60S ribosomal protein L15-2 [Cucumis melo] >XP_008453903.1 PREDICTED:... [more]
BLAST of CsaV3_4G004050 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17390.11.3e-9885.78Ribosomal protein L23/L15e family protein[more]
AT4G16720.13.7e-9885.78Ribosomal protein L23/L15e family protein[more]
BLAST of CsaV3_4G004050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O65082|RL15B_PICMA7.1e-10789.7160S ribosomal protein L15-2 OS=Picea mariana OX=3335 GN=SB62 PE=2 SV=1[more]
sp|O82528|RL15_PETHY3.5e-10691.6760S ribosomal protein L15 OS=Petunia hybrida OX=4102 GN=RPL15 PE=2 SV=1[more]
sp|O65050|RL15A_PICMA2.7e-9884.3160S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1[more]
sp|Q8VYF1|RL152_ARATH2.3e-9785.7860S ribosomal protein L15-2 OS=Arabidopsis thaliana OX=3702 GN=RPL15B PE=2 SV=1[more]
sp|O23515|RL151_ARATH6.6e-9785.7860S ribosomal protein L15-1 OS=Arabidopsis thaliana OX=3702 GN=RPL15A PE=2 SV=1[more]
BLAST of CsaV3_4G004050 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KU38|A0A0A0KU38_CUCSA8.9e-115100.00Ribosomal protein L15 OS=Cucumis sativus OX=3659 GN=Csa_3G112770 PE=3 SV=1[more]
tr|A0A1S3ATM3|A0A1S3ATM3_CUCME1.3e-11398.53Ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103482598 PE=3 SV=1[more]
tr|A0A1U8P2A4|A0A1U8P2A4_GOSHI1.7e-11398.53Ribosomal protein L15 OS=Gossypium hirsutum OX=3635 GN=LOC107953634 PE=3 SV=1[more]
tr|A0A0B0PCZ3|A0A0B0PCZ3_GOSAR1.7e-11398.53Ribosomal protein L15 OS=Gossypium arboreum OX=29729 GN=F383_08565 PE=3 SV=1[more]
tr|A0A0A0KKP5|A0A0A0KKP5_CUCSA1.7e-11399.02Ribosomal protein L15 OS=Cucumis sativus OX=3659 GN=Csa_5G162630 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR020925Ribosomal_L15e_CS
IPR024794Rbsml_L15e_core_dom_sf
IPR000439Ribosomal_L15e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G004050.1CsaV3_4G004050.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000439Ribosomal protein L15eSMARTSM01384Ribosomal_L15e_2coord: 2..193
e-value: 7.0E-142
score: 487.3
IPR000439Ribosomal protein L15ePFAMPF00827Ribosomal_L15ecoord: 2..190
e-value: 4.7E-94
score: 313.4
IPR000439Ribosomal protein L15ePANTHERPTHR11847RIBOSOMAL PROTEIN L15coord: 1..204
IPR024794Ribosomal protein L15e core domain superfamilyGENE3DG3DSA:3.40.1120.10coord: 1..197
e-value: 4.0E-110
score: 367.9
NoneNo IPR availablePANTHERPTHR11847:SF12SUBFAMILY NOT NAMEDcoord: 1..204
IPR020925Ribosomal protein L15e, conserved sitePROSITEPS01194RIBOSOMAL_L15Ecoord: 46..69
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILYSSF54189Ribosomal proteins S24e, L23 and L15ecoord: 1..195