CmaCh03G008370 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G008370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionIMPACT family member in pol 5'region
LocationCma_Chr03 : 6302163 .. 6304559 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGTCCAACTGAGAATCGGAGGCTCCATCAAATGCCCGTAGCAATTGCCTCTGCCGCAGCCCCAAACTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGTTCACAACAGTCAGTAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGTCTGCCTTCTCTTTTCTCTCCCAGGTGTTCTATGCTAGATTCTCATGGAGGAGTTTCCGATTTCTATTCCTGTTTACCCTCGCTGCCTTTCTGTTTGTTTCCTGGAATAAATTCTCTTTTGTTCCCTTGGGATTCTATATGCCATTTTCTTTGAAGTTGTAAATTATATCGCACTTCACATTGTACATGATTCAATTGGCAAAGCTATCTATTTTCTAGTGAAATTCGTTATTGCAAATTGTATTATGCCATTAGCATCACTCTTTTAATCTCAAATATTGGAACATTGCCTCAAAATGCGTCCTTGAAAATCTTCTAGAATAGAATCGATATGTTTGTGTGAAATTCACTAATCTGGCTGGCATTTTTTGTGATGAAACTCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTACTTCTTTATCTCTTGCATGTTGTTGGATATGGTTAGATGCATTAGTTGTTACAGTTCTTGAAGAATATCTATTATGGGGTAGTTCACCATCCGTCCCAGTGGTCTAACACTTTGCTCTTCACGTGGTCTGTTGAAGGTGTAATGTAACAGAGTTTATGCTAAATCACGTGATAAAATACTACATGAATAAATCTATCATCTCTTTTATATTTTTACAAAAATAACATTCCTTAAATATGATAAGAAAGATGCTACGTTTAGTTTCTGTTTTACATTTTTACACTGTTTATTTTGATAGATCCGAAATTTTTTTGCTGCGAATGTAATATCAATTAGTTTCTGTCATTCCCTCGTATTTTAAAGCTCGCAAGTTTCTGATGGTCATATTATTACTTCAAAATGCAATGCTCCAGTTTTTCAGAGAGTTTTTTTGTTCAAGAGGATTCCCATAAAGAGATATTGAGAGGGGAGTTAATAAATTTACTTCCCTGATCTCAATTCCTTTATTTATAACTTCCCTTGACTCTATTCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCTATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTTTTCTCTTTGCAAATAATAGGAATTAGGTTGAAACATAGTTTTTGGGATCTATTTCTAAGCAATTTTCATGGGCAAAATACTAGCCAATCGTTGACTTGGAATCCTCTTATTAATGCTTTTGGTTGATATGAATGTGTGTGCTTGCCATGTGCTATAGCTAACTTCGTATGATATCTTTTCCCTCTACCAAATTTTAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTGTTTCTTCTTCCCTCAATAGTTGTCACCCTGTGATGCTAGTATTACTCAGAAGTTTATGGAGCAAATTAACTGTACTAAACTATTTTAAATTGATTTACACAGGAAATGTTATTTTTGATAAATTGGGTTCCATGTCTTTTAGGTTCCAATGGGTGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGGTAAATTTGCCCATGTGATTAAGAGTTATCTTGTATGCCTCTGTCACGGGTTTGAATTTTCGTCTTTAGTGCTTTTTCCCCTCAGATATTGGACGGTTATTGTTTGAACTATGGTCTCTGATTTTTCATTTGTTTCTGCTTGTTTTTTCTTCCTTCGGTATAGTTCTCATGTCATAGTCAATATTGCATTTACTTTGGACGGAAACATTCTTCTATAATTCTTACAATTACATATATACCATAGAGTGATGATCTTTCGGCTCCAGCAATAATAGAAAGGTTCTACAGTTCTGTCATGCACAGTATCCGTTTCTTCTGCCGCCTTTTTAAATGGATATTATTGTAGAGCTGAAATTTGTGTCGGTGTTTGCAGATGCAATCTTTTCACGTTGAGGACATTAAGCAGGATTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCGTGTTGAGAAGCTGGAGGATGCTATCAAATCTAATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA

mRNA sequence

ATTTGTCCAACTGAGAATCGGAGGCTCCATCAAATGCCCGTAGCAATTGCCTCTGCCGCAGCCCCAAACTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGTTCACAACAGTCAGTAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGTCTGCCTTCTCTTTTCTCTCCCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCTATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTTCCAATGGGTGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGATGCAATCTTTTCACGTTGAGGACATTAAGCAGGATTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCGTGTTGAGAAGCTGGAGGATGCTATCAAATCTAATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA

Coding sequence (CDS)

ATGCCCGTAGCAATTGCCTCTGCCGCAGCCCCAAACTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGTTCACAACAGTCAGTAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGTCTGCCTTCTCTTTTCTCTCCCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCTATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTTCCAATGGGTGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGATGCAATCTTTTCACGTTGAGGACATTAAGCAGGATTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCGTGTTGAGAAGCTGGAGGATGCTATCAAATCTAATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA

Protein sequence

MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNCSRELIFYKQ
Homology
[Close]
BLAST of CmaCh03G008370 vs. Swiss-Prot
Match: YPOL_THETH (IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.4e-31
Identity = 66/138 (47.83%), Postives = 99/138 (71.74%), Query Frame = 1 

Query: 67  IKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPI 126
           I++S+F+A A P  +E+ A +FL+  REP+ATHN +AY++G  +R +DDGEP    G+PI
Sbjct: 2   IQRSRFLAKAAPAASEEEALAFLAAHREPQATHNAYAYRIGPLYRFSDDGEPR-APGRPI 61

Query: 127 HSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV 186
             AI ++G+DRV+V+V+RYFGG+KLG GGLVRAYGGVA+E L+ A    +   V +   V
Sbjct: 62  LHAIEAAGLDRVVVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKAPLLDWVEVAFRV 121

Query: 187 PFNLLGALYHQMQSFHVE 205
           PF  +G ++  +++ H+E
Sbjct: 122 PFPEVGRVHGLLRARHLE 138

[Close]
BLAST of CmaCh03G008370 vs. Swiss-Prot
Match: Y722_HAEIN (IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0722 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 1 

Query: 54  YTTIKEIVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVRE--PRATHNCWAYQVGD--- 113
           Y   K  V FE+EIKKS+FI         + A +F +++++  P A H+CWA   G    
Sbjct: 4   YLVPKSAVVFEEEIKKSRFITYLQHTEGLEDARAFWAKIKQEHPNARHHCWAAVAGKPTD 63

Query: 114 --QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASE 173
             Q   +DDGEP+GTAGKP+ SA+  S +  +  VV+RY+GGI LGTGGLVRAYG    +
Sbjct: 64  SLQLGFSDDGEPAGTAGKPMLSALQGSQLGEISAVVVRYYGGILLGTGGLVRAYGNGVQQ 123

Query: 174 CLKSAQTCVVKSKVPMGVEVPFNLLGALYHQMQSFHVEDIKQDY 211
            LK  ++ +   +    ++  +  L  +    + + VE + Q +
Sbjct: 124 ALKLIESEIKVERTLFKLDCDYGQLRLVQQLCEKYQVEILSQGF 167

[Close]
BLAST of CmaCh03G008370 vs. Swiss-Prot
Match: YVYE_BACSU (IMPACT family member YvyE OS=Bacillus subtilis (strain 168) GN=yvyE PE=3 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-21
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1 

Query: 53  AYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPR--ATHNCWAYQVGDQF 112
           +Y T+KE    E  I+KS+FI     V+ EQ A  F+ ++++    ATHNC AY +G+  
Sbjct: 4   SYFTVKEAGEHEIVIEKSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVIGEND 63

Query: 113 ---RSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASEC 172
              ++NDDGEPSGTAG P+   +    +     VV RYFGGIKLG GGL+RAYG   SE 
Sbjct: 64  HIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEG 123

Query: 173 LKSAQTCVVKSKVPMGVEVPFNLLGALYHQMQ 200
           L        K    M     +  LG + ++++
Sbjct: 124 LNHIGVVERKLMRIMHTSADYTWLGKIENELR 155

[Close]
BLAST of CmaCh03G008370 vs. Swiss-Prot
Match: YIGZ_ECOLI (IMPACT family member YigZ OS=Escherichia coli (strain K12) GN=yigZ PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 1 

Query: 65  KEIKKSKFIAIAGPVTNEQSAFSFLSQVR--EPRATHNCWAYQVG-----DQFRSNDDGE 124
           +EIKKS+FI +       ++A +F+  VR   P A H+C A+  G      Q   +DDGE
Sbjct: 15  EEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGE 74

Query: 125 PSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQT 174
           P+GTAGKP+ + ++ SG+  +  VV+RY+GGI LGTGGLV+AYGG  ++ L+   T
Sbjct: 75  PAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTT 130

[Close]
BLAST of CmaCh03G008370 vs. TrEMBL
Match: A0A0A0KGN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499080 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.1e-119
Identity = 221/249 (88.76%), Postives = 234/249 (93.98%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDM  T SSS+  NAGAYTTIKEI
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTP-NAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPV++EQSAFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240
           PMGVEVPF+LLG LYHQ+QSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKSNC
Sbjct: 181 PMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNC 240

Query: 241 SRELIFYKQ 250
           SREL+FYK+
Sbjct: 241 SRELVFYKR 248

[Close]
BLAST of CmaCh03G008370 vs. TrEMBL
Match: A0A061DJ51_THECC (Ribosomal protein S5 domain 2-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_000998 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.6e-102
Identity = 192/249 (77.11%), Postives = 217/249 (87.15%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSG-NAGAYTTIKE 60
           MPVAI +   P + Y     LN R S+SL ++   K  M TT SSSS+G NAGAYTTIKE
Sbjct: 1   MPVAITT---PGYSYCH--KLNHRLSASLSSLCTAKNPMVTTASSSSTGSNAGAYTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V  EKEIKKSKFIAIAGP++NEQSA SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTCEKEIKKSKFIAIAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSN 240
           VP+GVE+PF+LLG LYHQ+QSF  EDIKQDYD GKDGITMV+FKVDFDRVEKLE+ IK+N
Sbjct: 181 VPIGVEIPFDLLGVLYHQLQSFQAEDIKQDYDTGKDGITMVSFKVDFDRVEKLEETIKAN 240

Query: 241 CSRELIFYK 249
           CSREL+FYK
Sbjct: 241 CSRELVFYK 244

[Close]
BLAST of CmaCh03G008370 vs. TrEMBL
Match: A0A0B0MZ52_GOSAR (IMPACT family member in pol 5'region OS=Gossypium arboreum GN=F383_34538 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.2e-101
Identity = 190/249 (76.31%), Postives = 216/249 (86.75%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSS-SSGNAGAYTTIKE 60
           MPVAI     P +RY     LN R S+S+ A++  KK M TT SSS ++ NAGA+TTIKE
Sbjct: 1   MPVAIT----PGYRYCH--KLNHRLSASISALSTAKKPMVTTASSSGTTSNAGAFTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V FEKEIKKSKFIA+AGP++NEQSA SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTFEKEIKKSKFIAVAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG DR+MVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGFDRIMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSN 240
           VPMGVEVPF+LLG LYHQ+QSF  EDIKQDYD GKDG TMV+FKV+FDR EKLE+AIK+N
Sbjct: 181 VPMGVEVPFDLLGVLYHQLQSFEAEDIKQDYDTGKDGTTMVSFKVEFDRAEKLEEAIKAN 240

Query: 241 CSRELIFYK 249
           CSREL FYK
Sbjct: 241 CSRELEFYK 243

[Close]
BLAST of CmaCh03G008370 vs. TrEMBL
Match: A0A0D2PDZ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G233200 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.8e-100
Identity = 188/249 (75.50%), Postives = 217/249 (87.15%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSS-GNAGAYTTIKE 60
           MPV I +   P +RY     +N   S+S+ A++  KK M TT SSS +  NAGA+TTIKE
Sbjct: 1   MPVVITT---PGYRYCH--KVNHCLSASISALSTVKKPMVTTASSSGTPSNAGAFTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V FEKEIKKSKFIAIAGP++NEQSA SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTFEKEIKKSKFIAIAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG+DR+MVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGLDRIMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSN 240
           VPMGVEVPF+LLG LYHQ+QSF VEDIKQDYD GKDG TMV+FKV+FD+ EKLE+AIK+N
Sbjct: 181 VPMGVEVPFDLLGVLYHQLQSFEVEDIKQDYDTGKDGTTMVSFKVEFDQSEKLEEAIKAN 240

Query: 241 CSRELIFYK 249
           CSREL+FYK
Sbjct: 241 CSRELVFYK 244

[Close]
BLAST of CmaCh03G008370 vs. TrEMBL
Match: M5W4Q5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010339mg PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.1e-96
Identity = 180/220 (81.82%), Postives = 200/220 (90.91%), Query Frame = 1 

Query: 30  CAIARDKKDMFTTVSSSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQSAFSFL 89
           C  A   K M TT +SSSS N GAYTTIKE VRFEKEIKKSKFIAIAGP+ +EQSA SFL
Sbjct: 35  CIAAGANKAMVTTAASSSS-NGGAYTTIKERVRFEKEIKKSKFIAIAGPIPDEQSAQSFL 94

Query: 90  SQVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGI 149
           SQVR+ RATHNCWAY+VGDQ+RSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIR+FGGI
Sbjct: 95  SQVRDQRATHNCWAYKVGDQYRSNDDGEPSGTAGKPIHSAIESSGIDRVMVVVIRHFGGI 154

Query: 150 KLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQMQSFHVEDIKQD 209
           KLGTGGLVRAYGGVASECL++A TC+VKSKV MGVEVPF+LLG LYHQ+QSF VEDIKQD
Sbjct: 155 KLGTGGLVRAYGGVASECLRNAPTCLVKSKVRMGVEVPFDLLGVLYHQLQSFQVEDIKQD 214

Query: 210 YDCGKDGITMVTFKVDFDRVEKLEDAIKSNCSRELIFYKQ 250
           Y+ GKDGIT+VTF+VDFDR+EKLEDAIKS+CSR+L+FYK+
Sbjct: 215 YETGKDGITVVTFQVDFDRIEKLEDAIKSHCSRDLVFYKR 253

[Close]
BLAST of CmaCh03G008370 vs. TAIR10
Match: AT4G38090.1 (AT4G38090.1 Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 313.9 bits (803), Expect = 8.7e-86
Identity = 152/204 (74.51%), Postives = 180/204 (88.24%), Query Frame = 1 

Query: 46  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQ 105
           S + N+G++TT+KE V  EKEIKKSKFIAIAGP+++EQSA  FLSQVR+PRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 106 VGDQF-RSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 165
           +GD   R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 166 SECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKV 225
           S+CLK+A +C+VKSKV MGVEV F+LLG LY+Q+QS H EDIK+DYD GKDG  MV+FKV
Sbjct: 150 SDCLKTAPSCLVKSKVQMGVEVTFDLLGVLYNQLQSCHAEDIKEDYDTGKDGTAMVSFKV 209

Query: 226 DFDRVEKLEDAIKSNCSRELIFYK 249
           +FD V+KLEDAIKSNC R+L+FYK
Sbjct: 210 EFDLVDKLEDAIKSNCRRDLVFYK 233

[Close]
BLAST of CmaCh03G008370 vs. NCBI nr
Match: gi|449451395|ref|XP_004143447.1| (PREDICTED: uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 7.4e-119
Identity = 221/249 (88.76%), Postives = 234/249 (93.98%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDM  T SSS+  NAGAYTTIKEI
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTP-NAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPV++EQSAFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240
           PMGVEVPF+LLG LYHQ+QSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKSNC
Sbjct: 181 PMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNC 240

Query: 241 SRELIFYKQ 250
           SREL+FYK+
Sbjct: 241 SRELVFYKR 248

[Close]
BLAST of CmaCh03G008370 vs. NCBI nr
Match: gi|659079997|ref|XP_008440556.1| (PREDICTED: uncharacterized protein LOC103484936 isoform X1 [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 2.1e-118
Identity = 222/249 (89.16%), Postives = 233/249 (93.57%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60
           MPVAIA AAAP+FR+FK L LNTR SSSL AI R++K M  T SSSS  NAGAYTTIKEI
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSR-NAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPV+NEQSAFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240
           PMGVEVPF+LLG LYHQ+QSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKSNC
Sbjct: 181 PMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNC 240

Query: 241 SRELIFYKQ 250
           SREL+FYK+
Sbjct: 241 SRELVFYKR 248

[Close]
BLAST of CmaCh03G008370 vs. NCBI nr
Match: gi|778719042|ref|XP_011657955.1| (PREDICTED: uncharacterized protein LOC101204297 isoform X2 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 2.5e-106
Identity = 208/249 (83.53%), Postives = 220/249 (88.35%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDM  T SSS+  NAGAYTTIKEI
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTP-NAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPV++EQSAFSFLSQV              GDQ+RSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVSSEQSAFSFLSQV--------------GDQYRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240
           PMGVEVPF+LLG LYHQ+QSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKSNC
Sbjct: 181 PMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNC 234

Query: 241 SRELIFYKQ 250
           SREL+FYK+
Sbjct: 241 SRELVFYKR 234

[Close]
BLAST of CmaCh03G008370 vs. NCBI nr
Match: gi|659080001|ref|XP_008440557.1| (PREDICTED: uncharacterized protein LOC103484936 isoform X2 [Cucumis melo])

HSP 1 Score: 392.1 bits (1006), Expect = 7.2e-106
Identity = 209/249 (83.94%), Postives = 219/249 (87.95%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60
           MPVAIA AAAP+FR+FK L LNTR SSSL AI R++K M  T SSSS  NAGAYTTIKEI
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSR-NAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPV+NEQSAFSFLSQV              GDQ+RSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQV--------------GDQYRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240
           PMGVEVPF+LLG LYHQ+QSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKSNC
Sbjct: 181 PMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNC 234

Query: 241 SRELIFYKQ 250
           SREL+FYK+
Sbjct: 241 SRELVFYKR 234

[Close]
BLAST of CmaCh03G008370 vs. NCBI nr
Match: gi|590706727|ref|XP_007047803.1| (Ribosomal protein S5 domain 2-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 379.8 bits (974), Expect = 3.7e-102
Identity = 192/249 (77.11%), Postives = 217/249 (87.15%), Query Frame = 1 

Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSG-NAGAYTTIKE 60
           MPVAI +   P + Y     LN R S+SL ++   K  M TT SSSS+G NAGAYTTIKE
Sbjct: 1   MPVAITT---PGYSYCH--KLNHRLSASLSSLCTAKNPMVTTASSSSTGSNAGAYTTIKE 60

Query: 61  IVRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPS 120
            V  EKEIKKSKFIAIAGP++NEQSA SFL+QV++PRATHNCWAY+VGDQ+RSNDDGEPS
Sbjct: 61  TVTCEKEIKKSKFIAIAGPISNEQSAHSFLNQVKDPRATHNCWAYKVGDQYRSNDDGEPS 120

Query: 121 GTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSK 180
           GTAGKPIHSAIVSSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGVASECL++A TC+VKSK
Sbjct: 121 GTAGKPIHSAIVSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLRNAPTCLVKSK 180

Query: 181 VPMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSN 240
           VP+GVE+PF+LLG LYHQ+QSF  EDIKQDYD GKDGITMV+FKVDFDRVEKLE+ IK+N
Sbjct: 181 VPIGVEIPFDLLGVLYHQLQSFQAEDIKQDYDTGKDGITMVSFKVDFDRVEKLEETIKAN 240

Query: 241 CSRELIFYK 249
           CSREL+FYK
Sbjct: 241 CSRELVFYK 244

The following BLAST results are available for this feature:
BLAST of CmaCh03G008370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YPOL_THETH4.4e-3147.83IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus PE=3 SV=... [more]
Y722_HAEIN1.3e-2236.59IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM ... [more]
YVYE_BACSU5.4e-2139.47IMPACT family member YvyE OS=Bacillus subtilis (strain 168) GN=yvyE PE=3 SV=2[more]
YIGZ_ECOLI1.3e-1943.97IMPACT family member YigZ OS=Escherichia coli (strain K12) GN=yigZ PE=1 SV=2[more]
BLAST of CmaCh03G008370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGN8_CUCSA5.1e-11988.76Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499080 PE=4 SV=1[more]
A0A061DJ51_THECC2.6e-10277.11Ribosomal protein S5 domain 2-like superfamily protein isoform 1 OS=Theobroma ca... [more]
A0A0B0MZ52_GOSAR2.2e-10176.31IMPACT family member in pol 5'region OS=Gossypium arboreum GN=F383_34538 PE=4 SV... [more]
A0A0D2PDZ2_GOSRA1.8e-10075.50Uncharacterized protein OS=Gossypium raimondii GN=B456_007G233200 PE=4 SV=1[more]
M5W4Q5_PRUPE2.1e-9681.82Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010339mg PE=4 SV=1[more]
BLAST of CmaCh03G008370 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38090.18.7e-8674.51 Ribosomal protein S5 domain 2-like superfamily protein[more]
BLAST of CmaCh03G008370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451395|ref|XP_004143447.1|7.4e-11988.76PREDICTED: uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus][more]
gi|659079997|ref|XP_008440556.1|2.1e-11889.16PREDICTED: uncharacterized protein LOC103484936 isoform X1 [Cucumis melo][more]
gi|778719042|ref|XP_011657955.1|2.5e-10683.53PREDICTED: uncharacterized protein LOC101204297 isoform X2 [Cucumis sativus][more]
gi|659080001|ref|XP_008440557.1|7.2e-10683.94PREDICTED: uncharacterized protein LOC103484936 isoform X2 [Cucumis melo][more]
gi|590706727|ref|XP_007047803.1|3.7e-10277.11Ribosomal protein S5 domain 2-like superfamily protein isoform 1 [Theobroma caca... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001498Impact_N
IPR020568Ribosomal_S5_D2-typ_fold
IPR023582Impact
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G008370.1CmaCh03G008370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001498Impact, N-terminalGENE3DG3DSA:3.30.230.30coord: 54..174
score: 1.6
IPR001498Impact, N-terminalPFAMPF01205UPF0029coord: 68..168
score: 2.2
IPR020568Ribosomal protein S5 domain 2-type foldunknownSSF54211Ribosomal protein S5 domain 2-likecoord: 54..172
score: 6.07
IPR023582Impact familyPANTHERPTHR16301IMPACT-RELATEDcoord: 19..249
score: 5.0
NoneNo IPR availablePANTHERPTHR16301:SF0IMPACT FAMILY MEMBER YIGZcoord: 19..249
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G008370Cucsa.104040Cucumber (Gy14) v1cgycmaB0231
CmaCh03G008370Cla014112Watermelon (97103) v1cmawmB632
CmaCh03G008370Csa6G499080Cucumber (Chinese Long) v2cmacuB681
CmaCh03G008370MELO3C007722Melon (DHL92) v3.5.1cmameB617
CmaCh03G008370ClCG01G018420Watermelon (Charleston Gray)cmawcgB579
CmaCh03G008370CSPI06G29870Wild cucumber (PI 183967)cmacpiB689
CmaCh03G008370CmoCh03G008780Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G008370Lsi01G008050Bottle gourd (USVL1VR-Ls)cmalsiB597
CmaCh03G008370Cp4.1LG10g01510Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G008370MELO3C007722.2Melon (DHL92) v3.6.1cmamedB703
CmaCh03G008370CsaV3_6G045090Cucumber (Chinese Long) v3cmacucB0809
CmaCh03G008370Cla97C01G017780Watermelon (97103) v2cmawmbB670
CmaCh03G008370Bhi03G000864Wax gourdcmawgoB0798
CmaCh03G008370CsGy6G029340Cucumber (Gy14) v2cgybcmaB831
CmaCh03G008370Carg00725Silver-seed gourdcarcmaB0567
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G008370Wax gourdcmawgoB0812
CmaCh03G008370Cucurbita maxima (Rimu)cmacmaB187
CmaCh03G008370Cucurbita maxima (Rimu)cmacmaB518
CmaCh03G008370Cucurbita maxima (Rimu)cmacmaB523
CmaCh03G008370Cucumber (Gy14) v1cgycmaB0458
CmaCh03G008370Cucumber (Gy14) v1cgycmaB0872
CmaCh03G008370Cucurbita moschata (Rifu)cmacmoB635
CmaCh03G008370Cucurbita moschata (Rifu)cmacmoB661
CmaCh03G008370Cucurbita moschata (Rifu)cmacmoB667
CmaCh03G008370Wild cucumber (PI 183967)cmacpiB660
CmaCh03G008370Cucumber (Chinese Long) v2cmacuB652
CmaCh03G008370Melon (DHL92) v3.5.1cmameB597
CmaCh03G008370Watermelon (Charleston Gray)cmawcgB601
CmaCh03G008370Watermelon (97103) v1cmawmB617
CmaCh03G008370Cucurbita pepo (Zucchini)cmacpeB657
CmaCh03G008370Cucurbita pepo (Zucchini)cmacpeB671
CmaCh03G008370Cucurbita pepo (Zucchini)cmacpeB686
CmaCh03G008370Cucurbita pepo (Zucchini)cmacpeB688
CmaCh03G008370Bottle gourd (USVL1VR-Ls)cmalsiB614
CmaCh03G008370Bottle gourd (USVL1VR-Ls)cmalsiB620
CmaCh03G008370Cucumber (Gy14) v2cgybcmaB237
CmaCh03G008370Melon (DHL92) v3.6.1cmamedB681
CmaCh03G008370Melon (DHL92) v3.6.1cmamedB688
CmaCh03G008370Silver-seed gourdcarcmaB0082
CmaCh03G008370Silver-seed gourdcarcmaB1055
CmaCh03G008370Silver-seed gourdcarcmaB1287
CmaCh03G008370Cucumber (Chinese Long) v3cmacucB0779
CmaCh03G008370Cucumber (Chinese Long) v3cmacucB0787
CmaCh03G008370Watermelon (97103) v2cmawmbB699