CmoCh03G000170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh03G000170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description5'-3' exonuclease family protein
LocationCmo_Chr03 : 200306 .. 206081 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTAAACAAGGTTATATATCCGAATCGGGCAGCGGTCGAGGAGGCGCTTCGGTGGTTCTCATGGCCTGCCACCATCTTCACACTGCGACTGCTAGTGCGTCGCACATTTGCAGAAATTTTCTGGGATACATTTTCACCTCCAAATTTGCTTCTCCTCTTCGTTTCTCTTCTTCTTCTTCTTCTTTGAGGATACAGTCTCCTGGTCACCATTGTTTTCCCTCTTTCTCCGTTCTGCTACCCCCGAAGGTAACTCAGTTTCTGCTTATTGGTACTTATTGTTCTGAATTGATTCTAGCATATTTACCGAGAAATTTAGTTGAAAAAAGTAGGAGGCTCATTAATGACGGAGTGTTATTGTGTCGATGTGAAATGGGCGAGATATATTATGGTAGCAAGGTGTAATTCGATTAATCAAAGAGCAGAATGTGGTTGATGGCTCTTATTGCAATAGTTTTTCTTGTCATCTCGACATGAGAAATGGGTACTATTTAGATCTTAGTTGTGATCATGGCGTCTAATTTTAGCGTTTGGTTAAATTCAAAGCAATATACAACTTTTTGCCTCTGTTTTCTGCTGCAGTTTTGACTTCTTCTAAGGATTTTTCTCGGTTTCTCAGGGTTACTGTAGTTCATCTAGAAGTGTAAATGCTGCGATTAACGTAGATAGCAATGCAACTTATCATGGTAGTCCGGCATCTTCTATTAGCCAGCAAATGCTGCAAGTCCAAGATTCATTATCGAATTCACCCACATGCAAAGAAGAAACTGAAATTGATAGACCTTCGGATGCGAGGGTCATGCTCATTGATGGCACATCAATCATTTATAGAGCATACCACAAGCTTTTGGGTATGTTAGATTTGTCATCAGAATGTTTTAGTTTGACTTAGTTTGTTATCCTAACTTATATTTTCAATCCGTATTTCCACTGGAGATGGTTTATGTGCATAGAGGATAATTGATAGCAGAAAAGTGGCACACATAAACCCGTTGGTAAAGAAGTAGACTTTAAATTCTTAACATTTTTATTCTTTAATAAGAAACGCGGACAAACTTCATTAATAGAGAAAAAGATATACAAAAATGGAGACGAGATATCCCCAAATGCCAAGGGGATTACAAAAAGGATTTCCAATTAGCATTAATTTATATCAAATTAGAACTACAAACATGAGGGAGCAAAGAACGCCATTTTGGTGAAAACAATCTAACTTGCTCCCTACATTCATCACGAGAGGATTCACTGTCTTGAAAAGTCCTCTTGTTCCTTTCATACTAAAGTCTCCGTAAAACCACTACCACTGAATTGAACCACAACGCTCTAGCTTTTCCCCCAAAAAGAAGTCTCATAAATGAGCTGAAAAAAAGCCCCCGAACACCCCTTGGGGAGCACCCAACTTCAGTTAAAACTTAAAAAAGACTACACCAACCAAAAGCAATATACGTTTTTGCTATATTTACTTCTTTGATTTATTTGTTTGTTTGGATTTCTGTTTTGGAGCAGCAAAGCTGCATCATGGCCATTTATCACATGCGGATGGCAATGGAGATTGGGTGCTAACAATATTTACTGCCATGTCACTTGTAAGTAACATTCTTGTTAGGTTCTTGTTTTCAAATGTTATTTTACCTGTCCTTTTTCCAACAATGATATACATTCTACTGATAGTGCCTCAAACCCTAATGCTATTCTAAATGTTCTCCTCATCTTTGTTGTTTTTTTGCCATGAAGTAATTTCTGTTAAAATATTACAATAAAATATTGGAATATCAATTTTCAGCTTGTTGGGTATTGGCATAATGCATATGCCGTGTTTGACTAGCCATGGGAACAAAAGAGAAACATATGAGGGATCATCAACATGTAGGAGCTCGGGCCTATCCAAATCATCCTCAATAATTATATCATAGGGTGCCTCTATGGTATGAAAGGGTGGTGGGTCGAGCTCGGGTTTAAAAGTTTTGGGGTAGTGTCCGTGATAACTAGTGAGAAAGACGCTGTATTAGAGGGAAGAGGGGGAGGCTATTCAAAGAAGGTGGATACGTATGGTAGTGAGTCAATTGGAGAAAGGTGATGTCGTGGGGAGCCTTCATCAAATGAGTGCAAGGGGATGATAATATGTTTTCTTAGTCTAAAAGAGGTTTATCGGTGGCTGTCGAGAACTGATAAAGATGATGAAGGAAAAAGAAGTGATGAGGTGGGTTACAATTCCCTTCCTAGGCCCGTTTGACATTGTCTTTCGGTTTCCAGTTCATTTCCTCTAACCTTACCATCTCTTCAATCTTACATTTCAACAAGACACTTGTTAGGCCTACCATCATTAGGCAATACTTTAGAAGCGGTAGAAAAGGGAATATACCCTCATCAAGTTAGTATATACGTTAGCTTTATGTTATTTTTGCAGTTTGCTTTTGTGCATTGGGAGGAGGGAGAGTTTATCAGCCCTCTCGAGTAGGCTACGGTATTTTGTATTGCCTTCAAGCTTGACTTCTTTTATTTATCAATACAAGTAAGGTGAGACCTTACAACACGCTCCTCTCTTAACCCCTTAGTCTAAGAACCCTCCTTGTCTATCCCTTCCAACAACTTGTTCCTCTCCAAAAGTTCTTGCTTTTTTATCCATATATCTCTAAAGGCCTTTTGTTCCAACCTTTCTAAAGCTTCCTTTAGTGAGCGGAGTTTTCCCATGAATTTGAAACCTTCCCACTTTCAGGAACATTTGTTGGCCACCAAGAAACTTAAAAAGGAGTGATAGGAGATCAACATATTTTCGTACCTTAGAGGACAGGGTCCCTACTTTGGCTCCCATTGATCCAGAGAAATCGGCCAATGACTCGATGTGTCCCTGGGACCTAGAGATCTTTTGGCACCAAAGAAAGAATCCATCCAAACTCTAAATAACAAGGCTCTGGACCACCCTCAAAAGACAGTTCTATTTTCTCCGAAGTGCAACTATTTCCTTCCGTAGATTTCATCCTTCCTTCACCAATTTGACTAAAGAGGGTAGCTCCATAGATGTCCTATGTTGTTTGACCCTTCGAGGAACTTGAGATTTACTCAAAAGAATTGTAGCAAGTGTCATAAGAAATCTTCCAACCCTTGCACGCAATACTTTTGGGGCACCCATCAAGGGGTTCAAAAGCAATCATACATTTGCCTCTTCGATAACTCATGTTAGACATTTGAACAATTATCTATTCGAAGAACTTCTTTGCTTTTGATCTCACGATGATGAAAGAAAAAAATCGCTTACCCACATGAATATCCCCAAATGAACATTCACATTTGAAACTTTTGATATGAACCAAGACATCTCAATCATGCAGTATATACTAAAAGGAAGATGTGAAAAAAATGATCAAATTACCACAAGATAATCAAGTTGCAATTCATGACATATTAAAGAAGAATCAAGTTTCAATTGTTCTTGTATGATTACAAATTTTGGGTGGATGATAATTAAGAGTTATGGTGTTTTATTAATATATTTTAAGGCACTTTATTTACTTTAAGGTTACATTTATATAGTGGCTAATTATGGTCATAAAGTATACATCAATAAGGTTGTTAGATCAAATTCTCAAGAGTTGCAATCATTTGAAATGAAATCAAATTGATTTGGGGGTTTCTGCATTTGTGAAATAAAGCTTCGCATATCCAGGCGCCTTATGAGGGTTCTTAGATTCAATTGACTAGAGTTTCCATATCATTTGGTATCAAAGCTTTAGGCTAAGATTAAATATATGTTTCATTTGCGTTTCTTATCAATTTGGTTTTTATTTATTTTTATTCTTTTAGCCCATAATCGATTTAGAGTTTAAAAACTAATCTAGAATGAGAGCTTCATTTATGTAAATAAGTTGAAACAGAGTGCCCTAACATTTCTTGAGTGTATACATGTGAGAGAGTGCTGTGAGGTCTTTTGTATTTTCTGAATTTAATTTTGCAACGAAGTTTCTCAAAGAGATTTGAGGACAAATCCTCTTGAAGAAGTGAACAATGATATGAACCAATGCATCTCAATTATGCAATAGCAATATGTACTTCAAGGAAGATGTTAAAAAAATGTTGTTCAAATTATTACAAGATAAAATCAAGTTGCAATTCATGACACATTAAAGAAGAATCAAGCTTTAATTATTCTTGTATGGTTACAAATTTTGGGTGGATGATAAATTAGAGTTATGATATTTTATTAATACATTTTAAGACACTTCATTTACCTTAATGTTACATTTACATAGTGGCTAATTATGGTCATAAAGTATACATGGTGGCTAATTATGGTCATAAAGTATGAATGTTACAACTCTTGAAATGCCTCATGGAAGGTGAATGGTTTTATTTTGAGACTATATGACGCCATGTATCTTGTCTTTGTAAAGTAGACTTGGAAAATGTAATAAAAATAGCATTTGTGTTTCTTTTAGCCAAAAGCTAAGTTTCTTTGTAATTTTATGTAGTTTATGTTGAATATTTAGAATCATTCAAGCTTGACATGATCAATCTTGCTTGTGGAGTAATTCAAATCTCAAATAAGTGTTCTTGCCTTGAGATATTCGATCAACAAGGTAATTTGGATCTTACTTTCCCTTGGAGTGGTTCTTGGATATTTAGATCAAAAAGGTATTACTCTTCAATAAGGTTGTTAGATCAAATTCCCAAGAATTGCAATCTTTTGGAATGAAATCAAATTGATTTGGGTGTTTTTGCATCTGTGAATTAAGGGTTTGGATATCCAGGCACCTTACGAGGGTTCTTAGACTCAACTAGCTAGGGTTTCCATATCATACAATATTGTTCAATTAGCACCCTCGTCAATTCATCTTAGAGGTTGAACACATCTCTTCCTTTCAATCTTCACTGAACATGTATACACCTCACCAGCCCTAACCTCTTCCCGCTGGCTCTCATCCTTCAGTCCACTAACACATTATGAAAGAGATGAGGAGAAGAAAGAGAGAGAGTGTGTGCATGTGTGCGCGCGTGTCAATCCAAAAGTGTTTTCAACCCATGGTTATATTGACAAAAGTCTTTTGTAATTATAGTGTAATTTTACATCCTTCACTTGTGCTTCTCAATGTCTTGCTGAAACATTTTCTGTTTCTAAGCAAAAAAAGACGGGTGGTTTTACAAATTTTGAAAGATGGAGATATTTCTTGTGATAATTGATATATCTATTATATATCTTTTCTGCAAGAATTTGTGATTTTTCTGCAGGTAAAGTTGAAGTTTTCTGTTTAGTTTAGTGGTTCATGTGCTTACTCATTATTATTATTCTCTTGCAGATTGTTGATGTTCTGGAGTTTATGCCTTCTCATGTGGCGGTAGCTCTTCTTTTTCCCTCACTGCTCTCTTTAATTATGTTATCTGCAAATATTAACCAATTAAGATTCTTTAAATATAAGTTTTTTGGTATTTGAAAATTGAGTTCGATTTTCATTTCATTCATAATTTTTTTTAAAATTTTGTTTCATCAATCCTTCATTTTTTTTTTTACTTCTAACTATCTGTTAGCTTCTTTGGCTAAAAATGAAGTGATTTTTTCTAAAATTTTCTTAGGATGATGTGACAATATTTAACCAAAACTCCAGAATTTTTTATGTGGAAAAAAATATATAAAAATATGCTCTCCCGTACGTCATCCGAACATCCACTCTACCCGCACCCGCACCGTCGGATTCTATTGGTTTCCTTTGACTCTAGGCCTCTACCTCTCCCACTCTGACTTCATATCGGATTTGTTTTTTTTTTTTCTTTCCAGATTTGGGGTTGA

mRNA sequence

CGTAAACAAGGTTATATATCCGAATCGGGCAGCGGTCGAGGAGGCGCTTCGGTGGTTCTCATGGCCTGCCACCATCTTCACACTGCGACTGCTAGTGCGTCGCACATTTGCAGAAATTTTCTGGGATACATTTTCACCTCCAAATTTGCTTCTCCTCTTCGTTTCTCTTCTTCTTCTTCTTCTTTGAGGATACAGTCTCCTGGTCACCATTGTTTTCCCTCTTTCTCCGTTCTGCTACCCCCGAAGGGTTACTGTAGTTCATCTAGAAGTGTAAATGCTGCGATTAACGTAGATAGCAATGCAACTTATCATGGTAGTCCGGCATCTTCTATTAGCCAGCAAATGCTGCAAGTCCAAGATTCATTATCGAATTCACCCACATGCAAAGAAGAAACTGAAATTGATAGACCTTCGGATGCGAGGGTCATGCTCATTGATGGCACATCAATCATTTATAGAGCATACCACAAGCTTTTGGCAAAGCTGCATCATGGCCATTTATCACATGCGGATGGCAATGGAGATTGGGTGCTAACAATATTTACTGCCATGTCACTTATTGTTGATGTTCTGGAGTTTATGCCTTCTCATGTGGCGATTTGGGGTTGA

Coding sequence (CDS)

ATGGCCTGCCACCATCTTCACACTGCGACTGCTAGTGCGTCGCACATTTGCAGAAATTTTCTGGGATACATTTTCACCTCCAAATTTGCTTCTCCTCTTCGTTTCTCTTCTTCTTCTTCTTCTTTGAGGATACAGTCTCCTGGTCACCATTGTTTTCCCTCTTTCTCCGTTCTGCTACCCCCGAAGGGTTACTGTAGTTCATCTAGAAGTGTAAATGCTGCGATTAACGTAGATAGCAATGCAACTTATCATGGTAGTCCGGCATCTTCTATTAGCCAGCAAATGCTGCAAGTCCAAGATTCATTATCGAATTCACCCACATGCAAAGAAGAAACTGAAATTGATAGACCTTCGGATGCGAGGGTCATGCTCATTGATGGCACATCAATCATTTATAGAGCATACCACAAGCTTTTGGCAAAGCTGCATCATGGCCATTTATCACATGCGGATGGCAATGGAGATTGGGTGCTAACAATATTTACTGCCATGTCACTTATTGTTGATGTTCTGGAGTTTATGCCTTCTCATGTGGCGATTTGGGGTTGA
Homology
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BLAST of CmoCh03G000170 vs. TrEMBL
Match: A0A0A0KYZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G442580 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.7e-60
Identity = 123/171 (71.93%), Postives = 141/171 (82.46%), Query Frame = 1 

Query: 1   MACHHLHTATASASHICRNFLGYIFTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLP 60
           MA HHLHTATASASHICRNFLG+IFTSKF  P RFS+SSS +       H FPSFS+LL 
Sbjct: 96  MASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRI-------HSFPSFSLLLS 155

Query: 61  PKGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDA 120
           PKGYCSSS S+N+A  +D+  TYHGS AS+  Q M+Q QDSLSN  T KE+T ID P+DA
Sbjct: 156 PKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDTGIDNPADA 215

Query: 121 RVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVL 172
           RVMLIDGTSII+RAY+KLLAKLHHGHLSHADGNGDWVLTIFTA+SL+ ++L
Sbjct: 216 RVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLVSNIL 259

[Close]
BLAST of CmoCh03G000170 vs. TrEMBL
Match: A0A061EQX7_THECC (5\'-3\' exonuclease family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_019883 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-29
Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = 1 

Query: 52  FPSFSVLLPP-----KGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSP 111
           F  F V+ PP     KGYCS S ++N       +AT HG+   S  ++ L  Q++  ++ 
Sbjct: 38  FKKFYVIRPPPCQTIKGYCSLSYTLNTLPGA-RHATSHGNAVISSKKEQLLHQEAALDTS 97

Query: 112 TCKEETEIDRPSDARVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSL 171
             +E       S+ RVMLIDGTS+IYRAY+KLLAKLHHG+LSHADGNGDWVLTIFTA+SL
Sbjct: 98  NLQERVVNANYSNNRVMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFTALSL 157

Query: 172 IVDVLEFMPSHVAI 181
           I+DVLEF+PSHVA+
Sbjct: 158 IIDVLEFVPSHVAV 170

[Close]
BLAST of CmoCh03G000170 vs. TrEMBL
Match: A0A061EJA7_THECC (5\'-3\' exonuclease family protein isoform 1 OS=Theobroma cacao GN=TCM_019883 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-29
Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = 1 

Query: 52  FPSFSVLLPP-----KGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSP 111
           F  F V+ PP     KGYCS S ++N       +AT HG+   S  ++ L  Q++  ++ 
Sbjct: 38  FKKFYVIRPPPCQTIKGYCSLSYTLNTLPGA-RHATSHGNAVISSKKEQLLHQEAALDTS 97

Query: 112 TCKEETEIDRPSDARVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSL 171
             +E       S+ RVMLIDGTS+IYRAY+KLLAKLHHG+LSHADGNGDWVLTIFTA+SL
Sbjct: 98  NLQERVVNANYSNNRVMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFTALSL 157

Query: 172 IVDVLEFMPSHVAI 181
           I+DVLEF+PSHVA+
Sbjct: 158 IIDVLEFVPSHVAV 170

[Close]
BLAST of CmoCh03G000170 vs. TrEMBL
Match: A0A067D575_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030072mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 77/157 (49.04%), Postives = 103/157 (65.61%), Query Frame = 1 

Query: 25  FTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLPPKGYCSSSRSVNAAINVDSNATYH 84
           F  KF+ P R  ++  +++            S     KG C  S +++  +     A +H
Sbjct: 21  FRKKFSKPQRTGNTLFNIK-----RFDLARLSSSQSTKGSCCLSINLSTNVRGVGRANFH 80

Query: 85  GSPASSISQQMLQVQDSLSNSPTCKEETEID-RPSDARVMLIDGTSIIYRAYHKLLAKLH 144
            S  +SIS Q L V+   +  P   EE+ ++ +PS+ RVMLIDGTSIIYRAY+K+LAKLH
Sbjct: 81  -SIVTSISDQTLSVE---ALDPVKFEESAVNPKPSNGRVMLIDGTSIIYRAYYKILAKLH 140

Query: 145 HGHLSHADGNGDWVLTIFTAMSLIVDVLEFMPSHVAI 181
           HGHLSHADGNGDWVLTIF+A+SLI+DVLEF+PSHVA+
Sbjct: 141 HGHLSHADGNGDWVLTIFSALSLIIDVLEFIPSHVAV 168

[Close]
BLAST of CmoCh03G000170 vs. TrEMBL
Match: W9RHS6_9ROSA (DNA polymerase I OS=Morus notabilis GN=L484_018134 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.8e-27
Identity = 78/175 (44.57%), Postives = 107/175 (61.14%), Query Frame = 1 

Query: 8   TATASASHICRNFLGYIFTSKFASPLRFSSSSSSLR--IQSPGHHCFPSFSVLLPPKGYC 67
           ++++S+S  C     +     F+S   FS+S       +  P     P+ S+    +GY 
Sbjct: 7   SSSSSSSSSCLQLCFHSIRRLFSSSRSFSTSPRIFYSFLNKPPLLLHPALSLSRKFQGYY 66

Query: 68  SSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDARVMLI 127
             S  +N+ +       Y    A+S ++      D+L +S   +E    D PSD R+MLI
Sbjct: 67  VESNGLNSVL---PGVVYGERNATSYAKATFLHHDALLSS---EERAVNDNPSDGRLMLI 126

Query: 128 DGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVLEFMPSHVAI 181
           DGTSIIYRAY+KLLAKLHHG+LSHADGNGDWVLT+FTA+SLI+DVLEF+PSHVA+
Sbjct: 127 DGTSIIYRAYYKLLAKLHHGYLSHADGNGDWVLTVFTALSLIIDVLEFVPSHVAV 175

[Close]
BLAST of CmoCh03G000170 vs. TAIR10
Match: AT3G52050.3 (AT3G52050.3 5'-3' exonuclease family protein)

HSP 1 Score: 114.4 bits (285), Expect = 7.4e-26
Identity = 70/143 (48.95%), Postives = 92/143 (64.34%), Query Frame = 1 

Query: 45  QSPGHHCFPSFSVLLPP-----KGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQ 104
           +S G+ C  + S++ P      K YCSS      A++  SN    GS  +SIS+    V 
Sbjct: 43  RSVGNLCNRNCSLISPSLARSAKYYCSS-----VAVSEFSNEAASGSTLTSISED---VT 102

Query: 105 DSLSNSPTCKEE--TEIDRPSDARVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWV 164
                 P   EE        S+ RVMLIDGTSIIYRAY+KLLA+L+HGHL+HADGN DWV
Sbjct: 103 PQSIKYPFKSEERVASTAASSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWV 162

Query: 165 LTIFTAMSLIVDVLEFMPSHVAI 181
           LTIF+++SL++DVL+F+PSHVA+
Sbjct: 163 LTIFSSLSLLIDVLKFLPSHVAV 177

[Close]
BLAST of CmoCh03G000170 vs. NCBI nr
Match: gi|449453197|ref|XP_004144345.1| (PREDICTED: uncharacterized protein LOC101222649 isoform X1 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-66
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 1 

Query: 1   MACHHLHTATASASHICRNFLGYIFTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLP 60
           MA HHLHTATASASHICRNFLG+IFTSKF  P RFS+SSS +       H FPSFS+LL 
Sbjct: 19  MASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRI-------HSFPSFSLLLS 78

Query: 61  PKGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDA 120
           PKGYCSSS S+N+A  +D+  TYHGS AS+  Q M+Q QDSLSN  T KE+T ID P+DA
Sbjct: 79  PKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDTGIDNPADA 138

Query: 121 RVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVLEFMPSHVAI 180
           RVMLIDGTSII+RAY+KLLAKLHHGHLSHADGNGDWVLTIFTA+SLIVDVLE MPSHVA+
Sbjct: 139 RVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEIMPSHVAV 191

[Close]
BLAST of CmoCh03G000170 vs. NCBI nr
Match: gi|778694790|ref|XP_011653865.1| (PREDICTED: uncharacterized protein LOC101222649 isoform X2 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-66
Identity = 134/180 (74.44%), Postives = 150/180 (83.33%), Query Frame = 1 

Query: 1   MACHHLHTATASASHICRNFLGYIFTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLP 60
           MA HHLHTATASASHICRNFLG+IFTSKF  P RFS+SSS +       H FPSFS+LL 
Sbjct: 19  MASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRI-------HSFPSFSLLLS 78

Query: 61  PKGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDA 120
           PKGYCSSS S+N+A  +D+  TYHGS AS+  Q M+Q QDSLSN  T KE+T ID P+DA
Sbjct: 79  PKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDTGIDNPADA 138

Query: 121 RVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVLEFMPSHVAI 180
           RVMLIDGTSII+RAY+KLLAKLHHGHLSHADGNGDWVLTIFTA+SLIVDVLE MPSHVA+
Sbjct: 139 RVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEIMPSHVAV 191

[Close]
BLAST of CmoCh03G000170 vs. NCBI nr
Match: gi|659069411|ref|XP_008449676.1| (PREDICTED: uncharacterized protein LOC103491482 isoform X1 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.4e-65
Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 1   MACHHLHTATASASHICRNFLGYIFTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLP 60
           MA HHLHTATASASHICRNFLG++FTSKF  P RFS+SSS +       H FPS S+LL 
Sbjct: 19  MASHHLHTATASASHICRNFLGFVFTSKFPVPFRFSTSSSRI-------HSFPS-SLLLS 78

Query: 61  PKGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDA 120
           PKGYCSSS S+N++  +D+ ATYHGS AS+  Q M+Q QDSLSNS T KE+T ID P+DA
Sbjct: 79  PKGYCSSSGSINSSNIIDTIATYHGSSASTRRQSMVQFQDSLSNSLTFKEDTGIDNPADA 138

Query: 121 RVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVLEFMPSHVAI 180
           RVMLIDGTSII+RAY+KLLAKLHHGHLSHADGNGDWVLTIFTA+SLIVDVLEFMPSHVA+
Sbjct: 139 RVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEFMPSHVAV 190

[Close]
BLAST of CmoCh03G000170 vs. NCBI nr
Match: gi|659069413|ref|XP_008449686.1| (PREDICTED: uncharacterized protein LOC103491482 isoform X2 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.4e-65
Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 1   MACHHLHTATASASHICRNFLGYIFTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLP 60
           MA HHLHTATASASHICRNFLG++FTSKF  P RFS+SSS +       H FPS S+LL 
Sbjct: 19  MASHHLHTATASASHICRNFLGFVFTSKFPVPFRFSTSSSRI-------HSFPS-SLLLS 78

Query: 61  PKGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDA 120
           PKGYCSSS S+N++  +D+ ATYHGS AS+  Q M+Q QDSLSNS T KE+T ID P+DA
Sbjct: 79  PKGYCSSSGSINSSNIIDTIATYHGSSASTRRQSMVQFQDSLSNSLTFKEDTGIDNPADA 138

Query: 121 RVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVLEFMPSHVAI 180
           RVMLIDGTSII+RAY+KLLAKLHHGHLSHADGNGDWVLTIFTA+SLIVDVLEFMPSHVA+
Sbjct: 139 RVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEFMPSHVAV 190

[Close]
BLAST of CmoCh03G000170 vs. NCBI nr
Match: gi|700199585|gb|KGN54743.1| (hypothetical protein Csa_4G442580 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 9.7e-60
Identity = 123/171 (71.93%), Postives = 141/171 (82.46%), Query Frame = 1 

Query: 1   MACHHLHTATASASHICRNFLGYIFTSKFASPLRFSSSSSSLRIQSPGHHCFPSFSVLLP 60
           MA HHLHTATASASHICRNFLG+IFTSKF  P RFS+SSS +       H FPSFS+LL 
Sbjct: 96  MASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRI-------HSFPSFSLLLS 155

Query: 61  PKGYCSSSRSVNAAINVDSNATYHGSPASSISQQMLQVQDSLSNSPTCKEETEIDRPSDA 120
           PKGYCSSS S+N+A  +D+  TYHGS AS+  Q M+Q QDSLSN  T KE+T ID P+DA
Sbjct: 156 PKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDTGIDNPADA 215

Query: 121 RVMLIDGTSIIYRAYHKLLAKLHHGHLSHADGNGDWVLTIFTAMSLIVDVL 172
           RVMLIDGTSII+RAY+KLLAKLHHGHLSHADGNGDWVLTIFTA+SL+ ++L
Sbjct: 216 RVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLVSNIL 259

The following BLAST results are available for this feature:
BLAST of CmoCh03G000170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh03G000170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYZ2_CUCSA6.7e-6071.93Uncharacterized protein OS=Cucumis sativus GN=Csa_4G442580 PE=4 SV=1[more]
A0A061EQX7_THECC2.8e-2955.225\'-3\' exonuclease family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TC... [more]
A0A061EJA7_THECC2.8e-2955.225\'-3\' exonuclease family protein isoform 1 OS=Theobroma cacao GN=TCM_019883 PE... [more]
A0A067D575_CITSI2.0e-2749.04Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030072mg PE=4 SV=1[more]
W9RHS6_9ROSA5.8e-2744.57DNA polymerase I OS=Morus notabilis GN=L484_018134 PE=4 SV=1[more]
BLAST of CmoCh03G000170 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G52050.37.4e-2648.95 5'-3' exonuclease family protein[more]
BLAST of CmoCh03G000170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453197|ref|XP_004144345.1|5.3e-6674.44PREDICTED: uncharacterized protein LOC101222649 isoform X1 [Cucumis sativus][more]
gi|778694790|ref|XP_011653865.1|5.3e-6674.44PREDICTED: uncharacterized protein LOC101222649 isoform X2 [Cucumis sativus][more]
gi|659069411|ref|XP_008449676.1|3.4e-6574.44PREDICTED: uncharacterized protein LOC103491482 isoform X1 [Cucumis melo][more]
gi|659069413|ref|XP_008449686.1|3.4e-6574.44PREDICTED: uncharacterized protein LOC103491482 isoform X2 [Cucumis melo][more]
gi|700199585|gb|KGN54743.1|9.7e-6071.93hypothetical protein Csa_4G442580 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0022900 electron transport chain
cellular_component GO:0031361 integral component of thylakoid membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0042575 DNA polymerase complex
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G000170.1CmoCh03G000170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10133DNA POLYMERASE Icoord: 90..180
score: 1.0
NoneNo IPR availablePANTHERPTHR10133:SF225'-3' EXONUCLEASE FAMILY PROTEINcoord: 90..180
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh03G000170Cucsa.170000Cucumber (Gy14) v1cgycmoB0484
CmoCh03G000170CmaCh03G000030Cucurbita maxima (Rimu)cmacmoB658
CmoCh03G000170Csa4G442580Cucumber (Chinese Long) v2cmocuB660
CmoCh03G000170ClCG04G002830Watermelon (Charleston Gray)cmowcgB586
CmoCh03G000170CSPI04G19580Wild cucumber (PI 183967)cmocpiB673
CmoCh03G000170Cp4.1LG10g12240Cucurbita pepo (Zucchini)cmocpeB606
CmoCh03G000170MELO3C033213.2Melon (DHL92) v3.6.1cmomedB698
CmoCh03G000170CsaV3_4G029900Cucumber (Chinese Long) v3cmocucB0784
CmoCh03G000170Cla97C04G070240Watermelon (97103) v2cmowmbB660
CmoCh03G000170CsGy4G018430Cucumber (Gy14) v2cgybcmoB511
CmoCh03G000170Carg26106Silver-seed gourdcarcmoB0702
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh03G000170Wax gourdcmowgoB0789
CmoCh03G000170Wax gourdcmowgoB0801
CmoCh03G000170Cucurbita moschata (Rifu)cmocmoB461
CmoCh03G000170Cucurbita maxima (Rimu)cmacmoB654
CmoCh03G000170Cucurbita maxima (Rimu)cmacmoB863
CmoCh03G000170Wild cucumber (PI 183967)cmocpiB667
CmoCh03G000170Cucumber (Chinese Long) v2cmocuB663
CmoCh03G000170Melon (DHL92) v3.5.1cmomeB611
CmoCh03G000170Melon (DHL92) v3.5.1cmomeB612
CmoCh03G000170Cucurbita pepo (Zucchini)cmocpeB604
CmoCh03G000170Cucurbita pepo (Zucchini)cmocpeB620
CmoCh03G000170Bottle gourd (USVL1VR-Ls)cmolsiB585
CmoCh03G000170Bottle gourd (USVL1VR-Ls)cmolsiB589
CmoCh03G000170Cucumber (Gy14) v2cgybcmoB504
CmoCh03G000170Melon (DHL92) v3.6.1cmomedB701
CmoCh03G000170Silver-seed gourdcarcmoB0643
CmoCh03G000170Cucumber (Chinese Long) v3cmocucB0778