CmoCh03G013880 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCAGTTGTTATTGTTCCGACTAAGGAAGGCGAAGAAAGAAGCCGAAGCAACGAAGTTTCAGAATGAGCTCCTTCACGATTATCAGGAGCTACAGCGAGATCTCAAGATGAAAGGCAGAGATCTTAGAAAGTTTCAGAAAGGCAAGCATCGTCACTAAGATTCTGCTCGCGCATTTCTGTAATTACATTTTCATTCCCTCAAATTCCACTATTCCACGACTCTACGCATTTTCTTGTGCAAATTTTTGTTTGAAGATCTGGTGCATGGTTCGAAATTCTGATTTGGTGAATGATTTTCCAGGCCTTGCGAAGAATTACTAAGCAAGAGCGAAGTGTGATACAGAGCTATGTGAAAACGAGTCTGCTCTCAAGGTCATAACATTTCTTCACTCAACTTACGCCTTATCTCTACTTCTTGTCTGGTTTATGAGAACTTAAAAGTGAATATGAATCTGTCTGAAGTTTTATGCATTTCTTCTCAAATCTTTTCGTGTTCGACTTTGCTTCACGTCTATGTGTTATTTGAGTCGTTTTTCCGAGTCTCTTAGGTACCACTGAATTGATAATAAAGAGCGACATCAATTAAATTCTATTTCGGAATACATTATCTTGCTTCTACTGTATTCTACTGATCAAGAAGGACGCTGTTGTCGTCGTCAAGTCCGAGATCGATTGTTATATGGCGTGTAAGCCTTTCATTTTTAATTCTTGCATTCTTTTGTGGCGTTATGCAGGAATTGGATTTGCTGAAAGAGGATGCAACTGTTTACAAATTAGTTGGCCATATTCTTGTGAAGCAAGATCTATCAGAGCCAAATGAAAATGTTCGGATGAGAATTGGTTATCTCGCTGATGAATAGTATGTTTCTGTCTCAATTACTTTCAGTATGTCGTGGATTTACGTTGCGCTAACATTCTTCAGCATCGAAGTTGCTTGGTTCCTTGCTATCTCTGATCTAATGTTAAGATTCATTTACCTAATCCGGTCAACAGCAACTTTGTGTCGATCTGGAGGATTTTATCCATTGTTTAGGACAAGCAATGAGTTACCAGTGCGCCGTTCAGGAAAAAATGGTCCATTATATTTGCAGCTAAACGATCCTTTAGGATTGTTCTGGCGAGAGGCCATCTGGATTTAGTTAAGAGGAGGGAGTTCAAATCACATAATTGAAAAAAAAAAAAAAAATCAAATAGGTGAAAGGAGAATTTCAATTCAAAACTGGTATCCTAGCTAATTGGTGACATTCTTATCTTGACTTTTGTTTGAGTAGTTGTCAAATGCATATATCCAAATGTTTATTTGAAATCTGAACGCCTTGCCCCGGGAGGTAGTGTAAGAGCTGTTACAACGGAAAAATATAACATCATCTAATTCGAGCAATGCAATGTTGATGAAGTTTATAGCATGTGATTAGCATTAATAATTACCATCACGAACTTCTGCACTGTCTTATTGATGAAGTTTATAGCATGTGATTAGCATTAATAATTACCATCACGAACTTCTGCACTGTCTTATTCTTATCAATCTAACAATTCTCTTAATGTTGGTATTCGTGCTTGCATTCCTCAATATTTGGTGTTCTTGAAATATTTTTCATTTCTACGTCTCAGTGGATTCATTCATCGTAGGCTGACATACCTGTGCGCAGTAGTTGTAGTTATGAGTGCGCGTTATCTCTGACCACAATAATCCCAAGTTTTCATTACAGGAAACGCGCTGGTGCAATTATCGAAGATTTGGAAGAGAAGCAAATGAGCAAAAGAGAGAAGGTTAGCATTTATTTATCATGCATTTAGATATAGGACATGCCTTCAGATCGAATACGACGATTTGCCCCGATTTTTATGAGTCGGTGATGAAATTTTCTGAACTCAAATTCTTGCATTACGAAGTTCAAGTATTGATGATCACTTTATTATTTCTTTTTTTTGGAAAGAGAGGAAGTTAGCATTGCTTTAACATGCATTTGGACATAATAGTAATTTACGATTATTGCTTTATCTTTTTGGTTGGTATATGACGATTTGCCCCGATTTTTATGGATCGTTGATGAAATTTTCTGAATTTAAATCCTTGCATTACGAGACGAGGGTCAAACATTGATGGTCACTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAGGAAATTAGTAATCTATGCTTATCATGCATGCGTATTATATTTATTCACGCCTTTTTCTACATAATATGGTATAGCATTTGAATCAGTCATAAAGTGGTTCTAATAATTTCTTGATCGGCTGCGATCTTCGGTATGTCTCCGTTTTCACTCTATTCCTATCTGGTTTCAGAATTCTTTGTTCCAAAATATGTGCCTATCTCTAGGACATCTTATTAGCCATATTCTTAGGTAGTTTTTGTTAGACGAACACAACCTTACACAATACACAATAGTATGATATTGTCTACTTTAAGCATAAGCTCTCATACGTTGCTTTGGGCTTCCTCAAAAGGTCTCATACCAATGGAGATAGTATTCCTTGATTATAAACCCATAATCATTCCCTAAATTGGTGATGTGGGACTTTCATCCACCAACACCTCTCCTCGAAGAAAGTACGCGATAAGCCTCGACTCCTTTTCTTTTAGAGTCCTTTGTTCGACATTTGAGGATTCTATTGGCATAGCTAAGTTTAGGGCATAGCTCTGATGTCATGTTAGACGAACACAACCCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGTTCTCATGGTTTTGCTTTGGGTTCCCAAAAGGTCTCCATAATGGTATGATATTGTCCACTTTGAACATAATCTCTCATGGTTTTACTTTGTGTTCCCAAAAGGTCTCATACAAATGGAGATAGTATTATTTGATTATAAATTATAAATTTATAATCATTCCCTAAATTAGCTGATATTTCATCCACCAAAGTAATAGTTTTAATAGAGAAAAGAATCGAAAATTTTGTTTTATTTAATACGTTATTCGTTTAATTTTTTATTTAATAAAAGAAAGAGAAAAAATGTTCGAGATTGTGAGTAGAATAGCTGAATCTCTCTCTCTTTTTATTATTATTATATTAACATTAGGTGGAATTTATATTTCAGGTTACAAAAGAATGCAGTCAATGATTACGTCATGCAAATCAATTACATTTGGTTAGTAATTTTTTAACTCAAATTAACTGGTGTTCAACATTCTAGATATCATGTGTTTCTCATCTTATAATCATCAGAGGATTCCATTCTATAAACCCTGGCG ACCAGTTGTTATTGTTCCGACTAAGGAAGGCGAAGAAAGAAGCCGAAGCAACGAAGTTTCAGAATGAGCTCCTTCACGATTATCAGGAGCTACAGCGAGATCTCAAGATGAAAGGCAGAGATCTTAGAAAGTTTCAGAAAGAGCTATGTGAAAACGAGTCTGCTCTCAAGGAATTGGATTTGCTGAAAGAGGATGCAACTGTTTACAAATTAGTTGGCCATATTCTTGTGAAGCAAGATCTATCAGAGCCAAATGAAAATGTTCGGATGAGAATTGGTTATCTCGCTGATGAATAGAAACGCGCTGGTGCAATTATCGAAGATTTGGAAGAGAAGCAAATGAGCAAAAGAGAGAAGGTTACAAAAGAATGCAGTCAATGATTACGTCATGCAAATCAATTACATTTGGTTAGTAATTTTTTAACTCAAATTAACTGGTGTTCAACATTCTAGATATCATGTGTTTCTCATCTTATAATCATCAGAGGATTCCATTCTATAAACCCTGGCG ATGAAAGGCAGAGATCTTAGAAAGTTTCAGAAAGAGCTATGTGAAAACGAGTCTGCTCTCAAGGAATTGGATTTGCTGAAAGAGGATGCAACTGTTTACAAATTAGTTGGCCATATTCTTGTGAAGCAAGATCTATCAGAGCCAAATGAAAATGTTCGGATGAGAATTGGTTATCTCGCTGATGAATAG
BLAST of CmoCh03G013880 vs. Swiss-Prot
Match: PFD6_DROME (Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 8.0e-06 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 1
BLAST of CmoCh03G013880 vs. TrEMBL
Match: A0A067KPA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04610 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-10 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. TrEMBL
Match: A0A151T398_CAJCA (Prefoldin subunit 6 OS=Cajanus cajan GN=KK1_016009 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.8e-10 Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 1
BLAST of CmoCh03G013880 vs. TrEMBL
Match: A0A0S3QWJ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G014600 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.8e-10 Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 1
BLAST of CmoCh03G013880 vs. TrEMBL
Match: V7CT33_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G321900g PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.7e-10 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. TrEMBL
Match: A0A0D2VI02_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G043400 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.7e-10 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. TAIR10
Match: AT1G29990.1 (AT1G29990.1 prefoldin 6) HSP 1 Score: 70.1 bits (170), Expect = 5.5e-13 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. NCBI nr
Match: gi|643730535|gb|KDP37967.1| (hypothetical protein JCGZ_04610 [Jatropha curcas]) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-10 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. NCBI nr
Match: gi|802596172|ref|XP_012072099.1| (PREDICTED: prefoldin subunit 6 [Jatropha curcas]) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-10 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. NCBI nr
Match: gi|1000965338|ref|XP_015574949.1| (PREDICTED: prefoldin subunit 6 [Ricinus communis]) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-10 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CmoCh03G013880 vs. NCBI nr
Match: gi|951003166|ref|XP_014507527.1| (PREDICTED: prefoldin subunit 6 [Vigna radiata var. radiata]) HSP 1 Score: 72.0 bits (175), Expect = 4.1e-10 Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 1
BLAST of CmoCh03G013880 vs. NCBI nr
Match: gi|1012350326|gb|KYP61515.1| (Prefoldin subunit 6 [Cajanus cajan]) HSP 1 Score: 72.0 bits (175), Expect = 4.1e-10 Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |