CmoCh03G008780 (gene) Cucurbita moschata (Rifu)

NameCmoCh03G008780
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionIMPACT family member in pol 5'region
LocationCmo_Chr03 : 6839788 .. 6842519 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATATTTGTCCAACTGAGAATCGGAGGCTCCATCAAATGCCCGTAGCAATTGCCTCTGCCGCAGCGCCAAATTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGGTCACAACAGTCAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGACTGCCTTCTCTTTTCTCTCCCAGGTGTTCTATGCTAGATTCTCATGGAGGAGTTTCCGATTTCTATTCCTATTTAGCCTCGCTGCCTTTCTGTTTGTTTCCTGGAATAAATTCTCTTTTGTTCCCTTGGGATTCTATATGCCATTTTCTTTGAAGTTGTAAATTATATCGCACTTTACATTGTACATGATTCAATTGGCAAAGCTATCTATTTTGTAGTGAAATTCGTTATTGCAAATTGTATTATGACATTAGCGTCACTCTTTTAATCTCAAATATTGGAACATTGCCTCAAAATGCGTCCTTAAAAATCTTCTAGAATAGGATCGATATGTTTGTGTGAAATTCACTAATCTGGCAGGCATTTTTTGTGGTGAAACTCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTGCTTCTTTATCTCTTGCATGTTGTTGGATATGGTTAGATGTATTAGTTGTTACAGTTCTTGAAGAATATCTATTATGGGGTAGTTCACCATCCGTCACAGTGGTCTAATACTTTGCTCTTCACGTGGTCTGTTGAAGGTGTAATGTAACAGAGTTTATGCTAAATCACGTGATAAAATACTACATGAATAAATCTATCATCTCTTTTATATTTTTACAAAAATAACATTCCTTAAATATGATAAGAAAGATGCTACGGTTAGTTTCTGTTTTACATTTTTACACTGTTTATTTTGATAGACCTGAAAATTTTCTGCTGCGAATGTAATATCAATTAGTTTCTGACATTCCCTCGTATTTTAAAGCTCGCAAGTTTCTGATGGTCATATTATTACTTCAAAGTGCAATGCTCCAGTTTTTCAGAGAGTTTTTTTTTTTCAAGAGGATTCCCATAAAGAGATGTTGAGAGGGGAGTTAATATATTTACTTCCCTGATCTCAATTCCTTTATTTATAACTTCTCTTGACTCTATTCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCCATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTCGTGATCAGGTATTCTCTTTGCAAATAATAGGAATTAGGTTGAAACATAGTTTTTGGGATCTATTTCTAAGCAATTTTCATGGGCAAAATACTAGCCAATCGTTGACTTGGAATCCTCTTATTAATGCTTTTGGTTGATATGAATGTGTATGCTTGCCATGTGCTATAGCTAACTTCGTATGATATCTTTTCCCTCTACCAAATTTTAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTGTTTCTTCTTCCCTCAATAGTTGTCACCCTGTGATGCTAGTATTACTCAGAAGTTTATGGAGCAAATTAACTGTACTAAACTATTTTAAATTGATTTACACAGGAAATGTTATTTTTGATAAATTGGGTTCCATGTCTTTTAGGTTCCAATGGGCGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGGTAAATTTGCCCATGTGATCAAGAGTTATCTTGTATGCCTCTGTCACGGGTTTGAATTTTCGTCTCTAGTGCTTTTTCCCCTCAGATATTGGACGGTTATTGTTTGAACTATGGTCTCTGATTTTTCATTTGTTTCTGCTTGTTTTTTCTTCCTTCGGTATAGTTCTCATGTCATAGTCAATATTGCATTTACTTTGGACGGAAACATTTTTCTATAATTCTTACAATTACATATATACCATAGAGTGATGATCTTTCGGCTCCAGCAATAACAGAAAGGTTCTACTGTTCTGTCATGCACAGTATCCGTTTCTTCTGCCGCCTTTTTAAATGGATATTATTGTAGAGCTGAAATTTGTGTCGGTGTTTGCAGTTGCAATCTTTTCACGTTGAGGACATTAAGCAGGACTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCATGTTGAGAAGCTGGAGGATGCTATCAAATCTCATTGTAGCCGTGAATTAATCTTTTACAAGCAATAAATTATACAGCTGTTCTTTGTACATGAATGCAGAGAAGGGAGATACACATCAATATAAAGAAGAAATCAAGTATGCATCCAATCAATGGCGGGTGGCTTATGAGGGAATTGAATGATGACTTTGTACAACTATTTACATTGCACAATAATCTAGATATCCTTTGTAAAATACATTTCCCATTGAAATGAATATTTAGTTAGTTTACTGCCTGCTTCATCTCATGTTCCTTCATTAACCTATATGCAATACTACTGCTGTAGAAGCATCATATTTTTCAGAAGCACGCGCAGTCCTTATTTGATTGATGATAACAGCTTTCAAGGAACCTTTGCC

mRNA sequence

TTATATTTGTCCAACTGAGAATCGGAGGCTCCATCAAATGCCCGTAGCAATTGCCTCTGCCGCAGCGCCAAATTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGGTCACAACAGTCAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGACTGCCTTCTCTTTTCTCTCCCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCCATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTCGTGATCAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTTCCAATGGGCGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGTTGCAATCTTTTCACGTTGAGGACATTAAGCAGGACTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCATGTTGAGAAGCTGGAGGATGCTATCAAATCTCATTGTAGCCGTGAATTAATCTTTTACAAGCAATAAATTATACAGCTGTTCTTTGTACATGAATGCAGAGAAGGGAGATACACATCAATATAAAGAAGAAATCAAGTATGCATCCAATCAATGGCGGGTGGCTTATGAGGGAATTGAATGATGACTTTGTACAACTATTTACATTGCACAATAATCTAGATATCCTTTGTAAAATACATTTCCCATTGAAATGAATATTTAGTTAGTTTACTGCCTGCTTCATCTCATGTTCCTTCATTAACCTATATGCAATACTACTGCTGTAGAAGCATCATATTTTTCAGAAGCACGCGCAGTCCTTATTTGATTGATGATAACAGCTTTCAAGGAACCTTTGCC

Coding sequence (CDS)

ATGCCCGTAGCAATTGCCTCTGCCGCAGCGCCAAATTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGGTCACAACAGTCAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGACTGCCTTCTCTTTTCTCTCCCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCCATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTCGTGATCAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTTCCAATGGGCGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGTTGCAATCTTTTCACGTTGAGGACATTAAGCAGGACTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCATGTTGAGAAGCTGGAGGATGCTATCAAATCTCATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA
BLAST of CmoCh03G008780 vs. Swiss-Prot
Match: YPOL_THETH (IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 67/138 (48.55%), Postives = 99/138 (71.74%), Query Frame = 1

Query: 66  IKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPI 125
           I++S+F+A A P  +E+ A +FL+  REP+ATHN +AY++G  +R +DDGEP    G+PI
Sbjct: 2   IQRSRFLAKAAPAASEEEALAFLAAHREPQATHNAYAYRIGPLYRFSDDGEPRAP-GRPI 61

Query: 126 HSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV 185
             AI ++G+DRV+V+V+RYFGG+KLG GGLVRAYGGVA+E L+ A    +   V +   V
Sbjct: 62  LHAIEAAGLDRVVVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKAPLLDWVEVAFRV 121

Query: 186 PFNLLGALYHQLQSFHVE 204
           PF  +G ++  L++ H+E
Sbjct: 122 PFPEVGRVHGLLRARHLE 138

BLAST of CmoCh03G008780 vs. Swiss-Prot
Match: Y722_HAEIN (IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0722 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 1

Query: 53  YTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVRE--PRATHNCWAYQVGD--- 112
           Y   K  V FE+EIKKS+FI         + A +F +++++  P A H+CWA   G    
Sbjct: 4   YLVPKSAVVFEEEIKKSRFITYLQHTEGLEDARAFWAKIKQEHPNARHHCWAAVAGKPTD 63

Query: 113 --QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASE 172
             Q   +DDGEP+GTAGKP+ SA+  S +  +  VV+RY+GGI LGTGGLVRAYG    +
Sbjct: 64  SLQLGFSDDGEPAGTAGKPMLSALQGSQLGEISAVVVRYYGGILLGTGGLVRAYGNGVQQ 123

Query: 173 CLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDY 210
            LK  ++ +   +    ++  +  L  +    + + VE + Q +
Sbjct: 124 ALKLIESEIKVERTLFKLDCDYGQLRLVQQLCEKYQVEILSQGF 167

BLAST of CmoCh03G008780 vs. Swiss-Prot
Match: YVYE_BACSU (IMPACT family member YvyE OS=Bacillus subtilis (strain 168) GN=yvyE PE=3 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 4.1e-21
Identity = 61/152 (40.13%), Postives = 84/152 (55.26%), Query Frame = 1

Query: 52  AYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPR--ATHNCWAYQVGDQF 111
           +Y T+KE    E  I+KS+FI     V+ EQ A  F+ ++++    ATHNC AY +G+  
Sbjct: 4   SYFTVKEAGEHEIVIEKSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVIGEND 63

Query: 112 ---RSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASEC 171
              ++NDDGEPSGTAG P+   +    +     VV RYFGGIKLG GGL+RAYG   SE 
Sbjct: 64  HIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEG 123

Query: 172 LKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQ 199
           L        K    M     +  LG + ++L+
Sbjct: 124 LNHIGVVERKLMRIMHTSADYTWLGKIENELR 155

BLAST of CmoCh03G008780 vs. Swiss-Prot
Match: YIGZ_ECOLI (IMPACT family member YigZ OS=Escherichia coli (strain K12) GN=yigZ PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 6.0e-20
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 1

Query: 64  KEIKKSKFIAIAGPVTNEQTAFSFLSQVR--EPRATHNCWAYQVG-----DQFRSNDDGE 123
           +EIKKS+FI +       + A +F+  VR   P A H+C A+  G      Q   +DDGE
Sbjct: 15  EEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGE 74

Query: 124 PSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVK 183
           P+GTAGKP+ + ++ SG+  +  VV+RY+GGI LGTGGLV+AYGG  ++ L+   T   +
Sbjct: 75  PAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTT---Q 134

Query: 184 SKVPMGVEVPFNLLGALYHQL 198
            K P+        L   YHQL
Sbjct: 135 RKTPLTEYT----LQCEYHQL 148

BLAST of CmoCh03G008780 vs. TrEMBL
Match: A0A0A0KGN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499080 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 2.7e-120
Identity = 221/248 (89.11%), Postives = 235/248 (94.76%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDMV T SSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV++EQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 249
           REL+FYK+
Sbjct: 241 RELVFYKR 248

BLAST of CmoCh03G008780 vs. TrEMBL
Match: A0A061DJ51_THECC (Ribosomal protein S5 domain 2-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_000998 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 8.2e-101
Identity = 190/249 (76.31%), Postives = 215/249 (86.35%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSS--GNAGAYTTIKE 60
           MPVAI +   P + Y     LN R S+SL ++   K  MVTT SSSS   NAGAYTTIKE
Sbjct: 1   MPVAITT---PGYSYCH--KLNHRLSASLSSLCTAKNPMVTTASSSSTGSNAGAYTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V  EKEIKKSKFIAIAGP++NEQ+A SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTCEKEIKKSKFIAIAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSH 240
           VP+GVE+PF+LLG LYHQLQSF  EDIKQDYD GKDGITMV+FKVDFD VEKLE+ IK++
Sbjct: 181 VPIGVEIPFDLLGVLYHQLQSFQAEDIKQDYDTGKDGITMVSFKVDFDRVEKLEETIKAN 240

Query: 241 CSRELIFYK 248
           CSREL+FYK
Sbjct: 241 CSRELVFYK 244

BLAST of CmoCh03G008780 vs. TrEMBL
Match: A0A0B0MZ52_GOSAR (IMPACT family member in pol 5'region OS=Gossypium arboreum GN=F383_34538 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.4e-100
Identity = 189/249 (75.90%), Postives = 215/249 (86.35%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSS--SGNAGAYTTIKE 60
           MPVAI     P +RY     LN R S+S+ A++  KK MVTT SSS  + NAGA+TTIKE
Sbjct: 1   MPVAIT----PGYRYCH--KLNHRLSASISALSTAKKPMVTTASSSGTTSNAGAFTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V FEKEIKKSKFIA+AGP++NEQ+A SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTFEKEIKKSKFIAVAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG DR+MVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGFDRIMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSH 240
           VPMGVEVPF+LLG LYHQLQSF  EDIKQDYD GKDG TMV+FKV+FD  EKLE+AIK++
Sbjct: 181 VPMGVEVPFDLLGVLYHQLQSFEAEDIKQDYDTGKDGTTMVSFKVEFDRAEKLEEAIKAN 240

Query: 241 CSRELIFYK 248
           CSREL FYK
Sbjct: 241 CSRELEFYK 243

BLAST of CmoCh03G008780 vs. TrEMBL
Match: A0A0D2PDZ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G233200 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.1e-100
Identity = 188/249 (75.50%), Postives = 216/249 (86.75%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSS--GNAGAYTTIKE 60
           MPV I +   P +RY     +N   S+S+ A++  KK MVTT SSS    NAGA+TTIKE
Sbjct: 1   MPVVITT---PGYRYCH--KVNHCLSASISALSTVKKPMVTTASSSGTPSNAGAFTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V FEKEIKKSKFIAIAGP++NEQ+A SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTFEKEIKKSKFIAIAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG+DR+MVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGLDRIMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSH 240
           VPMGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDG TMV+FKV+FD  EKLE+AIK++
Sbjct: 181 VPMGVEVPFDLLGVLYHQLQSFEVEDIKQDYDTGKDGTTMVSFKVEFDQSEKLEEAIKAN 240

Query: 241 CSRELIFYK 248
           CSREL+FYK
Sbjct: 241 CSRELVFYK 244

BLAST of CmoCh03G008780 vs. TrEMBL
Match: M5W4Q5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010339mg PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.8e-98
Identity = 180/219 (82.19%), Postives = 199/219 (90.87%), Query Frame = 1

Query: 30  CAIARDKKDMVTTVSSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLS 89
           C  A   K MVTT +SSS N GAYTTIKE VRFEKEIKKSKFIAIAGP+ +EQ+A SFLS
Sbjct: 35  CIAAGANKAMVTTAASSSSNGGAYTTIKERVRFEKEIKKSKFIAIAGPIPDEQSAQSFLS 94

Query: 90  QVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIK 149
           QVR+ RATHNCWAY+VGDQ+RSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIR+FGGIK
Sbjct: 95  QVRDQRATHNCWAYKVGDQYRSNDDGEPSGTAGKPIHSAIESSGIDRVMVVVIRHFGGIK 154

Query: 150 LGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDY 209
           LGTGGLVRAYGGVASECL++A TC+VKSKV MGVEVPF+LLG LYHQLQSF VEDIKQDY
Sbjct: 155 LGTGGLVRAYGGVASECLRNAPTCLVKSKVRMGVEVPFDLLGVLYHQLQSFQVEDIKQDY 214

Query: 210 DCGKDGITMVTFKVDFDHVEKLEDAIKSHCSRELIFYKQ 249
           + GKDGIT+VTF+VDFD +EKLEDAIKSHCSR+L+FYK+
Sbjct: 215 ETGKDGITVVTFQVDFDRIEKLEDAIKSHCSRDLVFYKR 253

BLAST of CmoCh03G008780 vs. TAIR10
Match: AT4G38090.1 (AT4G38090.1 Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 311.2 bits (796), Expect = 5.6e-85
Identity = 151/204 (74.02%), Postives = 180/204 (88.24%), Query Frame = 1

Query: 45  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQ 104
           S + N+G++TT+KE V  EKEIKKSKFIAIAGP+++EQ+A  FLSQVR+PRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGDQF-RSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD   R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKV 224
           S+CLK+A +C+VKSKV MGVEV F+LLG LY+QLQS H EDIK+DYD GKDG  MV+FKV
Sbjct: 150 SDCLKTAPSCLVKSKVQMGVEVTFDLLGVLYNQLQSCHAEDIKEDYDTGKDGTAMVSFKV 209

Query: 225 DFDHVEKLEDAIKSHCSRELIFYK 248
           +FD V+KLEDAIKS+C R+L+FYK
Sbjct: 210 EFDLVDKLEDAIKSNCRRDLVFYK 233

BLAST of CmoCh03G008780 vs. NCBI nr
Match: gi|449451395|ref|XP_004143447.1| (PREDICTED: uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 3.9e-120
Identity = 221/248 (89.11%), Postives = 235/248 (94.76%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDMV T SSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV++EQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 249
           REL+FYK+
Sbjct: 241 RELVFYKR 248

BLAST of CmoCh03G008780 vs. NCBI nr
Match: gi|659079997|ref|XP_008440556.1| (PREDICTED: uncharacterized protein LOC103484936 isoform X1 [Cucumis melo])

HSP 1 Score: 438.0 bits (1125), Expect = 1.1e-119
Identity = 222/248 (89.52%), Postives = 234/248 (94.35%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA AAAP+FR+FK L LNTR SSSL AI R++K MV T SSSS NAGAYTTIKEIV
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSRNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 249
           REL+FYK+
Sbjct: 241 RELVFYKR 248

BLAST of CmoCh03G008780 vs. NCBI nr
Match: gi|778719042|ref|XP_011657955.1| (PREDICTED: uncharacterized protein LOC101204297 isoform X2 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107
Identity = 208/248 (83.87%), Postives = 221/248 (89.11%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDMV T SSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV++EQ+AFSFLSQV              GDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQV--------------GDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 234

Query: 241 RELIFYKQ 249
           REL+FYK+
Sbjct: 241 RELVFYKR 234

BLAST of CmoCh03G008780 vs. NCBI nr
Match: gi|659080001|ref|XP_008440557.1| (PREDICTED: uncharacterized protein LOC103484936 isoform X2 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 3.8e-107
Identity = 209/248 (84.27%), Postives = 220/248 (88.71%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA AAAP+FR+FK L LNTR SSSL AI R++K MV T SSSS NAGAYTTIKEIV
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSRNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQV              GDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQV--------------GDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 234

Query: 241 RELIFYKQ 249
           REL+FYK+
Sbjct: 241 RELVFYKR 234

BLAST of CmoCh03G008780 vs. NCBI nr
Match: gi|590706727|ref|XP_007047803.1| (Ribosomal protein S5 domain 2-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-100
Identity = 190/249 (76.31%), Postives = 215/249 (86.35%), Query Frame = 1

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSS--GNAGAYTTIKE 60
           MPVAI +   P + Y     LN R S+SL ++   K  MVTT SSSS   NAGAYTTIKE
Sbjct: 1   MPVAITT---PGYSYCH--KLNHRLSASLSSLCTAKNPMVTTASSSSTGSNAGAYTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V  EKEIKKSKFIAIAGP++NEQ+A SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTCEKEIKKSKFIAIAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSH 240
           VP+GVE+PF+LLG LYHQLQSF  EDIKQDYD GKDGITMV+FKVDFD VEKLE+ IK++
Sbjct: 181 VPIGVEIPFDLLGVLYHQLQSFQAEDIKQDYDTGKDGITMVSFKVDFDRVEKLEETIKAN 240

Query: 241 CSRELIFYK 248
           CSREL+FYK
Sbjct: 241 CSRELVFYK 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YPOL_THETH3.4e-3148.55IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus PE=3 SV=... [more]
Y722_HAEIN1.3e-2236.59IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM ... [more]
YVYE_BACSU4.1e-2140.13IMPACT family member YvyE OS=Bacillus subtilis (strain 168) GN=yvyE PE=3 SV=2[more]
YIGZ_ECOLI6.0e-2041.13IMPACT family member YigZ OS=Escherichia coli (strain K12) GN=yigZ PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KGN8_CUCSA2.7e-12089.11Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499080 PE=4 SV=1[more]
A0A061DJ51_THECC8.2e-10176.31Ribosomal protein S5 domain 2-like superfamily protein isoform 1 OS=Theobroma ca... [more]
A0A0B0MZ52_GOSAR1.4e-10075.90IMPACT family member in pol 5'region OS=Gossypium arboreum GN=F383_34538 PE=4 SV... [more]
A0A0D2PDZ2_GOSRA4.1e-10075.50Uncharacterized protein OS=Gossypium raimondii GN=B456_007G233200 PE=4 SV=1[more]
M5W4Q5_PRUPE3.8e-9882.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010339mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G38090.15.6e-8574.02 Ribosomal protein S5 domain 2-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449451395|ref|XP_004143447.1|3.9e-12089.11PREDICTED: uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus][more]
gi|659079997|ref|XP_008440556.1|1.1e-11989.52PREDICTED: uncharacterized protein LOC103484936 isoform X1 [Cucumis melo][more]
gi|778719042|ref|XP_011657955.1|1.3e-10783.87PREDICTED: uncharacterized protein LOC101204297 isoform X2 [Cucumis sativus][more]
gi|659080001|ref|XP_008440557.1|3.8e-10784.27PREDICTED: uncharacterized protein LOC103484936 isoform X2 [Cucumis melo][more]
gi|590706727|ref|XP_007047803.1|1.2e-10076.31Ribosomal protein S5 domain 2-like superfamily protein isoform 1 [Theobroma caca... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001498Impact_N
IPR020568Ribosomal_S5_D2-typ_fold
IPR023582Impact
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G008780.1CmoCh03G008780.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001498Impact, N-terminalGENE3DG3DSA:3.30.230.30coord: 53..173
score: 1.5
IPR001498Impact, N-terminalPFAMPF01205UPF0029coord: 67..167
score: 2.3
IPR020568Ribosomal protein S5 domain 2-type foldunknownSSF54211Ribosomal protein S5 domain 2-likecoord: 53..171
score: 6.07
IPR023582Impact familyPANTHERPTHR16301IMPACT-RELATEDcoord: 32..248
score: 1.1
NoneNo IPR availablePANTHERPTHR16301:SF0IMPACT FAMILY MEMBER YIGZcoord: 32..248
score: 1.1

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G008780Cucumber (Gy14) v2cgybcmoB227
CmoCh03G008780Cucumber (Gy14) v2cgybcmoB381
CmoCh03G008780Melon (DHL92) v3.6.1cmomedB673
CmoCh03G008780Melon (DHL92) v3.6.1cmomedB679
CmoCh03G008780Silver-seed gourdcarcmoB0086
CmoCh03G008780Silver-seed gourdcarcmoB1028
CmoCh03G008780Cucumber (Chinese Long) v3cmocucB0762
CmoCh03G008780Cucumber (Chinese Long) v3cmocucB0770
CmoCh03G008780Watermelon (97103) v2cmowmbB672
CmoCh03G008780Wax gourdcmowgoB0808
CmoCh03G008780Cucurbita moschata (Rifu)cmocmoB145
CmoCh03G008780Cucurbita moschata (Rifu)cmocmoB451
CmoCh03G008780Cucurbita moschata (Rifu)cmocmoB452
CmoCh03G008780Cucurbita moschata (Rifu)cmocmoB455
CmoCh03G008780Cucumber (Gy14) v1cgycmoB0459
CmoCh03G008780Cucurbita maxima (Rimu)cmacmoB187
CmoCh03G008780Cucurbita maxima (Rimu)cmacmoB727
CmoCh03G008780Cucurbita maxima (Rimu)cmacmoB784
CmoCh03G008780Cucurbita maxima (Rimu)cmacmoB858
CmoCh03G008780Wild cucumber (PI 183967)cmocpiB651
CmoCh03G008780Cucumber (Chinese Long) v2cmocuB639
CmoCh03G008780Melon (DHL92) v3.5.1cmomeB587
CmoCh03G008780Watermelon (Charleston Gray)cmowcgB600
CmoCh03G008780Watermelon (97103) v1cmowmB609
CmoCh03G008780Cucurbita pepo (Zucchini)cmocpeB639
CmoCh03G008780Cucurbita pepo (Zucchini)cmocpeB607
CmoCh03G008780Cucurbita pepo (Zucchini)cmocpeB613
CmoCh03G008780Cucurbita pepo (Zucchini)cmocpeB624
CmoCh03G008780Cucurbita pepo (Zucchini)cmocpeB640
CmoCh03G008780Bottle gourd (USVL1VR-Ls)cmolsiB602
CmoCh03G008780Bottle gourd (USVL1VR-Ls)cmolsiB607