Carg00502 (gene) Silver-seed gourd

NameCarg00502
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_014 : 64650 .. 65342 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAGATGACGTCTTCCGGTGAGCAGAATGTGTTCTTTAAAGATATAACTCAACCCGTGAGATAATTTCTCTCTGAGTTAATTTTGTTGCGAATTGTTTCATTAGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA

mRNA sequence

ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAGATGACGTCTTCCGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA

Coding sequence (CDS)

ATGGAAGAATCGCCATCGCAGAGGGACAGGGAGAGAGAACGACGCCGTATAAGGGACAGGGAGAGAAGATCGTCGATGACCGTAGAACAGAGAGAGAGGCATCTCGCATGCCGCCGACGAAACTACCATCTACGAAGACTGAGATCTCGAAGCGTAAGAGCTTCGAATCCAAGCGTTTCGTCACCAATTGAAATGGCTGAAACCAATTCGCATCAGACAGTCGCAGAGACTTCCATTGCAGAGCTTGATCTGCAACGAAATGGGATTACGCTCATTGATTTCAACCACGAACAGATGACGTCTTCCGGTTCCGAAACTTTGGACCCAAAAGCTGAAATTCTTCAGGGGAGGGTTCGTTTGAGTCATATTCGACGACTTGCGCGTTCAATTGGGATTCACCAAATGATGGATTCCATGGAAGAATCGAATGGAAATTGCAAGTCTGAGGATCATAGCTTGGAATGTGATCCAAGAAGATCGTCGAAAGCATTACGGCTAAATCGCGTGAAGCATCTCGCGAGAAAGATGAATTCTTCTGCGAAGCCATCGGCTGTTCCTGATGAATCACTAAATCAAACTGCCATTGCGGGCAGTACTGATCTCTAA

Protein sequence

MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQMTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAGSTDL
BLAST of Carg00502 vs. NCBI nr
Match: XP_022949888.1 (uncharacterized protein LOC111453147 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0

Query: 1   MEESPSXXXXXXXXXXXXXXXXXXXXXXXXXXXHLACRRRNYHLRRLRSRSVRASNPSVS 60
           MEESPSXXXXXXXXXXXXXXXXXXXXXXXXXXXHLACRRRNYHLRRLRSRSVRASNPSVS
Sbjct: 1   MEESPSXXXXXXXXXXXXXXXXXXXXXXXXXXXHLACRRRNYHLRRLRSRSVRASNPSVS 60

Query: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHE-QMTSSGSETLDPKAEILQGRVR 120
           SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHE QMTSSGSETLDPKAEILQGRVR
Sbjct: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQMTSSGSETLDPKAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKMNSS 180
           LSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKMNSS
Sbjct: 121 LSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLARKMNSS 180

Query: 181 AKPSAVPDESLNQTAIAGSTDL 202
           AKPSAVPDESLNQTAIAGSTDL
Sbjct: 181 AKPSAVPDESLNQTAIAGSTDL 202

BLAST of Carg00502 vs. NCBI nr
Match: XP_023543050.1 (uncharacterized protein LOC111803033 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 156/168 (92.86%), Postives = 160/168 (95.24%), Query Frame = 0

Query: 35  LACRRRNYHLRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDF 94
           LACRRRNYHLRRLRSRSVR +NPSVSSPIEMAETNSHQTVAETSIAELDLQRNG+TLIDF
Sbjct: 35  LACRRRNYHLRRLRSRSVRTTNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGLTLIDF 94

Query: 95  NHE-QMTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSL 154
           NHE QMTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSM ES GNCKSEDHSL
Sbjct: 95  NHEQQMTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMAESTGNCKSEDHSL 154

Query: 155 ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAGSTDL 202
           ECD R+SSKALRLNRVKHLARKMNSSAKPSA  DES NQTAIAGST+L
Sbjct: 155 ECDQRKSSKALRLNRVKHLARKMNSSAKPSAAEDESQNQTAIAGSTNL 202

BLAST of Carg00502 vs. NCBI nr
Match: XP_022978880.1 (uncharacterized protein LOC111478702 [Cucurbita maxima] >XP_022978881.1 uncharacterized protein LOC111478702 [Cucurbita maxima])

HSP 1 Score: 259.6 bits (662), Expect = 8.7e-66
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0

Query: 49  SRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHE-QMTSSGSETL 108
           SRSVR +NPSVSSPIEMAETNS+QTVAETSIAELDLQRNG+TLIDFNHE Q+TSSGSETL
Sbjct: 49  SRSVRTTNPSVSSPIEMAETNSNQTVAETSIAELDLQRNGLTLIDFNHEQQLTSSGSETL 108

Query: 109 DPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLN 168
           DPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEES GNCKSEDHSLECDPRRSSKALRLN
Sbjct: 109 DPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESTGNCKSEDHSLECDPRRSSKALRLN 168

Query: 169 RVKHLARKMNSSAKPSAVPDESLNQTAIAGSTDL 202
           RVKHLARK+NSS KPSA  DES NQTAIAGST+L
Sbjct: 169 RVKHLARKINSSVKPSAA-DESQNQTAIAGSTNL 201

BLAST of Carg00502 vs. NCBI nr
Match: XP_004134985.2 (PREDICTED: uncharacterized protein LOC101212529 isoform X2 [Cucumis sativus] >KGN49048.1 hypothetical protein Csa_6G511630 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36
Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0

Query: 41  NYHLRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ-- 100
           NY +RRL+ R+ + +NPS S       TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ  
Sbjct: 92  NYQIRRLKYRNGKTTNPSFSG------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQES 151

Query: 101 -----MTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSL 160
                +TSS SE LDP+AEILQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SL
Sbjct: 152 LNPDSITSSSSEILDPRAEILQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSL 211

Query: 161 ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAG 198
           E D  RSS++LR  RVK LAR MNSS KPSA  + S ++T IAG
Sbjct: 212 EYDLNRSSRSLR--RVKRLARMMNSSLKPSA-DESSQHKTTIAG 245

BLAST of Carg00502 vs. NCBI nr
Match: XP_011658116.1 (PREDICTED: uncharacterized protein LOC101212529 isoform X1 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36
Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0

Query: 41  NYHLRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ-- 100
           NY +RRL+ R+ + +NPS S       TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ  
Sbjct: 92  NYQIRRLKYRNGKTTNPSFSG------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQES 151

Query: 101 -----MTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSL 160
                +TSS SE LDP+AEILQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SL
Sbjct: 152 LNPDSITSSSSEILDPRAEILQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSL 211

Query: 161 ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAG 198
           E D  RSS++LR  RVK LAR MNSS KPSA  + S ++T IAG
Sbjct: 212 EYDLNRSSRSLR--RVKRLARMMNSSLKPSA-DESSQHKTTIAG 245

BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A0A0KHQ0|A0A0A0KHQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.6e-37
Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = 0

Query: 41  NYHLRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ-- 100
           NY +RRL+ R+ + +NPS S       TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ  
Sbjct: 92  NYQIRRLKYRNGKTTNPSFSG------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQES 151

Query: 101 -----MTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSL 160
                +TSS SE LDP+AEILQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SL
Sbjct: 152 LNPDSITSSSSEILDPRAEILQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSL 211

Query: 161 ECDPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAG 198
           E D  RSS++LR  RVK LAR MNSS KPSA  + S ++T IAG
Sbjct: 212 EYDLNRSSRSLR--RVKRLARMMNSSLKPSA-DESSQHKTTIAG 245

BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A1S3B0B1|A0A1S3B0B1_CUCME (uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.1e-35
Identity = 100/163 (61.35%), Postives = 118/163 (72.39%), Query Frame = 0

Query: 44  LRRLRSRSVRASNPSVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ----- 103
           LRRL+ ++V+ +NPS S       TNS + ++ETSIAELDLQ+NGI L+ FNHEQ     
Sbjct: 44  LRRLKYQNVKTTNPSFSG------TNSFKAISETSIAELDLQQNGIMLVGFNHEQESLNP 103

Query: 104 --MTSSGSETLDPKAEILQGRVRLSHIRRLARSIGIHQMMDSME-ESNGNCKSEDHSLEC 163
             +TSS SETLDP+AEILQGRVRLSHIRRLARSIGIHQM   +  ES  NCKS+D +LE 
Sbjct: 104 DSITSSSSETLDPRAEILQGRVRLSHIRRLARSIGIHQMFSQVGLESTSNCKSKDSNLEY 163

Query: 164 DPRRSSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAGS 199
           D  R SK+LR   VK LAR MNSS KPSA  + S +QT IAGS
Sbjct: 164 DLSRPSKSLR--HVKRLARMMNSSVKPSA-NESSQHQTIIAGS 197

BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A2N9J117|A0A2N9J117_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58011 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 0

Query: 58  SVSSPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ-------MTSSGSETLDPK 117
           S+ +  E    N ++  A  S++    Q N +T ++ NH Q           G E L  K
Sbjct: 71  SIMTGCETITGNENEHQAVISVSGPSEQCNSVTHVEINHGQEKLIVECTKFGGLEALAQK 130

Query: 118 AEILQGRVRLSHIRRLARSI--------GIHQMMDSME---ESNGNCKSEDHSLECDPRR 177
           +   Q R+RLSH+R LAR++        G HQ++ ++    +   NC +   S   D  R
Sbjct: 131 SASFQRRLRLSHVRHLARTMNHSMGELTGNHQIVAAVTTKGDVTNNCSTVGDS---DSGR 190

Query: 178 SSKALRLNRVKHLARKMNSSAKPSAVPDESLNQTAIAGS 199
           S ++LRLNRVK LAR +N+SA   +V  E+  Q   +G+
Sbjct: 191 SPQSLRLNRVKRLARTLNNSA--DSVMKEATGQNDQSGT 224

BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A2I4F9V7|A0A2I4F9V7_9ROSI (uncharacterized protein LOC108996843 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996843 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 64  EMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ-------MTSSGSETLDPKAEILQG 123
           E   ++ HQ V  TS + L ++ NG+T +  N ++         S G E L  K      
Sbjct: 75  ETITSDEHQAV--TSFSGLSVKCNGVTHVGTNKDEENLTVDCKESEGLEALAYKGTNFPR 134

Query: 124 RVRLSHIRRLARSI--------GIHQMMDSM---EESNGNCKSEDHSLECDPRRSSKALR 181
           R+RLSHIR LARS+        G HQM++++    +   NC     S   D   S ++LR
Sbjct: 135 RLRLSHIRHLARSLNNSMGELGGNHQMVEAVITKRDVASNCLQVGRS---DSGISPQSLR 194

BLAST of Carg00502 vs. TrEMBL
Match: tr|A0A2I4F9T7|A0A2I4F9T7_9ROSI (uncharacterized protein LOC108996843 isoform X1 OS=Juglans regia OX=51240 GN=LOC108996843 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.2e-04
Identity = 49/135 (36.30%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 64  EMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQ-------MTSSGSETLDPKAEILQG 123
           E   ++ HQ V  TS + L ++ NG+T +  N ++         S G E L  K      
Sbjct: 75  ETITSDEHQAV--TSFSGLSVKCNGVTHVGTNKDEENLTVDCKESEGLEALAYKGTNFPR 134

Query: 124 RVRLSHIRRLARSI--------GIHQMMDSM---EESNGNCKSEDHSLECDPRRSSKALR 181
           R+RLSHIR LARS+        G HQM++++    +   NC     S   D   S ++LR
Sbjct: 135 RLRLSHIRHLARSLNNSMGELGGNHQMVEAVITKRDVASNCLQVGRS---DSGISPQSLR 194

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022949888.13.5e-8399.50uncharacterized protein LOC111453147 [Cucurbita moschata][more]
XP_023543050.12.1e-7592.86uncharacterized protein LOC111803033 [Cucurbita pepo subsp. pepo][more]
XP_022978880.18.7e-6691.56uncharacterized protein LOC111478702 [Cucurbita maxima] >XP_022978881.1 uncharac... [more]
XP_004134985.21.4e-3662.20PREDICTED: uncharacterized protein LOC101212529 isoform X2 [Cucumis sativus] >KG... [more]
XP_011658116.11.4e-3662.20PREDICTED: uncharacterized protein LOC101212529 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KHQ0|A0A0A0KHQ0_CUCSA9.6e-3762.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1[more]
tr|A0A1S3B0B1|A0A1S3B0B1_CUCME3.1e-3561.35uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=... [more]
tr|A0A2N9J117|A0A2N9J117_FAGSY1.3e-0432.08Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58011 PE=4 SV=1[more]
tr|A0A2I4F9V7|A0A2I4F9V7_9ROSI2.2e-0436.30uncharacterized protein LOC108996843 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4F9T7|A0A2I4F9T7_9ROSI2.2e-0436.30uncharacterized protein LOC108996843 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00502-RACarg00502-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..201