CmoCh03G001790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGGAATCCAACTAAGAACTAACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAAACAAGGCAACCTCTTTGCATCGCAAGGAGGGCTAGTAATCTTAGCTCAAATCGAGGATGAGTATGGAAGCGTGATGACACCTTATGGAAATGTAGGAAAAATATATATCAATTGGTGCGCTCAAATGGTCGAATCTCTTAATATTGGCGTTCCATGGATCATGTGCCAATAGAGTGATGCCCACAACTTATCTTTAA ATGCCGGGAATCCAACTAAGAACTAACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAAACAAGGCAACCTCTTTGCATCGCAAGGAGGGCTAGTAATCTTAGCTCAAATCGAGGATGAGTATGGAAGCGTGATGACACCTTATGGAAATGAAAAATATATATCAATTGGTGCGCTCAAATGGTCGAATCTCTTAATATTGGCGTTCCATGGATCATGTGCCAATAGAGTGATGCCCACAACTTATCTTTAA ATGCCGGGAATCCAACTAAGAACTAACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAAACAAGGCAACCTCTTTGCATCGCAAGGAGGGCTAGTAATCTTAGCTCAAATCGAGGATGAGTATGGAAGCGTGATGACACCTTATGGAAATGAAAAATATATATCAATTGGTGCGCTCAAATGGTCGAATCTCTTAATATTGGCGTTCCATGGATCATGTGCCAATAGAGTGATGCCCACAACTTATCTTTAA
BLAST of CmoCh03G001790 vs. Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.1e-14 Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 1
BLAST of CmoCh03G001790 vs. Swiss-Prot
Match: BGAL7_ARATH (Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13 Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of CmoCh03G001790 vs. Swiss-Prot
Match: BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13 Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 1
BLAST of CmoCh03G001790 vs. Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.0e-13 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 1
BLAST of CmoCh03G001790 vs. Swiss-Prot
Match: BGAL1_ORYSJ (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.7e-12 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TrEMBL
Match: A0A0A0LDH9_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.8e-22 Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TrEMBL
Match: A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-21 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TrEMBL
Match: A0A0A0KL41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168850 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.1e-21 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TrEMBL
Match: A0A0A0KRM6_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.1e-21 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TrEMBL
Match: A0A0A0M006_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.1e-21 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TAIR10
Match: AT2G28470.1 (AT2G28470.1 beta-galactosidase 8) HSP 1 Score: 77.0 bits (188), Expect = 6.6e-15 Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TAIR10
Match: AT5G20710.1 (AT5G20710.1 beta-galactosidase 7) HSP 1 Score: 77.0 bits (188), Expect = 6.6e-15 Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TAIR10
Match: AT1G31740.1 (AT1G31740.1 beta-galactosidase 15) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-14 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TAIR10
Match: AT2G32810.1 (AT2G32810.1 beta galactosidase 9) HSP 1 Score: 68.6 bits (166), Expect = 2.4e-12 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 1
BLAST of CmoCh03G001790 vs. TAIR10
Match: AT3G13750.1 (AT3G13750.1 beta galactosidase 1) HSP 1 Score: 66.6 bits (161), Expect = 9.0e-12 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1
BLAST of CmoCh03G001790 vs. NCBI nr
Match: gi|659118476|ref|XP_008459141.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo]) HSP 1 Score: 112.8 bits (281), Expect = 3.1e-22 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = 1
BLAST of CmoCh03G001790 vs. NCBI nr
Match: gi|778688671|ref|XP_011652808.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus]) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-22 Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1
BLAST of CmoCh03G001790 vs. NCBI nr
Match: gi|700203008|gb|KGN58141.1| (hypothetical protein Csa_3G550690 [Cucumis sativus]) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-22 Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1
BLAST of CmoCh03G001790 vs. NCBI nr
Match: gi|659093706|ref|XP_008447673.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo]) HSP 1 Score: 112.5 bits (280), Expect = 4.0e-22 Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1
BLAST of CmoCh03G001790 vs. NCBI nr
Match: gi|659129875|ref|XP_008464891.1| (PREDICTED: beta-galactosidase-like [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 6.9e-22 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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