CmaCh04G000620 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTACTTTTTATTTTTATTTTCTTTTTCTTAAAAAAAAAATCAAGGAAAGGAAGAGGAAATGGTCAAGCTTCTTCTATATGAAGATTATTTACAATTTTATAAATATTACAAATCTCTTCCTCTGATCCGTTGTATATATTTCGATTCTCTTCTCAAAATCTTCGACCACAAGGGGAAGTGCTCAAGAACATGCGAAGATTTTGAAATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTGTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGGTTCCTTCTTCCACTTCCGATTCATATTCACCGATCTCTCTTCCACGCATCCCGTTATAGGATATTTGTTTGTTCAAGTGTTGAACGGTCCAGATTTGGATTTGGATTCTTATTTTTTGGAACTTTCTGAGGAATGTTCGTCAAAATTTTCCGGTTTTTTCTTATTTTCCCGTTCGAATTTCCTTTCAAAACTTCGCGAGCCGTTCGAATTCGGATTGCGACTTTCAGATTTTAAGTTTCTGTTCGGATTTGCTGTTTCGGCTTCTGATTATAATTTTTTTCTTTTGACTTTCCTTCGAAATCTTCGTCAAATTTGTCCACTTTTAGGTTTTCGCTGTTTAGATTTTCCCTTTCTTAACTGTGCAAGCGGCTTCAATTCTGATTGCGAATATTTGTCGATTTTTTCAGTATTTAGGTTTTTTGTTCGGATTTTCCCTCTCAATCTGTCCAAACAGATCAAATTCTGATGGCGCTTTCTTCGTTGCAAAATATTCGTCCAACTCTTCCGCGTTAAATTTTTTTTGCTCGATTTTTTCCTTTCGAAACTATGCAACCGATTCTGATTGCAGATTGCGATTTCTCCGTAACTTCCATTGGAAGCTCTCGGAGTATTCATGAAGTTTATTCGTTTTTTCTTTTTCATTGTATCTTATGGCATGACTCTTTTGATACTAATTTTTTGTACAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACTCTCTCAATTACGGACATCAACACACCAATCAAATTAGTAAGTCAAATCACGCGCTTTTAAACCGAGAAATTCAGACAATCTTACAAACTTGTGATCAAACATTAAACAAATCACTGACATTTGTTTCCATCACTGGATTCTCAGGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCTAAGGGTTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATCCAAGACATGACTCTCAGATTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGAAAAACATCGCCTCCTCCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGAAAAACATCGCCTCCTCC CGTACTTTTTATTTTTATTTTCTTTTTCTTAAAAAAAAAATCAAGGAAAGGAAGAGGAAATGGTCAAGCTTCTTCTATATGAAGATTATTTACAATTTTATAAATATTACAAATCTCTTCCTCTGATCCGTTGTATATATTTCGATTCTCTTCTCAAAATCTTCGACCACAAGGGGAAGTGCTCAAGAACATGCGAAGATTTTGAAATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTGTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACTCTCTCAATTACGGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCTAAGGGTTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATCCAAGACATGACTCTCAGATTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGAAAAACATCGCCTCCTCCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGAAAAACATCGCCTCCTCC ATGGTCAAGCTTCTTCTATATGAAGATTATTTACAATTTTATAAATATTACAAATCTCTTCCTCTGATCCGTTGTATATATTTCGATTCTCTTCTCAAAATCTTCGACCACAAGGGGAAGTGCTCAAGAACATGCGAAGATTTTGAAATGAGTAATCGGACAGGACTTCTTCGAATTCGCCTGTTGCGAGGCATCAATCTCGCCATTCGTGATGCTCCCACCCGCAGCAGCGATCCCTACGTCGTCATCTCCACCGCTAACCAGAAATTCAAATCTCGAGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACTCTCTCAATTACGGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATCGGTTCACGAAAGACGACGGAATGGGGGATGCAGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAGTCTGCCTAAGGGTTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAACCTTGCAGATGAGAGCCCTTGCGTTTGGAACGATGGTAAGATCATCCAAGACATGACTCTCAGATTACAGAATGTTGAATGTGGTGAAATCGCGATTCAGATTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATGAGAACCTACTCTTTATCCTGA MVKLLLYEDYLQFYKYYKSLPLIRCIYFDSLLKIFDHKGKCSRTCEDFEMSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSITDINTPIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLESLPKGCVVKRVQPSRSNNLADESPCVWNDGKIIQDMTLRLQNVECGEIAIQIQLFNASGIKGMRTYSLS
BLAST of CmaCh04G000620 vs. Swiss-Prot
Match: CAR10_ARATH (Protein C2-DOMAIN ABA-RELATED 10 OS=Arabidopsis thaliana GN=CAR10 PE=2 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53 Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 1
BLAST of CmaCh04G000620 vs. Swiss-Prot
Match: CAR9_ARATH (Protein C2-DOMAIN ABA-RELATED 9 OS=Arabidopsis thaliana GN=CAR9 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 6.9e-52 Identity = 95/164 (57.93%), Postives = 125/164 (76.22%), Query Frame = 1
BLAST of CmaCh04G000620 vs. Swiss-Prot
Match: CAR4_ARATH (Protein C2-DOMAIN ABA-RELATED 4 OS=Arabidopsis thaliana GN=CAR4 PE=1 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.5e-49 Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1
BLAST of CmaCh04G000620 vs. Swiss-Prot
Match: CAR5_ARATH (Protein C2-DOMAIN ABA-RELATED 5 OS=Arabidopsis thaliana GN=CAR5 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.7e-48 Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1
BLAST of CmaCh04G000620 vs. Swiss-Prot
Match: CAR7_ARATH (Protein C2-DOMAIN ABA-RELATED 7 OS=Arabidopsis thaliana GN=CAR7 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.7e-47 Identity = 92/167 (55.09%), Postives = 121/167 (72.46%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TrEMBL
Match: A0A0A0KJA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G030450 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 9.6e-85 Identity = 151/171 (88.30%), Postives = 164/171 (95.91%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TrEMBL
Match: A0A0A0KRJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569360 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.0e-58 Identity = 109/173 (63.01%), Postives = 136/173 (78.61%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TrEMBL
Match: A5BXZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05230 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.6e-58 Identity = 110/167 (65.87%), Postives = 131/167 (78.44%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TrEMBL
Match: M5Y337_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012480mg PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 6.5e-57 Identity = 105/167 (62.87%), Postives = 134/167 (80.24%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TrEMBL
Match: B9HJD0_POPTR (C2 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0008s13070g PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.9e-56 Identity = 110/169 (65.09%), Postives = 133/169 (78.70%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TAIR10
Match: AT2G01540.1 (AT2G01540.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 211.1 bits (536), Expect = 7.1e-55 Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TAIR10
Match: AT1G70790.2 (AT1G70790.2 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 205.3 bits (521), Expect = 3.9e-53 Identity = 95/164 (57.93%), Postives = 125/164 (76.22%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TAIR10
Match: AT3G17980.1 (AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50 Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TAIR10
Match: AT1G48590.2 (AT1G48590.2 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49 Identity = 92/167 (55.09%), Postives = 120/167 (71.86%), Query Frame = 1
BLAST of CmaCh04G000620 vs. TAIR10
Match: AT1G70810.1 (AT1G70810.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 188.7 bits (478), Expect = 3.8e-48 Identity = 92/167 (55.09%), Postives = 121/167 (72.46%), Query Frame = 1
BLAST of CmaCh04G000620 vs. NCBI nr
Match: gi|449449040|ref|XP_004142273.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis sativus]) HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84 Identity = 151/171 (88.30%), Postives = 164/171 (95.91%), Query Frame = 1
BLAST of CmaCh04G000620 vs. NCBI nr
Match: gi|659129460|ref|XP_008464698.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 2.0e-83 Identity = 151/171 (88.30%), Postives = 160/171 (93.57%), Query Frame = 1
BLAST of CmaCh04G000620 vs. NCBI nr
Match: gi|1009154994|ref|XP_015895476.1| (PREDICTED: protein C2-DOMAIN ABA-RELATED 7-like [Ziziphus jujuba]) HSP 1 Score: 245.7 bits (626), Expect = 7.4e-62 Identity = 114/167 (68.26%), Postives = 139/167 (83.23%), Query Frame = 1
BLAST of CmaCh04G000620 vs. NCBI nr
Match: gi|659072854|ref|XP_008467129.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis melo]) HSP 1 Score: 237.7 bits (605), Expect = 2.0e-59 Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 1
BLAST of CmaCh04G000620 vs. NCBI nr
Match: gi|449465757|ref|XP_004150594.1| (PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Cucumis sativus]) HSP 1 Score: 233.8 bits (595), Expect = 2.9e-58 Identity = 109/173 (63.01%), Postives = 136/173 (78.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|