Carg00502 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAGATGACGTCTTCCGGTGAGCAGAATGTGTTCTTTAAAGATATAACTCAACCCGTGAGATAATTTCTCTCTGAGTTAATTTTGTTGCGAATTGTTTCATTAGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAGATGACGTCTTCCGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAGATGACGTCTTCCGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQMTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAGSTDL
BLAST of Carg00502 vs. NCBI nr
Match: XP_022949888.1 (uncharacterized protein LOC111453147 [Cucurbita moschata]) HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83 Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg00502 vs. NCBI nr
Match: XP_023543050.1 (uncharacterized protein LOC111803033 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75 Identity = 156/168 (92.86%), Postives = 160/168 (95.24%), Query Frame = 0
BLAST of Carg00502 vs. NCBI nr
Match: XP_022978880.1 (uncharacterized protein LOC111478702 [Cucurbita maxima] >XP_022978881.1 uncharacterized protein LOC111478702 [Cucurbita maxima]) HSP 1 Score: 259.6 bits (662), Expect = 8.7e-66 Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of Carg00502 vs. NCBI nr
Match: XP_004134985.2 (PREDICTED: uncharacterized protein LOC101212529 isoform X2 [Cucumis sativus] >KGN49048.1 hypothetical protein Csa_6G511630 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36 Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Carg00502 vs. NCBI nr
Match: XP_011658116.1 (PREDICTED: uncharacterized protein LOC101212529 isoform X1 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36 Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A0A0KHQ0|A0A0A0KHQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 9.6e-37 Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A1S3B0B1|A0A1S3B0B1_CUCME (uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 3.1e-35 Identity = 100/163 (61.35%), Postives = 118/163 (72.39%), Query Frame = 0
BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A2N9J117|A0A2N9J117_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58011 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04 Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A2I4F9V7|A0A2I4F9V7_9ROSI (uncharacterized protein LOC108996843 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996843 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04 Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A2I4F9T7|A0A2I4F9T7_9ROSI (uncharacterized protein LOC108996843 isoform X1 OS=Juglans regia OX=51240 GN=LOC108996843 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04 Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|