CSPI04G19580 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G19580
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description5'-3' exonuclease family protein
LocationChr4 : 17374270 .. 17377273 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACAACAAAGGTACATGCGAATTGGGCAGCGGTTGATGAAACGCTTGGGCTGTTCTCCCTCAGTTCTCATGGCCTCCCACCATCTTCACACTGCTACTGCTAGTGCTTCGCATATTTGCAGAAATTTTTTGGGATTCATTTTCACCTCCAAATTTCCCGATCCTTTTCGCTTCTCTACTTCTTCTTCGAGGATTCATTCTTTTCCTTCGTTCTCCCTTCTGCTATCCCCAAAGGTATCTCTCTTTCTGCTAATTCCTACTTCTTGTTCTTAATTGATTCTGTTATTTACAACCTAACCTACTTTCATAACATTAAGAGCCTCATTACTGGCTGGGTGTTACAGTGTAGATGTGAAATGGGTGAAGTATAATATTCTTGTTGCAAGTGTAGTTCGAGATATCACTTATGAGTAGAATGTGGAAGATGCCCATCATTGGAATGACCTTTTAATTTATTATGTGTACTCTAATTGTAGCGTTTGGTTTTATTCAAAGCAATCTACAACTTTTGCCTTTGTTTTTTGCTGCAGTTTTGACTTTTGTTAAGGAATTTTCTCTGTTTCTCAGGGTTACTGCAGTTCATCCGGAAGTATAAATTCTGCCAATACCATGGATACGGTTCCAACTTATCATGGTAGTTCTGCATCTACTAGATGCCAGCCAATGGTGCAATTCCAAGATTCATTATCGAACCCGCTTACGTTCAAAGAAGATACTGGAATTGATAATCCTGCAGATGCTAGAGTCATGCTCATTGATGGCACATCAATCATTTTTAGAGCATACTACAAGCTTTTGGGTATGTTACACGTGTCAGTCAGAATGCTTTAGTTTTACTTGGTTTGTTATCTTAAGTTCTTATAATGTAGCCTGAATCTTTTATTAGAATGAATAATGTGTTTCATACAAGAAGGCAATACTCCTATTTATAGAGTTTTATTACAAGTGGGGGTAGAAAGGAAACTAACTTAGAATTTTAACTAATTACTCAATTAACCTCTATTCTTCTTACATCATTCTACTCCTCCAAAAAGAAAACTCGTTCGCAAGTTCTATAAAGAAAAAAAGTTATGAAGCAAACAATGAATCAAGTAAACTTGTTCAACGGTGTGTAGACTAAAGAGTTTCGGAGAAATCTTGGAAGAATTTTGGAGTAGGAATTTTATTAATTGTGCATACATGGGGGAAAACTCCTATTTATAGAGTTTAGTACATGTGGGGTAAAAAGGGAACTAACTTAGACTTTTATCCAATTACCCAATTAGCTCCATTCTTATTTACATCGTCATAACATATATTTTCAATTTGTATTTTCACTGGAATGGTTTATGTGCCAAGAGGATGATTGATAACAGAAAAGTGGTCCACTTAAACCCGTTGGTAAAGATAAGTAGACGTTAAATTCTGACCATTTATATTTTGTTGTTAAGAAACACAAACGAACTTCATTAATAGAAAACAAGATATGCAAAAAGGGAGACGAGATCTCCCAGGAACGGGGGGGTTACAAAAAGGATCCCCAATAGGCATTAATTTGCATCAAATTAAAATTAGAGATCTGGGGGAGCAAAGTACGCCATGTTGATGAAACAATCTAGCTAGCTCTCTGCATTCATCATGAGAGGATTGACTGCCTTAAAAAGTCCTCTTGTTACCCATAAAAGCACTGCCACTGAATTGAATCATAACACTCTAGCTTTGCCCCCCCAAAAAAGAAGTCCCATAAATTAACTGAAAACAAGTTAAATCCTCCAAACATCCAGCTTAAGTGCATGTTTGGATTGACTTTCTAAATGTTTAAAAAAGTGTTTATAAGTGCAAAAGAAAAAGTTTTTATAAACATTTAGAAAGTCAATCGAAATGCATCCTAAATTTAAGATTTGGAAAAGACTGGATCAACCCAAAGGAACATACGTTTTTACAATATTTACTTCATTGATTTAATTTGTTTGATTGGATTTTTGTCGTGGGAGCAGCAAAGCTTCATCATGGACATTTATCACATGCGGATGGAAATGGAGATTGGGTGCTAACAATATTTACTGCTTTGTCACTTGTAAGTAACATTCTTATTAGGTTCTGGTTTTAAAATGTTATTTGCTATTGTTTTCCAACAATGATAGATATTCTACTAATAATGATTCAAACCTTGGTGTTATCATTCCTCTTATGCTCATCTCTGTTATTGTTTGCTATGAATTAATTTATGTAAAATATTACAATAAAAGATTGGATATCAATTTTCGTCACTTCTTGTTTCTGATTAAAAATAAAGAAATTCTGATACAATTAAATTTGTGGCATTGATACTACTGAAAATAATAATTTTAACTTCATTTTTTCTGTTGGATTTCGCTTTTTTAGCTTGTTCTTTGCGTTTGTTTGTTTTGGTCGTTTCCCTTGTATTGGCCGAGATCATCTTTGGGCAGTTTGTTTGGATGTTTTTGTCTTTTCTTTTTTTGCTCTTTGTATAATTCTCTTGTACTTTGAGCATTAGTCTCATTTTCCTTTATTAATAAAGAAACTTGTCTTCGTTTCAAAAAGAAAAAAAGAAGAAAATAATAATTTTTGTGTTTTCTTCATTGAGAAGGAAGAGGTTTCTTATTATTTAAAATCTTTTTTTGTCACCCAAGGAAGAGGTTTCTTAAATAAAAGAATATGTTGTCAGTTTGTCAATCAAATTATTGAATTGTCACTTTGGAAAACCAAAAGGTAAGTTCTCTCCCCTCTATCCTCTCTTCTCTCTCGTCCCCTTTTCAGTAGCCGGGTTCTTTAGCAGACCCTTTCAATAAGTCTCAAAGCACAACATGGAGGTTATCAGTTGCAAAATCGATCAGTCACACTACTGCATTTGGAAAGAGGAAAATTGCAGTTTTATTAAAGATGTAGTAGCCAGCAGAAGCATTTCTCTTTCCTATAGTCAACTTAGATGGGCTCAGTCAGTAATATTTGACTTACACAGAACTCCGGTGGACAGTCATTTCAGGAAATTCGGGGACATTGA

mRNA sequence

ATGCGAATTGGGCAGCGGTTGATGAAACGCTTGGGCTGTTCTCCCTCAGTTCTCATGGCCTCCCACCATCTTCACACTGCTACTGCTAGTGCTTCGCATATTTGCAGAAATTTTTTGGGATTCATTTTCACCTCCAAATTTCCCGATCCTTTTCGCTTCTCTACTTCTTCTTCGAGGATTCATTCTTTTCCTTCGTTCTCCCTTCTGCTATCCCCAAAGGGTTACTGCAGTTCATCCGGAAGTATAAATTCTGCCAATACCATGGATACGGTTCCAACTTATCATGGTAGTTCTGCATCTACTAGATGCCAGCCAATGGTGCAATTCCAAGATTCATTATCGAACCCGCTTACGTTCAAAGAAGATACTGGAATTGATAATCCTGCAGATGCTAGAGTCATGCTCATTGATGGCACATCAATCATTTTTAGAGCATACTACAAGCTTTTGGCAAAGCTTCATCATGGACATTTATCACATGCGGATGGAAATGGAGATTGGGTGCTAACAATATTTACTGCTTTGTCACTTCCGGGTTCTTTAGCAGACCCTTTCAATAAGTCTCAAAGCACAACATGGAGGTTATCAGTTGCAAAATCGATCAGTCACACTACTGCATTTGGAAAGAGGAAAATTGCAAACTCCGGTGGACAGTCATTTCAGGAAATTCGGGGACATTGA

Coding sequence (CDS)

ATGCGAATTGGGCAGCGGTTGATGAAACGCTTGGGCTGTTCTCCCTCAGTTCTCATGGCCTCCCACCATCTTCACACTGCTACTGCTAGTGCTTCGCATATTTGCAGAAATTTTTTGGGATTCATTTTCACCTCCAAATTTCCCGATCCTTTTCGCTTCTCTACTTCTTCTTCGAGGATTCATTCTTTTCCTTCGTTCTCCCTTCTGCTATCCCCAAAGGGTTACTGCAGTTCATCCGGAAGTATAAATTCTGCCAATACCATGGATACGGTTCCAACTTATCATGGTAGTTCTGCATCTACTAGATGCCAGCCAATGGTGCAATTCCAAGATTCATTATCGAACCCGCTTACGTTCAAAGAAGATACTGGAATTGATAATCCTGCAGATGCTAGAGTCATGCTCATTGATGGCACATCAATCATTTTTAGAGCATACTACAAGCTTTTGGCAAAGCTTCATCATGGACATTTATCACATGCGGATGGAAATGGAGATTGGGTGCTAACAATATTTACTGCTTTGTCACTTCCGGGTTCTTTAGCAGACCCTTTCAATAAGTCTCAAAGCACAACATGGAGGTTATCAGTTGCAAAATCGATCAGTCACACTACTGCATTTGGAAAGAGGAAAATTGCAAACTCCGGTGGACAGTCATTTCAGGAAATTCGGGGACATTGA
Homology
[Close]
BLAST of CSPI04G19580 vs. TrEMBL
Match: A0A0A0KYZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G442580 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.2e-92
Identity = 171/178 (96.07%), Postives = 174/178 (97.75%), Query Frame = 1 

Query: 4   GQRLMKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPDPFRFSTSSSRIHSF 63
           G RL+KRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFP PFRFSTSSSRIHSF
Sbjct: 81  GIRLLKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRIHSF 140

Query: 64  PSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDT 123
           PSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDT
Sbjct: 141 PSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDT 200

Query: 124 GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLPGSL 182
           GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL  ++
Sbjct: 201 GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLVSNI 258

[Close]
BLAST of CSPI04G19580 vs. TrEMBL
Match: W9RHS6_9ROSA (DNA polymerase I OS=Morus notabilis GN=L484_018134 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-21
Identity = 71/163 (43.56%), Postives = 93/163 (57.06%), Query Frame = 1 

Query: 26  TATASASHICRNFLGFIFTSKFPDPFRFSTSSSRIHSF---------PSFSLLLSPKGYC 85
           ++++S+S  C           F     FSTS    +SF         P+ SL    +GY 
Sbjct: 7   SSSSSSSSSCLQLCFHSIRRLFSSSRSFSTSPRIFYSFLNKPPLLLHPALSLSRKFQGYY 66

Query: 86  SSSGSINSANTMDTVP--TYHGSSASTRCQPMVQFQDSLSNPLTFKEDTGIDNPADARVM 145
             S  +NS      +P   Y   +A++  +      D+L   L+ +E    DNP+D R+M
Sbjct: 67  VESNGLNSV-----LPGVVYGERNATSYAKATFLHHDAL---LSSEERAVNDNPSDGRLM 126

Query: 146 LIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           LIDGTSII+RAYYKLLAKLHHG+LSHADGNGDWVLT+FTALSL
Sbjct: 127 LIDGTSIIYRAYYKLLAKLHHGYLSHADGNGDWVLTVFTALSL 161

[Close]
BLAST of CSPI04G19580 vs. TrEMBL
Match: A0A061EQX7_THECC (5\'-3\' exonuclease family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_019883 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-20
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 1 

Query: 58  SRIHSFPSFSLLLSP-----KGYCSSSGSINSANTMDTVP-----TYHGSSASTRCQPMV 117
           + + SF  F ++  P     KGYCS S ++N      T+P     T HG++  +  +  +
Sbjct: 33  NNLPSFKKFYVIRPPPCQTIKGYCSLSYTLN------TLPGARHATSHGNAVISSKKEQL 92

Query: 118 QFQDSLSNPLTFKEDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDW 177
             Q++  +    +E     N ++ RVMLIDGTS+I+RAYYKLLAKLHHG+LSHADGNGDW
Sbjct: 93  LHQEAALDTSNLQERVVNANYSNNRVMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDW 152

[Close]
BLAST of CSPI04G19580 vs. TrEMBL
Match: A0A061EJA7_THECC (5\'-3\' exonuclease family protein isoform 1 OS=Theobroma cacao GN=TCM_019883 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-20
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 1 

Query: 58  SRIHSFPSFSLLLSP-----KGYCSSSGSINSANTMDTVP-----TYHGSSASTRCQPMV 117
           + + SF  F ++  P     KGYCS S ++N      T+P     T HG++  +  +  +
Sbjct: 33  NNLPSFKKFYVIRPPPCQTIKGYCSLSYTLN------TLPGARHATSHGNAVISSKKEQL 92

Query: 118 QFQDSLSNPLTFKEDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDW 177
             Q++  +    +E     N ++ RVMLIDGTS+I+RAYYKLLAKLHHG+LSHADGNGDW
Sbjct: 93  LHQEAALDTSNLQERVVNANYSNNRVMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDW 152

[Close]
BLAST of CSPI04G19580 vs. TrEMBL
Match: A0A0D2NBI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G123800 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-20
Identity = 56/105 (53.33%), Postives = 72/105 (68.57%), Query Frame = 1 

Query: 73  KGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDTGIDNPADAR 132
           K YCS SG+++S    D  P  HG++  +  +  +  Q++       +E       ++ R
Sbjct: 53  KQYCSLSGNLSSTVPGDH-PIPHGNAVISSKKEQIFHQEAALGRANLQETVVNAKSSNGR 112

Query: 133 VMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           VMLIDGTS+I+RAYYKLLAKLHHG+LSHADGNGDWVLTIFTALSL
Sbjct: 113 VMLIDGTSVIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFTALSL 156

[Close]
BLAST of CSPI04G19580 vs. TAIR10
Match: AT3G52050.3 (AT3G52050.3 5'-3' exonuclease family protein)

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-18
Identity = 58/119 (48.74%), Postives = 71/119 (59.66%), Query Frame = 1 

Query: 62  SFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKE 121
           S  S SL  S K YCSS      +N   +  T    S     Q       S+  P  FK 
Sbjct: 54  SLISPSLARSAKYYCSSVAVSEFSNEAASGSTLTSISEDVTPQ-------SIKYP--FKS 113

Query: 122 DTGIDNPA---DARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           +  + + A   + RVMLIDGTSII+RAYYKLLA+L+HGHL+HADGN DWVLTIF++LSL
Sbjct: 114 EERVASTAASSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSL 163

[Close]
BLAST of CSPI04G19580 vs. NCBI nr
Match: gi|449453197|ref|XP_004144345.1| (PREDICTED: uncharacterized protein LOC101222649 isoform X1 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-94
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 1 

Query: 1   MRIGQRLMKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPDPFRFSTSSSRI 60
           MRIGQRL+KRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFP PFRFSTSSSRI
Sbjct: 1   MRIGQRLLKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRI 60

Query: 61  HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK 120
           HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK
Sbjct: 61  HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK 120

Query: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL
Sbjct: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 177

[Close]
BLAST of CSPI04G19580 vs. NCBI nr
Match: gi|778694790|ref|XP_011653865.1| (PREDICTED: uncharacterized protein LOC101222649 isoform X2 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-94
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 1 

Query: 1   MRIGQRLMKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPDPFRFSTSSSRI 60
           MRIGQRL+KRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFP PFRFSTSSSRI
Sbjct: 1   MRIGQRLLKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRI 60

Query: 61  HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK 120
           HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK
Sbjct: 61  HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK 120

Query: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL
Sbjct: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 177

[Close]
BLAST of CSPI04G19580 vs. NCBI nr
Match: gi|700199585|gb|KGN54743.1| (hypothetical protein Csa_4G442580 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 3.1e-92
Identity = 171/178 (96.07%), Postives = 174/178 (97.75%), Query Frame = 1 

Query: 4   GQRLMKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPDPFRFSTSSSRIHSF 63
           G RL+KRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFP PFRFSTSSSRIHSF
Sbjct: 81  GIRLLKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPHPFRFSTSSSRIHSF 140

Query: 64  PSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDT 123
           PSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDT
Sbjct: 141 PSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFKEDT 200

Query: 124 GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLPGSL 182
           GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL  ++
Sbjct: 201 GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLVSNI 258

[Close]
BLAST of CSPI04G19580 vs. NCBI nr
Match: gi|659069413|ref|XP_008449686.1| (PREDICTED: uncharacterized protein LOC103491482 isoform X2 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84
Identity = 164/177 (92.66%), Postives = 168/177 (94.92%), Query Frame = 1 

Query: 1   MRIGQRLMKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPDPFRFSTSSSRI 60
           MRIGQRLMKRLG SPS LMASHHLHTATASASHICRNFLGF+FTSKFP PFRFSTSSSRI
Sbjct: 1   MRIGQRLMKRLGGSPSRLMASHHLHTATASASHICRNFLGFVFTSKFPVPFRFSTSSSRI 60

Query: 61  HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK 120
           HSFPS SLLLSPKGYCSSSGSINS+N +DT+ TYHGSSASTR Q MVQFQDSLSN LTFK
Sbjct: 61  HSFPS-SLLLSPKGYCSSSGSINSSNIIDTIATYHGSSASTRRQSMVQFQDSLSNSLTFK 120

Query: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL
Sbjct: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 176

[Close]
BLAST of CSPI04G19580 vs. NCBI nr
Match: gi|659069411|ref|XP_008449676.1| (PREDICTED: uncharacterized protein LOC103491482 isoform X1 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84
Identity = 164/177 (92.66%), Postives = 168/177 (94.92%), Query Frame = 1 

Query: 1   MRIGQRLMKRLGCSPSVLMASHHLHTATASASHICRNFLGFIFTSKFPDPFRFSTSSSRI 60
           MRIGQRLMKRLG SPS LMASHHLHTATASASHICRNFLGF+FTSKFP PFRFSTSSSRI
Sbjct: 1   MRIGQRLMKRLGGSPSRLMASHHLHTATASASHICRNFLGFVFTSKFPVPFRFSTSSSRI 60

Query: 61  HSFPSFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSASTRCQPMVQFQDSLSNPLTFK 120
           HSFPS SLLLSPKGYCSSSGSINS+N +DT+ TYHGSSASTR Q MVQFQDSLSN LTFK
Sbjct: 61  HSFPS-SLLLSPKGYCSSSGSINSSNIIDTIATYHGSSASTRRQSMVQFQDSLSNSLTFK 120

Query: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 178
           EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL
Sbjct: 121 EDTGIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 176

The following BLAST results are available for this feature:
BLAST of CSPI04G19580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G19580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYZ2_CUCSA2.2e-9296.07Uncharacterized protein OS=Cucumis sativus GN=Csa_4G442580 PE=4 SV=1[more]
W9RHS6_9ROSA4.5e-2143.56DNA polymerase I OS=Morus notabilis GN=L484_018134 PE=4 SV=1[more]
A0A061EQX7_THECC2.9e-2047.695\'-3\' exonuclease family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TC... [more]
A0A061EJA7_THECC2.9e-2047.695\'-3\' exonuclease family protein isoform 1 OS=Theobroma cacao GN=TCM_019883 PE... [more]
A0A0D2NBI5_GOSRA2.9e-2053.33Uncharacterized protein OS=Gossypium raimondii GN=B456_005G123800 PE=4 SV=1[more]
BLAST of CSPI04G19580 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G52050.33.2e-1848.74 5'-3' exonuclease family protein[more]
BLAST of CSPI04G19580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453197|ref|XP_004144345.1|1.5e-9498.87PREDICTED: uncharacterized protein LOC101222649 isoform X1 [Cucumis sativus][more]
gi|778694790|ref|XP_011653865.1|1.5e-9498.87PREDICTED: uncharacterized protein LOC101222649 isoform X2 [Cucumis sativus][more]
gi|700199585|gb|KGN54743.1|3.1e-9296.07hypothetical protein Csa_4G442580 [Cucumis sativus][more]
gi|659069413|ref|XP_008449686.1|1.4e-8492.66PREDICTED: uncharacterized protein LOC103491482 isoform X2 [Cucumis melo][more]
gi|659069411|ref|XP_008449676.1|1.4e-8492.66PREDICTED: uncharacterized protein LOC103491482 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0022900 electron transport chain
cellular_component GO:0031361 integral component of thylakoid membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G19580.1CSPI04G19580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10133DNA POLYMERASE Icoord: 127..177
score: 2.2
NoneNo IPR availablePANTHERPTHR10133:SF225'-3' EXONUCLEASE FAMILY PROTEINcoord: 127..177
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G19580Csa4G442580Cucumber (Chinese Long) v2cpicuB181
CSPI04G19580ClCG04G002830Watermelon (Charleston Gray)cpiwcgB322
CSPI04G19580CmoCh03G000170Cucurbita moschata (Rifu)cmocpiB673
CSPI04G19580CsGy4G018430Cucumber (Gy14) v2cgybcpiB170
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G19580Wax gourdcpiwgoB403
CSPI04G19580Cucumber (Gy14) v1cgycpiB267
CSPI04G19580Cucurbita maxima (Rimu)cmacpiB673
CSPI04G19580Cucurbita maxima (Rimu)cmacpiB886
CSPI04G19580Cucurbita moschata (Rifu)cmocpiB867
CSPI04G19580Melon (DHL92) v3.5.1cpimeB325
CSPI04G19580Cucurbita pepo (Zucchini)cpecpiB067
CSPI04G19580Cucurbita pepo (Zucchini)cpecpiB492
CSPI04G19580Bottle gourd (USVL1VR-Ls)cpilsiB249
CSPI04G19580Melon (DHL92) v3.6.1cpimedB316
CSPI04G19580Silver-seed gourdcarcpiB0513
CSPI04G19580Silver-seed gourdcarcpiB0552
CSPI04G19580Cucumber (Chinese Long) v3cpicucB212
CSPI04G19580Watermelon (97103) v2cpiwmbB312