CmoCh03G006070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G006070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr03 : 5729575 .. 5731079 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTCGTTCAATCTTTGCCGTAAAATCGTCTCTGACAGCTTCTATTGTTTTTCATTTTCTGCACAAACAGCAGTAGCAACAACAAAAACAACCACTTCCATCTTAGTTTGTTTGTTTATTCTCCTCCTCTTCCAATTATCCCAAAATCAAGTACGATCAAAATCCGGGATCTATAAATTTCCGTGTCTATTGGTTGATCTCCACGTTCATAATCCCGTTCCTGAATCCCTACCAAAATCACGTTTCAGCTGTGTTAATTTTTCAACGATCCGGTTGAAAAATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAACAGATGACGTCTTCCGGTGAGCAGAATGTGTTCTTTAAAGATATAACTCAACCCGTGAGATAATTTCTCTCTGAGTTAATTTTGTTGCGAATTGTTTCATTAGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAAGCTCTCCATCCTCCGTTTTGTCGATCAAAATTCAAATGGAGGCTTCATACGATGGAGGATTTCGTTTATAAGCATCATCGACATTGATTGACGAAATGGGAAACAGATGCGGTTTCTAATGAAGCCTCTTGTTTTATGTGGAAATTGAAGTGGGGTTACTTTGGTTTGTGCTGAATTGTTTTAATGAAGGCAACAAAAGAAGACAAAATGCCCAATGGTACAGAGGCTGGGCTGCTTGAGTTTGGCTTAGCCTCGAGATATGACAGCAGAGGAGCTCAGAAGATCGTATACGTGTTCTAACGGCTAATCAACCTTACATGGTGATTTTAAGTAAACAGAGAAAAGATTTTGCTGTTCATAATCTTGTTCTTGAAAGATGAACATACGTCAGTGTCTTATAAAGATATTGTGGAACAATAATAGTTGATTGATTTTGAATTGAGTGAGTGGTTGAAGAATTTTGCAATGCTAACCCATGTATTAAATTTTGATATCATTGTGTTGCAAAGAAATGGATTCAGAAAGAGCT

mRNA sequence

GATTCGTTCAATCTTTGCCGTAAAATCGTCTCTGACAGCTTCTATTGTTTTTCATTTTCTGCACAAACAGCAGTAGCAACAACAAAAACAACCACTTCCATCTTAGTTTGTTTGTTTATTCTCCTCCTCTTCCAATTATCCCAAAATCAAGTACGATCAAAATCCGGGATCTATAAATTTCCGTGTCTATTGGTTGATCTCCACGTTCATAATCCCGTTCCTGAATCCCTACCAAAATCACGTTTCAGCTGTGTTAATTTTTCAACGATCCGGTTGAAAAATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAACAGATGACGTCTTCCGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAAGCTCTCCATCCTCCGTTTTGTCGATCAAAATTCAAATGGAGGCTTCATACGATGGAGGATTTCGTTTATAAGCATCATCGACATTGATTGACGAAATGGGAAACAGATGCGGTTTCTAATGAAGCCTCTTGTTTTATGTGGAAATTGAAGTGGGGTTACTTTGGTTTGTGCTGAATTGTTTTAATGAAGGCAACAAAAGAAGACAAAATGCCCAATGGTACAGAGGCTGGGCTGCTTGAGTTTGGCTTAGCCTCGAGATATGACAGCAGAGGAGCTCAGAAGATCGTATACGTGTTCTAACGGCTAATCAACCTTACATGGTGATTTTAAGTAAACAGAGAAAAGATTTTGCTGTTCATAATCTTGTTCTTGAAAGATGAACATACGTCAGTGTCTTATAAAGATATTGTGGAACAATAATAGTTGATTGATTTTGAATTGAGTGAGTGGTTGAAGAATTTTGCAATGCTAACCCATGTATTAAATTTTGATATCATTGTGTTGCAAAGAAATGGATTCAGAAAGAGCT

Coding sequence (CDS)

ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAACAGATGACGTCTTCCGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA

Homology

[Close]

BLAST of CmoCh03G006070 vs. TrEMBL
Match: A0A0A0KHQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511630 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-50
Identity = 133/204 (65.20%), Postives = 155/204 (75.98%), Query Frame = 1


Query: 1   MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVS 60
           ME    QR++ERERRRIRDRERRSSM++EQRERHLA RRRNY +RRL+ R+ + +NPS S
Sbjct: 52  MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 111

Query: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ------MTSSGSETLDPKAEI 120
                  TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ+      +TSS SE LDP+AEI
Sbjct: 112 G------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEI 171

Query: 121 LQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLA 180
           LQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SLE D  RSS++LR  RVK LA
Sbjct: 172 LQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLA 231

Query: 181 RKMNSSAKPSAVPDESLNQTAIAG 199
           R MNSS KPSA  + S ++T IAG
Sbjct: 232 RMMNSSLKPSA-DESSQHKTTIAG 245

[Close]

BLAST of CmoCh03G006070 vs. TrEMBL
Match: B9IH46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s01120g PE=4 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 1


Query: 7   QRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPIEMA 66
           Q+++ERERRR+RDR+RR +M+VE+RE+HLA RRRNY LRR R+R+VR    S+    EM 
Sbjct: 4   QKEQERERRRLRDRQRRQAMSVEEREKHLARRRRNYQLRRQRARNVRDPQASLVDSDEML 63

Query: 67  ETNSHQTVAETSIAELDLQRNGITLIDFNHEQQMTSSGS------ETLDPKAEILQGRVR 126
              S+      ++  + +Q NGI+ +D +  Q   ++G+      E    K   L  R R
Sbjct: 64  MLPSNGN--NQAVISVPVQSNGISDVDLDQRQGSVNAGNANSVGLEIPAHKLAKLPIRSR 123

Query: 127 LSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSL-ECDPRRSSKALRLNRVKHLARKMNS 186
           L+HI+ LARS+     +    +  G+     ++   C P    K LRLNRVKHLAR ++S
Sbjct: 124 LNHIKHLARSLADTLDIGDSHKITGDLTMTGYATSNCTP---PKPLRLNRVKHLARVLSS 183

Query: 187 SAKPSAVPD 189
              P+ VPD
Sbjct: 184 DVTPTTVPD 187

[Close]

BLAST of CmoCh03G006070 vs. TrEMBL
Match: M5WXS1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021047mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.6e-14
Identity = 78/189 (41.27%), Postives = 103/189 (54.50%), Query Frame = 1


Query: 7   QRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPIEMA 66
           QR++ERERRRIRDR+RR SMTVEQRERHLA RRRNY LRRLR+ + +    S        
Sbjct: 14  QREQERERRRIRDRQRRQSMTVEQRERHLARRRRNYQLRRLRAENAKVDCQS------QQ 73

Query: 67  ETNSHQTVAETSIAELDLQRNGITLIDFNHEQQMTSSGSETLDPKAEILQGRVRLSHIRR 126
            +N H+  A     E +  +        + E+   S   E    K+     R+RLSHIRR
Sbjct: 74  ISNEHEEAAAAGGNEGNDDQEVTQTEKLSAERLQYSECLEAAACKSANFTKRLRLSHIRR 133

Query: 127 LARS--------IGIHQMM-DSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKM 186
           LARS        IG HQ++ D + + + N     ++   D  R    LRLNRVK LAR +
Sbjct: 134 LARSLNHLGGEAIGNHQIVADVITKGDAN-----NTSYFDSGRLPHGLRLNRVKRLARTL 191

[Close]

BLAST of CmoCh03G006070 vs. TrEMBL
Match: B9HCV8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01710g PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-13
Identity = 74/191 (38.74%), Postives = 106/191 (55.50%), Query Frame = 1


Query: 7   QRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPIEMA 66
           Q+++ERERRR+RDR+RR SM+VE+RE HLA RRRNY LRR R+++VR    + S  ++  
Sbjct: 14  QKEQERERRRLRDRQRRQSMSVEERENHLARRRRNYQLRRERAQNVREPQINQSGLVDSD 73

Query: 67  ET------NSHQTVAETSIAELDLQRNGITLIDFNHEQ------QMTSSGSETLDPKAEI 126
           E+       +HQT     +     Q NG+   D +  Q         S G E    K   
Sbjct: 74  ESPMLLSDENHQTAISVPV-----QSNGVCHADLDQRQGSFNAGNANSVGLEVPAHKLAK 133

Query: 127 LQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLE------CDPRRSSKALRLN 180
           L  R RL+HI+ LARS     ++D+++  + +    D +++      C P    KALRLN
Sbjct: 134 LPIRSRLNHIKHLARS-----LVDTLDIGDTHKIPADLTMKGETASNCTP---PKALRLN 191

[Close]

BLAST of CmoCh03G006070 vs. TrEMBL
Match: A0A0D2RDH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G249500 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12
Identity = 72/189 (38.10%), Postives = 110/189 (58.20%), Query Frame = 1


Query: 4   SPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPI 63
           S  +++ ERERRRIRDR+RR SM++E++E+HLA RRRNY LRR R+   R + P   SPI
Sbjct: 9   SEIRKELERERRRIRDRQRRQSMSLEEKEKHLARRRRNYQLRRQRAEMARLNPP--ISPI 68

Query: 64  EMAETNSHQTVAETSI-----AELDLQRNGITLIDFNHEQQ--MTSSGSETLD---PKAE 123
           ++  +N+   V+ + +     A++ +  +     D   +Q+  + +  S +LD    K  
Sbjct: 69  QLPLSNALTCVSVSDVSPRCNADVAVAADAFLRTDHGQQQRLILDTGNSHSLDVPAHKLA 128

Query: 124 ILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHL 183
           IL G+VRL+ I+ LAR+I    + D +  S G    E+ +  C    SSK LRLNR+K L
Sbjct: 129 ILPGKVRLNRIKHLARAIN-DPVGDGV--SIGGLMKENGTSNC---LSSKGLRLNRIKRL 188

[Close]

BLAST of CmoCh03G006070 vs. TAIR10
Match: AT4G16460.1 (AT4G16460.1 unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 1


Query: 1   MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVS 60
           +E   S++++ERERRR+RDRERR SM+ ++RERHLA RR+NY LRR R+   R     + 
Sbjct: 6   VESRSSRKEQERERRRLRDRERRQSMSQDERERHLARRRKNYQLRRQRAEVNR-----LD 65

Query: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQMTSSGSETLDPKAEI--LQGR 120
           SPI+ A T  +Q    +         +G + ++         S    + P  E+  + G 
Sbjct: 66  SPIQ-AITGGNQAALNSP------PDSGASFVE---------SDQSVVIPVEELAKMMGT 125

Query: 121 VRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLAR 176
           +RL+ ++ LAR++         E SN    + D    C     S  LRL+R+K L R
Sbjct: 126 IRLTRLKHLARTLNKSSTSTGAESSNTG--ATDAKTRC---AMSNGLRLSRIKRLVR 156

[Close]

BLAST of CmoCh03G006070 vs. NCBI nr
Match: gi|659079110|ref|XP_008440080.1| (PREDICTED: uncharacterized protein LOC103484665 [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50
Identity = 133/206 (64.56%), Postives = 157/206 (76.21%), Query Frame = 1


Query: 1   MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVS 60
           ME S  +R++ERERRRIRDRERRSSM++EQRERHLA RRRNY LRRL+ ++V+ +NPS S
Sbjct: 1   MEGSALRREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLKYQNVKTTNPSFS 60

Query: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ------MTSSGSETLDPKAEI 120
                  TNS + ++ETSIAELDLQ+NGI L+ FNHEQ+      +TSS SETLDP+AEI
Sbjct: 61  G------TNSFKAISETSIAELDLQQNGIMLVGFNHEQESLNPDSITSSSSETLDPRAEI 120

Query: 121 LQGRVRLSHIRRLARSIGIHQMMDSME-ESNGNCKSEDHSLECDPRRSSKALRLNRVKHL 180
           LQGRVRLSHIRRLARSIGIHQM   +  ES  NCKS+D +LE D  R SK+LR   VK L
Sbjct: 121 LQGRVRLSHIRRLARSIGIHQMFSQVGLESTSNCKSKDSNLEYDLSRPSKSLR--HVKRL 180

Query: 181 ARKMNSSAKPSAVPDESLNQTAIAGS 200
           AR MNSS KPSA  + S +QT IAGS
Sbjct: 181 ARMMNSSVKPSA-NESSQHQTIIAGS 197

[Close]

BLAST of CmoCh03G006070 vs. NCBI nr
Match: gi|778720150|ref|XP_011658117.1| (PREDICTED: uncharacterized protein LOC101212529 isoform X3 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 131/198 (66.16%), Postives = 153/198 (77.27%), Query Frame = 1


Query: 7   QRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPIEMA 66
           QR++ERERRRIRDRERRSSM++EQRERHLA RRRNY +RRL+ R+ + +NPS S      
Sbjct: 50  QREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFSG----- 109

Query: 67  ETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ------MTSSGSETLDPKAEILQGRVR 126
            TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ+      +TSS SE LDP+AEILQGRVR
Sbjct: 110 -TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 169

Query: 127 LSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKMNSS 186
           LSHIRRLARSIGIHQM  S  ES  NCKSED SLE D  RSS++LR  RVK LAR MNSS
Sbjct: 170 LSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLARMMNSS 229

Query: 187 AKPSAVPDESLNQTAIAG 199
            KPSA  + S ++T IAG
Sbjct: 230 LKPSA-DESSQHKTTIAG 237

[Close]

BLAST of CmoCh03G006070 vs. NCBI nr
Match: gi|778720146|ref|XP_004134985.2| (PREDICTED: uncharacterized protein LOC101212529 isoform X2 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 133/204 (65.20%), Postives = 155/204 (75.98%), Query Frame = 1


Query: 1   MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVS 60
           ME    QR++ERERRRIRDRERRSSM++EQRERHLA RRRNY +RRL+ R+ + +NPS S
Sbjct: 52  MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 111

Query: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ------MTSSGSETLDPKAEI 120
                  TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ+      +TSS SE LDP+AEI
Sbjct: 112 G------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEI 171

Query: 121 LQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLA 180
           LQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SLE D  RSS++LR  RVK LA
Sbjct: 172 LQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLA 231

Query: 181 RKMNSSAKPSAVPDESLNQTAIAG 199
           R MNSS KPSA  + S ++T IAG
Sbjct: 232 RMMNSSLKPSA-DESSQHKTTIAG 245

[Close]

BLAST of CmoCh03G006070 vs. NCBI nr
Match: gi|778720142|ref|XP_011658116.1| (PREDICTED: uncharacterized protein LOC101212529 isoform X1 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 133/204 (65.20%), Postives = 155/204 (75.98%), Query Frame = 1


Query: 1   MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVS 60
           ME    QR++ERERRRIRDRERRSSM++EQRERHLA RRRNY +RRL+ R+ + +NPS S
Sbjct: 52  MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 111

Query: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ------MTSSGSETLDPKAEI 120
                  TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ+      +TSS SE LDP+AEI
Sbjct: 112 G------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEI 171

Query: 121 LQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLA 180
           LQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SLE D  RSS++LR  RVK LA
Sbjct: 172 LQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLA 231

Query: 181 RKMNSSAKPSAVPDESLNQTAIAG 199
           R MNSS KPSA  + S ++T IAG
Sbjct: 232 RMMNSSLKPSA-DESSQHKTTIAG 245

[Close]

BLAST of CmoCh03G006070 vs. NCBI nr
Match: gi|1009166884|ref|XP_015901826.1| (PREDICTED: uncharacterized protein LOC107434846 [Ziziphus jujuba])

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17
Identity = 82/191 (42.93%), Postives = 108/191 (56.54%), Query Frame = 1


Query: 7   QRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPI--- 66
           QR++ERERRRIRDR+RR SMT+EQRERHLA RRRNY LRRLR+ S R  +  V   I   
Sbjct: 16  QREQERERRRIRDRQRRQSMTLEQRERHLARRRRNYQLRRLRAESSRLGSHCVDPNIIAD 75

Query: 67  --EMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQMTSSGSET--LDPKAEILQGRV 126
             EM   N +  +   S  E     +G+  I F   ++  + G ++  ++  A  +  R+
Sbjct: 76  ANEMVFNNEYDAI--DSNPESGFHSDGVNPIGFIQAEEQNAQGLQSVGVEALAHNITSRL 135

Query: 127 RLSHIRRLARSI----------GIHQMM-DSMEESNGNCKSEDHSLECDPRRSSKALRLN 180
           RLSHIRRLARS+          G HQ++ + M+    N        ECD  RS+  LRLN
Sbjct: 136 RLSHIRRLARSLNQSRGEALVTGNHQVVAEPMQRHQANTTGLQVG-ECDLVRSTGGLRLN 195

The following BLAST results are available for this feature:

BLAST of CmoCh03G006070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh03G006070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHQ0_CUCSA	2.4e-50	65.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511630 PE=4 SV=1	[more]
B9IH46_POPTR	3.5e-17	39.68	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s01120g PE=4 SV=2	[more]
M5WXS1_PRUPE	3.6e-14	41.27	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021047mg PE=4 S...	[more]
B9HCV8_POPTR	3.1e-13	38.74	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01710g PE=4 SV=1	[more]
A0A0D2RDH0_GOSRA	2.0e-12	38.10	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G249500 PE=4 SV=1	[more]

BLAST of CmoCh03G006070 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16460.1	1.8e-09	33.90	unknown protein	[more]

BLAST of CmoCh03G006070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079110\|ref\|XP_008440080.1\|	2.0e-50	64.56	PREDICTED: uncharacterized protein LOC103484665 [Cucumis melo]	[more]
gi\|778720150\|ref\|XP_011658117.1\|	3.5e-50	66.16	PREDICTED: uncharacterized protein LOC101212529 isoform X3 [Cucumis sativus]	[more]
gi\|778720146\|ref\|XP_004134985.2\|	3.5e-50	65.20	PREDICTED: uncharacterized protein LOC101212529 isoform X2 [Cucumis sativus]	[more]
gi\|778720142\|ref\|XP_011658116.1\|	3.5e-50	65.20	PREDICTED: uncharacterized protein LOC101212529 isoform X1 [Cucumis sativus]	[more]
gi\|1009166884\|ref\|XP_015901826.1\|	1.0e-17	42.93	PREDICTED: uncharacterized protein LOC107434846 [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G006070.1	CmoCh03G006070.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G006070	CmaCh03G005810	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G006070	Cla014397	Watermelon (97103) v1	cmowmB623
CmoCh03G006070	Csa6G511630	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G006070	MELO3C007443	Melon (DHL92) v3.5.1	cmomeB600
CmoCh03G006070	CSPI06G32940	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G006070	Lsi01G004870	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G006070	Cp4.1LG10g10020	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G006070	MELO3C007443.2	Melon (DHL92) v3.6.1	cmomedB686
CmoCh03G006070	CsaV3_6G048400	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G006070	Cla97C01G020960	Watermelon (97103) v2	cmowmbB642
CmoCh03G006070	Bhi03G000506	Wax gourd	cmowgoB0781
CmoCh03G006070	Carg00502	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G006070	Silver-seed gourd	carcmoB0886
CmoCh03G006070	Cucurbita moschata (Rifu)	cmocmoB455
CmoCh03G006070	Cucumber (Gy14) v1	cgycmoB0042
CmoCh03G006070	Cucurbita maxima (Rimu)	cmacmoB419
CmoCh03G006070	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G006070	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G006070	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G006070	Cucurbita pepo (Zucchini)	cmocpeB630
CmoCh03G006070	Cucumber (Gy14) v2	cgybcmoB118
CmoCh03G006070	Cucumber (Gy14) v2	cgybcmoB811