Cp4.1LG10g11980 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g11980
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBeta-galactosidase
LocationCp4.1LG10 : 8295154 .. 8295477 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGTTTTCCACTATGGTTGCACAATATGCCAGGAATCCAACTACGAACTGACAATCAAGTCTACAAAAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAACCAAGCTAACCTCTTTGCATCACAAGGAGGACCAATAATCTTAGCTCAAATCGAGAACGAGTATGGAAACGTGATGACACCTTATGGAAATGCAGGAGGAACATACATCAATTGGTGCACTCAAATGACCAAATCTCCTAATATTGGCGTTCCATGGATCATGGGCCAATAG

mRNA sequence

ATGATGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGTTTTCCACTATGGTTGCACAATATGCCAGGAATCCAACTACGAACTGACAATCAAGTCTACAAAAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAACCAAGCTAACCTCTTTGCATCACAAGGAGGACCAATAATCTTAGCTCAAATCGAGAACGAGTATGGAAACGTGATGACACCTTATGGAAATGCAGGAGGAACATACATCAATTGGTGCACTCAAATGACCAAATCTCCTAATATTGGCGTTCCATGGATCATGGGCCAATAG

Coding sequence (CDS)

ATGATGATTGGTCCTTACGTGTGTGCCGAGTGGAACTACGGAGGTTTTCCACTATGGTTGCACAATATGCCAGGAATCCAACTACGAACTGACAATCAAGTCTACAAAAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAACCAAGCTAACCTCTTTGCATCACAAGGAGGACCAATAATCTTAGCTCAAATCGAGAACGAGTATGGAAACGTGATGACACCTTATGGAAATGCAGGAGGAACATACATCAATTGGTGCACTCAAATGACCAAATCTCCTAATATTGGCGTTCCATGGATCATGGGCCAATAG

Protein sequence

MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQGGPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ
Homology
[Close]
BLAST of Cp4.1LG10g11980 vs. Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-41
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLHNMPG++ RT N  + NEMQ FTT IV M  +  LFASQG
Sbjct: 108 LRIGPYVCAEWNYGGFPVWLHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQG 167

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNV+  YG AG  YI WC  M  S ++GVPWIM Q
Sbjct: 168 GPIILAQIENEYGNVIGSYGEAGKAYIQWCANMANSLDVGVPWIMCQ 214

[Close]
BLAST of Cp4.1LG10g11980 vs. Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.7e-41
Identity = 74/107 (69.16%), Postives = 85/107 (79.44%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLHNMP ++ RT N  + NEMQ FTTKIVNM  + +LFASQG
Sbjct: 113 LRIGPYVCAEWNYGGFPVWLHNMPDMKFRTINPGFMNEMQNFTTKIVNMMKEESLFASQG 172

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNV++ YG  G  YI+WC  M  S +IGVPWIM Q
Sbjct: 173 GPIILAQIENEYGNVISSYGAEGKAYIDWCANMANSLDIGVPWIMCQ 219

[Close]
BLAST of Cp4.1LG10g11980 vs. Swiss-Prot
Match: BGAL7_ARATH (Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 5.0e-40
Identity = 72/107 (67.29%), Postives = 83/107 (77.57%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLHNMP ++ RT N  + NEMQ FTTKIV M  +  LFASQG
Sbjct: 114 LRIGPYVCAEWNYGGFPVWLHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQG 173

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNV++ YG  G  YI+WC  M  S +IGVPW+M Q
Sbjct: 174 GPIILAQIENEYGNVISSYGAEGKAYIDWCANMANSLDIGVPWLMCQ 220

[Close]
BLAST of Cp4.1LG10g11980 vs. Swiss-Prot
Match: BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 5.2e-37
Identity = 68/107 (63.55%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLH +PGI+ RTDN+ +K EMQ FTTKIV++  Q  L+ASQG
Sbjct: 118 LRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQG 177

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIIL+QIENEYGN+ + YG A  +YI W   M  S + GVPW M Q
Sbjct: 178 GPIILSQIENEYGNIDSAYGAAAKSYIKWSASMALSLDTGVPWNMCQ 224

[Close]
BLAST of Cp4.1LG10g11980 vs. Swiss-Prot
Match: BGAL6_ORYSJ (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-36
Identity = 66/107 (61.68%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLH +PGI+ RTDN+ +K EMQ FT K+V+    A L+ASQG
Sbjct: 119 LRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNEAFKAEMQRFTEKVVDTMKGAGLYASQG 178

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIIL+QIENEYGN+ + YG AG  Y+ W   M  S + GVPW+M Q
Sbjct: 179 GPIILSQIENEYGNIDSAYGAAGKAYMRWAAGMAVSLDTGVPWVMCQ 225

[Close]
BLAST of Cp4.1LG10g11980 vs. TrEMBL
Match: A0A0A0LDH9_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.1e-53
Identity = 96/107 (89.72%), Postives = 99/107 (92.52%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHNMPGIQLRT+NQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 113 MRIGPYVCAEWNYGGFPLWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 172

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYG AG TYINWC QM +S NIG+PWIM Q
Sbjct: 173 GPIILAQIENEYGNVMTPYGEAGKTYINWCAQMAESLNIGIPWIMCQ 219

[Close]
BLAST of Cp4.1LG10g11980 vs. TrEMBL
Match: A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.0e-53
Identity = 97/107 (90.65%), Postives = 98/107 (91.59%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEM TFTTKIVNMC QANLFASQG
Sbjct: 91  MRIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMLTFTTKIVNMCKQANLFASQG 150

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYGNAG  YINWC QM +S NIGVPWIM Q
Sbjct: 151 GPIILAQIENEYGNVMTPYGNAGKAYINWCAQMAESFNIGVPWIMCQ 197

[Close]
BLAST of Cp4.1LG10g11980 vs. TrEMBL
Match: A0A0A0M006_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 7.5e-51
Identity = 95/108 (87.96%), Postives = 99/108 (91.67%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFP+WLHNMPGIQLRT+NQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTP-YGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTP YG+AG  YINWC QM +S NIGVPWIM Q
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDAGKAYINWCAQMAESLNIGVPWIMCQ 215

[Close]
BLAST of Cp4.1LG10g11980 vs. TrEMBL
Match: A0A0A0KRM6_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 7.5e-51
Identity = 95/108 (87.96%), Postives = 99/108 (91.67%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFP+WLHNMPGIQLRT+NQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 108 MRIGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 167

Query: 61  GPIILAQIENEYGNVMTP-YGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTP YG+AG  YINWC QM +S NIGVPWIM Q
Sbjct: 168 GPIILAQIENEYGNVMTPAYGDAGKAYINWCAQMAESLNIGVPWIMCQ 215

[Close]
BLAST of Cp4.1LG10g11980 vs. TrEMBL
Match: A0A0A0KL41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168850 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-49
Identity = 93/106 (87.74%), Postives = 97/106 (91.51%), Query Frame = 1 

Query: 3   IGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQGGP 62
           IGPYVCAEWNYGGFP+WLHNMPGIQLRT+NQVYKNEMQTFTTKIVNMC QANLFASQGGP
Sbjct: 44  IGPYVCAEWNYGGFPVWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGP 103

Query: 63  IILAQIENEYGNVMTP-YGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           IILAQIENEYGNVMTP YG+AG  YINWC QM +S NI VPWIM Q
Sbjct: 104 IILAQIENEYGNVMTPAYGDAGKAYINWCAQMAESLNIDVPWIMCQ 149

[Close]
BLAST of Cp4.1LG10g11980 vs. TAIR10
Match: AT1G31740.1 (AT1G31740.1 beta-galactosidase 15)

HSP 1 Score: 167.9 bits (424), Expect = 3.3e-42
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLHNMPG++ RT N  + NEMQ FTT IV M  +  LFASQG
Sbjct: 131 LRIGPYVCAEWNYGGFPVWLHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQG 190

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNV+  YG AG  YI WC  M  S ++GVPWIM Q
Sbjct: 191 GPIILAQIENEYGNVIGSYGEAGKAYIQWCANMANSLDVGVPWIMCQ 237

[Close]
BLAST of Cp4.1LG10g11980 vs. TAIR10
Match: AT5G20710.1 (AT5G20710.1 beta-galactosidase 7)

HSP 1 Score: 164.9 bits (416), Expect = 2.8e-41
Identity = 72/107 (67.29%), Postives = 83/107 (77.57%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLHNMP ++ RT N  + NEMQ FTTKIV M  +  LFASQG
Sbjct: 114 LRIGPYVCAEWNYGGFPVWLHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQG 173

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNV++ YG  G  YI+WC  M  S +IGVPW+M Q
Sbjct: 174 GPIILAQIENEYGNVISSYGAEGKAYIDWCANMANSLDIGVPWLMCQ 220

[Close]
BLAST of Cp4.1LG10g11980 vs. TAIR10
Match: AT2G28470.1 (AT2G28470.1 beta-galactosidase 8)

HSP 1 Score: 154.8 bits (390), Expect = 2.9e-38
Identity = 68/107 (63.55%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWNYGGFP+WLH +PGI+ RTDN+ +K EMQ FTTKIV++  Q  L+ASQG
Sbjct: 118 LRIGPYVCAEWNYGGFPVWLHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQG 177

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIIL+QIENEYGN+ + YG A  +YI W   M  S + GVPW M Q
Sbjct: 178 GPIILSQIENEYGNIDSAYGAAAKSYIKWSASMALSLDTGVPWNMCQ 224

[Close]
BLAST of Cp4.1LG10g11980 vs. TAIR10
Match: AT2G32810.1 (AT2G32810.1 beta galactosidase 9)

HSP 1 Score: 144.1 bits (362), Expect = 5.1e-35
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWN+GGFP+WL ++PGI+ RTDN+ +K EMQ F TKIV++  +A LF  QG
Sbjct: 124 LRIGPYVCAEWNFGGFPVWLRDIPGIEFRTDNEPFKKEMQKFVTKIVDLMREAKLFCWQG 183

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIM 106
           GPII+ QIENEYG+V   YG  G  Y+ W   M      GVPW+M
Sbjct: 184 GPIIMLQIENEYGDVEKSYGQKGKDYVKWAASMALGLGAGVPWVM 228

[Close]
BLAST of Cp4.1LG10g11980 vs. TAIR10
Match: AT3G13750.1 (AT3G13750.1 beta galactosidase 1)

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-33
Identity = 62/105 (59.05%), Postives = 73/105 (69.52%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           + IGPYVCAEWN+GGFP+WL  +PGI  RTDN  +K +MQ FTTKIVNM     LF SQG
Sbjct: 120 LRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQG 179

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIM 106
           GPIIL+QIENEYG +    G  G +Y NW  +M      GVPW+M
Sbjct: 180 GPIILSQIENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVM 224

[Close]
BLAST of Cp4.1LG10g11980 vs. NCBI nr
Match: gi|659118476|ref|XP_008459141.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 6.1e-54
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHNMPG+QLRTDNQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 112 MRIGPYVCAEWNYGGFPLWLHNMPGVQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQG 171

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYGNAG TYINWC QM +S N+GVPWIM Q
Sbjct: 172 GPIILAQIENEYGNVMTPYGNAGKTYINWCAQMAESLNVGVPWIMCQ 218

[Close]
BLAST of Cp4.1LG10g11980 vs. NCBI nr
Match: gi|659129875|ref|XP_008464891.1| (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-53
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHN+PGIQLRTDNQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 112 MRIGPYVCAEWNYGGFPLWLHNIPGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQG 171

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYGNAG TYINWC QM +S N+GVPWIM Q
Sbjct: 172 GPIILAQIENEYGNVMTPYGNAGKTYINWCAQMAESLNVGVPWIMCQ 218

[Close]
BLAST of Cp4.1LG10g11980 vs. NCBI nr
Match: gi|778688671|ref|XP_011652808.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 8.8e-53
Identity = 96/107 (89.72%), Postives = 99/107 (92.52%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHNMPGIQLRT+NQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 113 MRIGPYVCAEWNYGGFPLWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 172

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYG AG TYINWC QM +S NIG+PWIM Q
Sbjct: 173 GPIILAQIENEYGNVMTPYGEAGKTYINWCAQMAESLNIGIPWIMCQ 219

[Close]
BLAST of Cp4.1LG10g11980 vs. NCBI nr
Match: gi|700203008|gb|KGN58141.1| (hypothetical protein Csa_3G550690 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 8.8e-53
Identity = 96/107 (89.72%), Postives = 99/107 (92.52%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHNMPGIQLRT+NQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 113 MRIGPYVCAEWNYGGFPLWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQG 172

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYG AG TYINWC QM +S NIG+PWIM Q
Sbjct: 173 GPIILAQIENEYGNVMTPYGEAGKTYINWCAQMAESLNIGIPWIMCQ 219

[Close]
BLAST of Cp4.1LG10g11980 vs. NCBI nr
Match: gi|778665294|ref|XP_004135782.2| (PREDICTED: beta-galactosidase 15-like [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 8.8e-53
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 1 

Query: 1   MMIGPYVCAEWNYGGFPLWLHNMPGIQLRTDNQVYKNEMQTFTTKIVNMCNQANLFASQG 60
           M IGPYVCAEWNYGGFPLWLHN+PGIQ RTDNQVYKNEMQTFTTKIVNMC QANLFASQG
Sbjct: 123 MRIGPYVCAEWNYGGFPLWLHNLPGIQFRTDNQVYKNEMQTFTTKIVNMCKQANLFASQG 182

Query: 61  GPIILAQIENEYGNVMTPYGNAGGTYINWCTQMTKSPNIGVPWIMGQ 108
           GPIILAQIENEYGNVMTPYGNAG +YINWC QM +S NIG+PWIM Q
Sbjct: 183 GPIILAQIENEYGNVMTPYGNAGKSYINWCAQMAESLNIGIPWIMCQ 229

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g11980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BGA15_ARATH5.9e-4168.22Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1[more]
BGAL_BRAOL7.7e-4169.16Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]
BGAL7_ARATH5.0e-4067.29Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2[more]
BGAL8_ARATH5.2e-3763.55Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2[more]
BGAL6_ORYSJ2.0e-3661.68Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2[more]
BLAST of Cp4.1LG10g11980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH9_CUCSA6.1e-5389.72Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1[more]
A0A0A0LXX7_CUCSA8.0e-5390.65Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1[more]
A0A0A0M006_CUCSA7.5e-5187.96Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1[more]
A0A0A0KRM6_CUCSA7.5e-5187.96Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1[more]
A0A0A0KL41_CUCSA1.4e-4987.74Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168850 PE=4 SV=1[more]
BLAST of Cp4.1LG10g11980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31740.13.3e-4268.22 beta-galactosidase 15[more]
AT5G20710.12.8e-4167.29 beta-galactosidase 7[more]
AT2G28470.12.9e-3863.55 beta-galactosidase 8[more]
AT2G32810.15.1e-3557.14 beta galactosidase 9[more]
AT3G13750.11.3e-3359.05 beta galactosidase 1[more]
BLAST of Cp4.1LG10g11980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118476|ref|XP_008459141.1|6.1e-5490.65PREDICTED: beta-galactosidase 15-like [Cucumis melo][more]
gi|659129875|ref|XP_008464891.1|1.4e-5390.65PREDICTED: beta-galactosidase-like [Cucumis melo][more]
gi|778688671|ref|XP_011652808.1|8.8e-5389.72PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus][more]
gi|700203008|gb|KGN58141.1|8.8e-5389.72hypothetical protein Csa_3G550690 [Cucumis sativus][more]
gi|778665294|ref|XP_004135782.2|8.8e-5388.79PREDICTED: beta-galactosidase 15-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR019801Glyco_hydro_35_CS
IPR017853Glycoside_hydrolase_SF
IPR013781Glycoside hydrolase, catalytic domain
IPR001944Glycoside_Hdrlase_35
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006012 galactose metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006027 glycosaminoglycan catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0009341 beta-galactosidase complex
molecular_function GO:0004565 beta-galactosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g11980.1Cp4.1LG10g11980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001944Glycoside hydrolase, family 35PRINTSPR00742GLHYDRLASE35coord: 58..73
score: 3.1E-17coord: 1..20
score: 3.1
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 1..107
score: 2.0
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 3..105
score: 3.8
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 2..106
score: 1.48
IPR019801Glycoside hydrolase, family 35, conserved sitePROSITEPS01182GLYCOSYL_HYDROL_F35coord: 60..72
scor
NoneNo IPR availablePANTHERPTHR23421:SF80SUBFAMILY NOT NAMEDcoord: 1..107
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g11980CmoCh03G001790Cucurbita moschata (Rifu)cmocpeB605
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g11980Cucurbita pepo (Zucchini)cpecpeB079
Cp4.1LG10g11980Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG10g11980Cucumber (Gy14) v1cgycpeB0931
Cp4.1LG10g11980Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g11980Cucurbita maxima (Rimu)cmacpeB863
Cp4.1LG10g11980Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g11980Cucurbita moschata (Rifu)cmocpeB803
Cp4.1LG10g11980Wild cucumber (PI 183967)cpecpiB066
Cp4.1LG10g11980Cucumber (Chinese Long) v2cpecuB071
Cp4.1LG10g11980Bottle gourd (USVL1VR-Ls)cpelsiB055
Cp4.1LG10g11980Watermelon (Charleston Gray)cpewcgB079
Cp4.1LG10g11980Melon (DHL92) v3.5.1cpemeB072
Cp4.1LG10g11980Cucumber (Gy14) v2cgybcpeB464
Cp4.1LG10g11980Melon (DHL92) v3.6.1cpemedB087
Cp4.1LG10g11980Melon (DHL92) v3.6.1cpemedB095
Cp4.1LG10g11980Silver-seed gourdcarcpeB0398
Cp4.1LG10g11980Silver-seed gourdcarcpeB1196
Cp4.1LG10g11980Cucumber (Chinese Long) v3cpecucB0076