Cp4.1LG01g17380 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g17380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBeta-galactosidase
LocationCp4.1LG01 : 12199317 .. 12206209 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAGCAAAAAAGAAAAGAAAGACGTTTTAGAGTTCAATTGGATCAATTGGTGCACTCAAATGGCGGAATCTCTTACTGTTAGCGTTCCATAGATCATGTGCCAACTGAGTGATGCCCCACAACCTATCATTAATACATGTAATGGATTCTACTACGACAACTTTAGTCCTAATAATCCTAACGGCCCAAAAATGTTTACTGAAAATGTAACGACTCAAGCCCACCGCTAATAGATATTATACTTTTTGGGCTTTCTCTTTCGGCCTTCCTATCAAGGTTTTTAAAACGTATTTGCTAGGTTTTGTATGCGCGTTTCTTTCCCACGGCGACTATCGGTTCTGGATTTTTCTCTTCAAGGTTCTTCCAGGACTTAATGGTCTTTGGGTTAAATGTCTCCACCATGCGACGGGTCTTTGGGTTCAAACCCAAAACAAATTTCTGCATCATCTTTTCCTCAGTGTCTACTAATGACGGTACGAACGTCTTCAACATCATGAACTTCTGGTCATACTGATCTATGATGCGTTCGCCCTGAGTCAGATAATTGAACTCTTGTTGTTTCTTGACGCAGGTTTTTTTCTAGTAATATTGTTTCAAGTAGGCTTCCTTAAACTTGTCCCACGTCATGATCCCCCTCCTGGGTTAATACTACTTTTGTTATCTGCCCACCAAACTTCAGAGTCCTTTTGTAGCATATAGGTCGCGCAGACTACCTTGTGGTCGTCTAGGCATCTCATTGATTCGAAGGTGGTTTCCATAGTTGCGATCCACAATCTGAGCTACTGTGGGATCTTCCTTCGAACCAATGAAGGGACGTGGGCGTACCATTTGAAGTCCTGTAGCCAGTTCACCCCTCTGTCGGGTTGCGAACTATTGGCTTGTTGTGTGGCCACCATAGTTTGCATCATTGCCTGGAATGACTCCCACATTAATCGTGTAGTGGGATCCAATCCAGCCACTGGTGCTATCGGAGGTGGTGCAGCTTGTGGGGGAGGTGCGACTTCTAGAGAAAGTGCAGCTTGTGGAGGAGGTGCAAGTTGTGGAGGTGGTGCAGGTTGGGGAGGTGGTTCCATTTGGTGATACAACTAGTGGTGCAGGTGCACAGGGTCAGTTGTCGACCCTTCTTGGGAAGAGTTCCTTCCAGCCTCTCCTCTTCCCCTTTCTCTAGTGAGGGGTCGTCCTCTTCTTCTTCTATCTCTTATGCGTCCTTGAGCAACATAGTTTTAGAAACTAAAATAATTCTATCTAAATCTATTGTTCGCTAATAATATTATATTATAGTCTACTATATATAACATAAAAATAAATAATACTATAGCTTACAAACATGTCATATCATAGAAGCATACATTAACATAAAATTCGATATTTAAAGCCAATCACATTAAATATCATCACAAAAATGTTTGTCATTTTCTCATCCTACGTAAGGCGTACCTGACGGTGACAGAGCATCGATGATTGGACTGTGGAACATGTCAAACCTACGTCGTAGGCTAGTCTACAAGATCTATAACCTAGAACTTTGATACTAAGTCTTGGAATAACCTCCAGAAGAGAAAAACCCAGAATCGATGGTCGCCATGGAAAAGAAACGCCCATACGAATCCAGGCAAACGGATTATACAAAGTTGATCAAGAGACCCCGTTATCATGACAGGTGACCTGCTCCGCCGCCAGTGGACAGAAACCCCAAGGATACAAAGAGGGGACAGGGACGTGAAAAGCCTTTATGTCGCGATTGTGGGAAACAACACTAGGGAAAATGTATGGCAAGCTCTGGGGTATGCTTCAAGTGCGATCGTGTAGGTCACACAGCCAAATACTGCACTGGAAAGGACACGAGGAACCCAAAGGGACCACCTAGAGGCCCAGGCAGTGGCGAACACCCCATGCAAACCCGCGCACAGCCCAGGGCATATGCAATGACCAGTAAAGGTGTGGGAACGGCTGGCATCGTGGTGACAGGTACCCTTTCTATTATACTAGGACACTTTGCATTAACATTGTTTGATTATGGCTCTACACATTCTTTTGTTTATCTGTCTTTTGTTAGTCAAGTAAGGTTCACCGTAGAACCCTTATTGCATGTGTTGTCTGTTGGCGCTCCAGCGGGGTAGACCTAGTTATTGAAAATAAGGTAAAAGATGGACAAATAGTAGTAGTTGGACGAACTATCCATGTACACTTGAAAGTAGTAGATATTACAGATTTCGACGTCATATTAGGAATGAATTGACTAGCCGAAAACTGCTAGCATAGACTGCCATAAGAAAGAAGTACTATTTACGGCACCAAACAGACCTAACTTTAAATTCAAAGGAACTTGCATGGGAGCCACCCCAAAAAAGAATGTTGATGGTGGAAGCTAAATGCCTGGAGCTACAAGGGAGCTGGGCTATACTAGCCCGTGCAATAGACACAAAGGGAAAAGAGAAAATAATGGATGTGGTACCAATAGTAAACGAATTTCCAGATGTCTTCGCAGAGGACTTGCCAGGAGTCCCTCCTTCACGAGCAGTAGACTTTGGGATAGAACTTGAATCAGGAACGAGACCCATCTCCAAAGCACCATACTGCATGGCCCCAGCGGAATTAAAAGAACTTAAAATACAACTACAAGACCTATTAGGCAAAGGTTTCATTCGACCTGCGTATCCCTTTCGGGTGCACCAGTGTTGCTTGTTAAAAAGAAAGACGGTTCGATGCACCTATGCATTGACTATAGAGAACTAAACAAGAGAACAATATAGAACAAATACCCACTGCCACGCATCGAGAACCTATTCGACCAACTCCGAGAGGCTATGATATTTTCCAAAATAGATGTCTGATTAGAATACCACCAAATTAAAGTCAAAGACAAAGATGTACCGAAAATAGCATTTCAAACCAGATATGGTCACTACGAGTATCATTTGGCCTCACCAACGCTCCAACGATGTTCATGAAATTAATGAACCGTGTATTCAAGGAGTGTCTAGACACGTTTGTGATCGTGTTCGTAGAAGACATCCTAATATACTCGAAAACGGACCAAGAACAAAAAGCCCTAACCATATGGAGGGAAAACAAGTTGTATGCCAAATTTTTCAAATGTGAATTTTGGCTACGAAAAGTTTTGTTCTTAGAATACGAAGTGTCTAAAGACGAAATTTTAGTGGACCCCACTAAGATAGAAGCTATCACGAAATGGGAACACTCAACTGCGGCCATCGAGGTACGTAGTTTCTTCAAGCTCATCCAAGAGGCTGGACTTTATGTTGTCATGAGGACCTTACGTGTGTGCCAAGTGGAACTACGGAGGCTTTCCACTATAGTTGCACAATATGCTCGGAATCCAACTAAGAACTGACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAAACAAGCCAACCTCTTTGCATCACAAGGAGGGCTAGTAATCTTTAGCTCAAATCGAGGACGAGTATGGAAGCGTGATGACACCTTATGGAAATGCAGGAAAAATATATATCAATTGGTGCACTCAAATGGTCGAATCTCTTAATATTGGCGTTCCATGGATCATGTGCCAATAGAGTGATGCCCCCACAACCTATGTTTAATACATGTAATGGATTCTATTGCAACAACTTTAGTCCTAGCAATCCTAACAGCCAAAAATGTTTAGTGAAAATTGGTTGGGATGGTTCAAGAAATGGGGTGAAAAAGACCCTTACAACTGTAGAAGATGTACCCTTTTCTGTGGCAAGATTTTTTCGCTCAATATATTTCAATGAAGATGCGAAGAAAATGCTGTTAAAATTATCAAAAGTTATTTCAATTCATACCACATTTAAGAAGAATGAAGTTTCATAGTTATAAATTTTGGGTGGATTACAATTTAGAGTAATTTAGAGTTATTGTATTTCAACTTTGGGTGGATTACAATTTACAAGATATTGGGCGAAAGAGTTACTGTAATGTGCAGATGGGTGGCTTATCAAGATTGACTTCATCCGAACAGAGGAACAACTTGGAGAAATCTTCACCAAGTCTCTGGCGCGGGTAAAATTTGAGGAACTACGCTCAAAGATCGGAGTTCAAATAATAAGGTAGATATAACACATGTTTTAAGAGGAGATTGTTAGATAAAAGCGACGTGCTAGTAGTATAATTGTATAATTGTAGCTGGCCATTAGTTAGCCACTTTGTTTTAAATACTACATAGAAACATTTGTTTGAGCAAAAACAAGCTTTCCATTCTCTTGCTCTTATTTTCTTCCAAAGTTTTAGCTCCCTAGCTTTCTTCCAAACATTTCTTCTTATTTTTCTTCTTCCAAAGATTTTTTACTGCTCTCACAAGCGGTCTCAGTCAAAAGACAGCACCCACTTGATGAATAACAGGAACTTAAATCAACTCAAATGACTTTGGCAGATCGGTAACTTTAACGAAATTCTCTAACCAAGCAACATGAGAGATGTTCTGCTTTTGTACCAGCTTGGTCTATGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAACACTGCAAATGTTAATTCTCAAACATCTATATACGTGAAAGAGCAAAACTAGAAGGAAAATGCACGACTCTCCTGGACTTGGGCTTTGGATCCCATGAGAGACACTCTACCAGGAAAGGGTAGATTTAAGGCACACCTTCTTTCCGAACAAAACGGAATCATTAGTGAGACTGAAGAATGTTGAGATATGATTCAAAGTATTCAAAATGAAGATATGATTTGAAGTAGTTGAGATATGATTCAAATATTCAAATATTCAAACTACCAAGATTTTAGGAGATTTTAGGAGATTGTTAGTAGATTTGAATTTATCTAGATTTGCATGATTTACTATTTCTGGTTCAGTGTATTAGGTATAAATACTCAATTGTGTAACCCTCTAGGCATCAAGTCAGGAGACATTAATAAAGCACTGCAGCTTCTATCTATTTTATCTATTCCTATCTCTTTCACTATCCCTCTTTCCAACAATTTTGGTATCAGAGCCAAGTTCGTTCAACACGAGGGCGAGTGATTATTTTCTTTTCCAAAACAAAAATGGCAGTAGTTGGTTTTTCTTTCTTTACACCGTTGTTGCCAATCTTTAATGGTGAGAAGTATGAGTGGTGGAGCATCAAGATGAAGACCTTGCTCAGATCGCAGGAGCTATGGGACTTGGTGGAGTACGGGTTCGTTGATATATCACAACCCACAATTGAAGAAAAGGAGACACTAAGCGAAACCAAGAAAAATGATGTCAACGCTCTATTCATTATTCAGCAAGCAGTTCATGAGACTATCTTTTCACGAATTGCAGCAGCAACCACATCAAAGCAAGCATGGTCAATTCTACAGGAGGAGTTTCAGGGAGATTCAGAAGTCATAACAGTGAAATTTCAATCTTTAAGACGTAATTTTGAAACTTTGCTCATGATGAATGGCGAATCAATTGCTGATTTTTTGTCCAGAACAATGGCAATAGTCAGTCAGATGCGTACCTATGGAGAGAAAATTTCAGACGAAACAATTGTTGCAAAGGTGTTGAGAAGCTTGACTCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAACAAAGGTATACAAGTTGAGACAGACATTGTACGGGTTAAAGCAGACATACTTACGAAGGCCTTGTCAGAAGAAAAGCTCTGTACTTACATCTGCAACTTTGAATCATGGGGGAGTGTTGAGATATGATTCAAAGTATTCAAAATGAAGATATGATTTGAAGTAGTTGAGATATGATTCAAATATTCAAATATTCAAACTACCAAGATTTTAGGAGATTTTAGGAGATTGTTAGTAGATTTGAATTTATCTAGATTTGCATGATTTACTATTTCTGGTTCAGTGTATTAGGTATAAATACTCAATTGTGTAACCCTCTAGGCATCATGTCAGGAGACATTAATAAAGCACTGCAGCTTCTATCTATTTTATCTATTCCTATCTCTTTCACTATCCCTCTTTCCAACAAAGAATTACGATGCATTTTATGACACGGTGCCAACCGGAATTGATGGAGGTCCCATTTATCTAATTGGAGATGAAAATGTCACAACAGATTTGTCATCAAATTTATGGTCTTACAAGGTTGGATTAAATGGAGAAATGAAGCAACCTTACAATCTGATGTTCTCACACAGTACCAAATGGAGCGCGTTAAATGAAAAATCTACTGGAAGGTGA

mRNA sequence

TGTAGCAAAAAAGAAAAGAAAGACGTTTTAGAGTTCAATTGGATCAATTGGTGCACTCAAATGGCGGAATCTCTTACTTTGCACAATATGCTCGGAATCCAACTAAGAACTGACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAAACAAGCCAACCTCTTTGCATCACAAGGAGGGCTAGTAATCTTTAGCTCAAATCGAGGACGAGAAAAATATATATCAATTGGTGCACTCAAATGGTCGAATCTCTTAATATTGGCGTTCCATGGATCATGTGCCAATAGAGTGATGCCCCCACAACCTATGTTTAATACATGTAATGGATTCTATTGCAACAACTTTAGTCCTAGCAATCCTAACAGCCAAAAATGTTTAGTGAAAATTGGTTGGGATGGTTCAAGAAATGGGCAACATGAGAGATGTTCTGCTTTTGTACCAGCTTGGTCTATGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAACACTGCAAATGTTAATTCTCAAACATCTATATACAAGGAAAATGCACGACTCTCCTGGACTTGGGCTTTGGATCCCATGAGAGACACTCTACCAGGAAAGGATTTGTCATCAAATTTATGGTCTTACAAGGTTGGATTAAATGGAGAAATGAAGCAACCTTACAATCTGATGTTCTCACACAGTACCAAATGGAGCGCGTTAAATGAAAAATCTACTGGAAGGTGA

Coding sequence (CDS)

TGTAGCAAAAAAGAAAAGAAAGACGTTTTAGAGTTCAATTGGATCAATTGGTGCACTCAAATGGCGGAATCTCTTACTTTGCACAATATGCTCGGAATCCAACTAAGAACTGACAATCAAGTCTACAAGAATGAAATGCAAACTTTCACGACGAAAATAGTGAATATGTGTAAACAAGCCAACCTCTTTGCATCACAAGGAGGGCTAGTAATCTTTAGCTCAAATCGAGGACGAGAAAAATATATATCAATTGGTGCACTCAAATGGTCGAATCTCTTAATATTGGCGTTCCATGGATCATGTGCCAATAGAGTGATGCCCCCACAACCTATGTTTAATACATGTAATGGATTCTATTGCAACAACTTTAGTCCTAGCAATCCTAACAGCCAAAAATGTTTAGTGAAAATTGGTTGGGATGGTTCAAGAAATGGGCAACATGAGAGATGTTCTGCTTTTGTACCAGCTTGGTCTATGAGCATTCTTGATGGTTGCAACAAGGAGGTTTACAACACTGCAAATGTTAATTCTCAAACATCTATATACAAGGAAAATGCACGACTCTCCTGGACTTGGGCTTTGGATCCCATGAGAGACACTCTACCAGGAAAGGATTTGTCATCAAATTTATGGTCTTACAAGGTTGGATTAAATGGAGAAATGAAGCAACCTTACAATCTGATGTTCTCACACAGTACCAAATGGAGCGCGTTAAATGAAAAATCTACTGGAAGGTGA

Protein sequence

CSKKEKKDVLEFNWINWCTQMAESLTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLVKIGWDGSRNGQHERCSAFVPAWSMSILDGCNKEVYNTANVNSQTSIYKENARLSWTWALDPMRDTLPGKDLSSNLWSYKVGLNGEMKQPYNLMFSHSTKWSALNEKSTGR
BLAST of Cp4.1LG01g17380 vs. Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18
Identity = 59/147 (40.14%), Postives = 80/147 (54.42%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFS--SNRGREKYISI 86
           LHNM  ++ RT N  + NEMQ FTTKIVNM K+ +LFASQGG +I +   N       S 
Sbjct: 132 LHNMPDMKFRTINPGFMNEMQNFTTKIVNMMKEESLFASQGGPIILAQIENEYGNVISSY 191

Query: 87  GA-----LKW----SNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 146
           GA     + W    +N L +        +   PQPM  TCNGFYC+ + PSNP+S K   
Sbjct: 192 GAEGKAYIDWCANMANSLDIGVPWIMCQQPHAPQPMIETCNGFYCDQYKPSNPSSPKMWT 251

Query: 147 K--IGWDGSRNGQHERCSAFVPAWSMS 161
           +   GW  +  G+H   +A   A+S++
Sbjct: 252 ENWTGWFKNWGGKHPYRTAEDLAFSVA 278

BLAST of Cp4.1LG01g17380 vs. Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-18
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYISIGA 86
           LHNM G++ RT N  + NEMQ FTT IV M K+  LFASQGG +I +        + IG+
Sbjct: 127 LHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQGGPIILAQIENEYGNV-IGS 186

Query: 87  LKWSNLLILAFHGSCANRV---MP---------PQPMFNTCNGFYCNNFSPSNPNSQKCL 142
              +    + +  + AN +   +P         PQPM NTCNG+YC+NFSP+NPN+ K  
Sbjct: 187 YGEAGKAYIQWCANMANSLDVGVPWIMCQQDDAPQPMLNTCNGYYCDNFSPNNPNTPKMW 246

BLAST of Cp4.1LG01g17380 vs. Swiss-Prot
Match: BGAL8_ARATH (Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.6e-17
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYI--SI 86
           LH + GI+ RTDN+ +K EMQ FTTKIV++ KQ  L+ASQGG +I S        I  + 
Sbjct: 137 LHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAY 196

Query: 87  GA-----LKWSNLLILAFH----GSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 142
           GA     +KWS  + L+       +   +   P PM NTCNGFYC+ F+P++ N  K   
Sbjct: 197 GAAAKSYIKWSASMALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWT 256

BLAST of Cp4.1LG01g17380 vs. Swiss-Prot
Match: BGAL7_ARATH (Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.6e-17
Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFS--SNRGREKYISI 86
           LHNM  ++ RT N  + NEMQ FTTKIV M K+  LFASQGG +I +   N       S 
Sbjct: 133 LHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQGGPIILAQIENEYGNVISSY 192

Query: 87  GA-----LKW----SNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 146
           GA     + W    +N L +        +   PQPM  TCNGFYC+ + P+NP++ K   
Sbjct: 193 GAEGKAYIDWCANMANSLDIGVPWLMCQQPNAPQPMLETCNGFYCDQYEPTNPSTPKMWT 252

Query: 147 K--IGWDGSRNGQHERCSAFVPAWSMS 161
           +   GW  +  G+H   +A   A+S++
Sbjct: 253 ENWTGWFKNWGGKHPYRTAEDLAFSVA 279

BLAST of Cp4.1LG01g17380 vs. Swiss-Prot
Match: BGAL6_ORYSJ (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYI--SI 86
           LH + GI+ RTDN+ +K EMQ FT K+V+  K A L+ASQGG +I S        I  + 
Sbjct: 138 LHFVPGIKFRTDNEAFKAEMQRFTEKVVDTMKGAGLYASQGGPIILSQIENEYGNIDSAY 197

Query: 87  GA-----LKWSNLLILAFHGS----CANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 142
           GA     ++W+  + ++           +   P P+ NTCNGFYC+ F+P++ +  K   
Sbjct: 198 GAAGKAYMRWAAGMAVSLDTGVPWVMCQQSDAPDPLINTCNGFYCDQFTPNSKSKPKMWT 257

BLAST of Cp4.1LG01g17380 vs. TrEMBL
Match: A0A0A0LDH9_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.3e-25
Identity = 67/129 (51.94%), Postives = 82/129 (63.57%), Query Frame = 1

Query: 25  LTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSS---------- 84
           L LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +           
Sbjct: 130 LWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMT 189

Query: 85  --NRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQK 140
                 + YI+  A + +  L +        +   PQP+ NTCNGFYC+NF+P+NPNS K
Sbjct: 190 PYGEAGKTYINWCA-QMAESLNIGIPWIMCQQSDAPQPIINTCNGFYCDNFTPNNPNSPK 249

BLAST of Cp4.1LG01g17380 vs. TrEMBL
Match: A0A0A0KRM6_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 65/127 (51.18%), Postives = 78/127 (61.42%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYISIGA 86
           LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +        +   A
Sbjct: 127 LHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMTPA 186

Query: 87  --------LKW----SNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCL 140
                   + W    +  L +        +   PQPM NTCNGFYC+NF+P+NP S K  
Sbjct: 187 YGDAGKAYINWCAQMAESLNIGVPWIMCQQSDAPQPMINTCNGFYCDNFTPNNPKSPKMF 246

BLAST of Cp4.1LG01g17380 vs. TrEMBL
Match: A0A0A0M006_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-24
Identity = 65/127 (51.18%), Postives = 78/127 (61.42%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYISIGA 86
           LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +        +   A
Sbjct: 127 LHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMTPA 186

Query: 87  --------LKW----SNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCL 140
                   + W    +  L +        +   PQPM NTCNGFYC+NF+P+NP S K  
Sbjct: 187 YGDAGKAYINWCAQMAESLNIGVPWIMCQQSDAPQPMINTCNGFYCDNFTPNNPKSPKMF 246

BLAST of Cp4.1LG01g17380 vs. TrEMBL
Match: A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.0e-24
Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 1

Query: 25  LTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGR-----E 84
           L LHNM GIQLRTDNQVYKNEM TFTTKIVNMCKQANLFASQGG +I +           
Sbjct: 108 LWLHNMPGIQLRTDNQVYKNEMLTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMT 167

Query: 85  KYISIGA--LKWSNLLILAFH----GSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKC 140
            Y + G   + W   +  +F+         +   PQP+ NTCNGFYC++FSP+NP S K 
Sbjct: 168 PYGNAGKAYINWCAQMAESFNIGVPWIMCQQSDAPQPIINTCNGFYCDSFSPNNPKSPKM 227

BLAST of Cp4.1LG01g17380 vs. TrEMBL
Match: A0A067G2I2_CITSI (Beta-galactosidase (Fragment) OS=Citrus sinensis GN=CISIN_1g0393481mg PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22
Identity = 63/126 (50.00%), Postives = 77/126 (61.11%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGR-----EKY 86
           LHN  GIQLRTDN ++KNEMQ FTTKIVNMCK+ANLFASQGG +I +          EKY
Sbjct: 130 LHNTPGIQLRTDNDIFKNEMQVFTTKIVNMCKEANLFASQGGPIILAQIENEYGNIMEKY 189

Query: 87  ISIGA--LKWSNLLILAFHGS----CANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 142
              G   +KW   + +A + S       +   P+PM NTCNGFYC+ F P+NP S K   
Sbjct: 190 GDAGKQYIKWCANMAVAQNISEPWIMCQQSDAPEPMINTCNGFYCDQFKPNNPKSPKMWT 249

BLAST of Cp4.1LG01g17380 vs. TAIR10
Match: AT1G31740.1 (AT1G31740.1 beta-galactosidase 15)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYISIGA 86
           LHNM G++ RT N  + NEMQ FTT IV M K+  LFASQGG +I +        + IG+
Sbjct: 150 LHNMPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQGGPIILAQIENEYGNV-IGS 209

Query: 87  LKWSNLLILAFHGSCANRV---MP---------PQPMFNTCNGFYCNNFSPSNPNSQKCL 142
              +    + +  + AN +   +P         PQPM NTCNG+YC+NFSP+NPN+ K  
Sbjct: 210 YGEAGKAYIQWCANMANSLDVGVPWIMCQQDDAPQPMLNTCNGYYCDNFSPNNPNTPKMW 269

BLAST of Cp4.1LG01g17380 vs. TAIR10
Match: AT2G28470.1 (AT2G28470.1 beta-galactosidase 8)

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYI--SI 86
           LH + GI+ RTDN+ +K EMQ FTTKIV++ KQ  L+ASQGG +I S        I  + 
Sbjct: 137 LHFVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAY 196

Query: 87  GA-----LKWSNLLILAFH----GSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 142
           GA     +KWS  + L+       +   +   P PM NTCNGFYC+ F+P++ N  K   
Sbjct: 197 GAAAKSYIKWSASMALSLDTGVPWNMCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWT 256

BLAST of Cp4.1LG01g17380 vs. TAIR10
Match: AT5G20710.1 (AT5G20710.1 beta-galactosidase 7)

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 56/147 (38.10%), Postives = 78/147 (53.06%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFS--SNRGREKYISI 86
           LHNM  ++ RT N  + NEMQ FTTKIV M K+  LFASQGG +I +   N       S 
Sbjct: 133 LHNMPNMKFRTVNPSFMNEMQNFTTKIVKMMKEEKLFASQGGPIILAQIENEYGNVISSY 192

Query: 87  GA-----LKW----SNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCLV 146
           GA     + W    +N L +        +   PQPM  TCNGFYC+ + P+NP++ K   
Sbjct: 193 GAEGKAYIDWCANMANSLDIGVPWLMCQQPNAPQPMLETCNGFYCDQYEPTNPSTPKMWT 252

Query: 147 K--IGWDGSRNGQHERCSAFVPAWSMS 161
           +   GW  +  G+H   +A   A+S++
Sbjct: 253 ENWTGWFKNWGGKHPYRTAEDLAFSVA 279

BLAST of Cp4.1LG01g17380 vs. TAIR10
Match: AT5G63810.1 (AT5G63810.1 beta-galactosidase 10)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13
Identity = 51/159 (32.08%), Postives = 75/159 (47.17%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSS------------ 86
           LH + G   R DN+ +K+ M++FTT IVN+ KQ  LFA QGG +I S             
Sbjct: 137 LHYVPGTVFRADNEPWKHYMESFTTYIVNLLKQEKLFAPQGGPIILSQVENEYGYYEKDY 196

Query: 87  NRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCL 146
             G ++Y    A    +  I      C     PP  + +TCNGFYC+ F+P+ P+  K  
Sbjct: 197 GEGGKRYAQWSASMAVSQNIGVPWMMCQQWDAPP-TVISTCNGFYCDQFTPNTPDKPKIW 256

Query: 147 VK--IGWDGSRNGQHERCSAFVPAWSMSILDGCNKEVYN 172
            +   GW  +  G+     A   A+S++   G    V+N
Sbjct: 257 TENWPGWFKTFGGRDPHRPAEDVAYSVARFFGKGGSVHN 294

BLAST of Cp4.1LG01g17380 vs. TAIR10
Match: AT3G13750.1 (AT3G13750.1 beta galactosidase 1)

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-13
Identity = 48/122 (39.34%), Postives = 60/122 (49.18%), Query Frame = 1

Query: 32  GIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFS--SNRGREKYISIGA--- 91
           GI  RTDN  +K +MQ FTTKIVNM K   LF SQGG +I S   N        +GA   
Sbjct: 144 GISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGR 203

Query: 92  --LKWSNLLILAFHGSCANRVM-----PPQPMFNTCNGFYCNNFSPSNPNSQKCLVKIGW 142
               W+  + +   G+    VM      P P+ N CNGFYC+ FSP+     K   +  W
Sbjct: 204 SYTNWAAKMAVGL-GTGVPWVMCKQDDAPDPIINACNGFYCDYFSPNKAYKPKMWTE-AW 263

BLAST of Cp4.1LG01g17380 vs. NCBI nr
Match: gi|778688671|ref|XP_011652808.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 6.1e-25
Identity = 67/129 (51.94%), Postives = 82/129 (63.57%), Query Frame = 1

Query: 25  LTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSS---------- 84
           L LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +           
Sbjct: 130 LWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMT 189

Query: 85  --NRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQK 140
                 + YI+  A + +  L +        +   PQP+ NTCNGFYC+NF+P+NPNS K
Sbjct: 190 PYGEAGKTYINWCA-QMAESLNIGIPWIMCQQSDAPQPIINTCNGFYCDNFTPNNPNSPK 249

BLAST of Cp4.1LG01g17380 vs. NCBI nr
Match: gi|700203008|gb|KGN58141.1| (hypothetical protein Csa_3G550690 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 6.1e-25
Identity = 67/129 (51.94%), Postives = 82/129 (63.57%), Query Frame = 1

Query: 25  LTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSS---------- 84
           L LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +           
Sbjct: 130 LWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMT 189

Query: 85  --NRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQK 140
                 + YI+  A + +  L +        +   PQP+ NTCNGFYC+NF+P+NPNS K
Sbjct: 190 PYGEAGKTYINWCA-QMAESLNIGIPWIMCQQSDAPQPIINTCNGFYCDNFTPNNPNSPK 249

BLAST of Cp4.1LG01g17380 vs. NCBI nr
Match: gi|659093706|ref|XP_008447673.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24
Identity = 67/129 (51.94%), Postives = 82/129 (63.57%), Query Frame = 1

Query: 25  LTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSS---------- 84
           L LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +           
Sbjct: 130 LWLHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMT 189

Query: 85  --NRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQK 140
                 + YI+  A + +  L +        +   PQP+ NTCNGFYC+NF+P+NPNS K
Sbjct: 190 PYGEAGKTYINWCA-QMAESLNIDIPWIMCQQSDAPQPIINTCNGFYCDNFTPNNPNSPK 249

BLAST of Cp4.1LG01g17380 vs. NCBI nr
Match: gi|659118476|ref|XP_008459141.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24
Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = 1

Query: 25  LTLHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFS----------- 84
           L LHNM G+QLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +           
Sbjct: 129 LWLHNMPGVQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMT 188

Query: 85  --SNRGREKYISIGALKWSNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQ 140
              N G+  YI+  A    +L +      C  +   PQP+ +TCNG+YC+NF+P+NPNS 
Sbjct: 189 PYGNAGK-TYINWCAQMAESLNVGVPWIMCQQK-DAPQPIIDTCNGYYCDNFTPNNPNSP 248

BLAST of Cp4.1LG01g17380 vs. NCBI nr
Match: gi|778665392|ref|XP_011648551.1| (PREDICTED: beta-galactosidase 15-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 3.0e-24
Identity = 65/127 (51.18%), Postives = 78/127 (61.42%), Query Frame = 1

Query: 27  LHNMLGIQLRTDNQVYKNEMQTFTTKIVNMCKQANLFASQGGLVIFSSNRGREKYISIGA 86
           LHNM GIQLRT+NQVYKNEMQTFTTKIVNMCKQANLFASQGG +I +        +   A
Sbjct: 127 LHNMPGIQLRTNNQVYKNEMQTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMTPA 186

Query: 87  --------LKW----SNLLILAFHGSCANRVMPPQPMFNTCNGFYCNNFSPSNPNSQKCL 140
                   + W    +  L +        +   PQPM NTCNGFYC+NF+P+NP S K  
Sbjct: 187 YGDAGKAYINWCAQMAESLNIGVPWIMCQQSDAPQPMINTCNGFYCDNFTPNNPKSPKMF 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BGAL_BRAOL1.9e-1840.14Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]
BGA15_ARATH3.2e-1841.73Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1[more]
BGAL8_ARATH3.6e-1741.27Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2[more]
BGAL7_ARATH3.6e-1738.10Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2[more]
BGAL6_ORYSJ2.4e-1335.71Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LDH9_CUCSA4.3e-2551.94Beta-galactosidase OS=Cucumis sativus GN=Csa_3G550690 PE=3 SV=1[more]
A0A0A0KRM6_CUCSA2.1e-2451.18Beta-galactosidase OS=Cucumis sativus GN=Csa_5G169120 PE=3 SV=1[more]
A0A0A0M006_CUCSA2.1e-2451.18Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1[more]
A0A0A0LXX7_CUCSA8.0e-2451.56Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1[more]
A0A067G2I2_CITSI1.5e-2250.00Beta-galactosidase (Fragment) OS=Citrus sinensis GN=CISIN_1g0393481mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G31740.11.8e-1941.73 beta-galactosidase 15[more]
AT2G28470.12.0e-1841.27 beta-galactosidase 8[more]
AT5G20710.12.0e-1838.10 beta-galactosidase 7[more]
AT5G63810.13.3e-1332.08 beta-galactosidase 10[more]
AT3G13750.14.4e-1339.34 beta galactosidase 1[more]
Match NameE-valueIdentityDescription
gi|778688671|ref|XP_011652808.1|6.1e-2551.94PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis sativus][more]
gi|700203008|gb|KGN58141.1|6.1e-2551.94hypothetical protein Csa_3G550690 [Cucumis sativus][more]
gi|659093706|ref|XP_008447673.1|1.0e-2451.94PREDICTED: beta-galactosidase 15-like [Cucumis melo][more]
gi|659118476|ref|XP_008459141.1|1.8e-2452.31PREDICTED: beta-galactosidase 15-like [Cucumis melo][more]
gi|778665392|ref|XP_011648551.1|3.0e-2451.18PREDICTED: beta-galactosidase 15-like [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR013781Glycoside hydrolase, catalytic domain
IPR001944Glycoside_Hdrlase_35
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006027 glycosaminoglycan catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009341 beta-galactosidase complex
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0004565 beta-galactosidase activity
molecular_function GO:0030246 carbohydrate binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17380.1Cp4.1LG01g17380.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 27..202
score: 1.2
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 31..73
score: 3.
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 17..127
score: 1.6
NoneNo IPR availablePANTHERPTHR23421:SF80SUBFAMILY NOT NAMEDcoord: 27..202
score: 1.2

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17380CmoCh03G001790Cucurbita moschata (Rifu)cmocpeB617
The following gene(s) are paralogous to this gene:

None