CmoCh04G000550 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G000550
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium-dependent lipid-binding (CaLB domain) family protein
Location	Cmo_Chr04 : 306494 .. 308308 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTTCTTCTATATGAAGATTATTTACAATTTTATAAATATTACAAATCTCTTCCTCTGTTCCGTTGTATATATTTCGGTTCTCTTCTCAAAATCTTCGACGACAAGGGGAAGTGCTGAAGGACATGCGAAGATTTTGAAATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTCTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGGTTCCTTCTTCCGCTTCCGATTCATATTCACCGATCTCTCTTCCACGCATCCCGTTATAGGATATTTGTTTGTTCAAGTGTTAACGGTCCGGATTTGGATTTGGATTTGGATTCTTATTTTTTGGAACTTTCTGAGGAATATTTGTCAAAATTTTCCGGTTTTTTCTTATTTTCCCGTTCGAATTTCCTTTCAAAACTTGCGAGCTGTTCGAATTCGGATTGCGACTTTCAGATTTTAAGCTTCTGTTCGGATTTTCTGTTTCGACTTCTGATTGTAATTTCTTTCTTTTGACTTTCCTTCGAAATCTTCGTCAAATTTGTCCATTTTTAGGTTTTCGCTGTTTAGATTTTCCCTTTCTTAACTGTGCTAGTGGCTTGAATTCTGATTGCGAATATTTGTCGATTTTTTCAGTATTTAGGTTTTTTGTTCGGATTTTCCCTCTCAAATCTATCCAAACAGATCAAATTCTGATGGCGCTTTCTTCCTTGCAAAATATTCGTCGAACTTTTCCGCGTTAAAATTCTTTTTCTCGGTTTTTTCCTTTCGAAACTATGCAACCGATTCTGATTGCAGATTGCAATTTCTCCGTAACTTCCATCGGAAGATCTCGGAATATTCATGAAGTTTATTCGTTTTTTCTTTTTCATTGATCTTATGGCATGACTCTTTTGATACTAATTTTTTGTACAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACACTCTCAATTACGGACATCAACACACCAATCAAATTAGTAAGTCAAATCACACGCTTTTAAACCGAGAAATTCAGACAATCTTCCAAACTTGTGATCAAACATTAAACAAATCACTGGCATTTGTTTCCATCACTGGATTCTCAGGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCGAAGGGTTGTGTGGTGAAAAGGGTCCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATTCAAGACATGACTCTCAGATTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGAAAAACATCGCCTCCTCCTTCGATTTCATGTTTCCGTGTTCGTCATTGCGATGCTCTGTTCCTGCTCCGCTTTCTCATTTCACACCAATTCCAGAAATCAGATACGTTTGATTTAGTCGTGAATGTAAATTTGCATTGTGTGTGTTTCTTGTGAAATGATTTTGGTTGGCCTACAAGAAGTTTGTACCCCCCCTAGATTATTGGTTCATTTGAATGTTATTTTTTCCATTGTTATATTGCGTACGAATTTGAGGCGTGGACAAATATTAATTCTCTGTAGTAGCTACTGATTGTGTGAATTGATTCATTGTCTTGGAGAAATCATCATATTGAACTCGTTTCTTTACATATATA

mRNA sequence

AAGCTTCTTCTATATGAAGATTATTTACAATTTTATAAATATTACAAATCTCTTCCTCTGTTCCGTTGTATATATTTCGGTTCTCTTCTCAAAATCTTCGACGACAAGGGGAAGTGCTGAAGGACATGCGAAGATTTTGAAATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTCTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACACTCTCAATTACGGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCGAAGGGTTGTGTGGTGAAAAGGGTCCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATTCAAGACATGACTCTCAGATTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGAAAAACATCGCCTCCTCCTTCGATTTCATGTTTCCGTGTTCGTCATTGCGATGCTCTGTTCCTGCTCCGCTTTCTCATTTCACACCAATTCCAGAAATCAGATACGTTTGATTTAGTCGTGAATGTAAATTTGCATTGTGTGTGTTTCTTGTGAAATGATTTTGGTTGGCCTACAAGAAGTTTGTACCCCCCCTAGATTATTGGTTCATTTGAATGTTATTTTTTCCATTGTTATATTGCGTACGAATTTGAGGCGTGGACAAATATTAATTCTCTGTAGTAGCTACTGATTGTGTGAATTGATTCATTGTCTTGGAGAAATCATCATATTGAACTCGTTTCTTTACATATATA

Coding sequence (CDS)

ATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTCTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACACTCTCAATTACGGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCGAAGGGTTGTGTGGTGAAAAGGGTCCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATTCAAGACATGACTCTCAGATTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGA

Homology

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BLAST of CmoCh04G000550 vs. Swiss-Prot
Match: CAR10_ARATH (Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana GN=CAR10 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-53
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 1


Query: 6   GLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSITDI 65
           GLL I + RGINLAIRD   RSSDPY+V++ A+Q  K+RVVKKNCNP WNEE T++I D 
Sbjct: 7   GLLTIHVKRGINLAIRDH--RSSDPYIVLNVADQTLKTRVVKKNCNPVWNEEMTVAIKDP 66

Query: 66  NTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLE--SLPKGCVVKRVQPSRSNNL 125
           N PI+L VFD D+FT DD MGDA IDI+PY+E L MG+E   LP GC +KRVQPSR N L
Sbjct: 67  NVPIRLTVFDWDKFTGDDKMGDANIDIQPYLEALKMGMELLRLPNGCAIKRVQPSRHNCL 126

Query: 126 ADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYS 172
           +DES  VWN+GKI QD+ LRL NVECGEI I ++    +G +G+ + S
Sbjct: 127 SDESSIVWNNGKITQDLILRLNNVECGEIEIMLEWHEGAGCRGITSSS 172

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BLAST of CmoCh04G000550 vs. Swiss-Prot
Match: CAR9_ARATH (Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana GN=CAR9 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.2e-52
Identity = 95/164 (57.93%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 6   GLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSITDI 65
           G+LR+ + RGINLAIRDA T  SDPYVVI+ ANQK K+RV+  NCNP WNE+ TLSI D+
Sbjct: 7   GILRVHVKRGINLAIRDATT--SDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDV 66

Query: 66  NTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGL--ESLPKGCVVKRVQPSRSNNL 125
           N PI+L VFDKDRF+ DD MGDAEID +P++E   M L  + LP GC +KR++P R+N L
Sbjct: 67  NDPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCL 126

Query: 126 ADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           A+ES   W++GKI+Q+M LRL+NVECGE+ + ++  +  G KG+
Sbjct: 127 AEESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGPGCKGL 168

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BLAST of CmoCh04G000550 vs. Swiss-Prot
Match: CAR4_ARATH (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-49
Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+ RG+NLA+RD    SSDPYVV+    QK K+RV+ K+ NP+WNE+ TL
Sbjct: 13  MDDLLGLLRIRIKRGVNLAVRDIS--SSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTL 72

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           S+TD N  + L V+D D F+KDD MGDAE +IKPYIE L M L+ LP G +V  V+PSR 
Sbjct: 73  SVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRR 132

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LA+ES   W DGK++QD+ LRL++VECGE+  Q+Q  +  G KG+
Sbjct: 133 NCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177

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BLAST of CmoCh04G000550 vs. Swiss-Prot
Match: CAR5_ARATH (Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana GN=CAR5 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-48
Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+ RG+NLA+RD    SSDPYVV+  A QK K+RV+ KN NP+WNE+ TL
Sbjct: 37  MDSLLGLLRIRIKRGVNLAVRDL--NSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTL 96

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           S++D N  + L V+D D FTKDD MGDAE  IKP++  L M L  LP G +V  VQPSR 
Sbjct: 97  SVSDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRD 156

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LA+ES  +W+DGK++QD+ LRL++VECGE+  Q+Q  +  G KG+
Sbjct: 157 NCLAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLPG-KGL 200

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BLAST of CmoCh04G000550 vs. Swiss-Prot
Match: CAR7_ARATH (Protein C2-DOMAIN ABA-RELATED 7 OS=Arabidopsis thaliana GN=CAR7 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 8.9e-47
Identity = 92/167 (55.09%), Postives = 121/167 (72.46%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M    GLLRIR+ RGINLA RD  T SSDP+VVI+  +QK K+RVV+ NCNP+WNEE TL
Sbjct: 1   MEELVGLLRIRVKRGINLAQRD--TLSSDPFVVITMGSQKLKTRVVENNCNPEWNEELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           ++   + P+ L V+DKD FT  D MGDA+IDIKP++E   MGL+ LP G  +KRV P+R 
Sbjct: 61  ALRHPDEPVNLIVYDKDTFTSHDKMGDAKIDIKPFLEVHKMGLQELPDGTEIKRVVPNRE 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LA+ S  V N+GKI+Q+M L L+NVECGE+ IQ++  +  G +G+
Sbjct: 121 NCLAEASSIVSNNGKIVQNMILLLRNVECGEVEIQLEWIDIPGSRGL 165

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BLAST of CmoCh04G000550 vs. TrEMBL
Match: A0A0A0KJA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G030450 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-84
Identity = 151/171 (88.30%), Postives = 164/171 (95.91%), Query Frame = 1


Query: 3   NRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSI 62
           NR+GLLRIRLLRG NLAIRDAPTRSSDPYVVI++ANQKFKSRVVKKNCNP+WNEEFTLS+
Sbjct: 5   NRSGLLRIRLLRGHNLAIRDAPTRSSDPYVVITSANQKFKSRVVKKNCNPEWNEEFTLSV 64

Query: 63  TDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRSNN 122
           TD+NTPIKLAVFDKDRFTKDDGMGDAEIDIKPY+ECLNMGLE+LP GCVVKRVQPSRSN+
Sbjct: 65  TDVNTPIKLAVFDKDRFTKDDGMGDAEIDIKPYMECLNMGLENLPNGCVVKRVQPSRSNS 124

Query: 123 LADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS 174
           LADESPCVWNDGKI+QDMTLRLQNVECGEI IQ+QLFN S  +G RTYSL+
Sbjct: 125 LADESPCVWNDGKIVQDMTLRLQNVECGEIMIQLQLFNVSIFRGRRTYSLA 175

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BLAST of CmoCh04G000550 vs. TrEMBL
Match: A0A0A0KRJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569360 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-58
Identity = 109/173 (63.01%), Postives = 136/173 (78.61%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+LRG+NLAIRD  TRSSDPYV+++  +Q+ K+RVVK NCNP+WN+E TL
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRD--TRSSDPYVLVTMGDQRLKTRVVKNNCNPEWNDELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           S+ D+ TPI L+V+DKD  T  D MGDAEIDI PYIECL MGL+SLP GCVV+R+ PSR+
Sbjct: 61  SVADLRTPIGLSVYDKDTLTDHDKMGDAEIDIGPYIECLRMGLQSLPDGCVVRRLYPSRT 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS 174
           N LADES CVW  GKI+Q+M LRL+N ECGE+A+Q++  N  G KG+   S S
Sbjct: 121 NCLADESQCVWQKGKIVQNMILRLKNAECGEVAVQLEWINVPGAKGLPDGSTS 171

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BLAST of CmoCh04G000550 vs. TrEMBL
Match: A5BXZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05230 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-58
Identity = 110/167 (65.87%), Postives = 131/167 (78.44%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M N  GLLR+R+ RGINLA+RDA  RSSDPYV ++   QK K+RVVK NCNP+WNEE TL
Sbjct: 1   MENLLGLLRLRVRRGINLAVRDA--RSSDPYVAVTMGEQKLKTRVVKDNCNPEWNEELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           SI D + PI L V+D D FT DD MGDAEIDIKPY+ECL MGLE+LP G V+ RVQPSR+
Sbjct: 61  SIADTDVPINLVVYDSDTFTLDDKMGDAEIDIKPYVECLKMGLENLPTGTVISRVQPSRT 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LADES CVW++GKI QDM LRL+NVECGE+ +QI+  N  G +G+
Sbjct: 121 NCLADESCCVWDNGKIRQDMLLRLRNVECGEVEVQIEWINIPGCRGL 165

[Close]

BLAST of CmoCh04G000550 vs. TrEMBL
Match: M5Y337_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012480mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.7e-57
Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M+N  GLLR+R+ RGINLA+RD  T++SDPYVV++  +QK K++V+KKNCNPQWNEE TL
Sbjct: 1   MNNILGLLRLRIKRGINLAVRD--TKTSDPYVVVTMGSQKLKTKVIKKNCNPQWNEELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           SIT++   I L V+DKD  T DD MGDA+IDIKPY+ECL MGL+ LPKGC VK+VQP+R+
Sbjct: 61  SITNLEENIHLEVYDKDTLTVDDKMGDADIDIKPYVECLKMGLDVLPKGCAVKKVQPNRT 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N L+ ES CVW +GKI+QDM L+L NVECGEI +QI+  +  G KG+
Sbjct: 121 NCLSSESCCVWENGKIVQDMILKLNNVECGEIVLQIEWIHLPGSKGL 165

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BLAST of CmoCh04G000550 vs. TrEMBL
Match: U5G2E5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13070g PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-56
Identity = 110/169 (65.09%), Postives = 133/169 (78.70%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+ RG+NLA+RD    SSDPYVVI+  NQK K+RVVKKNCNP WNEE TL
Sbjct: 1   MDSFLGLLRIRVKRGVNLAVRDLG--SSDPYVVITMGNQKLKTRVVKKNCNPVWNEELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           SITD+N PI L VFDKD FT DD MG+A ID++PYI  L MGL++LPKGCVV RVQPS++
Sbjct: 61  SITDLNVPINLTVFDKDTFTVDDKMGEAGIDLQPYIASLKMGLQNLPKGCVVSRVQPSQN 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRT 170
           N LADES  VW+DGK+ QDM LRL+NVE GE+ IQI+  +  G +G++T
Sbjct: 121 NCLADESCIVWDDGKLHQDMILRLRNVESGEVTIQIEWIDVPGCRGLKT 167

[Close]

BLAST of CmoCh04G000550 vs. TAIR10
Match: AT2G01540.1 (AT2G01540.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 210.3 bits (534), Expect = 9.5e-55
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 1


Query: 6   GLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSITDI 65
           GLL I + RGINLAIRD   RSSDPY+V++ A+Q  K+RVVKKNCNP WNEE T++I D 
Sbjct: 7   GLLTIHVKRGINLAIRDH--RSSDPYIVLNVADQTLKTRVVKKNCNPVWNEEMTVAIKDP 66

Query: 66  NTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLE--SLPKGCVVKRVQPSRSNNL 125
           N PI+L VFD D+FT DD MGDA IDI+PY+E L MG+E   LP GC +KRVQPSR N L
Sbjct: 67  NVPIRLTVFDWDKFTGDDKMGDANIDIQPYLEALKMGMELLRLPNGCAIKRVQPSRHNCL 126

Query: 126 ADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYS 172
           +DES  VWN+GKI QD+ LRL NVECGEI I ++    +G +G+ + S
Sbjct: 127 SDESSIVWNNGKITQDLILRLNNVECGEIEIMLEWHEGAGCRGITSSS 172

[Close]

BLAST of CmoCh04G000550 vs. TAIR10
Match: AT1G70790.2 (AT1G70790.2 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 204.5 bits (519), Expect = 5.2e-53
Identity = 95/164 (57.93%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 6   GLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSITDI 65
           G+LR+ + RGINLAIRDA T  SDPYVVI+ ANQK K+RV+  NCNP WNE+ TLSI D+
Sbjct: 7   GILRVHVKRGINLAIRDATT--SDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDV 66

Query: 66  NTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGL--ESLPKGCVVKRVQPSRSNNL 125
           N PI+L VFDKDRF+ DD MGDAEID +P++E   M L  + LP GC +KR++P R+N L
Sbjct: 67  NDPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCL 126

Query: 126 ADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           A+ES   W++GKI+Q+M LRL+NVECGE+ + ++  +  G KG+
Sbjct: 127 AEESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGPGCKGL 168

[Close]

BLAST of CmoCh04G000550 vs. TAIR10
Match: AT3G17980.1 (AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-50
Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+ RG+NLA+RD    SSDPYVV+    QK K+RV+ K+ NP+WNE+ TL
Sbjct: 13  MDDLLGLLRIRIKRGVNLAVRDIS--SSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTL 72

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           S+TD N  + L V+D D F+KDD MGDAE +IKPYIE L M L+ LP G +V  V+PSR 
Sbjct: 73  SVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRR 132

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LA+ES   W DGK++QD+ LRL++VECGE+  Q+Q  +  G KG+
Sbjct: 133 NCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177

[Close]

BLAST of CmoCh04G000550 vs. TAIR10
Match: AT1G48590.2 (AT1G48590.2 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-49
Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+ RG+NLA+RD    SSDPYVV+  A QK K+RV+ KN NP+WNE+ TL
Sbjct: 37  MDSLLGLLRIRIKRGVNLAVRDL--NSSDPYVVVKMAKQKLKTRVIYKNVNPEWNEDLTL 96

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           S++D N  + L V+D D FTKDD MGDAE  IKP++  L M L  LP G +V  VQPSR 
Sbjct: 97  SVSDPNLTVLLTVYDYDTFTKDDKMGDAEFGIKPFVNALKMHLHDLPSGTIVTTVQPSRD 156

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LA+ES  +W+DGK++QD+ LRL++VECGE+  Q+Q  +  G KG+
Sbjct: 157 NCLAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQWIDLPG-KGL 200

[Close]

BLAST of CmoCh04G000550 vs. TAIR10
Match: AT1G70810.1 (AT1G70810.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 188.0 bits (476), Expect = 5.0e-48
Identity = 92/167 (55.09%), Postives = 121/167 (72.46%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M    GLLRIR+ RGINLA RD  T SSDP+VVI+  +QK K+RVV+ NCNP+WNEE TL
Sbjct: 1   MEELVGLLRIRVKRGINLAQRD--TLSSDPFVVITMGSQKLKTRVVENNCNPEWNEELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           ++   + P+ L V+DKD FT  D MGDA+IDIKP++E   MGL+ LP G  +KRV P+R 
Sbjct: 61  ALRHPDEPVNLIVYDKDTFTSHDKMGDAKIDIKPFLEVHKMGLQELPDGTEIKRVVPNRE 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LA+ S  V N+GKI+Q+M L L+NVECGE+ IQ++  +  G +G+
Sbjct: 121 NCLAEASSIVSNNGKIVQNMILLLRNVECGEVEIQLEWIDIPGSRGL 165

[Close]

BLAST of CmoCh04G000550 vs. NCBI nr
Match: gi|449449040|ref|XP_004142273.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 1.8e-84
Identity = 151/171 (88.30%), Postives = 164/171 (95.91%), Query Frame = 1


Query: 3   NRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSI 62
           NR+GLLRIRLLRG NLAIRDAPTRSSDPYVVI++ANQKFKSRVVKKNCNP+WNEEFTLS+
Sbjct: 5   NRSGLLRIRLLRGHNLAIRDAPTRSSDPYVVITSANQKFKSRVVKKNCNPEWNEEFTLSV 64

Query: 63  TDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRSNN 122
           TD+NTPIKLAVFDKDRFTKDDGMGDAEIDIKPY+ECLNMGLE+LP GCVVKRVQPSRSN+
Sbjct: 65  TDVNTPIKLAVFDKDRFTKDDGMGDAEIDIKPYMECLNMGLENLPNGCVVKRVQPSRSNS 124

Query: 123 LADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS 174
           LADESPCVWNDGKI+QDMTLRLQNVECGEI IQ+QLFN S  +G RTYSL+
Sbjct: 125 LADESPCVWNDGKIVQDMTLRLQNVECGEIMIQLQLFNVSIFRGRRTYSLA 175

[Close]

BLAST of CmoCh04G000550 vs. NCBI nr
Match: gi|659129460|ref|XP_008464698.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis melo])

HSP 1 Score: 316.6 bits (810), Expect = 2.7e-83
Identity = 151/171 (88.30%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 3   NRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSI 62
           NR GLLRIRLLRG NLAIRDAPTRSSDPYVVI+ ANQKFKSRVVK+NCNP+WNEEFT S+
Sbjct: 5   NRNGLLRIRLLRGHNLAIRDAPTRSSDPYVVITCANQKFKSRVVKRNCNPEWNEEFTFSL 64

Query: 63  TDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRSNN 122
           TDINTPIKLAVFD+DRFTKDDGMGDAEIDIKPYIECLNMGLE+LP GCVVKRVQPSRSN+
Sbjct: 65  TDINTPIKLAVFDRDRFTKDDGMGDAEIDIKPYIECLNMGLENLPNGCVVKRVQPSRSNS 124

Query: 123 LADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS 174
           LADESPCVWNDGKI QDMTLRLQNVECGEI IQ+QLFN S  KG RTYSL+
Sbjct: 125 LADESPCVWNDGKITQDMTLRLQNVECGEIMIQVQLFNVSIFKGRRTYSLA 175

[Close]

BLAST of CmoCh04G000550 vs. NCBI nr
Match: gi|1009154994|ref|XP_015895476.1| (PREDICTED: protein C2-DOMAIN ABA-RELATED 7-like [Ziziphus jujuba])

HSP 1 Score: 245.0 bits (624), Expect = 9.8e-62
Identity = 114/167 (68.26%), Postives = 139/167 (83.23%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M N  GLLRIR+ RGINLA+RD  TRSSDPYVVI+  NQ+ KSRV+KKNCNP+WN+E TL
Sbjct: 1   MENTLGLLRIRVQRGINLAVRD--TRSSDPYVVITMGNQRLKSRVIKKNCNPEWNDELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           SI+D++TPI L V+DKD  T DD MG+AEIDIKP IECL MGLE LP GCVVKRVQP+R+
Sbjct: 61  SISDLDTPITLTVYDKDTLTVDDKMGEAEIDIKPLIECLRMGLEKLPNGCVVKRVQPNRT 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LADES CVWN+GKI+Q+M+LRL+NVECGE+ +Q++  +  G KG+
Sbjct: 121 NCLADESSCVWNNGKIVQNMSLRLKNVECGEVVLQLEWIDLPGCKGL 165

[Close]

BLAST of CmoCh04G000550 vs. NCBI nr
Match: gi|659072854|ref|XP_008467129.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 3.5e-59
Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M +  GLLRIR+LRG+NLAIRD  TRSSDPYVV++  NQK K+RVVK NCNP+WN+E TL
Sbjct: 1   MEHFLGLLRIRVLRGVNLAIRD--TRSSDPYVVVTMGNQKLKTRVVKNNCNPEWNDELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           S+ D+ TPI ++V+DKD  T  D MGDAEIDI+PYIECL MGL+SLP GCVV+R+ PS +
Sbjct: 61  SVADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLKMGLQSLPDGCVVRRLYPSGT 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS 174
           N LADES CVW++GKI+Q+M LRL+NVECGE+AIQ++  +  G KG+   S S
Sbjct: 121 NYLADESQCVWHNGKIVQNMILRLKNVECGEVAIQLEWIDVPGAKGLPVGSTS 171

[Close]

BLAST of CmoCh04G000550 vs. NCBI nr
Match: gi|225424287|ref|XP_002284632.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Vitis vinifera])

HSP 1 Score: 232.6 bits (592), Expect = 5.0e-58
Identity = 110/167 (65.87%), Postives = 131/167 (78.44%), Query Frame = 1


Query: 1   MSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTL 60
           M N  GLLR+R+ RGINLA+RDA  RSSDPYV ++   QK K+RVVK NCNP+WNEE TL
Sbjct: 1   MENLLGLLRLRVRRGINLAVRDA--RSSDPYVAVTMGEQKLKTRVVKDNCNPEWNEELTL 60

Query: 61  SITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRS 120
           SI D + PI L V+D D FT DD MGDAEIDIKPY+ECL MGLE+LP G V+ RVQPSR+
Sbjct: 61  SIADTDVPINLVVYDSDTFTLDDKMGDAEIDIKPYVECLKMGLENLPTGTVISRVQPSRT 120

Query: 121 NNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGM 168
           N LADES CVW++GKI QDM LRL+NVECGE+ +QI+  N  G +G+
Sbjct: 121 NCLADESCCVWDNGKIRQDMLLRLRNVECGEVEVQIEWINIPGCRGL 165

The following BLAST results are available for this feature:

BLAST of CmoCh04G000550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CAR10_ARATH	1.7e-53	61.31	Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana GN=CAR10 PE=2 SV=1	[more]
CAR9_ARATH	9.2e-52	57.93	Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana GN=CAR9 PE=2 SV=1	[more]
CAR4_ARATH	3.3e-49	55.09	Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1	[more]
CAR5_ARATH	3.6e-48	55.09	Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana GN=CAR5 PE=2 SV=1	[more]
CAR7_ARATH	8.9e-47	55.09	Protein C2-DOMAIN ABA-RELATED 7 OS=Arabidopsis thaliana GN=CAR7 PE=1 SV=1	[more]

BLAST of CmoCh04G000550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJA0_CUCSA	1.3e-84	88.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G030450 PE=4 SV=1	[more]
A0A0A0KRJ0_CUCSA	3.5e-58	63.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569360 PE=4 SV=1	[more]
A5BXZ0_VITVI	3.5e-58	65.87	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05230 PE=4 SV=...	[more]
M5Y337_PRUPE	8.7e-57	62.87	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012480mg PE=4 SV=1	[more]
U5G2E5_POPTR	2.5e-56	65.09	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13070g PE=4 SV=1	[more]

BLAST of CmoCh04G000550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01540.1	9.5e-55	61.31	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G70790.2	5.2e-53	57.93	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G17980.1	1.8e-50	55.09	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G48590.2	2.0e-49	55.09	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G70810.1	5.0e-48	55.09	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

BLAST of CmoCh04G000550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449040\|ref\|XP_004142273.1\|	1.8e-84	88.30	PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cuc...	[more]
gi\|659129460\|ref\|XP_008464698.1\|	2.7e-83	88.30	PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cuc...	[more]
gi\|1009154994\|ref\|XP_015895476.1\|	9.8e-62	68.26	PREDICTED: protein C2-DOMAIN ABA-RELATED 7-like [Ziziphus jujuba]	[more]
gi\|659072854\|ref\|XP_008467129.1\|	3.5e-59	64.16	PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cuc...	[more]
gi\|225424287\|ref\|XP_002284632.1\|	5.0e-58	65.87	PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Vit...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006566	threonine metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004609	phosphatidylserine decarboxylase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G000550.1	CmoCh04G000550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	PRINTS	PR00360	C2DOMAIN	coord: 48..61 score: 4.8E-5coord: 24..36 score: 4.8E-5coord: 69..77 score: 4.
IPR000008	C2 domain	GENE3D	G3DSA:2.60.40.150		coord: 137..156 score: 2.2E-27coord: 3..105 score: 2.2
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 6..94 score: 5.9
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 7..104 score: 3.1
IPR000008	C2 domain	PROFILE	PS50004	C2	coord: 8..89 score: 14
IPR000008	C2 domain	unknown	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 2..102 score: 2.08
None	No IPR available	PANTHER	PTHR23180	CENTAURIN/ARF	coord: 1..155 score: 1.0
None	No IPR available	PANTHER	PTHR23180:SF268	CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN	coord: 1..155 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G000550	CmaCh04G000620	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G000550	CmaCh04G021220	Cucurbita maxima (Rimu)	cmacmoB746
CmoCh04G000550	Cla011718	Watermelon (97103) v1	cmowmB691
CmoCh04G000550	Cla003931	Watermelon (97103) v1	cmowmB708
CmoCh04G000550	MELO3C005299	Melon (DHL92) v3.5.1	cmomeB629
CmoCh04G000550	MELO3C026419	Melon (DHL92) v3.5.1	cmomeB636
CmoCh04G000550	ClCG01G006300	Watermelon (Charleston Gray)	cmowcgB638
CmoCh04G000550	ClCG07G006030	Watermelon (Charleston Gray)	cmowcgB676
CmoCh04G000550	Lsi04G011260	Bottle gourd (USVL1VR-Ls)	cmolsiB673
CmoCh04G000550	Cp4.1LG01g06090	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G000550	MELO3C026419.2	Melon (DHL92) v3.6.1	cmomedB724
CmoCh04G000550	Cla97C01G006610	Watermelon (97103) v2	cmowmbB679
CmoCh04G000550	Cla97C07G134120	Watermelon (97103) v2	cmowmbB755
CmoCh04G000550	Bhi12G000789	Wax gourd	cmowgoB0826
CmoCh04G000550	Bhi07G000300	Wax gourd	cmowgoB0889
CmoCh04G000550	Carg22007	Silver-seed gourd	carcmoB0250

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G000550	CmoCh04G022210	Cucurbita moschata (Rifu)	cmocmoB471

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G000550	Cucurbita moschata (Rifu)	cmocmoB464
CmoCh04G000550	Cucurbita maxima (Rimu)	cmacmoB731
CmoCh04G000550	Cucurbita pepo (Zucchini)	cmocpeB674
CmoCh04G000550	Silver-seed gourd	carcmoB0924